| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | CGSHiGG_00085 | CGSHiGG_00120 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_00085 | 3 | 20 | -2.083436 | hypothetical protein | |
| CGSHiGG_00090 | 3 | 21 | -3.200187 | hypothetical protein | |
| CGSHiGG_00095 | 2 | 20 | -3.993186 | hypothetical protein | |
| CGSHiGG_00100 | 1 | 19 | -3.982427 | lic-1 operon protein | |
| CGSHiGG_00105 | 1 | 23 | -1.479661 | lic-1 operon protein | |
| CGSHiGG_00110 | 3 | 23 | -2.962724 | lic-1 operon protein | |
| CGSHiGG_00115 | 2 | 23 | -2.637526 | hypothetical protein | |
| CGSHiGG_00120 | 3 | 22 | -2.442355 | hypothetical protein |
| 2 | CGSHiGG_00500 | CGSHiGG_00670 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_00500 | -1 | 13 | -4.203076 | putative zinc protease | |
| CGSHiGG_00505 | 1 | 10 | -0.503179 | zinc protease | |
| CGSHiGG_00520 | 0 | 10 | -1.491763 | putative molybdenum-pterin binding protein | |
| CGSHiGG_00525 | 0 | 10 | -1.595166 | putative dissimilatory sulfite reductase, | |
| CGSHiGG_00540 | 0 | 10 | -1.936924 | condesin subunit F | |
| CGSHiGG_00545 | 0 | 11 | -2.392359 | modification methylase HaeII | |
| CGSHiGG_00570 | 1 | 11 | -1.838922 | cell division protein MukB | |
| CGSHiGG_00575 | 4 | 18 | -6.041317 | hypothetical protein | |
| CGSHiGG_00580 | 2 | 19 | -4.890450 | cell division protein MukB | |
| CGSHiGG_00585 | 5 | 22 | -5.001733 | exonuclease I | |
| CGSHiGG_00590 | 10 | 27 | -5.874244 | hypothetical protein | |
| CGSHiGG_00595 | 10 | 25 | -5.838513 | hypothetical protein | |
| CGSHiGG_00600 | 9 | 25 | -5.620542 | hypothetical protein | |
| CGSHiGG_00605 | 4 | 25 | -4.368019 | RstR-like phage repressor protein | |
| CGSHiGG_00610 | 3 | 26 | -4.434565 | hypothetical protein | |
| CGSHiGG_00615 | 1 | 26 | -4.764314 | hypothetical protein | |
| CGSHiGG_00620 | 0 | 25 | -4.008741 | hypothetical protein | |
| CGSHiGG_00625 | 1 | 24 | -3.768141 | hypothetical protein | |
| CGSHiGG_00630 | 1 | 23 | -5.447513 | hypothetical protein | |
| CGSHiGG_00635 | 1 | 23 | -5.640925 | hypothetical protein | |
| CGSHiGG_00640 | 2 | 21 | -5.471482 | putative phage-like membrane protein | |
| CGSHiGG_00645 | 1 | 19 | -4.847950 | putative phage-like membrane protein | |
| CGSHiGG_00650 | 2 | 20 | -4.981577 | putative phage-like secreted protein | |
| CGSHiGG_00655 | 2 | 20 | -4.561327 | phosphate regulon sensor protein PhoR | |
| CGSHiGG_00660 | 3 | 18 | -3.139541 | phosphate regulon transcriptional regulatory | |
| CGSHiGG_00665 | 3 | 18 | -3.461599 | phosphate transporter ATP-binding protein | |
| CGSHiGG_00670 | 2 | 14 | -2.463578 | phosphate transport system permease protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_00570 | GPOSANCHOR | 39 | 1e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_00590 | ALARACEMASE | 27 | 0.015 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_00610 | PF05043 | 30 | 0.018 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_00635 | PF05616 | 33 | 0.003 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_00650 | BCTERIALGSPD | 95 | 2e-23 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_00660 | HTHFIS | 88 | 2e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 3 | CGSHiGG_00840 | CGSHiGG_00950 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_00840 | 2 | 23 | -2.642323 | hypothetical protein | |
| CGSHiGG_00845 | 4 | 25 | -2.570519 | putative antirepressor protein | |
| CGSHiGG_00850 | 4 | 28 | -2.808448 | hypothetical protein | |
| CGSHiGG_00855 | 2 | 30 | -1.171886 | hypothetical protein | |
| CGSHiGG_00860 | 2 | 33 | 0.279362 | hypothetical protein | |
| CGSHiGG_00865 | 2 | 32 | 0.169566 | hypothetical protein | |
| CGSHiGG_00870 | 2 | 28 | 0.772020 | hypothetical protein | |
| CGSHiGG_00875 | 1 | 25 | 1.527565 | hypothetical protein | |
| CGSHiGG_00880 | 1 | 26 | 1.946062 | putative recombination protein NinB | |
| CGSHiGG_00885 | 2 | 25 | 1.441462 | hypothetical protein | |
| CGSHiGG_00890 | 2 | 25 | 1.606692 | hypothetical protein | |
| CGSHiGG_00895 | 0 | 25 | 1.854688 | hypothetical protein | |
| CGSHiGG_00900 | 2 | 22 | -0.408650 | hypothetical protein | |
