S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
1 | spr2046 | spr2019 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr2046 | 1 | 24 | -7.063749 | chromosome segregation protein | |
spr2045 | 0 | 23 | -7.412938 | serine protease | |
spr2044 | 2 | 22 | -8.291172 | rRNA large subunit methyltransferase | |
spr2043 | 1 | 17 | -6.874764 | *competence stimulating peptide | |
spr2042 | 1 | 17 | -6.159394 | sensor histidine kinase ComD | |
spr2041 | -1 | 18 | -4.526944 | response regulator | |
spr2040 | -1 | 19 | -4.270331 | **hypothetical protein | |
spr2036 | -1 | 18 | -4.033331 | ABC transporter permease | |
spr2035 | -1 | 19 | -3.028003 | ABC transporter ATP-binding protein | |
spr2034 | -1 | 21 | -3.910771 | tryptophanyl-tRNA synthetase II | |
spr2033 | -1 | 22 | -4.454928 | inosine 5'-monophosphate dehydrogenase | |
spr2032 | -1 | 25 | -5.965352 | recombination protein F | |
spr2031 | -2 | 25 | -5.188992 | hypothetical protein | |
spr2030 | -3 | 25 | -4.490940 | hypothetical protein | |
spr2029 | -2 | 26 | -3.770569 | hypothetical protein | |
spr2028 | -3 | 24 | -3.330209 | hypothetical protein | |
spr2027 | -2 | 24 | -3.413159 | CDP-diacylglycerol--glycerol-3-phosphate | |
spr2026 | -1 | 24 | -2.580754 | cobalt transporter ATP-binding subunit | |
spr2025 | 2 | 22 | -2.126883 | cobalt transporter ATP-binding subunit | |
spr2024 | 6 | 25 | -1.920250 | ABC transporter permease | |
spr2023 | 6 | 27 | -1.759654 | rod shape-determining protein MreC | |
spr2022 | 6 | 31 | -0.749712 | rod shpae-determining protein MreD | |
spr2021 | 7 | 32 | -0.030168 | general stress protein GSP-781 | |
spr2020 | 2 | 20 | 0.075942 | 30S ribosomal protein S2 | |
spr2019 | 2 | 15 | -0.738631 | elongation factor Ts |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2045 | V8PROTEASE | 61 | 1e-12 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2044 | 56KDTSANTIGN | 28 | 0.023 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2040 | HTHTETR | 48 | 3e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2035 | PF05272 | 32 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2021 | GPOSANCHOR | 49 | 2e-08 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
2 | spr1975 | spr1941 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1975 | 0 | 19 | -3.547107 | zinc ABC transporter substrate-binding protein | |
spr1974 | 2 | 28 | -6.071301 | fucose operon repressor | |
spr1973 | 1 | 29 | -5.457515 | fucose kinase | |
spr1972 | 2 | 30 | -5.761724 | L-fuculose phosphate aldolase | |
spr1971 | 4 | 31 | -6.691386 | fucose pathway protein | |
spr1970 | 3 | 31 | -6.563468 | PTS system transporter subunit IIA | |
spr1969 | 3 | 28 | -4.948498 | PTS system transporter subunit IIB | |
spr1968 | 2 | 25 | -4.132496 | PTS system transporter subunit IIC | |
spr1967 | 1 | 22 | -3.664188 | PTS system transporter subunit IID | |
spr1966 | 1 | 22 | -3.657285 | hypothetical protein | |
spr1965 | 0 | 16 | -1.480678 | fucolectin-related protein | |
spr1964 | 0 | 13 | 1.564490 | L-fucose isomerase | |
spr1963 | -2 | 15 | 1.479474 | iron-containing alcohol dehydrogenase | |
spr1962 | -1 | 21 | 1.677518 | hypothetical protein | |
spr1961 | -3 | 16 | 2.718382 | hypothetical protein | |
spr1960 | -2 | 18 | 3.965975 | hypothetical protein | |
spr1959 | -2 | 16 | 4.152167 | hypothetical protein | |
spr1958 | -1 | 17 | 4.481368 | carbamate kinase | |
spr1957 | -1 | 19 | 4.963645 | ornithine carbamoyltransferase | |
spr1954 | -1 | 22 | 5.378635 | hypothetical protein | |
spr1953 | 0 | 22 | 4.943924 | hypothetical protein | |
spr1952 | 0 | 18 | 4.031401 | hypothetical protein | |
spr1951 | -1 | 15 | 0.907387 | hypothetical protein | |
spr1950 | -1 | 17 | -0.645724 | ROK family protein | |
spr1949 | 1 | 20 | -1.719280 | glycosyl hydrolase-like protein | |
spr1947 | 3 | 30 | -5.332013 | tranposase | |
spr1946 | 3 | 28 | -4.168360 | hypothetical protein | |
spr1945 | 1 | 26 | -5.569028 | choline binding protein PcpA | |
spr1944 | -1 | 22 | -4.471263 | 50S ribosomal protein L33 | |
spr1943 | 0 | 24 | -4.454035 | 50S ribosomal protein L32 | |
spr1942 | 0 | 26 | -4.826845 | hypothetical protein | |
spr1941 | 0 | 27 | -5.063119 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1975 | ADHESNFAMILY | 251 | 5e-82 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1959 | RTXTOXINA | 37 | 2e-04 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1958 | CARBMTKINASE | 406 | e-146 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. |
3 | spr1920 | spr1897 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1920 | 2 | 41 | 0.632355 | maltodextrin ABC transporter permease | |
spr1919 | 2 | 42 | 0.089596 | maltodextrin ABC transporter permease | |
spr1918 | 3 | 39 | 0.149815 | maltose/maltodextrin ABC transporter | |
spr1917 | 2 | 36 | -0.169631 | 4-alpha-glucanotransferase | |
spr1916 | 1 | 21 | -1.758955 | maltodextrin phosphorylase | |
spr1915 | 0 | 14 | -1.593019 | hypothetical protein | |
spr1914 | -1 | 9 | 0.089579 | hypothetical protein | |
spr1913 | -1 | 10 | 0.402151 | rRNA (guanine-N1-)-methyltransferase | |
spr1912 | -1 | 9 | 0.774735 | hypothetical protein | |
spr1911 | -2 | 11 | 1.730030 | metal/cation transporter P-type ATPase | |
spr1910 | -2 | 12 | 3.115787 | tyrosyl-tRNA synthetase | |
spr1909 | -1 | 16 | 3.027526 | penicillin-binding protein 1B | |
spr1908 | -3 | 13 | 3.304114 | hypothetical protein | |
spr1907 | -3 | 14 | 3.755122 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate | |
spr1906 | -3 | 13 | 2.293705 | hypothetical protein | |
spr1905 | -1 | 14 | 0.860179 | 5-formyltetrahydrofolate cyclo-ligase | |
spr1904 | -1 | 15 | 0.308573 | hypothetical protein | |
spr1903 | -1 | 17 | -0.191897 | UTP-glucose-1-phosphate uridylyltransferase | |
spr1902 | 2 | 19 | -0.677460 | NAD(P)H-dependent glycerol-3-phosphate | |
spr1901 | 2 | 21 | -1.488047 | transcriptional regulator | |
spr1899 | 3 | 21 | -0.207636 | phosphate transporter PhoU | |
spr1898 | 2 | 20 | -0.097796 | phosphate transporter ATP-binding protein | |
spr1897 | 2 | 19 | 0.087075 | phosphate ABC transporter permease |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1918 | MALTOSEBP | 136 | 3e-38 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1908 | TCRTETA | 31 | 0.007 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1901 | INVEPROTEIN | 28 | 0.022 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) |
4 | spr1822 | spr1792 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1822 | 1 | 18 | -3.573500 | 50S ribosomal protein L33 | |
spr1821 | 0 | 15 | -3.151742 | preprotein translocase subunit SecE | |
spr1820 | -1 | 16 | -2.635765 | transcription antitermination protein NusG | |
spr1819 | -1 | 18 | -1.007474 | competence-specific global transcription | |
spr1818 | -3 | 15 | -0.538398 | ***********hypothetical protein | |
spr1817 | -2 | 15 | -0.254419 | ABC transporter ATP-binding protein | |
spr1816 | -2 | 13 | 1.107377 | hypothetical protein | |
spr1815 | -3 | 14 | 1.937823 | sensor histidine kinase | |
spr1814 | -2 | 14 | 3.013600 | DNA-binding response regulator | |
spr1813 | -3 | 13 | 2.204545 | catabolite control protein A | |
spr1812a | -2 | 17 | 3.167332 | hypothetical protein | |
spr1812 | -1 | 16 | 3.210764 | L-asparaginase | |
spr1811 | -3 | 13 | 2.794889 | Cof family protein | |
spr1810 | -1 | 14 | 3.133950 | hypothetical protein | |
spr1809 | -1 | 16 | 3.633802 | hypothetical protein | |