| CGSHiGG_00905 | 4 | 24 | -1.892056 | hypothetical protein | |
| CGSHiGG_00910 | 6 | 27 | -2.529967 | hypothetical protein | |
| CGSHiGG_00915 | 5 | 27 | -2.296171 | hypothetical protein | |
| CGSHiGG_00920 | 4 | 28 | -2.682591 | transcriptional regulator | |
| CGSHiGG_00925 | 6 | 29 | -4.395935 | hypothetical protein | |
| CGSHiGG_00930 | 4 | 32 | -4.475146 | hypothetical protein | |
| CGSHiGG_00935 | 4 | 27 | -4.409357 | hypothetical protein | |
| CGSHiGG_00940 | 4 | 28 | -3.675054 | hypothetical protein | |
| CGSHiGG_00945 | 4 | 29 | -3.974993 | hypothetical protein | |
| CGSHiGG_00950 | 1 | 30 | -3.425671 | hypothetical protein |
| 4 | CGSHiGG_01475 | CGSHiGG_01560 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_01475 | 2 | 16 | -0.509036 | hypothetical protein | |
| CGSHiGG_01480 | 2 | 14 | 0.291452 | nuclease | |
| CGSHiGG_01485 | 2 | 12 | 1.116512 | putative selenocysteine lyase | |
| CGSHiGG_01490 | 0 | 20 | 3.078094 | hypothetical protein | |
| CGSHiGG_01495 | -1 | 17 | 2.309988 | hypothetical protein | |
| CGSHiGG_01500 | -2 | 17 | 1.488391 | 7-cyano-7-deazaguanine reductase | |
| CGSHiGG_01505 | -2 | 17 | 1.289486 | bifunctional chorismate mutase/prephenate | |
| CGSHiGG_01510 | -1 | 22 | 0.926505 | tRNA pseudouridine synthase B | |
| CGSHiGG_01525 | 0 | 16 | 0.949262 | putative type I restriction enzyme HindVIIP M | |
| CGSHiGG_01530 | 2 | 12 | -1.253338 | putative type I restriction enzyme HindVIIP | |
| CGSHiGG_01535 | 3 | 14 | -0.852034 | hypothetical protein | |
| CGSHiGG_01540 | 3 | 15 | 0.195423 | hypothetical protein | |
| CGSHiGG_01545 | 2 | 11 | 0.667547 | hypothetical protein | |
| CGSHiGG_01560 | 2 | 10 | 1.475923 | translation initiation factor IF-2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_01560 | TCRTETOQM | 70 | 2e-14 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 5 | CGSHiGG_01880 | CGSHiGG_01905 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_01880 | 4 | 20 | -1.902131 | translation initiation factor Sui1 | |
| CGSHiGG_01885 | 2 | 18 | -1.506705 | orotidine 5'-phosphate decarboxylase | |
| CGSHiGG_01890 | 3 | 18 | -0.895975 | tetratricopeptide repeat protein | |
| CGSHiGG_01895 | 5 | 20 | -0.301162 | hypothetical protein | |
| CGSHiGG_01900 | 4 | 17 | 0.305850 | integration host factor subunit beta | |
| CGSHiGG_01905 | 4 | 18 | 0.462447 | 30S ribosomal protein S1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_01880 | SECA | 33 | 1e-04 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_01900 | DNABINDINGHU | 107 | 3e-34 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_01905 | ACRIFLAVINRP | 30 | 0.029 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 6 | CGSHiGG_02000 | CGSHiGG_02025 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_02000 | 2 | 18 | -1.532801 | 2-oxoglutarate dehydrogenase E1 component | |
| CGSHiGG_02005 | 8 | 32 | -5.370631 | hypothetical protein | |
| CGSHiGG_02010 | 6 | 30 | -5.887105 | hypothetical protein | |
| CGSHiGG_02015 | 4 | 25 | -4.767172 | hypothetical protein | |
| CGSHiGG_02020 | 2 | 21 | -3.375793 | hypothetical protein | |
| CGSHiGG_02025 | 3 | 19 | -2.859101 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_02000 | SALSPVBPROT | 32 | 0.011 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_02020 | RTXTOXIND | 37 | 9e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 7 | CGSHiGG_02205 | CGSHiGG_02245 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_02205 | 0 | 13 | -3.338085 | molybdate-binding periplasmic protein | |
| CGSHiGG_02210 | 1 | 14 | -5.298870 | molybdenum transport protein | |
| CGSHiGG_02215 | 4 | 18 | -7.467069 | putative UDP-galactose--lipooligosaccharide | |
| CGSHiGG_02230 | 7 | 18 | -7.584711 | putative UDP-GlcNAc--lipooligosaccharide | |
| CGSHiGG_02235 | 2 | 15 | -4.428042 | lipopolysaccharide biosynthesis protein | |
| CGSHiGG_02240 | 0 | 14 | -3.357426 | hypothetical protein | |