spr1808 | -1 | 15 | 2.063545 | aminotransferase | |
spr1807 | 1 | 19 | 1.872242 | 50S ribosomal protein L34 | |
spr1806 | 1 | 19 | 1.413644 | cell wall surface anchor family protein | |
spr1805 | 0 | 21 | 1.044281 | hypothetical protein | |
spr1804 | -1 | 21 | 1.263945 | primase-related protein | |
spr1803 | -1 | 18 | 1.010852 | transcriptional regulator PlcR | |
spr1802 | -2 | 18 | 2.753318 | hypothetical protein | |
spr1801 | -1 | 22 | 3.023197 | ABC transporter ATP-binding protein | |
spr1800 | -3 | 22 | 4.213529 | hypothetical protein | |
spr1799 | -3 | 22 | 4.480372 | dimethyladenosine transferase | |
spr1798 | -2 | 19 | 3.832227 | ribosome-associated GTPase | |
spr1797 | -1 | 20 | 4.120565 | ribulose-phosphate 3-epimerase | |
spr1796 | -1 | 20 | 4.021769 | hypothetical protein | |
spr1795 | -1 | 19 | 3.930590 | hypothetical protein | |
spr1794 | -2 | 19 | 3.513310 | cmp-binding-factor 1 | |
spr1793 | -2 | 15 | 2.968901 | pur operon repressor | |
spr1792 | -2 | 13 | 3.082265 | diaminopimelate decarboxylase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1817 | PF05272 | 31 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1815 | PF06580 | 38 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1814 | HTHFIS | 73 | 3e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1813 | MALTOSEBP | 29 | 0.025 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1806 | GPOSANCHOR | 33 | 9e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1797 | FLGHOOKAP1 | 28 | 0.027 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. |
5 | spr1781a | spr1764 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1781a | 2 | 18 | 2.823601 | hypothetical protein | |
spr1781 | 3 | 24 | 3.982975 | UDP-N-acetylglucosamine | |
spr1780 | 4 | 26 | 3.600641 | hypothetical protein | |
spr1779 | 4 | 24 | 3.491152 | DNA-entry nuclease | |
spr1778 | 4 | 24 | 3.196801 | hemolysin | |
spr1777 | 3 | 22 | 1.350800 | *DNA-directed RNA polymerase subunit beta | |
spr1776 | 1 | 16 | -2.719613 | DNA-directed RNA polymerase subunit beta' | |
spr1775 | 1 | 28 | -8.839012 | nucleoside diphosphate kinase | |
spr1773 | 2 | 30 | -9.530180 | ABC transporter ATP-binding protein | |
spr1772 | 3 | 33 | -10.838656 | hypothetical protein | |
spr1771 | 4 | 35 | -11.604568 | subtilisin-like serine protease | |
spr1770 | 3 | 34 | -11.420957 | toxin secretion ABC transporter | |
spr1769 | 4 | 32 | -10.930234 | hypothetical protein | |
spr1768 | 3 | 31 | -9.907516 | hypothetical protein | |
spr1767 | 1 | 26 | -9.397170 | bacteriocin formation protein | |
spr1766 | 1 | 17 | -5.293842 | hypothetical protein | |
spr1765 | 1 | 19 | -4.122763 | hypothetical protein | |
spr1764 | 0 | 18 | -3.719621 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1771 | SUBTILISIN | 130 | 1e-35 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1770 | HTHFIS | 30 | 0.037 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
6 | spr1728 | spr1719 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1728 | 1 | 17 | 3.391804 | hypothetical protein | |
spr1727 | 3 | 17 | 3.522694 | hypothetical protein | |
spr1726 | 2 | 15 | 1.980789 | hypothetical protein | |
spr1725 | 1 | 15 | 0.783226 | oxidoreductase | |
spr1724 | 2 | 17 | -0.304938 | single-stranded DNA-binding protein | |
spr1723 | 1 | 14 | -1.330214 | co-chaperonin GroES | |
spr1722 | 0 | 11 | -1.944448 | molecular chaperone GroEL | |
spr1721 | 2 | 16 | -4.266926 | transposase | |
spr1720 | 1 | 21 | -4.432308 | hypothetical protein | |
spr1719 | 1 | 22 | -3.655664 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1725 | DHBDHDRGNASE | 94 | 5e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
7 | spr1698 | spr1685 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1698 | 0 | 16 | 3.019399 | dextran glucosidase | |
spr1697 | -1 | 21 | 3.771062 | hypothetical protein | |
spr1696 | 0 | 27 | 4.380906 | glutamate racemase | |
spr1695 | 2 | 26 | 3.688529 | fused deoxyribonucleotide triphosphate | |
spr1694 | 1 | 30 | 4.393558 | hypothetical protein | |
spr1693 | 1 | 31 | 3.980863 | hypothetical protein | |
spr1692 | 2 | 25 | 3.402594 | site-specific tyrosine recombinase XerD-like | |
spr1691 | 0 | 25 | 3.822097 | segregation and condensation protein A | |
spr1690 | 1 | 27 | 3.385021 | segregation and condensation protein B | |
spr1689 | 1 | 31 | 3.745311 | ribosomal large subunit pseudouridine synthase | |
spr1688 | 1 | 32 | 2.990834 | hypothetical protein | |
spr1687 | -1 | 27 | 3.456404 | iron-compound ABC transporter substrate-binding | |
spr1686 | 0 | 26 | 3.690549 | iron-compound ABC transporter ATP-binding | |
spr1685 | -1 | 22 | 3.196736 | iron-compound ABC transporter permease |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1687 | FERRIBNDNGPP | 54 | 2e-10 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. |
8 | spr1553 | spr1526 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1553 | -1 | 15 | -4.184355 | GTP-binding protein EngA | |
spr1552 | -1 | 23 | -7.527520 | hypothetical protein | |
spr1551 | 0 | 24 | -7.698826 | hypothetical protein | |
spr1550 | 1 | 25 | -7.378551 | hypothetical protein | |
spr1549 | 0 | 13 | -2.311963 | hypothetical protein | |
spr1548 | -1 | 14 | -1.613552 | hypothetical protein | |
spr1547 | -1 | 16 | 0.061277 | hypothetical protein | |
spr1546 | 0 | 18 | 1.291363 | ABC transporter ATP-binding protein | |
spr1545 | 0 | 16 | 2.953567 | hypothetical protein | |
spr1544 | -1 | 15 | 3.813376 | preprotein translocase subunit SecA | |
spr1543 | 0 | 19 | 4.358691 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
spr1542 | 0 | 22 | 4.496491 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
spr1541 | -1 | 16 | 3.622410 | 4'-phosphopantetheinyl transferase | |
spr1540 | -1 | 14 | 2.979629 | alanine racemase | |
spr1539 | -1 | 11 | 1.417056 | ATP-dependent DNA helicase RecG | |
spr1538 | -1 | 12 | -0.572875 | acetyl xylan esterase | |
spr1537 | -2 | 17 | -1.757188 | hypothetical protein | |
spr1536 | -1 | 20 | -2.857376 | neuraminidase A | |
spr1535 | 0 | 26 | -4.832917 | hypothetical protein | |
spr1534 | -1 | 24 | -4.029413 | ABC transporter substrate-binding protein | |
spr1533 | 0 | 25 | -3.867453 | ABC transporter permease | |
spr1532 | -1 | 24 | -3.279284 | ABC transporter permease | |
spr1531 | -1 | 21 | -2.842335 | neuraminidase B | |
spr1530 | 0 | 22 | -0.793272 | hypothetical protein | |
spr1529 | 1 | 22 | -0.854041 | N-acetylmannosamine-6-phosphate 2-epimerase | |
spr1528 | 1 | 22 | -1.374733 | PTS system transporter subunit IIBC | |
spr1527 | 1 | 24 | -0.369375 | sugar ABC transporter substrate-binding protein | |
spr1526 | 2 | 16 | 0.322306 | sugar ABC transporter permease |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1553 | TCRTETOQM | 38 | 9e-05 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1544 | SECA | 1053 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1541 | ENTSNTHTASED | 27 | 0.017 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1540 | ALARACEMASE | 349 | e-121 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1536 | GPOSANCHOR | 38 | 2e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1534 | MALTOSEBP | 33 | 0.003 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1528 | PREPILNPTASE | 33 | 0.003 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1527 | MALTOSEBP | 30 | 0.026 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
9 | spr1494 | spr1453 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1494 | -3 | 19 | 3.035102 | manganese ABC transporter substrate-binding | |
spr1493 | -2 | 20 | 3.788629 | manganese ABC transporter permease | |
spr1492 | -2 | 19 | 3.660916 | manganese ABC transporter ATP-binding protein | |
spr1491 | -2 | 19 | 3.047145 | endopeptidase O | |
spr1490 | 0 | 20 | 2.003335 | metallo-beta-lactamase superfamily protein | |
spr1487 | -2 | 23 | 1.572716 | GTP pyrophosphokinase | |
spr1486 | 3 | 24 | 0.248496 | D-tyrosyl-tRNA(Tyr) deacylase | |
spr1484 | 2 | 26 | 0.580574 | hypothetical protein | |
spr1483 | 2 | 26 | 0.151203 | hypothetical protein | |
spr1481 | 2 | 25 | 1.598918 | hypothetical protein | |
spr1480 | 2 | 26 | 2.294348 | iron-dependent transcriptional regulator | |
spr1479 | 2 | 24 | 1.711570 | hypothetical protein | |
spr1477 | -2 | 21 | 2.137977 | Rrf2 family protein | |
spr1476 | -2 | 17 | 1.278518 | hypothetical protein | |
spr1475 | -1 | 19 | 1.867969 | hypothetical protein | |
spr1474 | 0 | 19 | 1.226032 | DNA-binding response regulator | |
spr1473 | 0 | 21 | 1.149502 | sensor histidine kinase | |
spr1472 | -1 | 18 | 2.979445 | threonyl-tRNA synthetase | |
spr1468 | -2 | 15 | 2.386439 | hypothetical protein | |
spr1467 | -1 | 20 | 3.400256 | 30S ribosomal protein S15 | |
spr1466 | 0 | 21 | 3.835978 | cadmium resistance protein | |
spr1465 | 0 | 20 | 4.307840 | hypothetical protein | |
spr1464 | 1 | 19 | 4.328556 | metal cation transporter P-type ATPase | |
spr1463 | 0 | 16 | 3.159446 | hypothetical protein | |
spr1462 | 0 | 15 | 3.181808 | hypothetical protein | |
spr1461 | 0 | 13 | 2.864494 | hypothetical protein | |
spr1460 | -2 | 11 | 2.009820 | UDP-glucose 4-epimerase | |
spr1459 | 0 | 13 | 0.989356 | glycosil transferase | |
spr1458 | 1 | 15 | 1.017896 | ferredoxin | |
spr1457 | 0 | 17 | 1.682493 | hypothetical protein | |
spr1456 | 0 | 19 | 1.479927 | cytidylate kinase | |
spr1455 | 2 | 20 | 1.394343 | hypothetical protein | |
spr1454 | 3 | 20 | 0.522111 | hypothetical protein | |
spr1453 | 2 | 22 | 0.495108 | major facilitator transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1494 | ADHESNFAMILY | 448 | e-162 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1474 | HTHFIS | 78 | 7e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1468 | NUCEPIMERASE | 27 | 0.041 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1460 | NUCEPIMERASE | 181 | 9e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1456 | PF05272 | 29 | 0.013 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
10 | spr1415 | spr1397 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1415 | -1 | 16 | 3.038036 | hypothetical protein | |
spr1414 | -1 | 15 | 2.837255 | dihydrodipicolinate reductase | |
spr1413 | -1 | 16 | 2.717974 | tRNA CCA-pyrophosphorylase | |
spr1412 | -3 | 16 | 2.498634 | ABC transporter ATP-binding protein | |
spr1411 | -3 | 16 | 2.267957 | cation efflux family protein | |
spr1410 | -2 | 15 | 2.310617 | calcium transporter P-type ATPase | |
spr1409 | 0 | 14 | -0.958671 | glutathione S-transferase YghU | |
spr1408 | 2 | 20 | 0.690100 | peptide deformylase | |
spr1407 | 2 | 22 | 0.636868 | hypothetical protein | |
spr1406 | 2 | 25 | 0.334089 | hypothetical protein | |
spr1405 | 1 | 22 | 0.914548 | hypothetical protein | |
spr1404 | 1 | 22 | 0.825104 | hypothetical protein | |
spr1403 | 2 | 23 | 2.079008 | hypothetical protein | |
spr1402 | 0 | 16 | 2.529164 | hypothetical protein | |
spr1400 | 0 | 17 | 2.593282 | hypothetical protein | |
spr1399 | 1 | 21 | 3.046182 | aspartate aminotransferase | |
spr1398 | 2 | 20 | 1.320393 | hypothetical protein | |
spr1397 | 3 | 20 | 1.627688 | asparaginyl-tRNA synthetase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1406 | FLGMRINGFLIF | 29 | 6e-04 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1404 | PF05043 | 300 | 1e-98 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1403 | TONBPROTEIN | 52 | 1e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1399 | FLGPRINGFLGI | 29 | 0.028 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. |
11 | spr1376 | spr1362 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1376 | 2 | 18 | 1.898858 | aminotransferase, class II | |
spr1375 | 1 | 15 | 1.741159 | Snf2 family protein | |
spr1374 | 0 | 13 | 0.640372 | hypothetical protein | |
spr1373 | -1 | 13 | 0.168383 | UDP-N-acetylmuramate--L-alanine ligase | |
spr1372 | 2 | 13 | -0.212240 | hypothetical protein | |
spr1371 | 1 | 13 | -0.609679 | hypothetical protein | |
spr1370 | 0 | 11 | -1.441420 | hypothetical protein | |
spr1369 | 1 | 14 | -2.728842 | transcription elongation factor GreA | |
spr1368 | 1 | 15 | -3.747939 | hypothetical protein | |
spr1367 | -1 | 14 | -1.050080 | transposase | |
spr1366 | 1 | 17 | -0.748087 | ATP synthase F0F1 subunit C | |
spr1365 | 1 | 22 | 0.708560 | ATP synthase F0F1 subunit A | |
spr1364 | 2 | 25 | 1.602003 | ATP synthase F0F1 subunit B | |
spr1363 | 3 | 22 | 2.134398 | ATP synthase F0F1 subunit delta | |
spr1362 | 2 | 19 | 2.000215 | ATP synthase F0F1 subunit alpha |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1373 | ACETATEKNASE | 32 | 0.006 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1372 | SACTRNSFRASE | 37 | 9e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1370 | PF03544 | 31 | 0.008 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1368 | SACTRNSFRASE | 37 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
12 | spr1353 | spr1321 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1353 | 2 | 23 | -1.165228 | amino acid ABC transporter amino acid-binding | |
spr1352 | 3 | 28 | -0.487865 | bacterocin transport accessory protein | |
spr1351 | 3 | 28 | 0.205071 | phosphoglucomutase | |
spr1348 | 4 | 32 | 0.188598 | hypothetical protein | |
spr1347 | 3 | 29 | 0.693902 | hypothetical protein | |
spr1346 | 1 | 26 | 0.884461 | hypothetical protein | |
spr1345 | 1 | 21 | 0.998780 | cell wall surface anchor family protein | |
spr1344 | -1 | 18 | 1.177596 | glycerol uptake facilitator protein | |
spr1343 | -1 | 17 | 1.114778 | elongation factor Tu | |
spr1336 | 0 | 11 | 0.748411 | DEAD RNA helicase | |
spr1335 | 1 | 11 | 0.788117 | oxidoreductase | |
spr1333 | -1 | 17 | 1.149056 | peptidoglycan GlcNAc deacetylase | |
spr1332 | 2 | 27 | 1.582208 | hypothetical protein | |
spr1329 | 2 | 26 | 1.795755 | glycyl-tRNA synthetase subunit alpha | |
spr1328 | 3 | 30 | 1.282169 | glycyl-tRNA synthetase subunit beta | |
spr1327 | 2 | 30 | 1.646804 | hypothetical protein | |
spr1326 | 1 | 26 | 1.734524 | oxidoreductase | |
spr1325 | 0 | 18 | 1.418082 | hypothetical protein | |
spr1324 | -1 | 16 | 1.569139 | thiamine biosynthesis protein ApbE | |
spr1323 | 0 | 16 | 1.257932 | NADH oxidase | |
spr1322 | 2 | 14 | 1.753289 | pyridoxal biosynthesis lyase PdxS | |
spr1321 | 2 | 18 | 0.603154 | glutamine amidotransferase subunit PdxT |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1353 | ADHESNFAMILY | 29 | 0.026 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1345 | PERTACTIN | 37 | 4e-05 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1343 | TCRTETOQM | 81 | 2e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1323 | NUCEPIMERASE | 34 | 0.001 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
13 | spr1306 | spr1276 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1306 | 2 | 18 | 0.142688 | Cof family protein | |