| CGSHiGG_02245 | 0 | 12 | -3.153182 | lipopolysaccharide biosynthesis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_02245 | 56KDTSANTIGN | 31 | 0.004 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| 8 | CGSHiGG_02690 | CGSHiGG_02745 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_02690 | -3 | 11 | -3.376223 | rod shape-determining protein MreD | |
| CGSHiGG_02695 | -3 | 14 | -3.183866 | hypothetical protein | |
| CGSHiGG_02700 | -2 | 12 | -2.682093 | exonuclease III | |
| CGSHiGG_02705 | -1 | 12 | -2.995607 | exonuclease III | |
| CGSHiGG_02710 | 0 | 14 | -3.582369 | hypothetical protein | |
| CGSHiGG_02715 | 1 | 15 | -3.041755 | FtsH-interacting integral membrane protein | |
| CGSHiGG_02720 | 2 | 16 | -3.151388 | *hypothetical protein | |
| CGSHiGG_02725 | 2 | 15 | -3.245730 | hypothetical protein | |
| CGSHiGG_02740 | 2 | 15 | -3.304958 | glucuronate isomerase | |
| CGSHiGG_02745 | 2 | 15 | -3.525820 | glucuronide permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_02745 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 9 | CGSHiGG_03470 | CGSHiGG_03590 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_03470 | 3 | 18 | 0.268176 | hypothetical protein | |
| CGSHiGG_03475 | 3 | 21 | 0.127936 | 23S rRNA pseudouridine synthase D | |
| CGSHiGG_03480 | 4 | 23 | -0.435287 | hypothetical protein | |
| CGSHiGG_03485 | 5 | 20 | 0.140945 | hypothetical protein | |
| CGSHiGG_03490 | 4 | 17 | 0.753049 | pyruvate formate lyase-activating enzyme 1 | |
| CGSHiGG_03495 | 3 | 16 | 1.644266 | formate acetyltransferase | |
| CGSHiGG_03500 | 2 | 13 | 3.233102 | formate acetyltransferase | |
| CGSHiGG_03505 | 1 | 13 | 3.012074 | putative formate transporter | |
| CGSHiGG_03510 | 0 | 16 | 3.223047 | N-acetyl-D-glucosamine kinase | |
| CGSHiGG_03515 | -2 | 16 | 3.028970 | amino acid carrier protein | |
| CGSHiGG_03520 | -1 | 16 | 2.411231 | esterase | |
| CGSHiGG_03525 | -1 | 16 | 0.494509 | alcohol dehydrogenase class III | |
| CGSHiGG_03530 | 1 | 13 | -2.498040 | putative HTH-type transcriptional regulator | |
| CGSHiGG_03535 | -1 | 14 | -3.370495 | Sec-independent protein translocase protein | |
| CGSHiGG_03540 | -2 | 13 | -3.371617 | sec-independent translocase | |
| CGSHiGG_03545 | -2 | 15 | -3.179280 | Sec-independent protein translocase protein | |
| CGSHiGG_03560 | -2 | 12 | -3.789543 | ferric uptake regulation protein | |
| CGSHiGG_03565 | -3 | 12 | -2.425306 | flavodoxin FldA | |
| CGSHiGG_03570 | -2 | 12 | -1.795366 | esterase/lipase | |
| CGSHiGG_03575 | -3 | 13 | -1.172002 | replication initiation regulator SeqA | |
| CGSHiGG_03580 | -1 | 12 | -0.628926 | O-succinylbenzoic acid--CoA ligase | |
| CGSHiGG_03585 | -1 | 11 | -0.256407 | potassium efflux protein KefA | |
| CGSHiGG_03590 | 0 | 11 | 3.377482 | chorismate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03515 | PF04335 | 29 | 0.028 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03540 | TATBPROTEIN | 169 | 3e-56 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03585 | RTXTOXIND | 42 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 10 | CGSHiGG_03885 | CGSHiGG_04050 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_03885 | 7 | 20 | -7.167649 | single-stranded DNA-binding protein | |
| CGSHiGG_03890 | 9 | 22 | -8.359666 | hypothetical protein | |
| CGSHiGG_03915 | 5 | 22 | -6.083727 | hypothetical protein | |
| CGSHiGG_03920 | 4 | 19 | -5.711241 | patatin | |
| CGSHiGG_03925 | 2 | 17 | -5.941440 | hypothetical protein | |
| CGSHiGG_03930 | 3 | 17 | -5.685429 | hypothetical protein | |
| CGSHiGG_03935 | 1 | 15 | -2.601713 | hypothetical protein | |
| CGSHiGG_03950 | 1 | 17 | -2.572824 | TonB | |
| CGSHiGG_03955 | 1 | 14 | -3.350818 | biopolymer transport protein | |
| CGSHiGG_03960 | 0 | 17 | -3.059337 | transport protein ExbB | |
| CGSHiGG_03965 | 0 | 19 | -2.523982 | thioredoxin-dependent thiol peroxidase | |
| CGSHiGG_03970 | 3 | 19 | 0.692911 | dihydrodipicolinate synthase | |
| CGSHiGG_03975 | 4 | 22 | 1.193015 | lipoprotein | |
| CGSHiGG_03980 | 4 | 25 | 2.266736 | hypothetical protein | |
| CGSHiGG_03985 | 4 | 27 | 2.562997 | hypothetical protein | |
| CGSHiGG_03990 | 4 | 27 | 3.102821 | hypothetical protein | |
| CGSHiGG_03995 | 5 | 28 | 3.360769 | hypothetical protein | |