spr1305 | -1 | 9 | 0.054863 | hypothetical protein | |
spr1304 | -1 | 9 | 0.283527 | C3-degrading proteinase | |
spr1303 | -2 | 9 | 1.058592 | hypothetical protein | |
spr1302 | -2 | 12 | 1.028954 | hypothetical protein | |
spr1301 | -1 | 17 | 0.818966 | hypothetical protein | |
spr1300 | -2 | 18 | -2.955467 | GMP synthase | |
spr1298 | 4 | 27 | -5.897234 | transposase | |
spr1297 | 5 | 29 | -6.941218 | hypothetical protein | |
spr1296 | 6 | 32 | -7.820280 | hypothetical protein | |
spr1294 | 7 | 35 | -8.395800 | hypothetical protein | |
spr1293 | 6 | 37 | -9.463540 | ABC transporter ATP-binding protein | |
spr1292 | 3 | 29 | -6.800325 | hypothetical protein | |
spr1291 | 1 | 26 | -5.860986 | hypothetical protein | |
spr1290 | 0 | 24 | -6.260998 | ABC transporter ATP-binding protein | |
spr1289 | 0 | 19 | -6.136014 | ABC transporter ATP-binding protein/permease | |
spr1288 | 0 | 15 | -4.777952 | hypothetical protein | |
spr1284 | 0 | 13 | -3.286394 | protease | |
spr1282 | 1 | 17 | -2.308745 | hypothetical protein | |
spr1281 | 1 | 15 | -1.322929 | ABC transporter ATP-binding protein | |
spr1280 | 1 | 17 | 0.731522 | hypothetical protein | |
spr1279 | -2 | 18 | 4.027345 | transcriptional repressor | |
spr1278 | -2 | 18 | 3.736249 | hypothetical protein | |
spr1277 | -2 | 19 | 4.378539 | nicotinate phosphoribosyltransferase | |
spr1276 | -2 | 16 | 3.672161 | NAD synthetase |
14 | spr1236 | spr1189 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1236 | -1 | 19 | 3.562547 | hypothetical protein | |
spr1235 | -1 | 18 | 3.884580 | 3-dehydroquinate dehydratase | |
spr1234 | -1 | 18 | 4.000215 | shikimate 5-dehydrogenase | |
spr1233 | -1 | 15 | 3.978197 | 3-dehydroquinate synthase | |
spr1232 | -1 | 14 | 3.591127 | chorismate synthase | |
spr1231 | -1 | 14 | 2.340440 | prephenate dehydrogenase | |
spr1230 | -1 | 13 | 1.670041 | hypothetical protein | |
spr1229 | 0 | 14 | 0.777840 | 3-phosphoshikimate 1-carboxyvinyltransferase | |
spr1228 | 1 | 17 | -0.831065 | shikimate kinase | |
spr1227 | 1 | 17 | -1.810190 | prephenate dehydratase | |
spr1226 | -1 | 16 | -3.209638 | hypothetical protein | |
spr1225 | 0 | 16 | -3.724547 | licD protein | |
spr1224 | -1 | 13 | -3.044729 | hypothetical protein | |
spr1223 | -1 | 11 | -1.780047 | galactosyl transferase | |
spr1222 | -1 | 12 | -0.690719 | hypothetical protein | |
spr1221 | 0 | 13 | 0.957773 | hypothetical protein | |
spr1220 | 1 | 15 | 2.500648 | adaptor protein | |
spr1219 | 0 | 14 | 2.767063 | homoserine dehydrogenase | |
spr1218 | 1 | 15 | 2.841315 | homoserine kinase | |
spr1217 | 2 | 14 | 2.373393 | bifunctional methionine sulfoxide reductase A/B | |
spr1216 | 2 | 14 | 1.906727 | ABC transporter ATP-binding protein/permease | |
spr1215 | 2 | 15 | 1.269511 | ABC transporter ATP-binding protein/permease | |
spr1214 | 3 | 20 | -0.130934 | chlorohydrolase | |
spr1212 | 7 | 30 | -3.318478 | 50S ribosomal protein L10 | |
spr1211 | -1 | 27 | -5.643825 | 50S ribosomal protein L7/L12 | |
spr1210 | 3 | 33 | -7.644099 | hypothetical protein | |
spr1209 | 3 | 31 | -7.865156 | hypothetical protein | |
spr1208 | 3 | 32 | -9.084655 | hypothetical protein | |
spr1207 | 2 | 33 | -8.927233 | hypothetical protein | |
spr1206 | 2 | 33 | -9.457351 | hypothetical protein | |
spr1205 | 3 | 32 | -9.549417 | hypothetical protein | |
spr1204 | 1 | 28 | -8.834163 | prolyl oligopeptidase | |
spr1203 | 0 | 29 | -8.949380 | drug efflux ABC transporter | |
spr1202 | 0 | 28 | -8.096838 | ABC transporter ATP-binding protein | |
spr1201 | 0 | 29 | -8.237853 | hypothetical protein | |
spr1199 | -2 | 30 | -6.552095 | hypothetical protein | |
spr1196 | -2 | 30 | -6.489501 | N-acetylmannosamine-6-phosphate 2-epimerase | |
spr1195 | -2 | 33 | -7.232773 | hypothetical protein | |
spr1194 | 0 | 34 | -7.295337 | oligopeptide ABC transporter substrate-binding | |
spr1193 | 2 | 32 | -6.525345 | peptide ABC transporter permease | |
spr1192 | 1 | 30 | -5.959270 | peptide ABC transporter permease | |
spr1191 | 1 | 29 | -6.545028 | peptide ABC transporter ATP-binding protein | |
spr1190 | 1 | 29 | -6.992449 | hypothetical protein | |
spr1189 | 2 | 27 | -3.519967 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1225 | INTIMIN | 30 | 0.010 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1224 | ANTHRAXTOXNA | 30 | 0.019 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1220 | BACINVASINB | 28 | 0.035 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1214 | UREASE | 37 | 1e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. |
15 | spr1100 | spr1091 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1100 | -2 | 13 | -4.573777 | L-lactate dehydrogenase | |
spr1099 | -2 | 13 | -4.349538 | DNA gyrase subunit A | |
spr1098 | -1 | 17 | -6.501326 | sortase | |
spr1097 | -1 | 16 | -5.443951 | formate/nitrate transporter | |
spr1094 | -1 | 17 | -4.582935 | hypothetical protein | |
spr1093 | 0 | 20 | -5.479936 | hypothetical protein | |
spr1092 | -2 | 23 | 3.107399 | tRNA pseudouridine synthase B | |
spr1091 | -2 | 24 | 3.025635 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1094 | RTXTOXIND | 35 | 5e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
16 | spr0975 | spr0934 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0975 | -1 | 16 | -4.013293 | hypothetical protein | |
spr0974 | 1 | 18 | -5.809853 | phosphoenolpyruvate carboxylase | |
spr0973 | 5 | 29 | -8.238233 | cell division protein FtsW | |
spr0972 | 5 | 36 | -10.897839 | hypothetical protein | |
spr0971 | 5 | 37 | -11.143359 | macolide ABC transporter permease | |
spr0970 | 5 | 38 | -11.267806 | hypothetical protein | |
spr0969 | 4 | 38 | -12.071376 | nikkomycin biosynthesis protein, carboxylase | |
spr0968 | 4 | 37 | -11.999879 | hypothetical protein | |
spr0967 | 5 | 36 | -12.043389 | hypothetical protein | |
spr0966 | 5 | 36 | -11.498025 | hypothetical protein | |
spr0965 | 3 | 34 | -11.437895 | hypothetical protein | |
spr0964 | 3 | 31 | -11.437708 | hypothetical protein | |
spr0963 | 3 | 29 | -10.270177 | hypothetical protein | |
spr0962 | 2 | 27 | -9.425685 | hypothetical protein | |
spr0961 | 2 | 24 | -8.584386 | UDP-N-acetyl-D-mannosaminuronic acid | |
spr0960 | 3 | 22 | -8.020562 | positive transcriptional regulator MutR | |
spr0959 | 2 | 19 | -4.815005 | hypothetical protein | |
spr0956 | 1 | 17 | -4.057437 | Tn5252, ORF 9 protein | |
spr0955 | 1 | 16 | -3.350116 | Tn5252, ORF 10 protein | |
spr0952 | 1 | 18 | -3.863862 | hypothetical protein | |
spr0951 | 2 | 18 | -4.059839 | transcriptional regulator | |
spr0948 | 1 | 20 | -4.425889 | neopullulanase | |
spr0947 | 1 | 23 | -5.484900 | hypothetical protein | |
spr0946 | 1 | 27 | -5.944299 | hydrolase | |
spr0945 | 2 | 32 | -7.762526 | hypothetical protein | |
spr0943 | 4 | 31 | -7.599107 | hypothetical protein | |
spr0942 | 5 | 37 | -8.419465 | hypothetical protein | |
spr0941 | 10 | 42 | -8.725048 | hypothetical protein | |
spr0940 | 10 | 44 | -9.078116 | hypothetical protein | |
spr0939 | 10 | 45 | -9.052262 | hypothetical protein | |
spr0938 | 10 | 44 | -8.881400 | iron-compound ABC transporter ATP-binding | |
spr0936 | 2 | 29 | -6.341524 | iron-compound ABC transporter permease | |
spr0935 | 1 | 20 | -4.399524 | iron-compound ABC transporter permease | |