| CGSHiGG_04000 | 2 | 30 | 2.429106 | hypothetical protein | |
| CGSHiGG_04005 | 2 | 30 | -0.413812 | hypothetical protein | |
| CGSHiGG_04010 | 5 | 26 | -3.783718 | hypothetical protein | |
| CGSHiGG_04015 | 7 | 25 | -6.375586 | hypothetical protein | |
| CGSHiGG_04020 | 8 | 25 | -7.241056 | hypothetical protein | |
| CGSHiGG_04025 | 8 | 24 | -8.329173 | hypothetical protein | |
| CGSHiGG_04040 | 7 | 21 | -5.750628 | hypothetical protein | |
| CGSHiGG_04045 | 4 | 17 | -3.826929 | hypothetical protein | |
| CGSHiGG_04050 | 2 | 15 | -1.618439 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03950 | TONBPROTEIN | 150 | 9e-47 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03975 | PF06291 | 28 | 0.011 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03990 | ANTHRAXTOXNA | 27 | 0.011 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 11 | CGSHiGG_04700 | CGSHiGG_05115 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_04700 | 2 | 16 | -1.759047 | cysteine desulfurase | |
| CGSHiGG_04705 | 1 | 18 | -0.916585 | hypothetical protein | |
| CGSHiGG_04710 | 1 | 18 | -0.778289 | hypothetical protein | |
| CGSHiGG_04715 | 1 | 19 | 0.606168 | hypothetical protein | |
| CGSHiGG_04720 | 0 | 19 | 1.501216 | hypothetical protein | |
| CGSHiGG_04735 | 1 | 18 | 2.151841 | hypothetical protein | |
| CGSHiGG_04740 | 1 | 20 | 2.693738 | hypothetical protein | |
| CGSHiGG_04745 | 0 | 23 | 4.695387 | hypothetical protein | |
| CGSHiGG_04750 | 0 | 23 | 5.200132 | hypothetical protein | |
| CGSHiGG_04755 | 1 | 25 | 4.844254 | hypothetical protein | |
| CGSHiGG_04760 | 1 | 23 | 5.161381 | hypothetical protein | |
| CGSHiGG_04765 | 2 | 23 | 5.647584 | hypothetical protein | |
| CGSHiGG_04770 | 2 | 23 | 5.464810 | hypothetical protein | |
| CGSHiGG_04775 | 0 | 26 | 4.707757 | hypothetical protein | |
| CGSHiGG_04780 | 0 | 26 | 4.749265 | hypothetical protein | |
| CGSHiGG_04785 | 1 | 26 | 5.504190 | hypothetical protein | |
| CGSHiGG_04790 | 2 | 29 | 5.258417 | hypothetical protein | |
| CGSHiGG_04795 | 2 | 31 | 5.341738 | hypothetical protein | |
| CGSHiGG_04800 | 3 | 31 | 6.223764 | hypothetical protein | |
| CGSHiGG_04805 | 3 | 28 | 6.245270 | hypothetical protein | |
| CGSHiGG_04810 | 2 | 26 | 5.289649 | hypothetical protein | |
| CGSHiGG_04815 | 1 | 24 | 4.786303 | hypothetical protein | |
| CGSHiGG_04820 | 1 | 25 | 4.816509 | hypothetical protein | |
| CGSHiGG_04825 | 1 | 26 | 4.287073 | hypothetical protein | |
| CGSHiGG_04830 | 2 | 27 | 3.638067 | hypothetical protein | |
| CGSHiGG_04835 | 2 | 24 | 1.679868 | hypothetical protein | |
| CGSHiGG_04840 | 2 | 26 | 2.048912 | hypothetical protein | |
| CGSHiGG_04845 | 2 | 28 | 1.413739 | hypothetical protein | |
| CGSHiGG_04850 | 3 | 31 | 0.015627 | hypothetical protein | |
| CGSHiGG_04855 | 3 | 30 | 0.545286 | hypothetical protein | |
| CGSHiGG_04860 | 1 | 31 | 1.114861 | hypothetical protein | |
| CGSHiGG_04865 | -1 | 33 | 3.679031 | hypothetical protein | |
| CGSHiGG_04870 | 0 | 28 | 2.517222 | hypothetical protein | |
| CGSHiGG_04875 | -1 | 25 | 3.034464 | hypothetical protein | |
| CGSHiGG_04880 | 1 | 26 | 2.992588 | hypothetical protein | |
| CGSHiGG_04885 | 0 | 29 | 2.702647 | hypothetical protein | |
| CGSHiGG_04890 | 1 | 31 | 2.766470 | hypothetical protein | |
| CGSHiGG_04895 | 2 | 35 | 3.457476 | hypothetical protein | |
| CGSHiGG_04900 | 2 | 36 | 3.675489 | hypothetical protein | |
| CGSHiGG_04915 | 3 | 34 | 1.065490 | hypothetical protein | |
| CGSHiGG_04920 | 4 | 30 | 1.158373 | hypothetical protein | |
| CGSHiGG_04925 | 4 | 27 | 0.656852 | hypothetical protein | |
| CGSHiGG_04930 | 4 | 28 | 1.326933 | hypothetical protein | |
| CGSHiGG_04935 | 5 | 24 | 0.050119 | hypothetical protein | |
| CGSHiGG_04940 | 3 | 22 | -0.663286 | hypothetical protein | |
| CGSHiGG_04945 | 3 | 26 | 1.171237 | hypothetical protein | |
| CGSHiGG_04950 | 4 | 28 | 1.416765 | hypothetical protein | |
| CGSHiGG_04955 | 4 | 28 | 1.913803 | hypothetical protein | |
| CGSHiGG_04960 | 2 | 27 | 1.636253 | hypothetical protein | |
| CGSHiGG_04965 | 0 | 27 | 1.971571 | hypothetical protein | |