spr0934 | 0 | 14 | -3.100680 | iron-compound ABC transporter substrate-binding |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0971 | TCRTETA | 38 | 6e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0956 | PF01540 | 26 | 0.026 | Adhesin lipoprotein | |
>PF01540#Adhesin lipoprotein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0942 | FLGHOOKAP1 | 35 | 8e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0934 | FERRIBNDNGPP | 60 | 2e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. |
17 | spr0916 | spr0897 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0916 | -3 | 16 | -3.104913 | GtrA family protein | |
spr0915 | -2 | 13 | -1.626279 | large conductance mechanosensitive channel | |
spr0914 | -1 | 14 | -1.613573 | ferrochelatase | |
spr0913 | -2 | 13 | -1.184530 | peptidase T | |
spr0912 | -1 | 15 | -1.665785 | hypothetical protein | |
spr0908 | -1 | 15 | -1.831401 | pneumococcal histidine triad protein E | |
spr0907 | 0 | 12 | -0.403956 | pneumococcal histidine triad protein D | |
spr0906 | 3 | 15 | -0.821300 | adhesion lipoprotein | |
spr0905 | 4 | 12 | -1.832750 | cationic amino acid transporter | |
spr0904 | 3 | 14 | -2.400625 | hypothetical protein | |
spr0903 | 4 | 15 | -2.397428 | cytochrome c-type biogenesis protein | |
spr0902 | 3 | 15 | -1.185901 | hypothetical protein | |
spr0900 | 2 | 17 | -1.948480 | hypothetical protein | |
spr0897 | 2 | 18 | -2.049917 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0915 | MECHCHANNEL | 93 | 1e-27 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0907 | PERTACTIN | 32 | 0.015 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0906 | ADHESNFAMILY | 228 | 1e-75 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0904 | ADHESNFAMILY | 27 | 0.046 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. |
18 | spr0637 | spr0615 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0637 | 2 | 20 | 1.394483 | thiamine-phosphate pyrophosphorylase | |
spr0636 | 2 | 19 | 1.059208 | hydroxyethylthiazole kinase | |
spr0635 | 1 | 17 | -0.423620 | hypothetical protein | |
spr0634 | 1 | 18 | -1.122398 | extracellular enzyme gene transcriptional | |
spr0633 | 0 | 19 | -0.985346 | hypothetical protein | |
spr0632 | -3 | 14 | 0.263725 | ABC transporter ATP-binding protein | |
spr0631 | -2 | 16 | 0.339490 | hypothetical protein | |
spr0630 | -2 | 15 | 1.047807 | thiamine-phosphate pyrophosphorylase | |
spr0629 | -3 | 15 | 2.036493 | hydroxyethylthiazole kinase | |
spr0628 | -3 | 18 | 3.037629 | hypothetical protein | |
spr0627 | -2 | 16 | 1.984155 | lactate oxidase | |
spr0626 | -1 | 15 | -0.329334 | lysyl-tRNA synthetase | |
spr0624 | 2 | 21 | -3.533008 | amino acid ABC transporter permease | |
spr0623 | 3 | 24 | -5.395434 | amino acid ABC transporter permease | |
spr0622 | 3 | 26 | -6.196686 | amino acid ABC transporter ATP-binding protein | |
spr0619 | 4 | 26 | -6.362886 | ABC transporter ATP-binding protein | |
spr0618 | 2 | 21 | -3.934340 | hypothetical protein | |
spr0617 | 3 | 20 | -3.817635 | hypothetical protein | |
spr0616 | 3 | 22 | -4.692197 | hypothetical protein | |
spr0615 | 1 | 17 | -3.339393 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0622 | PF05272 | 33 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
19 | spr0599 | spr0590 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0599 | 2 | 25 | 0.855152 | hypothetical protein | |
spr0598 | 2 | 23 | 1.663026 | elongation factor Tu family protein | |
spr0597 | 0 | 21 | 0.966447 | ribosomal small subunit pseudouridine synthase | |
spr0596 | -2 | 19 | 1.555240 | hypothetical protein | |
spr0595 | -1 | 19 | 1.759355 | hypothetical protein | |
spr0594 | -1 | 22 | 2.459680 | hypothetical protein | |
spr0593 | -1 | 22 | 3.053513 | transcriptional regulator | |
spr0592 | -1 | 19 | 3.201573 | hypothetical protein | |
spr0591 | -1 | 18 | 3.352624 | ribonuclease Z | |
spr0590 | -2 | 17 | 3.120292 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0598 | TCRTETOQM | 181 | 2e-51 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0597 | AEROLYSIN | 30 | 0.013 | Aerolysin signature. | |
>AEROLYSIN#Aerolysin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0592 | DHBDHDRGNASE | 80 | 3e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
20 | spr0564 | spr0547 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0564 | -1 | 23 | -5.509235 | PTS system transporter subunit IIC | |
spr0563 | 2 | 23 | -6.183984 | hypothetical protein | |
spr0562 | 3 | 21 | -5.702647 | PTS system transporter subunit IIA | |
spr0561 | 3 | 18 | -4.829291 | cell wall-associated serine proteinase PrtA | |
spr0560a | 0 | 17 | 0.464943 | hypothetical protein | |
spr0560 | -1 | 16 | 0.448633 | hypothetical protein | |
spr0559 | -2 | 14 | 0.994084 | hypothetical protein | |
spr0558 | -1 | 15 | 1.458239 | hypothetical protein | |
spr0557 | 0 | 15 | 2.338690 | ABC transporter ATP-binding protein | |
spr0556 | 3 | 19 | 1.965050 | 50S ribosomal protein L1 | |
spr0555 | 0 | 13 | 2.471221 | 50S ribosomal protein L11 | |
spr0554 | -1 | 17 | 2.892572 | hypothetical protein | |
spr0553 | 0 | 18 | 2.880480 | HIT family protein | |
spr0552 | -1 | 18 | 2.762279 | hypothetical protein | |
spr0551 | 0 | 17 | 2.306351 | branched chain amino acid ABC transporter | |
spr0548 | -2 | 14 | 2.955433 | hypothetical protein | |
spr0547 | -3 | 14 | 3.128671 | dipeptidase PepV |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0561 | SUBTILISIN | 93 | 3e-22 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0559 | ACRIFLAVINRP | 28 | 0.044 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
21 | spr0508 | spr0447 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0508 | 0 | 23 | -4.554625 | hypothetical protein | |
spr0507 | 1 | 23 | -4.961371 | phenylalanyl-tRNA synthetase subunit alpha | |
spr0506 | 1 | 28 | -6.232214 | 6-phospho-beta-glucosidase | |
spr0505 | 1 | 26 | -6.106459 | PTS system beta-glucosides-specific transporter | |
spr0504 | 1 | 11 | -1.139812 | BglG family transcriptional antiterminator | |
spr0499 | 0 | 11 | -1.424810 | hypothetical protein | |
spr0499a | 0 | 13 | -0.642522 | hypothetical protein | |
spr0494 | 0 | 14 | 0.018596 | cell filamentation protein Fic-related protein | |
spr0493 | 0 | 17 | 0.328641 | hypothetical protein | |
spr0492 | 0 | 20 | 1.399551 | valyl-tRNA synthetase | |
spr0491 | 1 | 19 | -0.145327 | hypothetical protein | |
spr0490 | 0 | 23 | 3.665173 | hypothetical protein | |
spr0489 | -1 | 22 | 2.869490 | hypothetical protein | |
spr0488 | -3 | 16 | 1.807819 | hypothetical protein | |
spr0487 | -1 | 18 | 1.921216 | hypothetical protein | |
spr0486 | 0 | 14 | 3.075710 | hypothetical protein | |
spr0485 | 2 | 17 | 2.325525 | hypothetical protein | |
spr0484 | 3 | 17 | 2.270298 | hypothetical protein | |
spr0483 | 4 | 21 | 2.471152 | hypothetical protein | |
spr0482 | 4 | 23 | 3.138314 | ribosome-binding factor A | |
spr0481 | 4 | 22 | 3.138511 | translation initiation factor IF-2 | |
spr0480 | 0 | 23 | 1.820846 | hypothetical protein | |
spr0479 | -2 | 20 | 1.200533 | hypothetical protein | |
spr0478 | -2 | 18 | 0.741206 | transcription elongation factor NusA | |
spr0477 | -1 | 19 | -0.388916 | hypothetical protein | |
spr0476 | 0 | 20 | -1.189657 | tRNA (guanine-N(7)-)-methyltransferase | |
spr0475 | 1 | 23 | -2.040150 | hypothetical protein | |
spr0474 | 2 | 22 | -3.523811 | ABC transporter ATP-binding protein | |
spr0473 | 4 | 20 | -3.512958 | hypothetical protein | |