| CGSHiGG_04970 | -1 | 32 | 3.286092 | hypothetical protein | |
| CGSHiGG_04975 | -1 | 27 | 3.165812 | hypothetical protein | |
| CGSHiGG_04980 | 0 | 26 | 2.640023 | hypothetical protein | |
| CGSHiGG_04985 | 0 | 27 | 2.102905 | hypothetical protein | |
| CGSHiGG_04990 | 2 | 28 | 2.000185 | hypothetical protein | |
| CGSHiGG_04995 | 2 | 29 | 4.032468 | hypothetical protein | |
| CGSHiGG_05000 | 2 | 29 | 3.370239 | hypothetical protein | |
| CGSHiGG_05005 | 0 | 28 | 3.130249 | recombination associated protein | |
| CGSHiGG_05010 | 2 | 25 | 2.292573 | hypothetical protein | |
| CGSHiGG_05015 | 2 | 25 | 3.269869 | hypothetical protein | |
| CGSHiGG_05020 | 2 | 25 | 3.145575 | hypothetical protein | |
| CGSHiGG_05025 | 2 | 22 | -0.614185 | hypothetical protein | |
| CGSHiGG_05030 | 0 | 23 | -0.182128 | hypothetical protein | |
| CGSHiGG_05035 | 0 | 24 | 1.090907 | hypothetical protein | |
| CGSHiGG_05040 | -1 | 23 | 2.178419 | hypothetical protein | |
| CGSHiGG_05045 | -1 | 16 | 2.286955 | hypothetical protein | |
| CGSHiGG_05050 | 2 | 16 | 2.995755 | hypothetical protein | |
| CGSHiGG_05055 | 2 | 15 | 2.838641 | hypothetical protein | |
| CGSHiGG_05060 | 3 | 15 | 2.672145 | hypothetical protein | |
| CGSHiGG_05065 | 3 | 17 | 2.265828 | **hypothetical protein | |
| CGSHiGG_05070 | 2 | 18 | 1.836242 | translocation protein TolB | |
| CGSHiGG_05075 | 4 | 18 | 0.238302 | cell envelope integrity inner membrane protein | |
| CGSHiGG_05080 | 2 | 17 | -4.027928 | colicin uptake protein TolR | |
| CGSHiGG_05095 | -1 | 12 | -2.860677 | hypothetical protein | |
| CGSHiGG_05110 | -1 | 11 | -2.665983 | hypothetical protein | |
| CGSHiGG_05115 | 0 | 10 | -3.045898 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_04855 | BACINVASINB | 25 | 0.019 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_04900 | FbpA_PF05833 | 28 | 0.033 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_04970 | 60KDINNERMP | 31 | 0.006 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_05000 | PF00577 | 28 | 0.049 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_05065 | OMPADOMAIN | 108 | 4e-31 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_05075 | IGASERPTASE | 64 | 6e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 12 | CGSHiGG_05635 | CGSHiGG_05685 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_05635 | 2 | 20 | -0.147191 | hypothetical protein | |
| CGSHiGG_05640 | 2 | 19 | 0.396695 | imidazole glycerol phosphate synthase subunit | |
| CGSHiGG_05645 | 3 | 21 | 0.275843 | F0F1 ATP synthase subunit epsilon | |
| CGSHiGG_05650 | 2 | 24 | 0.329351 | F0F1 ATP synthase subunit beta | |
| CGSHiGG_05655 | -1 | 19 | -0.568988 | F0F1 ATP synthase subunit gamma | |
| CGSHiGG_05660 | 1 | 19 | -0.903544 | F0F1 ATP synthase subunit alpha | |
| CGSHiGG_05665 | 1 | 15 | -3.103261 | F0F1 ATP synthase subunit delta | |
| CGSHiGG_05670 | 0 | 16 | -3.790098 | F0F1 ATP synthase subunit B | |
| CGSHiGG_05675 | -1 | 14 | -3.320332 | F0F1 ATP synthase subunit C | |
| CGSHiGG_05680 | -1 | 19 | -3.330735 | F0F1 ATP synthase subunit A | |
| CGSHiGG_05685 | -2 | 21 | -3.275550 | F0F1 ATP synthase subunit I |
| 13 | CGSHiGG_05920 | CGSHiGG_05995 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_05920 | -1 | 19 | 3.154888 | hypothetical protein | |
| CGSHiGG_05925 | 0 | 18 | 4.279277 | aspartate ammonia-lyase | |
| CGSHiGG_05930 | 0 | 23 | 5.862227 | urease accessory protein UreH | |
| CGSHiGG_05935 | 0 | 22 | 5.661984 | urease accessory protein | |
| CGSHiGG_05940 | 0 | 17 | 4.747055 | urease accessory protein UreF | |
| CGSHiGG_05945 | 0 | 19 | 4.081163 | urease accessory protein UreE | |
| CGSHiGG_05950 | 1 | 24 | 4.037051 | urease subunit alpha | |
| CGSHiGG_05965 | 3 | 30 | 2.349314 | urease subunit gamma | |
| CGSHiGG_05970 | 4 | 32 | 2.419773 | co-chaperonin GroES | |
| CGSHiGG_05975 | 3 | 31 | 2.469357 | chaperonin GroEL | |
| CGSHiGG_05980 | 7 | 23 | -1.866866 | 50S ribosomal protein L9 | |
| CGSHiGG_05985 | 6 | 20 | -4.314860 | 30S ribosomal protein S18 | |
| CGSHiGG_05990 | 6 | 20 | -4.903925 | primosomal replication protein N | |
| CGSHiGG_05995 | 2 | 18 | -3.032581 | 30S ribosomal protein S6 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_05950 | UREASE | 1040 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 14 | CGSHiGG_07815 | CGSHiGG_07895 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_07815 | 2 | 12 | 2.167526 | DNA polymerase I | |
| CGSHiGG_07820 | 2 | 10 | 0.396204 | 23S rRNA (guanosine-2'-O-)-methyltransferase | |
| CGSHiGG_07825 | 1 | 10 | -0.021825 | 23S rRNA (guanosine-2'-O-)-methyltransferase | |
| CGSHiGG_07830 | 1 | 11 | -1.455232 | hypothetical protein | |
| CGSHiGG_07835 | 0 | 10 | -2.942296 | pyridoxamine 5'-phosphate oxidase | |
| CGSHiGG_07840 | 2 | 13 | -4.565068 | GTP-binding protein TypA/ BipA | |
| CGSHiGG_07845 | 5 | 18 | -7.681217 | CMP-neu5Ac--lipooligosaccharide alpha 2-3 | |
| CGSHiGG_07850 | 6 | 21 | -8.502073 | glutamine synthetase | |
| CGSHiGG_07855 | 13 | 29 | -10.897750 | hypothetical protein | |
| CGSHiGG_07875 | 11 | 27 | -9.261065 | hypothetical protein | |
| CGSHiGG_07880 | 7 | 24 | -7.015041 | hypothetical protein | |
| CGSHiGG_07885 | 5 | 24 | -6.156319 | putative polysaccharide polymerase | |
| CGSHiGG_07890 | 4 | 19 | -3.921327 | N-acetylneuraminic acid synthase-like protein | |
| CGSHiGG_07895 | 3 | 15 | -1.794779 | undecaprenyl-phosphate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_07815 | HTHFIS | 38 | 1e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_07840 | TCRTETOQM | 175 | 2e-49 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_07845 | PF08280 | 29 | 0.033 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_07855 | TYPE4SSCAGA | 27 | 0.032 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 15 | CGSHiGG_08575 | CGSHiGG_08680 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_08575 | 4 | 22 | -3.359959 | hypothetical protein | |
| CGSHiGG_08580 | 2 | 18 | -2.177621 | transferrin-binding protein 2 | |
| CGSHiGG_08585 | 0 | 16 | -2.518023 | chromosomal replication initiation protein | |
| CGSHiGG_08590 | 0 | 16 | -3.079054 | 50S ribosomal protein L34 | |
| CGSHiGG_08595 | -1 | 16 | -3.188096 | ribonuclease P | |
| CGSHiGG_08600 | -1 | 14 | -2.578722 | hypothetical protein | |
| CGSHiGG_08615 | 0 | 13 | -2.447793 | tRNA modification GTPase TrmE | |
| CGSHiGG_08620 | -1 | 12 | -2.677147 | peptidyl-prolyl cis-trans isomerase D | |
| CGSHiGG_08625 | -2 | 14 | -2.191135 | tRNA modification GTPase TrmE | |
| CGSHiGG_08630 | 0 | 11 | 1.215706 | lipoprotein signal peptidase | |
| CGSHiGG_08635 | 0 | 11 | 1.692760 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |
| CGSHiGG_08640 | 2 | 11 | 1.198305 | hypothetical protein | |
| CGSHiGG_08655 | 4 | 12 | 1.294313 | 3-hydroxyisobutyrate dehydrogenase | |
| CGSHiGG_08660 | 2 | 9 | 0.444374 | hypothetical protein | |
| CGSHiGG_08665 | 2 | 9 | 0.506279 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |
| CGSHiGG_08670 | 2 | 10 | 0.065742 | putative aldolase | |
| CGSHiGG_08675 | 2 | 10 | -0.239881 | hypothetical protein | |
| CGSHiGG_08680 | 2 | 12 | -0.186865 | gluconate transport protein GntT |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08680 | PHAGEIV | 29 | 0.038 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. | |||||
| 16 | CGSHiGG_08735 | CGSHiGG_08915 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_08735 | 3 | 20 | -3.767103 | 3-keto-L-gulonate-6-phosphate decarboxylase | |
| CGSHiGG_08750 | 3 | 19 | -3.106321 | putative L-xylulose 5-phosphate 3-epimerase | |
| CGSHiGG_08755 | 3 | 19 | -3.163401 | L-xylulose kinase | |
| CGSHiGG_08760 | 2 | 16 | -2.361449 | hypothetical protein | |
| CGSHiGG_08765 | 1 | 15 | -1.929435 | hypothetical protein | |
| CGSHiGG_08770 | 1 | 12 | -1.776533 | hypothetical protein | |
| CGSHiGG_08775 | -1 | 12 | -2.056657 | 2,3-diketo-L-gulonate reductase | |
| CGSHiGG_08780 | -2 | 11 | -2.841112 | L-ribulose-5-phosphate 4-epimerase | |
| CGSHiGG_08785 | -2 | 11 | -2.032082 | phosphoserine phosphatase | |
| CGSHiGG_08790 | -1 | 13 | -2.266379 | putative nucleotide-binding protein | |
| CGSHiGG_08795 | 0 | 15 | -2.114156 | magnesium/nickel/cobalt transporter CorA | |
| CGSHiGG_08800 | 2 | 18 | -2.663688 | integral membrane protein | |