spr0472 | 5 | 19 | -2.201188 | immunity protein BlpY | |
spr0471 | 6 | 19 | -2.837877 | hypothetical protein | |
spr0470 | 5 | 20 | -1.936886 | hypothetical protein | |
spr0465 | 5 | 21 | -0.746862 | peptide pheromone BlpC | |
spr0464 | 3 | 22 | 0.337562 | histidine kinase | |
spr0463 | 2 | 23 | 1.871963 | response regulator BlpR | |
spr0462 | 1 | 22 | 1.566407 | regulatory protein BlpS | |
spr0461 | 0 | 21 | 3.517213 | hypothetical protein | |
spr0460 | 2 | 22 | 3.315424 | ABC transporter permease | |
spr0459 | 3 | 27 | 3.483937 | ABC transporter ATP-binding protein | |
spr0458 | 3 | 25 | 3.287901 | hypothetical protein | |
spr0457 | 2 | 23 | 2.513278 | hypothetical protein | |
spr0456 | 3 | 23 | 2.277215 | molecular chaperone DnaJ | |
spr0455 | 2 | 17 | -0.507804 | molecular chaperone DnaK | |
spr0454 | 1 | 13 | -2.833419 | heat shock protein GrpE | |
spr0453 | 0 | 17 | -4.201855 | heat-inducible transcription repressor | |
spr0452 | 1 | 24 | -6.086298 | hypothetical protein | |
spr0451 | 1 | 24 | -6.461155 | hypothetical protein | |
spr0450 | 1 | 26 | -7.073911 | type I restriction-modification system R | |
spr0449 | 0 | 23 | -6.472503 | type I restriction-modification system M | |
spr0448 | 0 | 24 | -6.096003 | type I restriction-modification system S | |
spr0447 | 0 | 19 | -5.591673 | integrase/recombinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0508 | SACTRNSFRASE | 39 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0481 | TCRTETOQM | 86 | 3e-19 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0472 | PF06580 | 30 | 0.007 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0455 | SHAPEPROTEIN | 148 | 7e-42 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0451 | BCTERIALGSPC | 27 | 0.004 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C |
22 | spr0427 | spr0421 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0427 | 2 | 18 | -2.866612 | potassium transporter peripheral membrane | |
spr0426 | 2 | 21 | -3.430523 | Trk transporter membrane-spanning protein | |
spr0425 | 3 | 26 | -5.128006 | PTS system sugar-specific transporter subunit | |
spr0424 | 3 | 24 | -5.286975 | 6-phospho-beta-galactosidase | |
spr0423 | 2 | 18 | -3.253183 | PTS system lactose-specific transporter subunit | |
spr0422 | 1 | 16 | -2.745879 | hypothetical protein | |
spr0421 | 2 | 20 | -1.444285 | PTS system cellobiose-specific transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0424 | HTHFIS | 31 | 0.008 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0421 | RTXTOXINA | 29 | 0.043 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family |
23 | spr0398 | spr0393 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0398 | 0 | 24 | 3.776359 | 50S ribosomal protein L28 | |
spr0397 | 0 | 23 | 3.616364 | hypothetical protein | |
spr0396 | 0 | 27 | 4.273244 | peptide chain release factor 3 | |
spr0395 | 2 | 30 | 3.861015 | aspartyl/glutamyl-tRNA amidotransferase subunit | |
spr0394 | 1 | 29 | 3.573240 | aspartyl/glutamyl-tRNA amidotransferase subunit | |
spr0393 | 1 | 25 | 3.366354 | aspartyl/glutamyl-tRNA amidotransferase subunit |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0396 | TCRTETOQM | 230 | 4e-70 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
24 | spr0381 | spr0359 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0381 | 2 | 14 | 2.271701 | 3-ketoacyl-ACP reductase | |
spr0380 | 1 | 12 | 2.499154 | ACP S-malonyltransferase | |
spr0379 | -1 | 10 | 1.856262 | enoyl-acyl carrier protein(ACP) reductase | |
spr0378 | -1 | 12 | 1.431727 | acyl carrier protein | |
spr0377 | -1 | 15 | 2.220529 | 3-oxoacyl-ACP synthase | |
spr0376 | -2 | 15 | 2.026401 | hypothetical protein | |
spr0375 | -3 | 17 | 2.375179 | enoyl-CoA hydratase | |
spr0374 | -2 | 18 | 2.908712 | aspartate kinase | |
spr0373 | -2 | 16 | 3.670426 | hypothetical protein | |
spr0372 | -2 | 16 | 3.649441 | seryl-tRNA synthetase | |
spr0371 | 0 | 19 | 3.392998 | exfoliative toxin | |
spr0370 | 0 | 20 | 3.833500 | hypothetical protein | |
spr0369 | -1 | 22 | 3.810818 | sodium:alanine symporter family protein | |
spr0368 | -1 | 24 | 3.694107 | MutS2 family protein | |
spr0367 | -1 | 22 | 2.644185 | hypothetical protein | |
spr0366 | -1 | 19 | 1.602837 | hypothetical protein | |
spr0365 | -2 | 18 | 1.360867 | ribonuclease HIII | |
spr0364 | -2 | 11 | -0.653250 | signal peptidase I | |
spr0363 | -2 | 12 | -0.731776 | exonuclease V | |
spr0362 | -2 | 17 | -2.829411 | trigger factor | |
spr0359 | 0 | 19 | -3.093857 | mannitol-1-phosphate 5-dehydrogenase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0381 | DHBDHDRGNASE | 127 | 8e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
25 | spr0322 | spr0316 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0322 | 2 | 18 | -4.011683 | dTDP-glucose-4,6-dehydratase | |
spr0321 | 3 | 21 | -6.420661 | hypothetical protein | |
spr0320 | 4 | 24 | -7.987249 | hypothetical protein | |
spr0319 | 3 | 26 | -8.741917 | hypothetical protein | |
spr0318 | 3 | 27 | -9.061471 | hypothetical protein | |
spr0317 | 4 | 31 | -10.074054 | hypothetical protein | |
spr0316 | 1 | 19 | -5.336103 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0322 | NUCEPIMERASE | 132 | 5e-38 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
26 | spr0176 | spr0171 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0176 | -1 | 18 | 3.506347 | Holliday junction resolvase-like protein | |
spr0175 | 1 | 21 | 3.393568 | hypothetical protein | |
spr0174 | -1 | 21 | 3.532731 | hypothetical protein | |
spr0173 | 0 | 22 | 3.659597 | transcriptional regulator Spx | |
spr0172 | -1 | 21 | 3.237210 | peptidase M24 family protein | |
spr0171 | -1 | 22 | 3.527133 | excinuclease ABC subunit A |
27 | spr0144 | spr0107 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0144 | 1 | 19 | -4.763142 | hypothetical protein | |
spr0143 | 1 | 23 | -6.064188 | hypothetical protein | |
spr0142 | 1 | 26 | -7.717070 | hypothetical protein | |
spr0141 | 2 | 29 | -9.037380 | hypothetical protein | |
spr0140 | 1 | 31 | -9.860861 | transcriptional regulator | |
spr0139 | 2 | 29 | -8.333484 | UDP-glucose dehydrogenase | |
spr0138 | 1 | 26 | -6.721580 | hypothetical protein | |
spr0137 | 1 | 23 | -5.007902 | ABC transporter ATP-binding protein | |
spr0136 | 2 | 23 | -2.977562 | glycosyl transferase | |
spr0135 | 1 | 19 | -0.406290 | exopolysaccharide (EPS) synthesis | |
spr0131 | 0 | 23 | 4.650911 | DNA-binding/iron metalloprotein/AP endonuclease | |
spr0130 | 0 | 22 | 4.327178 | ribosomal protein alanine acetyltransferase | |
spr0129 | 0 | 22 | 4.767846 | hypothetical protein | |
spr0128 | 1 | 22 | 4.628382 | hypothetical protein | |
spr0127 | 2 | 25 | 5.399769 | hypothetical protein | |
spr0126 | -1 | 20 | 4.757518 | hypothetical protein | |
spr0125 | -1 | 18 | 4.229197 | hypothetical protein | |
spr0124 | -1 | 16 | 3.316534 | tRNA uridine 5-carboxymethylaminomethyl | |
spr0123 | 2 | 19 | -0.329182 | MutT/nudix family protein | |
spr0122 | 2 | 20 | -0.869490 | tRNA-specific 2-thiouridylase MnmA | |
spr0121 | 3 | 27 | -5.076056 | surface protein pspA | |
spr0120 | 0 | 33 | -10.802335 | hypothetical protein | |
spr0119a | 2 | 32 | -9.461519 | hypothetical protein | |
spr0119 | 2 | 30 | -10.155815 | hypothetical protein | |
spr0118 | 3 | 30 | -9.630174 | hypothetical protein | |
spr0117 | 2 | 30 | -10.838316 | hypothetical protein | |
spr0116 | 7 | 34 | -9.576003 | hypothetical protein | |
spr0115 | 6 | 32 | -8.402590 | hypothetical protein | |
spr0114 | 5 | 30 | -8.460547 | hypothetical protein | |
spr0113 | 4 | 27 | -6.700692 | hypothetical protein | |
spr0112 | 3 | 29 | -5.938955 | hypothetical protein | |
spr0111 | 1 | 26 | -5.748983 | hypothetical protein | |
spr0110 | 0 | 21 | -5.754733 | hypothetical protein | |
spr0109 | -1 | 19 | -4.584886 | hypothetical protein | |
spr0108 | -1 | 16 | -3.841122 | hypothetical protein | |
spr0107 | -1 | 16 | -3.005615 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0130 | SACTRNSFRASE | 29 | 0.006 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0126 | BACINVASINB | 25 | 0.042 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0121 | GPOSANCHOR | 65 | 6e-13 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0111 | PRTACTNFAMLY | 27 | 0.023 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0108 | RTXTOXIND | 105 | 1e-26 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0107 | PHPHTRNFRASE | 30 | 0.004 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase |
28 | spr2045 | spr2035 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr2045 | 0 | 23 | -7.412938 | serine protease | |
spr2044 | 2 | 22 | -8.291172 | rRNA large subunit methyltransferase | |
spr2043 | 1 | 17 | -6.874764 | *competence stimulating peptide | |
spr2042 | 1 | 17 | -6.159394 | sensor histidine kinase ComD | |
spr2041 | -1 | 18 | -4.526944 | response regulator | |
spr2040 | -1 | 19 | -4.270331 | **hypothetical protein | |
spr2036 | -1 | 18 | -4.033331 | ABC transporter permease | |
spr2035 | -1 | 19 | -3.028003 | ABC transporter ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2045 | V8PROTEASE | 61 | 1e-12 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2044 | 56KDTSANTIGN | 28 | 0.023 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2040 | HTHTETR | 48 | 3e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr2035 | PF05272 | 32 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
29 | spr1863 | spr1852 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1863 | 5 | 23 | 0.329094 | competence protein CglB | |
spr1862 | 0 | 13 | 0.030460 | competence protein CglC | |
spr1861 | 0 | 13 | 0.022583 | competence protein CglD | |
spr1859 | 0 | 11 | 0.079720 | hypothetical protein | |
spr1858 | -1 | 11 | -0.394707 | hypothetical protein | |
spr1855 | -1 | 11 | 0.017708 | hypothetical protein | |
spr1854 | -1 | 13 | -0.329987 | acetate kinase | |
spr1853 | -1 | 13 | -0.493320 | ribonuclease P | |
spr1852 | -1 | 12 | -0.338763 | SpoIIIJ family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1863 | BCTERIALGSPF | 75 | 4e-17 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1862 | BCTERIALGSPG | 43 | 1e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1861 | BCTERIALGSPH | 26 | 0.040 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1854 | ACETATEKNASE | 495 | e-178 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1852 | 60KDINNERMP | 139 | 5e-40 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. |
30 | spr1817 | spr1813 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1817 | -2 | 15 | -0.254419 | ABC transporter ATP-binding protein | |
spr1816 | -2 | 13 | 1.107377 | hypothetical protein | |
spr1815 | -3 | 14 | 1.937823 | sensor histidine kinase | |
spr1814 | -2 | 14 | 3.013600 | DNA-binding response regulator | |
spr1813 | -3 | 13 | 2.204545 | catabolite control protein A |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1817 | PF05272 | 31 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1815 | PF06580 | 38 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1814 | HTHFIS | 73 | 3e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1813 | MALTOSEBP | 29 | 0.025 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
31 | spr1541 | spr1534 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1541 | -1 | 16 | 3.622410 | 4'-phosphopantetheinyl transferase | |
spr1540 | -1 | 14 | 2.979629 | alanine racemase | |
spr1539 | -1 | 11 | 1.417056 | ATP-dependent DNA helicase RecG | |
spr1538 | -1 | 12 | -0.572875 | acetyl xylan esterase | |
spr1537 | -2 | 17 | -1.757188 | hypothetical protein | |
spr1536 | -1 | 20 | -2.857376 | neuraminidase A | |
spr1535 | 0 | 26 | -4.832917 | hypothetical protein | |
spr1534 | -1 | 24 | -4.029413 | ABC transporter substrate-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1541 | ENTSNTHTASED | 27 | 0.017 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1540 | ALARACEMASE | 349 | e-121 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1536 | GPOSANCHOR | 38 | 2e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1534 | MALTOSEBP | 33 | 0.003 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
32 | spr1406 | spr1399 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1406 | 2 | 25 | 0.334089 | hypothetical protein | |
spr1405 | 1 | 22 | 0.914548 | hypothetical protein | |
spr1404 | 1 | 22 | 0.825104 | hypothetical protein | |
spr1403 | 2 | 23 | 2.079008 | hypothetical protein | |
spr1402 | 0 | 16 | 2.529164 | hypothetical protein | |
spr1400 | 0 | 17 | 2.593282 | hypothetical protein | |
spr1399 | 1 | 21 | 3.046182 | aspartate aminotransferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1406 | FLGMRINGFLIF | 29 | 6e-04 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1404 | PF05043 | 300 | 1e-98 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1403 | TONBPROTEIN | 52 | 1e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1399 | FLGPRINGFLGI | 29 | 0.028 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. |
33 | spr1373 | spr1368 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr1373 | -1 | 13 | 0.168383 | UDP-N-acetylmuramate--L-alanine ligase | |
spr1372 | 2 | 13 | -0.212240 | hypothetical protein | |
spr1371 | 1 | 13 | -0.609679 | hypothetical protein | |
spr1370 | 0 | 11 | -1.441420 | hypothetical protein | |
spr1369 | 1 | 14 | -2.728842 | transcription elongation factor GreA | |
spr1368 | 1 | 15 | -3.747939 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1373 | ACETATEKNASE | 32 | 0.006 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1372 | SACTRNSFRASE | 37 | 9e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1370 | PF03544 | 31 | 0.008 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr1368 | SACTRNSFRASE | 37 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
34 | spr0875 | spr0867 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0875 | 0 | 18 | 2.695488 | major facilitator superfamily multi-drug | |
spr0873 | 0 | 19 | 2.505279 | dephospho-CoA kinase | |
spr0872 | 0 | 13 | 0.856244 | formamidopyrimidine-DNA glycosylase | |
spr0871 | 0 | 13 | 0.851326 | GTP-binding protein Era | |
spr0870 | 1 | 13 | 0.960721 | diacylglycerol kinase | |
spr0869 | 0 | 11 | 0.884299 | metalloprotease | |
spr0868 | -1 | 11 | 0.873726 | adherence and virulence protein A | |
spr0867 | 1 | 11 | 0.475028 | endo-beta-N-acetylglucosaminidase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0875 | TCRTETA | 106 | 2e-27 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0871 | TCRTETOQM | 36 | 1e-04 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0868 | FbpA_PF05833 | 682 | 0.0 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0867 | FLGFLGJ | 30 | 0.026 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. |