| CGSHiGG_08805 | 1 | 19 | -1.197375 | hypothetical protein | |
| CGSHiGG_08810 | 0 | 21 | -1.452716 | hypothetical protein | |
| CGSHiGG_08815 | 1 | 21 | -1.604824 | hypothetical protein | |
| CGSHiGG_08820 | 3 | 18 | -1.159201 | hypothetical protein | |
| CGSHiGG_08845 | 3 | 19 | -0.764686 | hypothetical protein | |
| CGSHiGG_08850 | 4 | 15 | -0.479833 | B12-dependent methionine synthase | |
| CGSHiGG_08855 | 4 | 15 | -0.486035 | twin-argninine leader-binding protein DmsD | |
| CGSHiGG_08860 | 4 | 15 | -0.131923 | anaerobic dimethyl sulfoxide reductase chain C | |
| CGSHiGG_08865 | 3 | 12 | 0.055297 | anaerobic dimethyl sulfoxide reductase chain B | |
| CGSHiGG_08870 | 1 | 13 | 0.242859 | anaerobic dimethyl sulfoxide reductase chain A | |
| CGSHiGG_08875 | 0 | 12 | -0.397777 | anaerobic dimethyl sulfoxide reductase chain A | |
| CGSHiGG_08880 | -1 | 14 | -0.212021 | hypothetical protein | |
| CGSHiGG_08885 | -2 | 14 | -0.953054 | hypothetical protein | |
| CGSHiGG_08890 | 0 | 15 | -0.740046 | hypothetical protein | |
| CGSHiGG_08895 | 0 | 15 | -1.294379 | ABC transporter ATP-binding protein | |
| CGSHiGG_08900 | 2 | 19 | -1.425995 | transcriptional regulator AraC family protein | |
| CGSHiGG_08905 | 3 | 20 | -0.569428 | hypothetical protein | |
| CGSHiGG_08910 | 4 | 20 | -0.582945 | hypothetical protein | |
| CGSHiGG_08915 | 4 | 19 | -0.857715 | putative type III restriction-modification |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08755 | PF03309 | 29 | 0.031 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| 17 | CGSHiGG_09540 | CGSHiGG_09580 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_09540 | 2 | 15 | -2.736718 | hypothetical protein | |
| CGSHiGG_09545 | 2 | 14 | -2.330500 | hypothetical protein | |
| CGSHiGG_09550 | 1 | 15 | -1.515487 | para-aminobenzoate synthase component I | |
| CGSHiGG_09555 | 1 | 13 | -0.692906 | putative anthranilate synthase component II | |
| CGSHiGG_09560 | 1 | 12 | -0.038453 | S-adenosylmethionine synthetase | |
| CGSHiGG_09565 | 3 | 14 | -1.157901 | hypothetical protein | |
| CGSHiGG_09570 | 2 | 14 | -0.712916 | opacity protein | |
| CGSHiGG_09575 | 3 | 16 | -0.772121 | hypothetical protein | |
| CGSHiGG_09580 | 2 | 17 | -1.012805 | arginine transporter permease subunit ArtM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_09570 | OMPADOMAIN | 28 | 0.023 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_09575 | PF03895 | 39 | 5e-07 | Serum resistance protein DsrA. | |
>PF03895#Serum resistance protein DsrA. | |||||
| 18 | CGSHiGG_03225 | CGSHiGG_03280 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_03225 | -1 | 12 | 0.713307 | ferric transporter ATP-binding subunit | |
| CGSHiGG_03230 | -2 | 11 | 0.728138 | ferric transport system permease protein FbpB | |
| CGSHiGG_03235 | -1 | 10 | 0.511847 | ferric transporter ATP-binding subunit | |
| CGSHiGG_03240 | 0 | 9 | 0.114897 | uridine kinase | |
| CGSHiGG_03245 | -2 | 12 | -0.148958 | deoxycytidine triphosphate deaminase | |
| CGSHiGG_03255 | -2 | 10 | -0.163257 | sugar efflux transporter | |
| CGSHiGG_03260 | -2 | 12 | -0.198793 | GTP-binding protein EngA | |
| CGSHiGG_03265 | -2 | 16 | -0.915788 | **DNA polymerase III subunit epsilon | |
| CGSHiGG_03270 | -1 | 16 | -0.748537 | ribonuclease H | |
| CGSHiGG_03275 | -1 | 13 | -0.099733 | Outer membrane protein P2 | |
| CGSHiGG_03280 | -2 | 13 | 0.816548 | N-acetylglucosamine-6-phosphate deacetylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03225 | PF05272 | 32 | 0.003 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03255 | TCRTETB | 55 | 2e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03260 | MYCMG045 | 32 | 0.006 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03265 | cloacin | 29 | 0.023 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03275 | ECOLIPORIN | 44 | 6e-07 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_03280 | UREASE | 33 | 0.002 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 19 | CGSHiGG_06890 | CGSHiGG_06920 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_06890 | -2 | 12 | 0.240836 | ATP-dependent protease ATP-binding subunit ClpX | |
| CGSHiGG_06895 | -1 | 12 | 0.962813 | preprotein translocase subunit SecE | |
| CGSHiGG_06900 | -1 | 12 | 1.180990 | transcription antitermination protein NusG | |
| CGSHiGG_06905 | -2 | 13 | 0.425969 | lipoprotein | |
| CGSHiGG_06910 | -2 | 14 | -0.020659 | transcription antitermination protein NusG | |
| CGSHiGG_06915 | -1 | 16 | -0.504735 | heat shock protein HtpX | |
| CGSHiGG_06920 | -2 | 14 | -1.731927 | sulfur transfer protein SirA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_06890 | HTHFIS | 34 | 9e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_06895 | SECETRNLCASE | 139 | 9e-46 | Bacterial translocase SecE signature. | |
>SECETRNLCASE#Bacterial translocase SecE signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_06905 | VACJLIPOPROT | 319 | e-113 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_06920 | PF01206 | 90 | 5e-28 | SirA family protein | |
>PF01206#SirA family protein | |||||
| 20 | CGSHiGG_08020 | CGSHiGG_08120 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_08020 | 0 | 10 | -0.564490 | transcriptional repressor | |
| CGSHiGG_08025 | 0 | 10 | 0.002705 | putative membrane-fusion protein | |
| CGSHiGG_08030 | -1 | 9 | 0.018359 | acriflavine resistance protein | |
| CGSHiGG_08035 | -2 | 12 | -0.095618 | cell division protein | |
| CGSHiGG_08050 | -1 | 13 | 0.619947 | multidrug resistance protein A | |
| CGSHiGG_08055 | -1 | 17 | 1.286960 | dihydrofolate reductase | |
| CGSHiGG_08060 | 0 | 17 | 1.214256 | gamma-glutamyl kinase | |
| CGSHiGG_08065 | -1 | 20 | 1.009108 | dinucleoside polyphosphate hydrolase | |
| CGSHiGG_08070 | -2 | 15 | 1.337885 | hypothetical protein | |
| CGSHiGG_08085 | 0 | 16 | 1.387938 | thymidylate synthase | |
| CGSHiGG_08090 | -1 | 11 | 0.614028 | hypothetical protein | |
| CGSHiGG_08095 | 0 | 11 | -0.154934 | hypothetical protein | |
| CGSHiGG_08100 | 0 | 9 | 0.377405 | hypothetical protein | |
| CGSHiGG_08105 | 0 | 12 | 0.539249 | preprotein translocase subunit SecA | |
| CGSHiGG_08110 | -2 | 13 | -0.045054 | mutator protein MutT | |
| CGSHiGG_08115 | -1 | 15 | -0.399437 | glutathione-regulated potassium-efflux system | |
| CGSHiGG_08120 | 0 | 19 | -0.656125 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08020 | HTHTETR | 58 | 8e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08025 | RTXTOXIND | 53 | 1e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08030 | ACRIFLAVINRP | 896 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08035 | PF04647 | 31 | 0.003 | Accessory gene regulator B | |
>PF04647#Accessory gene regulator B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08050 | RTXTOXIND | 81 | 1e-18 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08060 | CARBMTKINASE | 37 | 6e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08095 | FbpA_PF05833 | 29 | 0.003 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08100 | PF06580 | 26 | 0.023 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08105 | SECA | 1328 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_08120 | ADHESNFAMILY | 30 | 0.007 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 21 | CGSHiGG_09225 | CGSHiGG_09260 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CGSHiGG_09225 | 0 | 15 | 1.863514 | ADP-L-glycero-D-mannoheptose-6-epimerase | |
| CGSHiGG_09230 | -1 | 16 | 2.275245 | ADP-L-glycero-D-mannoheptose-6-epimerase | |
| CGSHiGG_09245 | 0 | 16 | 2.884163 | deoxyribose-phosphate aldolase | |
| CGSHiGG_09250 | 1 | 18 | 2.378927 | ribosome biogenesis GTP-binding protein YsxC | |
| CGSHiGG_09255 | -1 | 18 | 2.388561 | D-xylose transport permease protein | |
| CGSHiGG_09260 | -3 | 19 | 2.773800 | GTPase EngB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_09225 | NUCEPIMERASE | 99 | 6e-26 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_09230 | SECA | 28 | 0.022 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_09245 | HTHFIS | 38 | 1e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CGSHiGG_09260 | HTHFIS | 30 | 0.011 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||