35 | spr0781 | spr0776 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0781 | -2 | 10 | 0.871660 | SpoE family protein | |
spr0780 | -2 | 13 | 0.247726 | PTS system fructose specific transporter subunit | |
spr0779 | -3 | 11 | -0.973275 | 1-phosphofructokinase | |
spr0778 | -3 | 11 | -0.163428 | lactose PTS system repressor | |
spr0777 | -2 | 12 | -0.049483 | *hypothetical protein | |
spr0776 | -1 | 15 | 1.347948 | D-alanyl-D-alanine carboxypeptidase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0781 | TYPE3IMSPROT | 34 | 0.002 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0779 | LCRVANTIGEN | 28 | 0.031 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0778 | ARGREPRESSOR | 36 | 6e-05 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0776 | BLACTAMASEA | 30 | 0.018 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. |
36 | spr0708 | spr0701 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0708 | -2 | 11 | -0.814759 | sensor histidine kinase CiaH | |
spr0707 | -1 | 12 | -0.545736 | DNA-binding response regulator CiaR | |
spr0706 | -1 | 12 | 0.387151 | aminopeptidase | |
spr0705 | 0 | 20 | -1.953547 | hypothetical protein | |
spr0704 | -1 | 20 | -2.916641 | hypothetical protein | |
spr0703 | 1 | 20 | -2.513821 | hypothetical protein | |
spr0702 | 0 | 17 | -1.238938 | MutT/nudix family protein | |
spr0701 | 0 | 15 | -1.131570 | 3-ketoacyl-ACP reductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0708 | PF06580 | 35 | 6e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0707 | HTHFIS | 86 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0704 | PHPHTRNFRASE | 73 | 2e-16 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0701 | DHBDHDRGNASE | 97 | 2e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
37 | spr0584 | spr0576 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0584 | 0 | 11 | -0.381630 | glucokinase | |
spr0583 | 0 | 12 | -0.659331 | pneumococcal surface protein | |
spr0582 | 0 | 10 | -0.321873 | Para-aminobenzoate synthetase | |
spr0581 | 1 | 10 | -0.688599 | zinc metalloprotease | |
spr0580 | 1 | 18 | 1.996909 | hypothetical protein | |
spr0579 | 1 | 18 | 1.158884 | sensor histidine kinase | |
spr0578 | 3 | 19 | 0.670966 | DNA-binding response regulator | |
spr0577 | 3 | 18 | 0.600431 | bifunctional methionine sulfoxide reductase A/B | |
spr0576 | 3 | 21 | 0.669605 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0584 | PF03309 | 35 | 2e-04 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0581 | IGASERPTASE | 55 | 3e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0579 | PF06580 | 199 | 3e-61 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0578 | HTHFIS | 95 | 1e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0576 | adhesinb | 27 | 0.049 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. |
38 | spr0531 | spr0518 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0531 | 1 | 19 | 1.892144 | oxidoreductase | |
spr0530 | 1 | 17 | 2.006964 | fructose-bisphosphate aldolase | |
spr0529 | 3 | 19 | 1.986244 | histidine kinase VncS | |
spr0528 | 1 | 18 | 2.056697 | response regulator VncR | |
spr0526 | 0 | 17 | 2.235100 | peptide ABC transporter permease | |
spr0525 | -1 | 14 | 1.374773 | ABC transporter ATP-binding protein | |
spr0524 | -1 | 16 | 2.479260 | peptide ABC transporter permease | |
spr0521 | -1 | 15 | 3.364660 | hypothetical protein | |
spr0520 | -1 | 15 | 3.379027 | hypothetical protein | |
spr0519 | 0 | 19 | 2.883777 | cysteinyl-tRNA synthetase | |
spr0518 | 1 | 19 | 2.773999 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0531 | ACRIFLAVINRP | 31 | 0.008 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0529 | PF06580 | 31 | 0.011 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0528 | HTHFIS | 85 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0525 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0521 | HTHFIS | 35 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0518 | SACTRNSFRASE | 32 | 0.001 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
39 | spr0329 | spr0322 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0329 | 1 | 11 | 1.450896 | penicillin-binding protein 1A | |
spr0328 | 0 | 12 | 1.209872 | cell wall surface anchor family protein | |
spr0327 | -2 | 11 | 0.283650 | oligopeptide ABC transporter substrate-binding | |
spr0326 | -3 | 12 | 1.281292 | hypothetical protein | |
spr0325 | -3 | 12 | 0.886474 | hypothetical protein | |
spr0323 | -1 | 13 | -0.471589 | dTDP-L-rhamnose synthase | |
spr0322 | 2 | 18 | -4.011683 | dTDP-glucose-4,6-dehydratase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0329 | VACCYTOTOXIN | 33 | 0.004 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0328 | GPOSANCHOR | 32 | 0.021 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0323 | NUCEPIMERASE | 63 | 2e-13 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0322 | NUCEPIMERASE | 132 | 5e-38 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
40 | spr0092 | spr0086 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0092 | -1 | 19 | 0.268277 | capsule polysaccharide biosynthesis protein | |
spr0091 | 2 | 20 | -0.363817 | hypothetical protein | |
spr0090 | 2 | 21 | 1.215530 | transporter | |
spr0089 | 1 | 19 | 1.041155 | hypothetical protein | |
spr0088 | 1 | 22 | -0.010549 | hypothetical protein | |
spr0087 | 0 | 22 | -0.089487 | hypothetical protein | |
spr0086 | 0 | 23 | -0.055353 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0092 | NUCEPIMERASE | 82 | 4e-19 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0090 | TCRTETA | 43 | 2e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0088 | TCRTETB | 28 | 0.041 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0086 | IGASERPTASE | 43 | 2e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
41 | spr0052 | spr0038 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
spr0052 | 0 | 20 | 5.126369 | phosphoribosylamine--glycine ligase | |
spr0051 | 1 | 20 | 4.752348 | bifunctional | |
spr0050 | 1 | 18 | 3.813626 | VanZ protein | |
spr0049 | 0 | 20 | 4.689734 | phosphoribosylglycinamide formyltransferase | |
spr0048 | -2 | 21 | 4.458550 | phosphoribosylaminoimidazole synthetase | |
spr0047 | -2 | 20 | 3.889182 | amidophosphoribosyltransferase | |
spr0046 | -2 | 20 | 3.011930 | phosphoribosylformylglycinamidine synthase | |
spr0045 | -2 | 24 | 1.963728 | phosphoribosylaminoimidazole-succinocarboxamide | |
spr0044 | -1 | 24 | 2.171430 | competence factor transport protein ComB | |
spr0043 | 0 | 23 | 2.720384 | competence factor transporting ATP-binding | |
spr0042 | 3 | 21 | 1.551238 | transposase | |
spr0041 | 1 | 22 | 3.140681 | transposase | |
spr0040 | -1 | 23 | 4.708274 | amphipathic pore-forming protein | |
spr0038 | -1 | 24 | 4.537531 | acyl carrier protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0052 | ARGDEIMINASE | 31 | 0.010 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0049 | SUBTILISIN | 30 | 0.005 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0048 | BINARYTOXINA | 30 | 0.015 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0045 | RTXTOXINA | 28 | 0.035 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0044 | RTXTOXIND | 64 | 3e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0043 | ANTHRAXTOXNA | 31 | 0.024 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
spr0038 | NUCEPIMERASE | 27 | 0.005 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |