| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | Bamb_0001 | Bamb_0009 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0001 | 3 | 30 | -7.400031 | chromosomal replication initiation protein | |
| Bamb_0002 | 4 | 33 | -7.166884 | DNA polymerase III subunit beta | |
| Bamb_0003 | 4 | 36 | -7.089174 | DNA gyrase subunit B | |
| Bamb_0004 | 5 | 44 | -7.100722 | GTPase subunit of restriction endonuclease-like | |
| Bamb_0005 | 3 | 40 | -4.976367 | hypothetical protein | |
| Bamb_0006 | 1 | 31 | -1.524002 | cytochrome B561 | |
| Bamb_0007 | -1 | 24 | -1.087371 | catalase domain-containing protein | |
| Bamb_0008 | -1 | 23 | -2.343105 | ECF subfamily RNA polymerase sigma-24 factor | |
| Bamb_0009 | 1 | 29 | -3.293947 | transmembrane anti-sigma factor |
| 2 | Bamb_0027 | Bamb_0043 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0027 | 2 | 13 | 0.425162 | flagellar biosynthetic protein FliR | |
| Bamb_0028 | 2 | 12 | 0.010912 | flagellar biosynthesis protein FliQ | |
| Bamb_0029 | 1 | 13 | -0.126569 | flagellar biosynthesis protein FliP | |
| Bamb_0030 | 0 | 13 | 1.137321 | flagellar biosynthesis protein, FliO | |
| Bamb_0031 | 2 | 14 | 0.488108 | flagellar motor switch protein FliN | |
| Bamb_0032 | 1 | 14 | 0.358797 | flagellar motor switch protein FliM | |
| Bamb_0033 | 2 | 13 | 1.309928 | flagellar basal body-associated protein FliL | |
| Bamb_0034 | 2 | 13 | 1.585244 | LrgB family protein | |
| Bamb_0035 | 0 | 11 | 2.906016 | LrgA family protein | |
| Bamb_0036 | 0 | 12 | 2.771945 | LysR family transcriptional regulator | |
| Bamb_0037 | -1 | 11 | 2.790368 | EmrB/QacA family drug resistance transporter | |
| Bamb_0038 | -1 | 10 | 4.526439 | MarR family transcriptional regulator | |
| Bamb_0039 | -1 | 10 | 4.568151 | hypothetical protein | |
| Bamb_0040 | -1 | 9 | 4.510345 | RND efflux system outer membrane lipoprotein | |
| Bamb_0041 | 0 | 10 | 4.010528 | hypothetical protein | |
| Bamb_0042 | 0 | 8 | 4.000211 | general secretion pathway M protein | |
| Bamb_0043 | 0 | 9 | 3.382791 | general secretion pathway protein L |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0027 | TYPE3IMRPROT | 156 | 6e-49 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0028 | TYPE3IMQPROT | 66 | 4e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0029 | FLGBIOSNFLIP | 289 | e-101 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0031 | FLGMOTORFLIN | 133 | 7e-43 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0032 | FLGMOTORFLIM | 272 | 4e-92 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0037 | TCRTETB | 120 | 1e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 3 | Bamb_0084 | Bamb_0095 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0084 | -2 | 16 | -3.114112 | tRNA uridine 5-carboxymethylaminomethyl | |
| Bamb_0085 | 0 | 20 | -3.096494 | 16S rRNA methyltransferase GidB | |
| Bamb_0086 | 1 | 17 | -3.335457 | cobyrinic acid a,c-diamide synthase | |
| Bamb_0087 | 2 | 19 | -3.549242 | parB-like partition proteins | |
| Bamb_0088 | 4 | 22 | -4.277061 | citrate transporter | |
| Bamb_0089 | 4 | 27 | -5.248511 | hypothetical protein | |
| Bamb_0090 | 2 | 21 | -4.442926 | F0F1-type ATP synthase subunit I-like protein | |
| Bamb_0091 | 1 | 21 | -4.901006 | F0F1 ATP synthase subunit A | |
| Bamb_0092 | 2 | 26 | -4.951067 | F0F1 ATP synthase subunit C | |
| Bamb_0093 | 3 | 23 | -4.541689 | F0F1 ATP synthase subunit B | |
| Bamb_0094 | 0 | 17 | -3.555560 | F0F1 ATP synthase subunit delta | |
| Bamb_0095 | 0 | 16 | -3.458925 | F0F1 ATP synthase subunit alpha |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0094 | FLGMOTORFLIN | 27 | 0.035 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| 4 | Bamb_0202 | Bamb_0209 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0202 | 3 | 23 | -3.472371 | hypothetical protein | |
| Bamb_0203 | 4 | 29 | -5.663588 | phosphoheptose isomerase | |
| Bamb_0204 | 5 | 32 | -6.515528 | transport-associated protein | |
| Bamb_0205 | 6 | 36 | -7.435703 | class I cytochrome c | |
| Bamb_0207 | 5 | 36 | -6.919099 | *Rhs element Vgr protein | |
| Bamb_0208 | 4 | 34 | -4.790700 | hypothetical protein | |
| Bamb_0209 | 3 | 35 | -4.855599 | hypothetical protein |
| 5 | Bamb_0356 | Bamb_0382 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0356 | 0 | 9 | -3.697342 | Sec-independent protein translocase subunit | |
| Bamb_0357 | 0 | 10 | -4.299068 | peptidase S1 and S6, chymotrypsin/Hap | |
| Bamb_0358 | 1 | 13 | -5.095941 | hypothetical protein | |
| Bamb_0359 | 3 | 18 | -6.757285 | ubiquinol-cytochrome c reductase, iron-sulfur | |
| Bamb_0360 | 3 | 18 | -7.005155 | cytochrome b/b6 domain-containing protein | |
| Bamb_0361 | 4 | 20 | -6.904794 | cytochrome c1 | |
| Bamb_0362 | 2 | 18 | -4.162802 | glutathione S-transferase domain-containing | |
| Bamb_0363 | 0 | 23 | -4.101022 | ClpXP protease specificity-enhancing factor | |
| Bamb_0364 | 0 | 25 | -4.485264 | *hypothetical protein | |
| Bamb_0365 | -1 | 26 | -4.608970 | hypothetical protein | |
| Bamb_0366 | 0 | 28 | -5.321741 | extracellular solute-binding protein | |
| Bamb_0367 | 0 | 30 | -5.526548 | Rhs element Vgr protein | |
| Bamb_0368 | 1 | 38 | -8.052664 | YD repeat-containing protein | |
| Bamb_0369 | 7 | 72 | -17.622880 | hypothetical protein | |
| Bamb_0370 | 6 | 66 | -16.277524 | hypothetical protein | |
| Bamb_0372 | 4 | 45 | -10.764371 | hypothetical protein | |
| Bamb_0373 | -1 | 22 | -5.704411 | hypothetical protein | |
| Bamb_0374 | 0 | 22 | -5.391705 | hypothetical protein | |
| Bamb_0375 | 1 | 17 | -3.512947 | hypothetical protein | |
| Bamb_0376 | 2 | 10 | -2.502923 | hypothetical protein | |
| Bamb_0377 | 3 | 9 | -2.776309 | hypothetical protein | |
| Bamb_0378 | 2 | 9 | -3.139485 | hypothetical protein | |
| Bamb_0379 | 4 | 12 | -3.969520 | hypothetical protein | |
| Bamb_0380 | 4 | 9 | -3.018840 | hypothetical protein | |
| Bamb_0381 | 4 | 9 | -2.525068 | hypothetical protein | |
| Bamb_0382 | 2 | 10 | -1.086044 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0357 | V8PROTEASE | 68 | 7e-15 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0367 | RTXTOXINA | 39 | 1e-04 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 6 | Bamb_0667 | Bamb_0675 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0667 | 4 | 15 | 1.882590 | AraC family transcriptional regulator | |
| Bamb_0668 | 4 | 17 | 0.904256 | YiaAB two helix domain-containing protein | |
| Bamb_0669 | 5 | 20 | 1.039408 | glycosyl transferase family protein | |
| Bamb_0670 | 4 | 21 | 0.328116 | hypothetical protein | |
| Bamb_0671 | 4 | 20 | -0.261214 | hypothetical protein | |
| Bamb_0672 | 2 | 16 | -1.130217 | hypothetical protein | |
| Bamb_0673 | 3 | 12 | -1.020522 | PA-phosphatase-like phosphoesterase | |
| Bamb_0674 | 2 | 10 | -1.127819 | fatty acid desaturase | |
| Bamb_0675 | 2 | 10 | -1.413918 | *hypothetical protein |
| 7 | Bamb_0715 | Bamb_0764 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0715 | 0 | 13 | 3.081864 | LysR family transcriptional regulator | |
| Bamb_0716 | 0 | 13 | 3.545667 | DSBA oxidoreductase | |
| Bamb_0717 | -1 | 13 | 3.533458 | TRAP-type transport system periplasmic | |
| Bamb_0718 | 0 | 12 | 3.830636 | transport-associated protein | |
| Bamb_0719 | -1 | 12 | 3.584675 | hypothetical protein | |
| Bamb_0720 | 0 | 13 | 3.676492 | hypothetical protein | |
| Bamb_0721 | -1 | 11 | 3.195319 | DSBA oxidoreductase | |
| Bamb_0722 | 0 | 10 | 2.914395 | YheO domain-containing protein | |
| Bamb_0723 | 2 | 10 | 3.939275 | ornithine cyclodeaminase/mu-crystallin | |
| Bamb_0724 | 1 | 11 | 3.257627 | extracellular solute-binding protein | |
| Bamb_0725 | 3 | 12 | 3.678301 | D-amino-acid dehydrogenase | |
| Bamb_0726 | 3 | 14 | 3.187619 | hypothetical protein | |
| Bamb_0727 | 2 | 12 | 2.689503 | ECF subfamily RNA polymerase sigma-24 factor | |
| Bamb_0728 | -2 | 18 | -0.252803 | transmembrane anti-sigma factor | |
| Bamb_0729 | -1 | 19 | -0.812202 | hypothetical protein | |
| Bamb_0730 | 0 | 22 | -1.607009 | hypothetical protein | |
| Bamb_0731 | -1 | 17 | 0.567879 | hypothetical protein | |
| Bamb_0732 | 1 | 18 | -0.201312 | co-chaperonin GroES | |
| Bamb_0733 | 0 | 16 | 0.213050 | chaperonin GroEL | |
| Bamb_0734 | -1 | 15 | 3.096637 | phosphomethylpyrimidine kinase type-1 | |
| Bamb_0735 | -2 | 13 | 2.335692 | rubredoxin-type Fe(Cys)4 protein | |
| Bamb_0736 | -2 | 12 | 3.305271 | hypothetical protein | |
| Bamb_0737 | -1 | 12 | 1.900230 | hypothetical protein | |
| Bamb_0738 | -2 | 11 | 2.381472 | Holliday junction resolvase-like protein | |
| Bamb_0739 | -2 | 8 | 0.659149 | bifunctional pyrimidine regulatory protein | |
| Bamb_0740 | -1 | 9 | -0.879398 | aspartate carbamoyltransferase catalytic | |
| Bamb_0741 | -1 | 14 | -1.624207 | dihydroorotase | |
| Bamb_0742 | 2 | 26 | -5.699218 | phospholipid/glycerol acyltransferase | |
| Bamb_0743 | 3 | 38 | -9.071891 | diadenosine tetraphosphatase | |
| Bamb_0744 | 4 | 49 | -12.097027 | ABC transporter | |
| Bamb_0745 | 4 | 54 | -12.515855 | ABC transporter-like protein | |
| Bamb_0746 | 3 | 52 | -12.048005 | hypothetical protein | |
| Bamb_0747 | 3 | 47 | -11.329265 | NAD-dependent epimerase/dehydratase | |
| Bamb_0748 | 2 | 46 | -10.818267 | FkbM family methyltransferase | |
| Bamb_0749 | 3 | 42 | -9.376158 | hypothetical protein | |
| Bamb_0750 | 1 | 30 | -6.776703 | hypothetical protein | |
| Bamb_0751 | 0 | 25 | -5.671661 | dTDP-glucose 4,6-dehydratase | |
| Bamb_0752 | 2 | 32 | -5.782787 | glucose-1-phosphate thymidylyltransferase | |
| Bamb_0753 | 3 | 34 | -6.204603 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| Bamb_0754 | 2 | 32 | -6.245109 | dTDP-4-dehydrorhamnose reductase | |
| Bamb_0755 | 1 | 31 | -6.277883 | mannose-1-phosphate | |
| Bamb_0756 | 1 | 31 | -6.130340 | hypothetical protein | |
| Bamb_0757 | 0 | 31 | -5.782344 | type 11 methyltransferase | |
| Bamb_0758 | 0 | 29 | -4.915549 | group 1 glycosyl transferase | |
| Bamb_0759 | 0 | 26 | -3.330056 | GDP-mannose 4,6-dehydratase | |
| Bamb_0760 | 1 | 25 | -2.899013 | NAD-dependent epimerase/dehydratase | |
| Bamb_0761 | 3 | 27 | -3.570007 | group 1 glycosyl transferase | |
| Bamb_0762 | 2 | 24 | -3.725706 | group 1 glycosyl transferase | |
| Bamb_0763 | 2 | 19 | -3.250479 | NAD-dependent epimerase/dehydratase | |
| Bamb_0764 | 1 | 17 | -3.083316 | glycosyl transferase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0741 | UREASE | 32 | 0.005 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0747 | NUCEPIMERASE | 98 | 2e-25 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0748 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0751 | NUCEPIMERASE | 176 | 9e-55 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0754 | NUCEPIMERASE | 49 | 7e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0757 | RTXTOXIND | 33 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0759 | NUCEPIMERASE | 97 | 4e-25 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0760 | NUCEPIMERASE | 122 | 2e-34 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0763 | NUCEPIMERASE | 114 | 2e-31 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 8 | Bamb_0860 | Bamb_0871 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0860 | -2 | 9 | -3.022768 | DNA-directed RNA polymerase subunit omega | |
| Bamb_0861 | -2 | 8 | -2.006240 | (p)ppGpp synthetase I SpoT/RelA | |
| Bamb_0862 | 2 | 15 | -0.968934 | ***transcription elongation factor GreB | |
| Bamb_0863 | 2 | 16 | -1.047929 | porin | |
| Bamb_0864 | 3 | 22 | -0.218898 | hypothetical protein | |
| Bamb_0865 | 4 | 13 | 0.620005 | cold-shock DNA-binding domain-containing | |
| Bamb_0866 | 1 | 11 | 1.781256 | DNA polymerase III subunit epsilon | |
| Bamb_0867 | 0 | 12 | 1.811031 | chorismate mutase | |
| Bamb_0868 | 2 | 11 | 1.344347 | hypothetical protein | |
| Bamb_0869 | 2 | 11 | 1.435563 | hypothetical protein | |
| Bamb_0870 | 2 | 9 | 1.286104 | TonB-dependent receptor | |
| Bamb_0871 | 5 | 9 | 1.224537 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0863 | ECOLNEIPORIN | 124 | 7e-35 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| 9 | Bamb_0896 | Bamb_0911 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0896 | 2 | 23 | -1.654848 | NADH dehydrogenase (quinone) | |
| Bamb_0897 | 3 | 34 | -4.198678 | NADH-ubiquinone oxidoreductase 24 kD | |
| Bamb_0898 | 4 | 38 | -5.853188 | molybdate metabolism transcriptional regulator | |
| Bamb_0899 | 6 | 47 | -8.721725 | hypothetical protein | |
| Bamb_0900 | 6 | 50 | -9.158224 | hypothetical protein | |
| Bamb_0901 | 6 | 52 | -10.321472 | hypothetical protein | |
| Bamb_0902 | 1 | 42 | -7.783480 | hypothetical protein | |
| Bamb_0903 | 3 | 40 | -7.256970 | hypothetical protein | |
| Bamb_0904 | 3 | 42 | -6.887714 | hypothetical protein | |
| Bamb_0905 | 4 | 44 | -7.874655 | hypothetical protein | |
| Bamb_0906 | 4 | 44 | -8.870964 | hypothetical protein | |
| Bamb_0907 | 6 | 39 | -6.999534 | hypothetical protein | |
| Bamb_0908 | 6 | 35 | -4.959153 | hypothetical protein | |
| Bamb_0909 | 4 | 27 | -4.686670 | phage transcriptional regulator AlpA | |
| Bamb_0910 | 5 | 25 | -4.896218 | hypothetical protein | |
| Bamb_0911 | 0 | 14 | -3.598213 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0905 | TCRTETOQM | 26 | 0.040 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 10 | Bamb_1053 | Bamb_1058 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1053 | 0 | 27 | -4.223506 | hypothetical protein | |
| Bamb_1054 | 2 | 30 | -6.009346 | polar amino acid ABC transporter inner membrane | |
| Bamb_1055 | 4 | 38 | -7.216483 | polar amino acid ABC transporter inner membrane | |
| Bamb_1056 | 4 | 29 | -6.189438 | ABC transporter-like protein | |
| Bamb_1057 | 3 | 25 | -4.914924 | AraC family transcriptional regulator | |
| Bamb_1058 | 1 | 18 | -3.659337 | transmembrane protein |
| 11 | Bamb_1121 | Bamb_1134 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1121 | 2 | 10 | 0.946087 | hypothetical protein | |
| Bamb_1122 | 3 | 10 | 1.653973 | hypothetical protein | |
| Bamb_1123 | 3 | 9 | 2.092719 | 3-methyl-2-oxobutanoate dehydrogenase | |
| Bamb_1124 | 3 | 10 | 1.790148 | transketolase, central region | |
| Bamb_1125 | 2 | 10 | 1.793947 | branched-chain alpha-keto acid dehydrogenase E2 | |
| Bamb_1126 | 1 | 10 | 1.554808 | dihydrolipoamide dehydrogenase | |
| Bamb_1127 | 1 | 10 | 1.727016 | nucleoside-diphosphate-sugar epimerase-like | |
| Bamb_1128 | 0 | 12 | 1.653737 | hypothetical protein | |
| Bamb_1129 | 1 | 10 | 2.077331 | cytosine/purines uracil thiamine allantoin | |
| Bamb_1130 | 0 | 11 | 3.209498 | LysR family transcriptional regulator | |
| Bamb_1131 | 1 | 12 | 3.756146 | major facilitator superfamily transporter | |
| Bamb_1132 | 0 | 11 | 4.001019 | allantoate amidohydrolase | |
| Bamb_1133 | -2 | 12 | 3.905299 | histone deacetylase superfamily protein | |
| Bamb_1134 | -1 | 11 | 3.202607 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1125 | IGASERPTASE | 31 | 0.011 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1134 | TCRTETA | 45 | 4e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 12 | Bamb_1146 | Bamb_1153 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1146 | 2 | 10 | 3.216244 | malonate transporter subunit MadM | |
| Bamb_1147 | 1 | 10 | 4.014270 | hypothetical protein | |
| Bamb_1148 | 2 | 11 | 5.647006 | malonate decarboxylase subunit delta | |
| Bamb_1149 | 1 | 10 | 5.640034 | malonate decarboxylase subunit beta | |
| Bamb_1150 | 3 | 9 | 5.881866 | malonate decarboxylase subunit gamma | |
| Bamb_1151 | 3 | 8 | 6.115598 | phosphoribosyl-dephospho-CoA transferase | |
| Bamb_1152 | 3 | 9 | 5.519198 | triphosphoribosyl-dephospho-CoA synthase | |
| Bamb_1153 | 2 | 9 | 4.750531 | acyl-carrier-protein S-malonyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1147 | ARGDEIMINASE | 30 | 0.021 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| 13 | Bamb_1177 | Bamb_1193 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1177 | -1 | 12 | -3.404067 | phosphate ABC transporter substrate-binding | |
| Bamb_1178 | 0 | 10 | -3.116594 | phosphate transporter permease subunit PstC | |
| Bamb_1179 | -1 | 10 | -2.503419 | phosphate transporter permease subunit PtsA | |
| Bamb_1180 | -2 | 8 | -2.103075 | phosphate transporter ATP-binding protein | |
| Bamb_1181 | -2 | 8 | -1.650098 | phosphate uptake regulator PhoU | |
| Bamb_1182 | -2 | 8 | -2.446933 | two component transcriptional regulator | |
| Bamb_1183 | -3 | 9 | -2.828486 | histidine kinase | |
| Bamb_1184 | -1 | 14 | -3.854442 | polyphosphate kinase | |
| Bamb_1185 | 2 | 35 | -6.621698 | Ppx/GppA phosphatase | |
| Bamb_1186 | 2 | 42 | -9.406781 | hypothetical protein | |
| Bamb_1187 | 3 | 46 | -9.368712 | hypothetical protein | |
| Bamb_1188 | 4 | 45 | -8.497245 | hypothetical protein | |
| Bamb_1189 | 5 | 48 | -8.929840 | hypothetical protein | |
| Bamb_1190 | 4 | 44 | -8.250513 | hypothetical protein | |
| Bamb_1191 | 4 | 38 | -7.206727 | Rhs element Vgr protein | |
| Bamb_1192 | 5 | 38 | -6.086927 | hypothetical protein | |
| Bamb_1193 | 6 | 36 | -5.422513 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1182 | HTHFIS | 86 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1183 | PF06580 | 40 | 1e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1191 | ICENUCLEATIN | 47 | 2e-07 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| 14 | Bamb_1203 | Bamb_1226 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1203 | 2 | 30 | -4.122642 | aldose 1-epimerase | |
| Bamb_1204 | 3 | 41 | -6.218380 | undecaprenyl pyrophosphate phosphatase | |
| Bamb_1205 | 4 | 46 | -6.107799 | *TIS1421-transposase orfA protein | |
| Bamb_1206 | 4 | 41 | -6.095950 | exonuclease | |
| Bamb_1207 | 3 | 33 | -4.550947 | hypothetical protein | |
| Bamb_1208 | 3 | 28 | -3.850152 | hypothetical protein | |
| Bamb_1209 | 3 | 23 | -3.779826 | hypothetical protein | |
| Bamb_1210 | 5 | 22 | -3.509728 | hypothetical protein | |
| Bamb_1211 | 4 | 20 | -3.719711 | hypothetical protein | |
| Bamb_1212 | 3 | 19 | -2.514018 | hypothetical protein | |
| Bamb_1213 | 1 | 20 | -2.923159 | hypothetical protein | |
| Bamb_1214 | 0 | 22 | -3.875133 | cyclic nucleotide-binding protein | |
| Bamb_1215 | 0 | 24 | -3.324730 | ECF subfamily RNA polymerase sigma-24 factor | |
| Bamb_1216 | 2 | 25 | -2.954879 | hypothetical protein | |
| Bamb_1217 | 2 | 24 | -2.971450 | hypothetical protein | |
| Bamb_1218 | 3 | 27 | -3.841961 | hypothetical protein | |
| Bamb_1219 | 2 | 27 | -3.615764 | hypothetical protein | |
| Bamb_1220 | 2 | 26 | -3.079512 | hypothetical protein | |
| Bamb_1221 | 1 | 23 | -3.177917 | altronate dehydratase | |
| Bamb_1222 | 2 | 22 | -3.150213 | mannitol dehydrogenase domain-containing | |
| Bamb_1223 | 1 | 22 | -3.347448 | alcohol dehydrogenase | |
| Bamb_1224 | 1 | 23 | -2.824192 | amidohydrolase 2 | |
| Bamb_1225 | 2 | 26 | -2.821188 | aldo/keto reductase | |
| Bamb_1226 | 3 | 25 | -2.807159 | periplasmic binding protein/LacI transcriptional |
| 15 | Bamb_1248 | Bamb_1267 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1248 | 2 | 11 | 1.329945 | hypothetical protein | |
| Bamb_1249 | 1 | 12 | 2.308465 | hypothetical protein | |
| Bamb_1250 | 1 | 13 | 3.055525 | phosphatidate cytidylyltransferase | |
| Bamb_1251 | 1 | 12 | 3.869981 | phospholipid/glycerol acyltransferase | |
| Bamb_1252 | 0 | 13 | 3.757073 | CDP-alcohol phosphatidyltransferase | |
| Bamb_1253 | -1 | 12 | 4.229588 | alpha/beta fold family hydrolase | |
| Bamb_1254 | -1 | 11 | 5.075503 | dual specificity protein phosphatase | |
| Bamb_1255 | 0 | 10 | 5.795773 | hypothetical protein | |
| Bamb_1256 | 0 | 9 | 5.817923 | diguanylate cyclase | |
| Bamb_1257 | 0 | 8 | 5.984612 | hypothetical protein | |
| Bamb_1258 | 0 | 10 | 5.673915 | cellulose synthase regulator protein | |
| Bamb_1259 | 1 | 10 | 5.201705 | endo-1,4-D-glucanase | |
| Bamb_1260 | 1 | 10 | 4.902859 | cellulose synthase domain-containing protein | |
| Bamb_1261 | -1 | 11 | 3.745238 | hypothetical protein | |
| Bamb_1262 | -1 | 14 | 2.679629 | chromosome partitioning ATPase | |
| Bamb_1263 | 0 | 15 | 2.434689 | cellulose synthase | |
| Bamb_1264 | 2 | 14 | 2.299018 | hypothetical protein | |
| Bamb_1265 | 1 | 13 | 1.792145 | hypothetical protein | |
| Bamb_1266 | 1 | 12 | 1.573720 | pirin domain-containing protein | |
| Bamb_1267 | 2 | 11 | 1.129511 | OsmC family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1253 | PERTACTIN | 30 | 0.041 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1255 | RTXTOXINA | 27 | 0.031 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1258 | FLGHOOKFLIK | 32 | 0.008 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1261 | TYPE3OMOPROT | 32 | 0.006 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| 16 | Bamb_1284 | Bamb_1310 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1284 | 2 | 8 | 0.241729 | hypothetical protein | |
| Bamb_1285 | 1 | 8 | 0.324186 | L-carnitine dehydratase/bile acid-inducible | |
| Bamb_1286 | 2 | 8 | 1.080235 | alanyl-tRNA synthetase | |
| Bamb_1287 | 2 | 10 | 1.747634 | hypothetical protein | |
| Bamb_1288 | 1 | 9 | 2.207376 | polypeptide-transport-associated | |
| Bamb_1289 | 1 | 11 | 3.078724 | filamentous hemagglutinin outer membrane | |
| Bamb_1290 | 2 | 9 | 5.530254 | LysR family transcriptional regulator | |
| Bamb_1291 | 2 | 10 | 5.693800 | hypothetical protein | |
| Bamb_1292 | 1 | 10 | 5.494666 | NUDIX hydrolase | |
| Bamb_1293 | 2 | 11 | 5.074697 | thioesterase superfamily protein | |
| Bamb_1294 | 2 | 10 | 5.386561 | inner-membrane translocator | |
| Bamb_1295 | 2 | 10 | 4.622901 | inner-membrane translocator | |
| Bamb_1296 | -1 | 11 | 2.588768 | ABC transporter-like protein | |
| Bamb_1297 | -2 | 9 | 2.583283 | ABC transporter-like protein | |
| Bamb_1298 | -1 | 9 | 2.259561 | short-chain dehydrogenase/reductase SDR | |
| Bamb_1299 | 0 | 11 | 1.922219 | hypothetical protein | |
| Bamb_1300 | 0 | 13 | 1.346494 | myo-inositol catabolism IolB domain-containing | |
| Bamb_1301 | 0 | 13 | 1.196968 | xylose isomerase domain-containing protein | |
| Bamb_1302 | 1 | 14 | 1.381459 | thiamine pyrophosphate binding domain-containing | |
| Bamb_1303 | 2 | 14 | 0.706245 | ribokinase-like domain-containing protein | |
| Bamb_1304 | 3 | 15 | 0.039723 | periplasmic binding protein/LacI transcriptional | |
| Bamb_1305 | 3 | 13 | 0.326830 | ABC transporter-like protein | |
| Bamb_1306 | 3 | 13 | 0.523823 | inner-membrane translocator | |
| Bamb_1307 | 2 | 13 | 1.044414 | xylose isomerase domain-containing protein | |
| Bamb_1308 | 2 | 13 | 1.611559 | inositol 2-dehydrogenase | |
| Bamb_1309 | 2 | 13 | 1.415277 | xylose isomerase domain-containing protein | |
| Bamb_1310 | 2 | 13 | 1.645915 | oxidoreductase domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1288 | PF00577 | 30 | 0.033 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1289 | PF05860 | 76 | 9e-19 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1298 | DHBDHDRGNASE | 103 | 1e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1306 | SOPEPROTEIN | 31 | 0.004 | Salmonella type III secretion SopE effector protein ... | |
>SOPEPROTEIN#Salmonella type III secretion SopE effector protein | |||||
| 17 | Bamb_1350 | Bamb_1361 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1350 | 2 | 13 | 0.827942 | 3-oxoacid CoA-transferase subunit A | |
| Bamb_1351 | 3 | 14 | 1.559323 | 3-oxoacid CoA-transferase subunit B | |
| Bamb_1352 | 2 | 15 | 1.737685 | short chain dehydrogenase | |
| Bamb_1353 | -1 | 9 | 0.939460 | polysaccharide deacetylase | |
| Bamb_1354 | -3 | 8 | -0.803928 | hypothetical protein | |
| Bamb_1355 | -3 | 9 | -1.751844 | LysR family transcriptional regulator | |
| Bamb_1356 | -2 | 8 | -2.742369 | alpha/beta fold family hydrolase | |
| Bamb_1357 | -1 | 9 | -3.811435 | endoribonuclease L-PSP | |
| Bamb_1358 | -1 | 9 | -3.936386 | (p)ppGpp synthetase I SpoT/RelA | |
| Bamb_1359 | -1 | 12 | -4.439510 | *threonyl-tRNA synthetase | |
| Bamb_1360 | 1 | 13 | -4.037380 | translation initiation factor IF-3 | |
| Bamb_1361 | 0 | 14 | -3.336033 | 50S ribosomal protein L35 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1352 | DHBDHDRGNASE | 66 | 2e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 18 | Bamb_1388 | Bamb_1405 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1388 | 0 | 17 | -3.324332 | MarR family transcriptional regulator | |
| Bamb_1389 | 0 | 17 | -3.404348 | GTP-binding protein TypA | |
| Bamb_1390 | 0 | 17 | -3.625624 | 2-oxoglutarate dehydrogenase E1 component | |
| Bamb_1391 | -2 | 14 | -3.271244 | dihydrolipoamide succinyltransferase | |
| Bamb_1392 | 0 | 11 | -1.937107 | dihydrolipoamide dehydrogenase | |
| Bamb_1393 | 3 | 15 | 0.039803 | AFG1 family ATPase | |
| Bamb_1394 | 5 | 19 | 0.465172 | hypothetical protein | |
| Bamb_1395 | 4 | 21 | 0.092526 | hypothetical protein | |
| Bamb_1396 | 4 | 21 | -0.014524 | polypeptide-transport-associated | |
| Bamb_1397 | 5 | 27 | 1.680583 | hypothetical protein | |
| Bamb_1398 | 3 | 26 | -0.225020 | hypothetical protein | |
| Bamb_1399 | 2 | 28 | -1.991283 | Flp/Fap pilin component | |
| Bamb_1400 | 1 | 24 | -1.881645 | peptidase A24A, prepilin type IV | |
| Bamb_1401 | 0 | 20 | -1.137024 | TadE family protein | |
| Bamb_1402 | 1 | 20 | -1.051317 | CpaB family Flp pilus assembly protein | |
| Bamb_1403 | 1 | 19 | -1.489834 | type II and III secretion system protein | |
| Bamb_1404 | 2 | 20 | -1.267941 | response regulator receiver protein | |
| Bamb_1405 | 2 | 21 | -1.814949 | type II secretion system protein E |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1388 | FLGMOTORFLIM | 28 | 0.027 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1389 | TCRTETOQM | 169 | 3e-47 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1391 | RTXTOXIND | 32 | 0.005 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1392 | INTIMIN | 31 | 0.015 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1397 | RTXTOXINA | 29 | 0.048 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1398 | cloacin | 35 | 8e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1400 | PREPILNPTASE | 43 | 2e-07 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1403 | BCTERIALGSPD | 133 | 5e-36 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1404 | HTHFIS | 40 | 1e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1405 | cloacin | 30 | 0.031 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 19 | Bamb_1459 | Bamb_1471 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1459 | 2 | 12 | 0.592971 | *hypothetical protein | |
| Bamb_1460 | 1 | 10 | 1.385051 | small multidrug resistance protein | |
| Bamb_1461 | 1 | 10 | 1.188806 | 3-hydroxyisobutyryl-CoA hydrolase | |
| Bamb_1462 | -1 | 11 | 0.636999 | hypothetical protein | |
| Bamb_1463 | -1 | 12 | 0.710692 | alkanesulfonate monooxygenase | |
| Bamb_1464 | -2 | 13 | -0.587985 | binding-protein-dependent transport system inner | |
| Bamb_1465 | -2 | 19 | -2.818294 | ABC transporter-like protein | |
| Bamb_1466 | 1 | 25 | -6.654941 | molybdenum-pterin binding | |
| Bamb_1467 | 1 | 26 | -6.348858 | hypothetical protein | |
| Bamb_1468 | 0 | 26 | -5.856876 | hypothetical protein | |
| Bamb_1469 | 0 | 24 | -5.881619 | tRNA-dihydrouridine synthase A | |
| Bamb_1470 | 1 | 29 | -6.261590 | *acyltransferase 3 | |
| Bamb_1471 | 0 | 27 | -5.057418 | FkbM family methyltransferase |
| 20 | Bamb_1501 | Bamb_1510 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1501 | 2 | 11 | 0.115746 | transcriptional regulator CysB-like protein | |
| Bamb_1502 | 2 | 10 | 1.772167 | hypothetical protein | |
| Bamb_1503 | 2 | 8 | 2.481080 | periplasmic binding protein/LacI transcriptional | |
| Bamb_1504 | 2 | 10 | 2.381022 | ABC transporter-like protein | |
| Bamb_1505 | -1 | 10 | -0.331904 | inner-membrane translocator | |
| Bamb_1506 | -1 | 9 | -1.313808 | LacI family transcriptional regulator | |
| Bamb_1507 | -1 | 7 | -2.322312 | ribokinase | |
| Bamb_1508 | -1 | 10 | -3.449204 | methyl-accepting chemotaxis sensory transducer | |
| Bamb_1509 | -1 | 9 | -4.076362 | hypothetical protein | |
| Bamb_1510 | 0 | 9 | -3.616639 | serine protein kinase PrkA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1508 | PF03544 | 31 | 0.013 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 21 | Bamb_1522 | Bamb_1558 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1522 | 2 | 10 | -0.103630 | RND efflux system outer membrane lipoprotein | |
| Bamb_1523 | 2 | 11 | -1.518535 | fimbrial protein | |
| Bamb_1524 | 2 | 13 | -0.845205 | fimbrial biogenesis outer membrane usher | |
| Bamb_1525 | 1 | 15 | -1.077493 | pili assembly chaperone | |
| Bamb_1526 | 1 | 12 | 0.035191 | fimbrial protein | |
| Bamb_1527 | 3 | 13 | 2.435498 | hypothetical protein | |
| Bamb_1528 | 4 | 13 | 4.785740 | hypothetical protein | |
| Bamb_1529 | 4 | 14 | 4.933530 | extracytoplasmic-function sigma-70 factor | |
| Bamb_1530 | 4 | 13 | 4.848919 | MbtH domain-containing protein | |
| Bamb_1531 | 2 | 12 | 4.441787 | taurine catabolism dioxygenase TauD/TfdA | |
| Bamb_1532 | 3 | 9 | 5.087966 | ABC transporter-like protein | |
| Bamb_1533 | 3 | 9 | 5.193220 | iron-hydroxamate transporter permease subunit | |
| Bamb_1534 | 3 | 9 | 5.073546 | ferric iron reductase | |
| Bamb_1535 | 2 | 8 | 4.863478 | periplasmic binding protein | |
| Bamb_1536 | 2 | 8 | 4.372074 | cyclic peptide transporter | |
| Bamb_1537 | 2 | 8 | 4.430322 | amino acid adenylation domain-containing | |
| Bamb_1538 | 2 | 8 | 3.479302 | amino acid adenylation domain-containing | |
| Bamb_1539 | 2 | 11 | 1.836060 | hypothetical protein | |
| Bamb_1540 | 2 | 11 | 0.424873 | lysine/ornithine N-monooxygenase | |
| Bamb_1541 | 3 | 11 | -0.789308 | TonB-dependent siderophore receptor | |
| Bamb_1542 | -1 | 17 | -2.595792 | folate-dependent phosphoribosylglycinamide | |
| Bamb_1543 | -1 | 20 | -3.029386 | hypothetical protein | |
| Bamb_1544 | 0 | 21 | -2.423531 | SpoVT/AbrB domain-containing protein | |
| Bamb_1545 | -1 | 14 | -1.777841 | PilT domain-containing protein | |
| Bamb_1546 | -1 | 13 | -0.200380 | dehydratase | |
| Bamb_1547 | 0 | 11 | 0.537473 | IS605 family transposase OrfB | |
| Bamb_1548 | 0 | 10 | 2.746603 | hypothetical protein | |
| Bamb_1549 | 1 | 11 | 3.740180 | hypothetical protein | |
| Bamb_1550 | 2 | 12 | 3.755185 | amidohydrolase | |
| Bamb_1551 | 2 | 13 | 3.806912 | cobyrinic acid a,c-diamide synthase | |
| Bamb_1552 | -1 | 10 | 3.372122 | cob(I)yrinic acid a,c-diamide | |
| Bamb_1553 | 0 | 9 | 3.849395 | cobalamin biosynthesis protein CbiG | |
| Bamb_1554 | 0 | 8 | 3.776902 | uroporphyrin-III C-methyltransferase | |
| Bamb_1555 | -1 | 9 | 3.276714 | hypothetical protein | |
| Bamb_1556 | -1 | 10 | 3.049790 | cobalamin biosynthesis protein CobW | |
| Bamb_1557 | -2 | 9 | 3.300939 | cobaltochelatase subunit CobN | |
| Bamb_1558 | 1 | 14 | 3.112011 | magnesium chelatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1524 | PF00577 | 679 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1532 | PF05272 | 29 | 0.023 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1534 | 2FE2SRDCTASE | 78 | 3e-19 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1535 | FERRIBNDNGPP | 113 | 2e-31 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1541 | PF06776 | 30 | 0.020 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1550 | TYPE4SSCAGA | 32 | 0.005 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1558 | HTHFIS | 43 | 1e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 22 | Bamb_1568 | Bamb_1584 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1568 | 2 | 14 | 2.254170 | IclR family transcriptional regulator | |
| Bamb_1569 | 2 | 14 | 3.134168 | chitinase | |
| Bamb_1570 | 2 | 15 | 4.485163 | hypothetical protein | |
| Bamb_1571 | 2 | 12 | 4.945772 | precorrin-3B C(17)-methyltransferase | |
| Bamb_1572 | 1 | 12 | 5.186993 | precorrin-2 C(20)-methyltransferase | |
| Bamb_1573 | 2 | 13 | 5.313494 | precorrin-8X methylmutase | |
| Bamb_1574 | 3 | 12 | 5.234788 | precorrin-3B synthase | |
| Bamb_1575 | 4 | 14 | 4.659410 | precorrin-6y C5,15-methyltransferase subunit | |
| Bamb_1576 | 3 | 11 | 2.986503 | cobalt-precorrin-6A synthase | |
| Bamb_1577 | 0 | 11 | 2.121985 | cobalt-precorrin-6x reductase | |
| Bamb_1578 | 1 | 11 | 3.227255 | precorrin-4 C(11)-methyltransferase | |
| Bamb_1579 | 1 | 10 | 3.809780 | major facilitator superfamily transporter | |
| Bamb_1580 | -1 | 9 | 3.585255 | MarR family transcriptional regulator | |
| Bamb_1581 | 0 | 9 | 3.280303 | glutathione S-transferase domain-containing | |
| Bamb_1582 | 0 | 9 | 3.123235 | porin | |
| Bamb_1583 | 2 | 10 | 3.721595 | ATP-dependent transcription regulator LuxR | |
| Bamb_1584 | 2 | 11 | 2.664381 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1579 | TCRTETB | 32 | 0.005 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1581 | adhesinmafb | 29 | 0.016 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1582 | NEISSPPORIN | 66 | 3e-14 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| 23 | Bamb_1616 | Bamb_1625 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1616 | 0 | 24 | -3.997734 | hypothetical protein | |
| Bamb_1617 | -2 | 21 | -3.382968 | hypothetical protein | |
| Bamb_1618 | -1 | 20 | -2.502475 | hypothetical protein | |
| Bamb_1619 | 0 | 21 | -2.741327 | major facilitator superfamily transporter | |
| Bamb_1620 | 0 | 23 | -3.454750 | LysR family transcriptional regulator | |
| Bamb_1621 | 1 | 23 | -3.236489 | LuxR family transcriptional regulator | |
| Bamb_1622 | 1 | 22 | -2.260124 | hypothetical protein | |
| Bamb_1623 | 1 | 20 | -2.470724 | major facilitator superfamily transporter | |
| Bamb_1624 | 0 | 20 | -3.579543 | glyoxalase/bleomycin resistance | |
| Bamb_1625 | 0 | 20 | -3.743854 | O-methyltransferase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1623 | TCRTETB | 55 | 4e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 24 | Bamb_1666 | Bamb_1706 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1666 | 1 | 12 | 3.228397 | hypothetical protein | |
| Bamb_1667 | 0 | 13 | 2.894473 | hypothetical protein | |
| Bamb_1668 | 1 | 14 | 2.253569 | sigma-54 dependent trancsriptional regulator | |
| Bamb_1669 | 0 | 14 | 1.443547 | beta-lactamase domain-containing protein | |
| Bamb_1670 | -1 | 12 | 0.211461 | hypothetical protein | |
| Bamb_1671 | 1 | 14 | -1.566356 | hypothetical protein | |
| Bamb_1672 | 1 | 12 | -3.241791 | binding-protein-dependent transport system inner | |
| Bamb_1673 | 2 | 9 | -3.180658 | binding-protein-dependent transport system inner | |
| Bamb_1674 | 0 | 11 | -0.182115 | spermidine/putrescine ABC transporter ATPase | |
| Bamb_1675 | 0 | 12 | -0.333843 | extracellular solute-binding protein | |
| Bamb_1676 | -2 | 11 | 0.887318 | hypothetical protein | |
| Bamb_1677 | -1 | 9 | 0.888956 | hypothetical protein | |
| Bamb_1678 | -2 | 9 | 1.235214 | periplasmic chaperone protein | |
| Bamb_1679 | 0 | 8 | 2.084943 | fimbrial biogenesis outer membrane usher | |
| Bamb_1680 | -1 | 11 | 1.690747 | OmpW family protein | |
| Bamb_1681 | 2 | 10 | 3.270592 | 2-nitropropane dioxygenase | |
| Bamb_1682 | 3 | 10 | 3.296080 | betaine aldehyde dehydrogenase | |
| Bamb_1683 | 5 | 11 | 3.719870 | hypothetical protein | |
| Bamb_1684 | 5 | 11 | 3.943272 | major facilitator superfamily transporter | |
| Bamb_1685 | 4 | 11 | 3.926699 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | |
| Bamb_1686 | 2 | 11 | 3.025298 | amino acid adenylation domain-containing | |
| Bamb_1687 | 0 | 12 | 2.248596 | hypothetical protein | |
| Bamb_1688 | 0 | 11 | 2.463643 | isochorismatase | |
| Bamb_1689 | -1 | 10 | 2.997438 | 2,3-dihydroxybenzoate-AMP ligase | |
| Bamb_1690 | -2 | 10 | 2.755368 | isochorismate synthase | |
| Bamb_1691 | 0 | 11 | 2.548250 | TonB-dependent receptor, plug | |
| Bamb_1692 | 0 | 12 | 3.445814 | AraC family transcriptional regulator | |
| Bamb_1693 | 1 | 11 | 3.322534 | Fe3+-hydroxamate ABC transporter periplasmic | |
| Bamb_1694 | 2 | 11 | 2.892284 | esterase | |
| Bamb_1695 | 1 | 12 | 2.105973 | transport system permease | |
| Bamb_1696 | 1 | 12 | 2.329820 | ABC transporter-like protein | |
| Bamb_1697 | 2 | 13 | 1.362426 | polysaccharide deacetylase | |
| Bamb_1698 | 2 | 13 | 0.966890 | aminoglycoside phosphotransferase | |
| Bamb_1699 | 1 | 11 | 0.140592 | cephalosporin hydroxylase | |
| Bamb_1700 | 0 | 12 | 0.081634 | glycosyl transferase family protein | |
| Bamb_1701 | 1 | 16 | -2.083807 | asparagine synthase | |
| Bamb_1702 | 2 | 25 | -5.445978 | hypothetical protein | |
| Bamb_1703 | 1 | 18 | -5.883439 | aminoglycoside phosphotransferase | |
| Bamb_1704 | 2 | 18 | -6.550315 | hypothetical protein | |
| Bamb_1705 | 0 | 12 | -4.102725 | ABC transporter ATPase | |
| Bamb_1706 | -1 | 11 | -3.338518 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1668 | HTHFIS | 332 | e-112 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1679 | PF00577 | 494 | e-164 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1684 | TCRTETA | 70 | 2e-15 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1685 | DHBDHDRGNASE | 265 | 1e-91 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1688 | ISCHRISMTASE | 357 | e-126 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1696 | SSPANPROTEIN | 29 | 0.026 | Salmonella invasion protein InvJ signature. | |
>SSPANPROTEIN#Salmonella invasion protein InvJ signature. | |||||
| 25 | Bamb_1774 | Bamb_1784 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1774 | 1 | 11 | 3.317177 | lipoyl synthase | |
| Bamb_1775 | 0 | 10 | 2.732358 | branched-chain alpha-keto acid dehydrogenase E2 | |
| Bamb_1776 | 0 | 10 | 2.426618 | transketolase, central region | |
| Bamb_1777 | -2 | 8 | 2.894134 | pyruvate dehydrogenase | |
| Bamb_1778 | -2 | 9 | 3.164463 | ATP-NAD/AcoX kinase | |
| Bamb_1780 | 0 | 10 | 0.725141 | Fis family GAF modulated sigma54 specific | |
| Bamb_1781 | 3 | 10 | -0.710226 | carboxymuconolactone decarboxylase | |
| Bamb_1782 | 3 | 9 | -0.287765 | MerR family transcriptional regulator | |
| Bamb_1783 | 4 | 11 | -0.096867 | hypothetical protein | |
| Bamb_1784 | 2 | 11 | -0.376512 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1780 | HTHFIS | 314 | e-102 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 26 | Bamb_1835 | Bamb_1886 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1835 | 1 | 34 | -6.963720 | alpha/beta hydrolase domain-containing protein | |
| Bamb_1836 | 7 | 52 | -11.352130 | oxidoreductase dehydrogenase family protein | |
| Bamb_1837 | 8 | 59 | -12.615656 | hypothetical protein | |
| Bamb_1838 | 9 | 60 | -12.798287 | stress responsive alpha-beta barrel | |
| Bamb_1839 | 9 | 60 | -12.731934 | phage integrase family protein | |
| Bamb_1840 | 10 | 63 | -12.641559 | hypothetical protein | |
| Bamb_1841 | 9 | 56 | -11.184045 | hypothetical protein | |
| Bamb_1842 | 6 | 48 | -8.235265 | adenine-specific DNA methylase-like protein | |
| Bamb_1843 | 4 | 38 | -5.792689 | hypothetical protein | |
| Bamb_1844 | 5 | 43 | -7.549683 | hypothetical protein | |
| Bamb_1845 | 6 | 42 | -8.034362 | PAAR repeat-containing protein | |
| Bamb_1846 | 6 | 42 | -8.186969 | hypothetical protein | |
| Bamb_1847 | 6 | 41 | -7.497530 | hypothetical protein | |
| Bamb_1848 | 6 | 40 | -7.878155 | hypothetical protein | |
| Bamb_1849 | 2 | 35 | -6.262719 | hypothetical protein | |
| Bamb_1850 | -1 | 29 | -5.087475 | D12 class N6 adenine-specific DNA | |
| Bamb_1851 | -2 | 27 | -3.218340 | hypothetical protein | |
| Bamb_1852 | -1 | 24 | -2.406154 | glycoside hydrolase | |
| Bamb_1853 | -1 | 24 | -2.839995 | phage holin family 2 protein | |
| Bamb_1854 | -1 | 21 | -3.072159 | phage late control D family protein | |
| Bamb_1855 | -1 | 19 | -2.986113 | phage tail X family protein | |
| Bamb_1856 | -2 | 20 | -2.949955 | phage P2 GpU family protein | |
| Bamb_1857 | 0 | 24 | -3.589633 | pyocin R2_PP, tail length determination protein | |
| Bamb_1858 | 2 | 26 | -4.499044 | hypothetical protein | |
| Bamb_1859 | 1 | 27 | -4.073622 | phage major tail tube protein | |
| Bamb_1860 | 1 | 28 | -3.746298 | phage tail sheath protein | |
| Bamb_1861 | 2 | 32 | -3.899884 | bacteriophage-acquired protein | |
| Bamb_1862 | 2 | 36 | -5.683176 | phage tail collar domain-containing protein | |
| Bamb_1863 | 0 | 35 | -5.647494 | phage tail protein I | |
| Bamb_1864 | 0 | 34 | -5.465670 | baseplate J family protein | |
| Bamb_1865 | 1 | 35 | -5.883227 | GPW/gp25 family protein | |
| Bamb_1866 | 0 | 33 | -5.892668 | hypothetical protein | |
| Bamb_1867 | -1 | 27 | -4.824261 | hypothetical protein | |
| Bamb_1868 | 0 | 21 | -1.828192 | phage baseplate assembly protein V | |
| Bamb_1869 | 0 | 22 | -1.319250 | hypothetical protein | |
| Bamb_1870 | -1 | 20 | -0.747088 | hypothetical protein | |
| Bamb_1871 | 0 | 20 | -0.426743 | hypothetical protein | |
| Bamb_1872 | -1 | 19 | -1.492957 | hypothetical protein | |
| Bamb_1873 | 0 | 21 | -2.034768 | hypothetical protein | |
| Bamb_1874 | 0 | 24 | -2.479313 | peptidase S14, ClpP | |
| Bamb_1875 | 1 | 23 | -3.487409 | lambda family phage portal protein | |
| Bamb_1876 | 0 | 25 | -4.188482 | hypothetical protein | |
| Bamb_1877 | 1 | 26 | -4.523568 | phage terminase GpA | |
| Bamb_1878 | 0 | 29 | -4.993344 | hypothetical protein | |
| Bamb_1879 | 1 | 28 | -4.770295 | hypothetical protein | |
| Bamb_1880 | 2 | 27 | -4.740935 | virulence-associated E family protein | |
| Bamb_1881 | 6 | 51 | -9.542896 | hypothetical protein | |
| Bamb_1882 | 6 | 54 | -10.255815 | hypothetical protein | |
| Bamb_1883 | 7 | 55 | -10.899982 | XRE family transcriptional regulator | |
| Bamb_1884 | 7 | 53 | -10.568314 | hypothetical protein | |
| Bamb_1885 | 5 | 36 | -6.892790 | hypothetical protein | |
| Bamb_1886 | 3 | 32 | -6.480365 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1850 | AUTOINDCRSYN | 29 | 0.010 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1861 | CHANLCOLICIN | 30 | 0.006 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1874 | TONBPROTEIN | 33 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1875 | PHPHTRNFRASE | 29 | 0.038 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1877 | TONBPROTEIN | 29 | 0.049 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1880 | PF05272 | 563 | 0.0 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1881 | CHANLCOLICIN | 28 | 0.014 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 27 | Bamb_1899 | Bamb_1913 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1899 | -1 | 11 | 3.058645 | BolA family protein | |
| Bamb_1900 | -1 | 11 | 2.590433 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
| Bamb_1901 | 0 | 11 | 3.004812 | N-acetyltransferase GCN5 | |
| Bamb_1902 | -1 | 10 | 2.873144 | phosphoribosylformylglycinamidine synthase | |
| Bamb_1903 | -2 | 8 | 2.209671 | D-amino-acid dehydrogenase | |
| Bamb_1904 | 0 | 9 | 0.037046 | carbohydrate kinase | |
| Bamb_1905 | 2 | 9 | -2.275141 | glucose-6-phosphate isomerase | |
| Bamb_1906 | 2 | 8 | -2.902811 | ABC transporter-like protein | |
| Bamb_1907 | 4 | 10 | -3.508923 | arylesterase | |
| Bamb_1908 | 4 | 10 | -2.589263 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
| Bamb_1909 | 5 | 9 | -2.585551 | **ATP-dependent protease La | |
| Bamb_1910 | 2 | 7 | -0.891558 | ATP-dependent protease ATP-binding subunit ClpX | |
| Bamb_1911 | 0 | 8 | 0.882583 | ATP-dependent Clp protease proteolytic subunit | |
| Bamb_1912 | -2 | 8 | 1.526412 | trigger factor | |
| Bamb_1913 | -1 | 9 | 3.173396 | glycerate kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1900 | IGASERPTASE | 28 | 0.043 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1909 | GPOSANCHOR | 42 | 1e-05 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1910 | HTHFIS | 31 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 28 | Bamb_1954 | Bamb_2031 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1954 | 2 | 10 | 1.543809 | GntR family transcriptional regulator | |
| Bamb_1955 | 0 | 9 | 0.852641 | L,D-carboxypeptidase A | |
| Bamb_1956 | 0 | 11 | 0.759676 | CMP/dCMP deaminase | |
| Bamb_1957 | -1 | 11 | 1.234833 | hypothetical protein | |
| Bamb_1958 | 0 | 10 | 1.190330 | major facilitator superfamily transporter | |
| Bamb_1959 | -1 | 15 | -0.381758 | GntR family transcriptional regulator | |
| Bamb_1960 | 0 | 21 | -1.713981 | oxidoreductase | |
| Bamb_1961 | 4 | 35 | -4.184850 | 4Fe-4S ferredoxin | |
| Bamb_1962 | 6 | 38 | -5.202704 | HEAT repeat-containing PBS lyase | |
| Bamb_1963 | 10 | 44 | -8.180070 | hypothetical protein | |
| Bamb_1964 | 9 | 42 | -9.635047 | hypothetical protein | |
| Bamb_1965 | 9 | 38 | -8.883178 | exonuclease | |
| Bamb_1966 | 8 | 37 | -8.259572 | hypothetical protein | |
| Bamb_1967 | 8 | 35 | -7.914691 | ATPase central domain-containing protein | |
| Bamb_1968 | 8 | 33 | -7.112747 | hypothetical protein | |
| Bamb_1969 | 7 | 35 | -6.722426 | hypothetical protein | |
| Bamb_1970 | 8 | 36 | -6.034730 | hypothetical protein | |
| Bamb_1971 | 8 | 37 | -5.852087 | ATPase central domain-containing protein | |
| Bamb_1972 | 9 | 35 | -5.086423 | hypothetical protein | |
| Bamb_1973 | 9 | 36 | -5.166195 | hypothetical protein | |
| Bamb_1974 | 10 | 37 | -5.936367 | dihydrolipoamide dehydrogenase | |
| Bamb_1975 | 11 | 34 | -6.381778 | thioredoxin domain-containing protein | |
| Bamb_1976 | 12 | 33 | -6.381963 | thioredoxin | |
| Bamb_1977 | 11 | 33 | -6.209363 | NADH:flavin oxidoreductase | |
| Bamb_1978 | 11 | 33 | -5.129031 | OsmC family protein | |
| Bamb_1979 | 11 | 34 | -4.323791 | DSBA oxidoreductase | |
| Bamb_1980 | 10 | 30 | -2.932754 | TetR family transcriptional regulator | |
| Bamb_1981 | 9 | 28 | -1.058560 | alkylhydroperoxidase | |
| Bamb_1982 | 9 | 26 | -0.150249 | short-chain dehydrogenase/reductase SDR | |
| Bamb_1983 | 8 | 26 | 1.288964 | hypothetical protein | |
| Bamb_1984 | 7 | 29 | 0.948933 | hypothetical protein | |
| Bamb_1985 | 9 | 31 | -0.643907 | replication initiator and transcription | |
| Bamb_1986 | 10 | 34 | -1.573397 | cobyrinic acid a,c-diamide synthase | |
| Bamb_1987 | 10 | 35 | -2.497667 | hypothetical protein | |
| Bamb_1988 | 10 | 41 | -4.718770 | Type IV secretory pathway protease TraF-like | |
| Bamb_1989 | 11 | 40 | -4.665277 | hypothetical protein | |
| Bamb_1990 | 11 | 42 | -6.627350 | LysR family transcriptional regulator | |
| Bamb_1991 | 10 | 36 | -4.265656 | hypothetical protein | |
| Bamb_1992 | 9 | 35 | -3.763813 | hypothetical protein | |
| Bamb_1993 | 10 | 37 | -3.921453 | beta-lactamase domain-containing protein | |
| Bamb_1994 | 11 | 39 | -4.586559 | LysR family transcriptional regulator | |
| Bamb_1995 | 11 | 41 | -5.050089 | ThiJ/PfpI domain-containing protein | |
| Bamb_1996 | 12 | 43 | -5.728265 | major facilitator superfamily transporter | |
| Bamb_1997 | 10 | 40 | -5.877875 | hypothetical protein | |
| Bamb_1998 | 10 | 38 | -5.482393 | MarR family transcriptional regulator | |
| Bamb_1999 | 8 | 35 | -4.223825 | ABC transporter-like protein | |
| Bamb_2000 | 7 | 30 | -1.903678 | LysR family transcriptional regulator | |
| Bamb_2001 | 7 | 27 | -1.260372 | lipoprotein | |
| Bamb_2002 | 6 | 25 | -1.135590 | conjugal transfer coupling protein TraG | |
| Bamb_2003 | 7 | 26 | -1.012274 | CopG/DNA-binding domain-containing protein | |
| Bamb_2004 | 7 | 27 | -0.712943 | type II secretion system protein E | |
| Bamb_2005 | 9 | 26 | -1.022033 | conjugal transfer protein TrbC | |
| Bamb_2006 | 8 | 26 | -1.060173 | conjugal transfer trbD transmembrane protein | |
| Bamb_2007 | 7 | 25 | -1.136373 | conjugal transfer ATPase TrbE | |
| Bamb_2008 | 8 | 25 | -0.441323 | conjugal transfer protein TrbJ | |
| Bamb_2009 | 8 | 27 | -0.106166 | lipoprotein | |
| Bamb_2010 | 9 | 27 | -1.359109 | conjugal transfer protein TrbL | |
| Bamb_2011 | 9 | 26 | -2.187622 | conjugal transfer protein TrbF | |
| Bamb_2012 | 10 | 26 | -2.620325 | conjugal transfer protein TrbG/VirB9/CagX | |
| Bamb_2013 | 10 | 30 | -3.675643 | conjugation TrbI family protein | |
| Bamb_2014 | 11 | 35 | -5.954074 | hypothetical protein | |
| Bamb_2015 | 11 | 36 | -6.423554 | hypothetical protein | |
| Bamb_2016 | 9 | 32 | -5.431322 | transposase, IS4 family protein | |
| Bamb_2017 | 4 | 20 | -4.415434 | hypothetical protein | |
| Bamb_2018 | 2 | 18 | -2.868622 | phage transcriptional regulator AlpA | |
| Bamb_2019 | 2 | 13 | -1.956759 | prophage CP4-57 regulatory | |
| Bamb_2020 | 1 | 12 | -0.391694 | hypothetical protein | |
| Bamb_2021 | 1 | 11 | 0.145558 | phage integrase family protein | |
| Bamb_2022 | -2 | 10 | 2.585634 | GMP synthase | |
| Bamb_2023 | -1 | 11 | 3.802804 | hypothetical protein | |
| Bamb_2024 | 0 | 11 | 3.565122 | inosine 5'-monophosphate dehydrogenase | |
| Bamb_2025 | 1 | 11 | 4.787133 | hypothetical protein | |
| Bamb_2026 | -1 | 12 | 3.116232 | hypothetical protein | |
| Bamb_2027 | -2 | 11 | 2.514656 | hypothetical protein | |
| Bamb_2028 | -2 | 11 | -0.631455 | hypothetical protein | |
| Bamb_2029 | 0 | 11 | -1.267912 | hypothetical protein | |
| Bamb_2030 | 0 | 9 | -3.259188 | hypothetical protein | |
| Bamb_2031 | 1 | 10 | -3.713285 | cyclase/dehydrase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1954 | CARBMTKINASE | 27 | 0.041 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1958 | TCRTETB | 39 | 4e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1970 | SUBTILISIN | 56 | 2e-10 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1980 | HTHTETR | 70 | 4e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1982 | DHBDHDRGNASE | 124 | 1e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1996 | TCRTETB | 46 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2010 | PRTACTNFAMLY | 31 | 0.012 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2011 | PF04335 | 59 | 6e-13 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2012 | PF03544 | 29 | 0.025 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 29 | Bamb_2095 | Bamb_2104 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2095 | 2 | 9 | 3.069613 | hypothetical protein | |
| Bamb_2096 | 4 | 8 | 2.960237 | acriflavin resistance protein | |
| Bamb_2097 | 4 | 10 | 3.002161 | RND family efflux transporter MFP subunit | |
| Bamb_2098 | 3 | 11 | 2.444523 | RND efflux system outer membrane lipoprotein | |
| Bamb_2099 | 4 | 10 | 0.921464 | hypothetical protein | |
| Bamb_2100 | 3 | 10 | 0.492743 | two component transcriptional regulator | |
| Bamb_2101 | 4 | 12 | -1.672933 | sensor signal transduction histidine kinase | |
| Bamb_2102 | 1 | 12 | -3.198446 | two component transcriptional regulator | |
| Bamb_2103 | 1 | 12 | -3.117351 | hypothetical protein | |
| Bamb_2104 | 0 | 12 | -3.402207 | cytochrome C oxidase subunit IV |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2095 | TONBPROTEIN | 28 | 0.006 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2096 | ACRIFLAVINRP | 624 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2097 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2102 | HTHFIS | 78 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 30 | Bamb_2201 | Bamb_2226 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2201 | 3 | 12 | 1.525804 | glutamate--ammonia ligase | |
| Bamb_2202 | 3 | 10 | 2.858242 | peptidase C26 | |
| Bamb_2203 | 2 | 10 | 2.684352 | hypothetical protein | |
| Bamb_2204 | -1 | 9 | 1.717843 | hypothetical protein | |
| Bamb_2205 | -2 | 8 | 1.402644 | N-formylglutamate amidohydrolase | |
| Bamb_2206 | -3 | 10 | 1.600682 | N-formimino-L-glutamate deiminase | |
| Bamb_2207 | -2 | 10 | 0.741380 | imidazolonepropionase | |
| Bamb_2208 | -2 | 10 | 1.015515 | hypothetical protein | |
| Bamb_2209 | -3 | 9 | 1.230894 | urocanate hydratase | |
| Bamb_2210 | -2 | 8 | 2.418712 | histidine utilization repressor | |
| Bamb_2211 | -1 | 9 | 3.120535 | histidine ammonia-lyase | |
| Bamb_2212 | 1 | 9 | 3.803149 | extracellular solute-binding protein | |
| Bamb_2213 | 3 | 11 | 4.451399 | 4'-phosphopantetheinyl transferase | |
| Bamb_2214 | 3 | 12 | 3.721613 | alpha/beta hydrolase | |
| Bamb_2215 | 0 | 10 | 2.752926 | LysR family transcriptional regulator | |
| Bamb_2216 | 1 | 9 | 2.859783 | major facilitator superfamily transporter | |
| Bamb_2217 | 0 | 10 | 2.416705 | deoxyribodipyrimidine photo-lyase | |
| Bamb_2218 | 0 | 9 | 0.713830 | phosphoesterase, DHHA1 | |
| Bamb_2219 | -1 | 9 | 0.443973 | short chain dehydrogenase | |
| Bamb_2220 | -3 | 11 | -1.614582 | major facilitator superfamily transporter | |
| Bamb_2221 | 2 | 25 | -5.221648 | 3-carboxymuconate cyclase-like protein | |
| Bamb_2222 | 3 | 28 | -6.556967 | AraC family transcriptional regulator | |
| Bamb_2223 | 3 | 27 | -6.164976 | hypothetical protein | |
| Bamb_2224 | 4 | 29 | -6.213810 | HAD family hydrolase | |
| Bamb_2225 | 2 | 23 | -5.534196 | *Rhs element Vgr protein | |
| Bamb_2226 | 2 | 19 | -4.576919 | EF hand domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2216 | TCRTETA | 42 | 4e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2219 | DHBDHDRGNASE | 76 | 2e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2226 | TONBPROTEIN | 33 | 0.005 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 31 | Bamb_2270 | Bamb_2284 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2270 | -2 | 10 | -3.332301 | acyl-CoA dehydrogenase domain-containing | |
| Bamb_2271 | 0 | 14 | -4.268119 | hypothetical protein | |
| Bamb_2272 | 0 | 14 | -4.752576 | NUDIX hydrolase | |
| Bamb_2273 | 1 | 16 | -4.842284 | hypothetical protein | |
| Bamb_2274 | 0 | 16 | -4.876628 | NADH dehydrogenase subunit N | |
| Bamb_2275 | 0 | 16 | -5.112741 | NADH dehydrogenase subunit M | |
| Bamb_2276 | 0 | 17 | -3.484961 | NADH dehydrogenase subunit L | |
| Bamb_2277 | -1 | 18 | -2.966046 | NADH dehydrogenase subunit K | |
| Bamb_2278 | 0 | 18 | -2.872642 | NADH dehydrogenase subunit J | |
| Bamb_2279 | -1 | 17 | -3.080705 | NADH dehydrogenase subunit I | |
| Bamb_2280 | -1 | 17 | -2.944420 | NADH dehydrogenase subunit H | |
| Bamb_2281 | -1 | 15 | -2.831072 | NADH dehydrogenase subunit G | |
| Bamb_2282 | -1 | 12 | -4.727893 | NADH-quinone oxidoreductase subunit F | |
| Bamb_2283 | -1 | 15 | -4.776952 | NADH dehydrogenase subunit E | |
| Bamb_2284 | 0 | 15 | -3.190770 | NADH dehydrogenase subunit D |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2280 | OUTRMMBRANEA | 31 | 0.009 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| 32 | Bamb_2313 | Bamb_2319 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2313 | 0 | 7 | 4.184551 | glucose-1-dehydrogenase | |
| Bamb_2314 | -1 | 8 | 4.028231 | glycosyltransferase | |
| Bamb_2315 | -1 | 12 | 3.857042 | hypothetical protein | |
| Bamb_2316 | -1 | 11 | 4.070129 | threonyl/alanyl tRNA synthetase | |
| Bamb_2317 | -1 | 12 | 3.738688 | globin | |
| Bamb_2318 | 0 | 10 | 3.929976 | hypothetical protein | |
| Bamb_2319 | 0 | 11 | 3.012190 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2313 | DHBDHDRGNASE | 94 | 4e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2318 | ISCHRISMTASE | 31 | 0.015 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 33 | Bamb_2392 | Bamb_2434 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2392 | 2 | 13 | 0.143876 | transmembrane pair domain-containing protein | |
| Bamb_2393 | 2 | 12 | -0.030602 | LysR family transcriptional regulator | |
| Bamb_2394 | 3 | 12 | -0.816453 | hypothetical protein | |
| Bamb_2395 | 2 | 8 | -1.786354 | DNA topoisomerase IV subunit A | |
| Bamb_2396 | 1 | 12 | -3.396911 | DNA topoisomerase IV subunit B | |
| Bamb_2397 | 1 | 20 | -4.772943 | ABC transporter-like protein | |
| Bamb_2398 | 5 | 37 | -7.356473 | hypothetical protein | |
| Bamb_2399 | 4 | 40 | -7.871761 | rubredoxin-type Fe(Cys)4 protein | |
| Bamb_2400 | 4 | 42 | -8.294594 | *phage integrase family protein | |
| Bamb_2401 | 5 | 41 | -7.187118 | helix-turn-helix, Fis-type | |
| Bamb_2402 | 3 | 40 | -6.420967 | prophage CP4-57 regulatory | |
| Bamb_2403 | 3 | 39 | -6.238026 | hypothetical protein | |
| Bamb_2404 | 4 | 40 | -7.005525 | hypothetical protein | |
| Bamb_2405 | 4 | 40 | -7.280536 | hypothetical protein | |
| Bamb_2406 | 4 | 38 | -7.001640 | TOPRIM domain-containing protein | |
| Bamb_2407 | 4 | 38 | -7.717755 | hypothetical protein | |
| Bamb_2408 | 4 | 39 | -6.989775 | hypothetical protein | |
| Bamb_2409 | 4 | 38 | -6.379893 | hypothetical protein | |
| Bamb_2410 | 4 | 36 | -5.961476 | hypothetical protein | |
| Bamb_2411 | 4 | 36 | -5.784551 | hypothetical protein | |
| Bamb_2412 | 5 | 36 | -5.676601 | hypothetical protein | |
| Bamb_2413 | 6 | 41 | -6.608323 | hypothetical protein | |
| Bamb_2414 | 7 | 42 | -8.733484 | phage integrase family protein | |
| Bamb_2415 | 8 | 46 | -10.839718 | hypothetical protein | |
| Bamb_2416 | 6 | 42 | -9.554353 | *hypothetical protein | |
| Bamb_2417 | 7 | 45 | -10.228025 | hypothetical protein | |
| Bamb_2418 | 7 | 45 | -9.593921 | CheA signal transduction histidine kinase | |
| Bamb_2419 | 6 | 43 | -8.698013 | hypothetical protein | |
| Bamb_2420 | 6 | 45 | -8.258895 | hypothetical protein | |
| Bamb_2421 | 6 | 47 | -9.586204 | phage integrase family protein | |
| Bamb_2422 | 7 | 58 | -11.276200 | hypothetical protein | |
| Bamb_2423 | 8 | 61 | -11.875783 | hypothetical protein | |
| Bamb_2424 | 5 | 53 | -10.196390 | hypothetical protein | |
| Bamb_2425 | 4 | 48 | -8.484546 | hypothetical protein | |
| Bamb_2426 | 3 | 41 | -7.009115 | hypothetical protein | |
| Bamb_2427 | 3 | 33 | -4.208692 | resolvase domain-containing protein | |
| Bamb_2428 | 4 | 26 | -2.661159 | hypothetical protein | |
| Bamb_2429 | 6 | 17 | 1.008077 | *parallel beta-helix repeat-containing protein | |
| Bamb_2430 | 5 | 14 | 2.175927 | short-chain dehydrogenase/reductase SDR | |
| Bamb_2431 | 4 | 10 | 2.215466 | TetR family transcriptional regulator | |
| Bamb_2432 | 5 | 11 | 2.413640 | ecotin | |
| Bamb_2433 | 3 | 11 | 1.638203 | hypothetical protein | |
| Bamb_2434 | 2 | 11 | 1.434442 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2401 | HTHFIS | 38 | 2e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2430 | DHBDHDRGNASE | 124 | 6e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2431 | HTHTETR | 54 | 3e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2433 | cloacin | 33 | 2e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 34 | Bamb_2487 | Bamb_2502 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2487 | 2 | 15 | -0.016189 | hypothetical protein | |
| Bamb_2488 | 0 | 11 | -0.031070 | chromosome segregation and condensation protein | |
| Bamb_2489 | -2 | 11 | 1.822172 | pantoate--beta-alanine ligase | |
| Bamb_2490 | -1 | 10 | 2.544025 | aspartate alpha-decarboxylase | |
| Bamb_2491 | -1 | 9 | 4.312261 | cobyrinic acid a,c-diamide synthase | |
| Bamb_2492 | 1 | 9 | 4.688100 | DoxX family protein | |
| Bamb_2493 | 1 | 10 | 4.948554 | hypothetical protein | |
| Bamb_2494 | 2 | 10 | 5.437005 | cobyric acid synthase | |
| Bamb_2495 | 3 | 14 | 5.437342 | adenosylcobinamide kinase | |
| Bamb_2496 | 3 | 11 | 5.189765 | cobalamin biosynthesis protein | |
| Bamb_2497 | 3 | 10 | 4.817274 | threonine-phosphate decarboxylase | |
| Bamb_2498 | 4 | 11 | 5.185716 | periplasmic binding protein | |
| Bamb_2499 | 4 | 12 | 5.226017 | phosphoglycerate mutase | |
| Bamb_2500 | 2 | 12 | 4.545629 | cobalamin synthase | |
| Bamb_2501 | 1 | 12 | 3.988396 | nicotinate-nucleotide--dimethylbenzimidazole | |
| Bamb_2502 | 1 | 15 | 3.017276 | ABC transporter-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2487 | SYCECHAPRONE | 25 | 0.011 | Gram-negative bacterial type III secretion SycE cha... | |
>SYCECHAPRONE#Gram-negative bacterial type III secretion SycE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2498 | FERRIBNDNGPP | 42 | 1e-06 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2502 | PF05272 | 30 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 35 | Bamb_2572 | Bamb_2592 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2572 | 2 | 14 | 0.170737 | isocitrate dehydrogenase | |
| Bamb_2573 | 3 | 15 | 1.249061 | pseudouridine synthase, Rsu | |
| Bamb_2575 | 1 | 14 | 0.797300 | hypothetical protein | |
| Bamb_2576 | 1 | 12 | 1.684600 | elongation factor G | |
| Bamb_2577 | 4 | 15 | 4.194708 | high-affinity nickel-transporter | |
| Bamb_2578 | 4 | 16 | 4.906894 | hypothetical protein | |
| Bamb_2579 | 1 | 9 | 3.232539 | aldo/keto reductase | |
| Bamb_2580 | 1 | 10 | 3.475875 | GntR family transcriptional regulator | |
| Bamb_2581 | 1 | 10 | 4.013355 | L-carnitine dehydratase/bile acid-inducible | |
| Bamb_2582 | 0 | 9 | 4.065873 | citrate synthase | |
| Bamb_2583 | 0 | 10 | 3.009362 | hypothetical protein | |
| Bamb_2584 | 0 | 11 | 2.875057 | EmrB/QacA family drug resistance transporter | |
| Bamb_2585 | 0 | 11 | 4.048515 | diguanylate phosphodiesterase | |
| Bamb_2586 | 0 | 10 | 2.991410 | type 11 methyltransferase | |
| Bamb_2587 | -1 | 10 | 3.461008 | 2-dehydropantoate 2-reductase | |
| Bamb_2588 | 0 | 8 | 3.536391 | hypothetical protein | |
| Bamb_2589 | 0 | 7 | 3.534181 | Crp/FNR family transcriptional regulator | |
| Bamb_2590 | 0 | 7 | 3.180302 | chromate transporter | |
| Bamb_2591 | 2 | 10 | 1.941874 | superoxide dismutase | |
| Bamb_2592 | -1 | 11 | 3.185847 | exodeoxyribonuclease VII large subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2576 | TCRTETOQM | 625 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2578 | cloacin | 48 | 7e-08 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2581 | PF06872 | 32 | 0.007 | EspG protein | |
>PF06872#EspG protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2584 | TCRTETB | 140 | 7e-39 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2589 | LCRVANTIGEN | 28 | 0.020 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| 36 | Bamb_2622 | Bamb_2647 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2622 | 3 | 15 | 1.469828 | hypothetical protein | |
| Bamb_2623 | 3 | 13 | 1.726415 | flavin reductase domain-containing protein | |
| Bamb_2624 | 4 | 11 | 2.325792 | AsnC family transcriptional regulator | |
| Bamb_2625 | 4 | 11 | 3.296324 | cyclase family protein | |
| Bamb_2626 | 3 | 11 | 3.658645 | kynureninase | |
| Bamb_2627 | 3 | 11 | 3.821206 | tryptophan 2,3-dioxygenase | |
| Bamb_2628 | 3 | 9 | 4.470440 | major facilitator superfamily transporter | |
| Bamb_2629 | 2 | 9 | 4.695762 | 2-dehydropantoate 2-reductase | |
| Bamb_2630 | 1 | 10 | 4.501898 | aldehyde dehydrogenase | |
| Bamb_2631 | 1 | 11 | 4.774955 | benzoylformate decarboxylase | |
| Bamb_2632 | 2 | 11 | 4.828359 | LysR family transcriptional regulator | |
| Bamb_2633 | 2 | 11 | 4.578981 | mannitol dehydrogenase domain-containing | |
| Bamb_2634 | 1 | 10 | 3.933395 | xylulokinase | |
| Bamb_2635 | 2 | 12 | 4.035253 | DeoR family transcriptional regulator | |
| Bamb_2636 | 1 | 13 | 3.471343 | major facilitator superfamily transporter | |
| Bamb_2637 | 0 | 13 | 2.102385 | beta-lactamase | |
| Bamb_2638 | -2 | 15 | 0.770246 | LysR family transcriptional regulator | |
| Bamb_2639 | -1 | 15 | 1.635799 | ABC transporter-like protein | |
| Bamb_2640 | 0 | 13 | 2.425499 | HAD family hydrolase | |
| Bamb_2641 | 0 | 13 | 1.846500 | binding-protein-dependent transport system inner | |
| Bamb_2642 | 1 | 13 | 2.399992 | binding-protein-dependent transport system inner | |
| Bamb_2643 | -1 | 14 | 2.676807 | extracellular solute-binding protein | |
| Bamb_2644 | 2 | 14 | 3.423965 | tagatose-6-phosphate kinase | |
| Bamb_2645 | 0 | 13 | 2.761235 | ribokinase-like domain-containing protein | |
| Bamb_2646 | -1 | 11 | 2.054395 | sorbitol dehydrogenase | |
| Bamb_2647 | -2 | 9 | 3.570669 | ferric uptake regulator family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2628 | TCRTETA | 43 | 2e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2636 | TCRTETB | 38 | 7e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2637 | BLACTAMASEA | 29 | 0.022 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2639 | PF05272 | 30 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2641 | RTXTOXIND | 28 | 0.044 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2643 | MALTOSEBP | 34 | 0.001 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2646 | DHBDHDRGNASE | 130 | 8e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 37 | Bamb_2730 | Bamb_2735 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2730 | 2 | 13 | 1.834368 | glycerol-3-phosphate dehydrogenase | |
| Bamb_2731 | 3 | 12 | 2.298054 | glycerol kinase | |
| Bamb_2732 | 4 | 11 | 2.988101 | MIP family channel protein | |
| Bamb_2733 | 3 | 10 | 2.964527 | FAD-dependent pyridine nucleotide-disulfide | |
| Bamb_2734 | 3 | 11 | 1.743482 | Rieske (2Fe-2S) domain-containing protein | |
| Bamb_2735 | 2 | 11 | 2.034221 | fatty acid desaturase |
| 38 | Bamb_2807 | Bamb_2829 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2807 | 3 | 10 | 1.849858 | peptidase M48, Ste24p | |
| Bamb_2808 | 4 | 8 | 3.639596 | glycosyl transferase family protein | |
| Bamb_2809 | 4 | 9 | 3.597115 | endoribonuclease L-PSP | |
| Bamb_2810 | 2 | 10 | 3.271904 | short chain dehydrogenase | |
| Bamb_2811 | 2 | 10 | 4.414015 | acyl carrier protein | |
| Bamb_2812 | 2 | 10 | 5.026977 | hypothetical protein | |
| Bamb_2813 | 1 | 11 | 4.832434 | acyl-coenzyme A synthetase/AMP-(fatty) acid | |
| Bamb_2814 | 1 | 11 | 4.943628 | acyltransferase-like protein | |
| Bamb_2815 | 2 | 12 | 5.069002 | hypothetical protein | |
| Bamb_2816 | 1 | 11 | 4.872880 | exporter-like protein | |
| Bamb_2817 | 2 | 13 | 4.110523 | polysaccharide deacetylase | |
| Bamb_2818 | 1 | 13 | 1.996836 | 3-oxoacyl-ACP synthase | |
| Bamb_2819 | 1 | 13 | 1.569900 | hypothetical protein | |
| Bamb_2820 | 1 | 13 | 0.614200 | 3-hydroxylacyl-(acyl carrier protein) | |
| Bamb_2821 | -1 | 12 | -0.535243 | hypothetical protein | |
| Bamb_2822 | -1 | 14 | -0.323831 | hypothetical protein | |
| Bamb_2823 | -1 | 14 | -1.082877 | acetoacetyl-CoA reductase | |
| Bamb_2824 | 0 | 14 | -0.384040 | acetyl-CoA acetyltransferase | |
| Bamb_2825 | 2 | 15 | -1.004054 | phasin family protein | |
| Bamb_2826 | 3 | 11 | -0.582071 | cobyrinic acid a,c-diamide synthase | |
| Bamb_2827 | 4 | 14 | -0.677612 | hypothetical protein | |
| Bamb_2828 | 4 | 15 | -0.879480 | hypothetical protein | |
| Bamb_2829 | 2 | 15 | -0.857266 | pili assembly chaperone |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2810 | DHBDHDRGNASE | 103 | 6e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2823 | DHBDHDRGNASE | 126 | 1e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2824 | ACRIFLAVINRP | 30 | 0.018 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 39 | Bamb_2840 | Bamb_2862 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2840 | 5 | 13 | 0.223812 | transporter | |
| Bamb_2841 | 3 | 12 | 1.152603 | formyltetrahydrofolate deformylase | |
| Bamb_2842 | 3 | 11 | 1.901757 | NUDIX hydrolase | |
| Bamb_2843 | 2 | 11 | 1.236578 | lysine exporter protein LysE/YggA | |
| Bamb_2844 | 1 | 10 | 1.161639 | adenine phosphoribosyltransferase | |
| Bamb_2845 | 1 | 10 | 0.784368 | sodium/hydrogen exchanger | |
| Bamb_2846 | -2 | 12 | -0.395995 | KpsF/GutQ family protein | |
| Bamb_2847 | -1 | 14 | -1.954966 | 3-deoxy-D-manno-octulosonate 8-phosphate | |
| Bamb_2848 | 0 | 15 | -2.939846 | hypothetical protein | |
| Bamb_2849 | 1 | 14 | -2.678059 | OstA family protein | |
| Bamb_2850 | 1 | 13 | -3.128145 | ABC transporter-like protein | |
| Bamb_2851 | 1 | 14 | -3.113950 | RNA polymerase factor sigma-54 | |
| Bamb_2852 | -2 | 11 | -1.470927 | sigma 54 modulation protein/ribosomal protein | |
| Bamb_2853 | -2 | 10 | -0.095277 | PTS IIA-like nitrogen-regulatory protein PtsN | |
| Bamb_2854 | -1 | 8 | 0.759609 | HPr kinase/phosphorylase | |
| Bamb_2855 | 0 | 8 | 1.234441 | hypothetical protein | |
| Bamb_2856 | 3 | 10 | 0.560903 | peptidase S16, lon domain-containing protein | |
| Bamb_2857 | 1 | 10 | -0.053544 | A/G-specific adenine glycosylase | |
| Bamb_2858 | 2 | 12 | -1.397581 | formamidopyrimidine-DNA glycosylase | |
| Bamb_2859 | 2 | 13 | -1.753120 | hypothetical protein | |
| Bamb_2860 | 1 | 14 | -2.707925 | outer membrane lipoprotein LolB | |
| Bamb_2861 | 0 | 17 | -3.774043 | 4-diphosphocytidyl-2-C-methyl-D-erythritol | |
| Bamb_2862 | -1 | 14 | -3.411031 | *ribose-phosphate pyrophosphokinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2843 | BCTERIALGSPF | 29 | 0.015 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2859 | SYCDCHAPRONE | 32 | 0.004 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 40 | Bamb_2913 | Bamb_2931 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2913 | 2 | 13 | -0.131300 | carboxyl-terminal protease | |
| Bamb_2914 | 2 | 11 | -0.119383 | UBA/THIF-type NAD/FAD binding protein | |
| Bamb_2915 | 0 | 10 | -0.070918 | phosphoenolpyruvate-protein phosphotransferase | |
| Bamb_2916 | -1 | 9 | -0.250001 | HPr family phosphocarrier protein | |
| Bamb_2917 | -2 | 10 | -0.018956 | PTS system fructose subfamily transporter | |
| Bamb_2918 | -1 | 10 | 1.768322 | glutathione synthetase | |
| Bamb_2919 | -2 | 10 | 2.214829 | glutamate--cysteine ligase | |
| Bamb_2920 | -2 | 9 | 2.706322 | ammonium transporter | |
| Bamb_2921 | 1 | 12 | 3.238112 | nitrogen regulatory protein P-II | |
| Bamb_2922 | 0 | 12 | 3.511259 | hypothetical protein | |
| Bamb_2923 | -1 | 11 | 2.703787 | Mg chelatase subunit ChlI | |
| Bamb_2924 | -1 | 13 | 1.194340 | hypothetical protein | |
| Bamb_2925 | -1 | 13 | 0.989952 | redoxin domain-containing protein | |
| Bamb_2926 | 0 | 14 | 1.805121 | two component sigma54 specific Fis family | |
| Bamb_2927 | 0 | 13 | 1.902447 | sensor signal transduction histidine kinase | |
| Bamb_2928 | -1 | 14 | 1.186976 | C4-dicarboxylate transporter DctA | |
| Bamb_2929 | 0 | 15 | 2.753742 | acetate permease | |
| Bamb_2930 | 0 | 14 | 3.007068 | hypothetical protein | |
| Bamb_2931 | 0 | 13 | 3.173642 | L-carnitine dehydratase/bile acid-inducible |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2915 | PHPHTRNFRASE | 595 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2926 | HTHFIS | 453 | e-159 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 41 | Bamb_2949 | Bamb_2957 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2949 | -2 | 10 | 3.126083 | ABC transporter-like protein | |
| Bamb_2950 | -2 | 11 | 3.429468 | hypothetical protein | |
| Bamb_2951 | -3 | 9 | 3.559329 | 5'-nucleotidase domain-containing protein | |
| Bamb_2952 | -1 | 8 | 3.640768 | Sel1 domain-containing protein | |
| Bamb_2953 | 0 | 9 | 2.863057 | biotin--protein ligase | |
| Bamb_2954 | 2 | 10 | 2.365699 | pantothenate kinase | |
| Bamb_2955 | 2 | 11 | 1.703327 | hypothetical protein | |
| Bamb_2956 | 1 | 9 | 1.360605 | bifunctional heptose 7-phosphate kinase/heptose | |
| Bamb_2957 | 2 | 10 | 1.731851 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2954 | PF03309 | 168 | 2e-53 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| 42 | Bamb_2990 | Bamb_3021 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2990 | -2 | 10 | 3.128217 | glutathione S-transferase domain-containing | |
| Bamb_2991 | -3 | 11 | 2.774888 | K+ channel inward rectifier domain-containing | |
| Bamb_2992 | -2 | 12 | 3.433856 | sulfate ABC transporter substrate-binding | |
| Bamb_2993 | -1 | 12 | 4.424844 | dihydrodipicolinate synthase | |
| Bamb_2994 | 1 | 13 | 4.359254 | LysR family transcriptional regulator | |
| Bamb_2995 | 1 | 12 | 4.254233 | major facilitator superfamily transporter | |
| Bamb_2996 | 1 | 12 | 3.832432 | TonB-dependent siderophore receptor | |
| Bamb_2997 | 5 | 11 | 4.889196 | glutathione S-transferase domain-containing | |
| Bamb_2998 | 3 | 8 | 3.820184 | LysR family transcriptional regulator | |
| Bamb_2999 | 3 | 8 | 3.573395 | aldehyde oxidase and xanthine dehydrogenase | |
| Bamb_3000 | 1 | 9 | 2.922900 | FAD-binding molybdopterin dehydrogenase | |
| Bamb_3001 | 1 | 10 | 2.753084 | ferredoxin | |
| Bamb_3002 | 1 | 12 | 2.354993 | hypothetical protein | |
| Bamb_3003 | 1 | 13 | 2.139712 | phospholipase C | |
| Bamb_3004 | 0 | 14 | 3.045258 | hypothetical protein | |
| Bamb_3005 | 2 | 15 | 2.594916 | glyoxalase/bleomycin resistance | |
| Bamb_3006 | 2 | 15 | 3.000852 | D-isomer specific 2-hydroxyacid dehydrogenase | |
| Bamb_3007 | 4 | 15 | 2.155602 | hydroxymethylglutaryl-CoA lyase | |
| Bamb_3008 | 4 | 13 | 1.606052 | YbaK/prolyl-tRNA synthetase associated | |
| Bamb_3009 | 4 | 13 | 1.291198 | hypothetical protein | |
| Bamb_3010 | 2 | 11 | 0.457857 | hypothetical protein | |
| Bamb_3011 | 0 | 9 | 0.645706 | AsnC family transcriptional regulator | |
| Bamb_3012 | -1 | 10 | 0.794485 | alpha/beta fold family hydrolase | |
| Bamb_3013 | -2 | 12 | 1.768758 | 2-nitropropane dioxygenase | |
| Bamb_3014 | -2 | 12 | 2.708826 | LysR family transcriptional regulator | |
| Bamb_3015 | -1 | 15 | 2.647729 | porin | |
| Bamb_3016 | -2 | 16 | 3.981278 | hypothetical protein | |
| Bamb_3017 | -2 | 18 | 3.517897 | bile acid:sodium symporter | |
| Bamb_3018 | -1 | 19 | 3.550590 | diguanylate cyclase/phosphodiesterase | |
| Bamb_3019 | 1 | 18 | 3.201593 | LacI family transcriptional regulator | |
| Bamb_3020 | 2 | 16 | 3.859814 | N-acylglucosamine 2-epimerase | |
| Bamb_3021 | 0 | 15 | 4.232407 | ribokinase-like domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2995 | TCRTETA | 32 | 0.003 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3002 | FRAGILYSIN | 30 | 0.001 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3015 | ECOLNEIPORIN | 86 | 3e-21 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3019 | HTHTETR | 30 | 0.014 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 43 | Bamb_3063 | Bamb_3071 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_3063 | 3 | 19 | -0.197373 | flagellar basal body P-ring protein | |
| Bamb_3064 | 4 | 21 | -0.832291 | flagellar basal body L-ring protein | |
| Bamb_3065 | 5 | 21 | -0.676999 | flagellar basal body rod protein FlgG | |
| Bamb_3066 | 3 | 16 | 1.466168 | flagellar basal body rod protein FlgF | |
| Bamb_3067 | 3 | 16 | 1.480704 | flagellar hook protein FlgE | |
| Bamb_3068 | 1 | 14 | 2.874994 | flagellar basal body rod modification protein | |
| Bamb_3069 | 1 | 12 | 2.909444 | flagellar basal body rod protein FlgC | |
| Bamb_3070 | -1 | 12 | 3.192629 | flagellar basal body rod protein FlgB | |
| Bamb_3071 | -2 | 9 | 3.317358 | flagellar basal body P-ring biosynthesis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3063 | FLGPRINGFLGI | 370 | e-129 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3064 | FLGLRINGFLGH | 215 | 5e-73 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3065 | FLGHOOKAP1 | 44 | 4e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3066 | FLGHOOKAP1 | 28 | 0.035 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3067 | FLGHOOKAP1 | 36 | 2e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3069 | FLGHOOKAP1 | 27 | 0.032 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 44 | Bamb_3100 | Bamb_3112 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_3100 | 0 | 11 | 3.377358 | two component LuxR family transcriptional | |
| Bamb_3101 | 0 | 11 | 4.028096 | amino acid permease-associated protein | |
| Bamb_3102 | 0 | 12 | 5.332165 | hypothetical protein | |
| Bamb_3103 | 2 | 10 | 5.354036 | PepSY-associated TM helix domain-containing | |
| Bamb_3104 | 0 | 11 | 4.555369 | flagellar protein FhlB | |
| Bamb_3105 | 1 | 12 | 3.393996 | hypothetical protein | |
| Bamb_3106 | 1 | 14 | 1.769747 | hypothetical protein | |
| Bamb_3107 | 2 | 12 | 2.393532 | flagellar protein FliS | |
| Bamb_3108 | 1 | 13 | 2.208108 | flagellar hook-basal body complex subunit FliE | |
| Bamb_3109 | 0 | 13 | 3.467260 | flagellar MS-ring protein | |
| Bamb_3110 | 0 | 11 | 3.560467 | flagellar motor switch protein G | |
| Bamb_3111 | 0 | 11 | 3.918552 | flagellar assembly protein H | |
| Bamb_3112 | -1 | 10 | 3.392388 | flagellar protein export ATPase FliI |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3100 | HTHFIS | 88 | 2e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3104 | TYPE3IMSPROT | 61 | 3e-14 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3108 | FLGHOOKFLIE | 65 | 3e-17 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3109 | FLGMRINGFLIF | 477 | e-165 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3110 | FLGMOTORFLIG | 297 | e-102 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3111 | FLGFLIH | 112 | 9e-33 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 45 | Bamb_3147 | Bamb_3152 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_3147 | 5 | 19 | -2.990832 | outer membrane efflux protein | |
| Bamb_3148 | 6 | 20 | -3.256783 | HlyD family type I secretion membrane fusion | |
| Bamb_3149 | 6 | 20 | -3.359964 | ABC transporter-like protein | |
| Bamb_3150 | 7 | 21 | -3.613702 | hypothetical protein | |
| Bamb_3151 | 6 | 20 | -2.732561 | OmpA/MotB domain-containing protein | |
| Bamb_3152 | 6 | 19 | -2.381907 | YadA domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3148 | RTXTOXIND | 250 | 1e-80 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3150 | PF07675 | 32 | 0.022 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3151 | OMPADOMAIN | 105 | 8e-29 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3152 | OMADHESIN | 75 | 3e-15 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| 46 | Bamb_0018 | Bamb_0032 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0018 | 0 | 11 | 0.290407 | hypothetical protein | |
| Bamb_0019 | 1 | 12 | 0.103063 | type III restriction enzyme, res subunit | |
| Bamb_0020 | -1 | 12 | -0.357716 | adenine-specific DNA-methyltransferase | |
| Bamb_0021 | -1 | 11 | -0.519812 | outer membrane protein (porin)-like protein | |
| Bamb_0022 | 0 | 12 | 0.704316 | two component transcriptional regulator | |
| Bamb_0023 | 0 | 12 | 0.882275 | sensor signal transduction histidine kinase | |
| Bamb_0024 | 1 | 13 | -0.387433 | binding-protein-dependent transport system inner | |
| Bamb_0025 | 0 | 13 | 0.929889 | ABC transporter-like protein | |
| Bamb_0026 | 0 | 13 | 1.300475 | nitrate/sulfonate/bicarbonate ABC transporter | |
| Bamb_0027 | 2 | 13 | 0.425162 | flagellar biosynthetic protein FliR | |
| Bamb_0028 | 2 | 12 | 0.010912 | flagellar biosynthesis protein FliQ | |
| Bamb_0029 | 1 | 13 | -0.126569 | flagellar biosynthesis protein FliP | |
| Bamb_0030 | 0 | 13 | 1.137321 | flagellar biosynthesis protein, FliO | |
| Bamb_0031 | 2 | 14 | 0.488108 | flagellar motor switch protein FliN | |
| Bamb_0032 | 1 | 14 | 0.358797 | flagellar motor switch protein FliM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0018 | cloacin | 32 | 6e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0021 | ECOLNEIPORIN | 58 | 2e-11 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0022 | HTHFIS | 96 | 4e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0023 | PF06580 | 53 | 1e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0027 | TYPE3IMRPROT | 156 | 6e-49 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0028 | TYPE3IMQPROT | 66 | 4e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0029 | FLGBIOSNFLIP | 289 | e-101 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0031 | FLGMOTORFLIN | 133 | 7e-43 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0032 | FLGMOTORFLIM | 272 | 4e-92 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| 47 | Bamb_0045 | Bamb_0055 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0045 | 1 | 11 | 1.591644 | general secretion pathway protein J | |
| Bamb_0046 | 1 | 10 | 1.218192 | general secretion pathway protein I | |
| Bamb_0047 | 0 | 8 | 0.711078 | general secretion pathway protein H | |
| Bamb_0048 | -1 | 8 | -0.148283 | general secretion pathway protein G | |
| Bamb_0049 | 0 | 7 | -0.127604 | general secretion pathway protein C | |
| Bamb_0050 | -1 | 8 | -0.564652 | general secretion pathway protein F | |
| Bamb_0051 | -1 | 9 | 0.342575 | general secretory pathway protein E | |
| Bamb_0052 | -1 | 8 | -0.301053 | general secretion pathway protein D | |
| Bamb_0053 | 0 | 9 | -0.915094 | lytic transglycosylase catalytic subunit | |
| Bamb_0054 | -1 | 9 | -0.513192 | cobalamin synthesis protein, P47K | |
| Bamb_0055 | -2 | 9 | 0.156797 | histone family protein DNA-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0045 | BCTERIALGSPG | 37 | 2e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0046 | BCTERIALGSPH | 28 | 0.007 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0047 | BCTERIALGSPH | 47 | 4e-09 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0048 | BCTERIALGSPG | 188 | 1e-64 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0050 | BCTERIALGSPF | 380 | e-132 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0052 | BCTERIALGSPD | 394 | e-129 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0055 | DNABINDINGHU | 108 | 1e-34 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 48 | Bamb_0108 | Bamb_0115 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0108 | -2 | 8 | 1.506160 | TetR family transcriptional regulator | |
| Bamb_0109 | -1 | 9 | 1.594919 | aminotransferase | |
| Bamb_0110 | -1 | 8 | 2.190595 | extracellular solute-binding protein | |
| Bamb_0111 | 0 | 9 | 2.447836 | FAD linked oxidase domain-containing protein | |
| Bamb_0112 | 0 | 9 | 1.853863 | PadR-like family transcriptional regulator | |
| Bamb_0113 | 0 | 10 | 1.357638 | MerR family transcriptional regulator | |
| Bamb_0114 | -1 | 12 | 1.457728 | heavy metal translocating P-type ATPase | |
| Bamb_0115 | -2 | 14 | 1.452013 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0108 | HTHTETR | 64 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0112 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0113 | YERSSTKINASE | 27 | 0.040 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0115 | cloacin | 27 | 0.020 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 49 | Bamb_0148 | Bamb_0156 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0148 | 1 | 10 | 1.625893 | hypothetical protein | |
| Bamb_0149 | 1 | 12 | 1.530518 | NAD-dependent epimerase/dehydratase | |
| Bamb_0150 | 0 | 11 | 1.419823 | methyltransferase | |
| Bamb_0151 | 0 | 12 | 0.903878 | hypothetical protein | |
| Bamb_0152 | -1 | 13 | 0.088935 | hypothetical protein | |
| Bamb_0153 | 0 | 12 | -0.558566 | hypothetical protein | |
| Bamb_0154 | 1 | 14 | -0.483498 | hypothetical protein | |
| Bamb_0155 | 2 | 12 | -0.499453 | flagellar hook-associated 2 domain-containing | |
| Bamb_0156 | -1 | 12 | -0.161744 | flagellin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0148 | SYCDCHAPRONE | 46 | 7e-08 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0149 | NUCEPIMERASE | 183 | 9e-58 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0151 | SYCDCHAPRONE | 42 | 2e-06 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0152 | SYCDCHAPRONE | 52 | 9e-10 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0153 | SYCDCHAPRONE | 36 | 3e-04 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0156 | FLAGELLIN | 98 | 2e-25 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 50 | Bamb_0168 | Bamb_0175 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0168 | 1 | 13 | 2.306349 | response regulator receiver protein | |
| Bamb_0169 | 1 | 12 | 2.388461 | CheA signal transduction histidine kinase | |
| Bamb_0170 | 1 | 13 | 2.009002 | CheW protein | |
| Bamb_0171 | 2 | 13 | 2.516897 | methyl-accepting chemotaxis sensory transducer | |
| Bamb_0172 | 0 | 15 | 2.398122 | chemotaxis protein CheR | |
| Bamb_0173 | -2 | 15 | 1.802576 | chemoreceptor glutamine deamidase CheD | |
| Bamb_0174 | -2 | 15 | 1.438916 | chemotaxis-specific methylesterase | |
| Bamb_0175 | -2 | 13 | 0.654156 | response regulator receiver protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0168 | HTHFIS | 85 | 1e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0169 | PF06580 | 47 | 2e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0171 | IGASERPTASE | 37 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0173 | BACYPHPHTASE | 31 | 0.007 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0174 | HTHFIS | 69 | 7e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0175 | HTHFIS | 88 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 51 | Bamb_0309 | Bamb_0317 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0309 | -2 | 9 | 0.819271 | hypothetical protein | |
| Bamb_0310 | -3 | 8 | -0.081657 | type IV pilus secretin PilQ | |
| Bamb_0311 | -3 | 10 | -1.392627 | shikimate kinase | |
| Bamb_0312 | -2 | 12 | -0.543079 | 3-dehydroquinate synthase | |
| Bamb_0313 | -3 | 13 | -0.061506 | deoxyguanosinetriphosphate | |
| Bamb_0314 | -3 | 11 | -0.491376 | glycerol-3-phosphate transporter periplasmic | |
| Bamb_0315 | -2 | 11 | -0.120675 | binding-protein-dependent transport system inner | |
| Bamb_0316 | -1 | 14 | -0.778005 | glycerol-3-phosphate transporter membrane | |
| Bamb_0317 | -1 | 14 | -0.715375 | glycerol-3-phosphate transporter ATP-binding |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0309 | PERTACTIN | 31 | 0.008 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0310 | BCTERIALGSPD | 209 | 8e-62 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0311 | CARBMTKINASE | 27 | 0.032 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0314 | MALTOSEBP | 41 | 7e-06 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0317 | PF05272 | 36 | 2e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 52 | Bamb_0608 | Bamb_0614 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0608 | -1 | 13 | -0.716113 | major facilitator superfamily transporter | |
| Bamb_0609 | -1 | 13 | 0.462114 | preprotein translocase subunit SecF | |
| Bamb_0610 | 0 | 12 | 0.725843 | preprotein translocase subunit SecD | |
| Bamb_0611 | 0 | 12 | 0.905188 | preprotein translocase subunit YajC | |
| Bamb_0612 | 0 | 13 | 1.340496 | queuine tRNA-ribosyltransferase | |
| Bamb_0613 | 0 | 12 | 1.546236 | S-adenosylmethionine--tRNA | |
| Bamb_0614 | -1 | 11 | 1.071223 | ATP-dependent DNA helicase RecG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0608 | TCRTETA | 32 | 0.004 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0609 | SECFTRNLCASE | 320 | e-111 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0610 | SECFTRNLCASE | 79 | 3e-18 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0614 | SECA | 35 | 0.002 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 53 | Bamb_0682 | Bamb_0692 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0682 | -1 | 14 | -0.282513 | short-chain dehydrogenase/reductase SDR | |
| Bamb_0683 | 0 | 19 | -0.016921 | serine hydroxymethyltransferase | |
| Bamb_0684 | 5 | 25 | 1.663008 | transcriptional regulator NrdR | |
| Bamb_0685 | 6 | 23 | 2.087949 | Tfp pilus assembly protein FimT-like protein | |
| Bamb_0686 | 4 | 21 | 1.697772 | hypothetical protein | |
| Bamb_0687 | 2 | 20 | 0.417935 | prepilin-type cleavage/methylation-like protein | |
| Bamb_0688 | -2 | 18 | -1.796140 | hypothetical protein | |
| Bamb_0689 | 0 | 10 | -2.719133 | Tfp pilus assembly protein PilE | |
| Bamb_0690 | 2 | 9 | -2.200384 | hypothetical protein | |
| Bamb_0691 | 1 | 10 | -2.051731 | membrane protein | |
| Bamb_0692 | -1 | 10 | -1.866121 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0682 | DHBDHDRGNASE | 87 | 1e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0685 | BCTERIALGSPH | 27 | 0.036 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0686 | PRTACTNFAMLY | 31 | 0.002 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0689 | BCTERIALGSPG | 41 | 2e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0692 | PREPILNPTASE | 27 | 0.009 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 54 | Bamb_0747 | Bamb_0768 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0747 | 3 | 47 | -11.329265 | NAD-dependent epimerase/dehydratase | |
| Bamb_0748 | 2 | 46 | -10.818267 | FkbM family methyltransferase | |
| Bamb_0749 | 3 | 42 | -9.376158 | hypothetical protein | |
| Bamb_0750 | 1 | 30 | -6.776703 | hypothetical protein | |
| Bamb_0751 | 0 | 25 | -5.671661 | dTDP-glucose 4,6-dehydratase | |
| Bamb_0752 | 2 | 32 | -5.782787 | glucose-1-phosphate thymidylyltransferase | |
| Bamb_0753 | 3 | 34 | -6.204603 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| Bamb_0754 | 2 | 32 | -6.245109 | dTDP-4-dehydrorhamnose reductase | |
| Bamb_0755 | 1 | 31 | -6.277883 | mannose-1-phosphate | |
| Bamb_0756 | 1 | 31 | -6.130340 | hypothetical protein | |
| Bamb_0757 | 0 | 31 | -5.782344 | type 11 methyltransferase | |
| Bamb_0758 | 0 | 29 | -4.915549 | group 1 glycosyl transferase | |
| Bamb_0759 | 0 | 26 | -3.330056 | GDP-mannose 4,6-dehydratase | |
| Bamb_0760 | 1 | 25 | -2.899013 | NAD-dependent epimerase/dehydratase | |
| Bamb_0761 | 3 | 27 | -3.570007 | group 1 glycosyl transferase | |
| Bamb_0762 | 2 | 24 | -3.725706 | group 1 glycosyl transferase | |
| Bamb_0763 | 2 | 19 | -3.250479 | NAD-dependent epimerase/dehydratase | |
| Bamb_0764 | 1 | 17 | -3.083316 | glycosyl transferase family protein | |
| Bamb_0765 | 0 | 14 | -2.609232 | polysaccharide biosynthesis protein CapD | |
| Bamb_0766 | 0 | 15 | -1.839075 | curculin domain-containing protein | |
| Bamb_0767 | -3 | 12 | -0.172840 | glycosyl transferase family protein | |
| Bamb_0768 | -1 | 13 | 1.239937 | UDP-glucose 4-epimerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0747 | NUCEPIMERASE | 98 | 2e-25 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0748 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0751 | NUCEPIMERASE | 176 | 9e-55 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0754 | NUCEPIMERASE | 49 | 7e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0757 | RTXTOXIND | 33 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0759 | NUCEPIMERASE | 97 | 4e-25 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0760 | NUCEPIMERASE | 122 | 2e-34 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0763 | NUCEPIMERASE | 114 | 2e-31 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0765 | NUCEPIMERASE | 72 | 1e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0766 | SUBTILISIN | 49 | 4e-08 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0767 | 60KDINNERMP | 29 | 0.033 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0768 | NUCEPIMERASE | 164 | 2e-50 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 55 | Bamb_0886 | Bamb_0892 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_0886 | 0 | 11 | 1.769963 | amidase | |
| Bamb_0887 | -1 | 12 | 1.528524 | GntR family transcriptional regulator | |
| Bamb_0888 | -1 | 11 | 2.167370 | peptidase C26 | |
| Bamb_0889 | -1 | 9 | 2.219436 | hypothetical protein | |
| Bamb_0890 | -1 | 8 | 1.542699 | hypothetical protein | |
| Bamb_0891 | -2 | 9 | 1.637574 | general substrate transporter | |
| Bamb_0892 | -2 | 10 | 2.296483 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0886 | MICOLLPTASE | 32 | 0.008 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0888 | SSBTLNINHBTR | 29 | 0.014 | Streptomyces subtilisin inhibitor signature. | |
>SSBTLNINHBTR#Streptomyces subtilisin inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0889 | RTXTOXIND | 29 | 0.012 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0891 | TCRTETA | 34 | 7e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_0892 | SYCDCHAPRONE | 48 | 2e-08 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 56 | Bamb_1072 | Bamb_1081 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1072 | -1 | 9 | 2.071727 | hypothetical protein | |
| Bamb_1073 | 1 | 13 | 1.486940 | glyoxalase/bleomycin resistance | |
| Bamb_1074 | 1 | 15 | 1.241787 | 2Fe-2S iron-sulfur cluster binding | |
| Bamb_1075 | 1 | 14 | 1.297130 | aldehyde oxidase and xanthine dehydrogenase | |
| Bamb_1076 | 1 | 15 | 1.070852 | outer membrane protein (porin) | |
| Bamb_1077 | 1 | 12 | 0.670885 | AraC family transcriptional regulator | |
| Bamb_1078 | 0 | 10 | 0.110832 | acriflavin resistance protein | |
| Bamb_1079 | 0 | 10 | 0.005109 | acriflavin resistance protein | |
| Bamb_1080 | -1 | 11 | 0.076844 | RND family efflux transporter MFP subunit | |
| Bamb_1081 | -2 | 10 | 0.000207 | IclR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1072 | IGASERPTASE | 44 | 2e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1076 | ECOLNEIPORIN | 66 | 2e-14 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1078 | ACRIFLAVINRP | 761 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1079 | ACRIFLAVINRP | 810 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1080 | RTXTOXIND | 50 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1081 | NEISSPPORIN | 30 | 0.008 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| 57 | Bamb_1340 | Bamb_1347 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1340 | 0 | 8 | 0.728952 | phospholipid/glycerol acyltransferase | |
| Bamb_1341 | -1 | 8 | 0.586578 | chorismate synthase | |
| Bamb_1342 | -1 | 9 | 0.117620 | LacI family transcriptional regulator | |
| Bamb_1343 | -1 | 10 | -0.542638 | ribokinase | |
| Bamb_1344 | -1 | 10 | -1.351007 | major facilitator superfamily transporter | |
| Bamb_1345 | -2 | 9 | -2.107687 | dihydrodipicolinate synthetase | |
| Bamb_1346 | -1 | 10 | -2.108404 | electron-transferring-flavoprotein | |
| Bamb_1347 | 0 | 10 | -1.085246 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1340 | TCRTETA | 30 | 0.034 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1344 | TCRTETB | 60 | 6e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1345 | PF03627 | 32 | 0.002 | PapG | |
>PF03627#PapG | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1347 | DHBDHDRGNASE | 114 | 9e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 58 | Bamb_1382 | Bamb_1405 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1382 | -2 | 13 | -0.847932 | translation initiation factor IF-2 | |
| Bamb_1383 | -3 | 7 | -0.641961 | ribosome-binding factor A | |
| Bamb_1384 | -1 | 10 | -0.656612 | tRNA pseudouridine synthase B | |
| Bamb_1385 | -1 | 14 | -1.908869 | EmrB/QacA family drug resistance transporter | |
| Bamb_1386 | -1 | 18 | -2.117416 | secretion protein HlyD family protein | |
| Bamb_1387 | 0 | 17 | -2.471412 | RND efflux system outer membrane lipoprotein | |
| Bamb_1388 | 0 | 17 | -3.324332 | MarR family transcriptional regulator | |
| Bamb_1389 | 0 | 17 | -3.404348 | GTP-binding protein TypA | |
| Bamb_1390 | 0 | 17 | -3.625624 | 2-oxoglutarate dehydrogenase E1 component | |
| Bamb_1391 | -2 | 14 | -3.271244 | dihydrolipoamide succinyltransferase | |
| Bamb_1392 | 0 | 11 | -1.937107 | dihydrolipoamide dehydrogenase | |
| Bamb_1393 | 3 | 15 | 0.039803 | AFG1 family ATPase | |
| Bamb_1394 | 5 | 19 | 0.465172 | hypothetical protein | |
| Bamb_1395 | 4 | 21 | 0.092526 | hypothetical protein | |
| Bamb_1396 | 4 | 21 | -0.014524 | polypeptide-transport-associated | |
| Bamb_1397 | 5 | 27 | 1.680583 | hypothetical protein | |
| Bamb_1398 | 3 | 26 | -0.225020 | hypothetical protein | |
| Bamb_1399 | 2 | 28 | -1.991283 | Flp/Fap pilin component | |
| Bamb_1400 | 1 | 24 | -1.881645 | peptidase A24A, prepilin type IV | |
| Bamb_1401 | 0 | 20 | -1.137024 | TadE family protein | |
| Bamb_1402 | 1 | 20 | -1.051317 | CpaB family Flp pilus assembly protein | |
| Bamb_1403 | 1 | 19 | -1.489834 | type II and III secretion system protein | |
| Bamb_1404 | 2 | 20 | -1.267941 | response regulator receiver protein | |
| Bamb_1405 | 2 | 21 | -1.814949 | type II secretion system protein E |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1382 | TCRTETOQM | 71 | 1e-14 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1385 | TCRTETB | 133 | 2e-36 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1386 | RTXTOXIND | 71 | 1e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1388 | FLGMOTORFLIM | 28 | 0.027 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1389 | TCRTETOQM | 169 | 3e-47 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1391 | RTXTOXIND | 32 | 0.005 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1392 | INTIMIN | 31 | 0.015 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1397 | RTXTOXINA | 29 | 0.048 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1398 | cloacin | 35 | 8e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1400 | PREPILNPTASE | 43 | 2e-07 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1403 | BCTERIALGSPD | 133 | 5e-36 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1404 | HTHFIS | 40 | 1e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1405 | cloacin | 30 | 0.031 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 59 | Bamb_1411 | Bamb_1418 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1411 | -1 | 11 | -1.407901 | sigma-54 dependent trancsriptional regulator | |
| Bamb_1412 | -2 | 10 | -0.730311 | hypothetical protein | |
| Bamb_1413 | -2 | 8 | -0.771445 | RNA chaperone Hfq | |
| Bamb_1414 | -1 | 7 | -0.879398 | hypothetical protein | |
| Bamb_1415 | -2 | 6 | -0.992871 | hypothetical protein | |
| Bamb_1416 | 0 | 8 | -0.160942 | AMP-dependent synthetase and ligase | |
| Bamb_1417 | 1 | 8 | 1.200488 | TetR family transcriptional regulator | |
| Bamb_1418 | 0 | 8 | 0.575993 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1411 | HTHFIS | 293 | 1e-96 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1412 | RTXTOXIND | 34 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1417 | HTHTETR | 69 | 4e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1418 | TCRTETA | 68 | 1e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 60 | Bamb_1428 | Bamb_1442 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1428 | -1 | 9 | -1.562220 | chitinase | |
| Bamb_1429 | -2 | 10 | 0.377358 | N-acetylglucosamine-binding protein A | |
| Bamb_1430 | -1 | 13 | 1.577556 | general secretion pathway protein G | |
| Bamb_1431 | 0 | 12 | 1.853439 | lytic transglycosylase catalytic subunit | |
| Bamb_1432 | 0 | 12 | 2.491608 | type II secretion system protein | |
| Bamb_1433 | -1 | 9 | 2.363001 | type II secretion system protein E | |
| Bamb_1434 | -1 | 10 | 2.445090 | hypothetical protein | |
| Bamb_1435 | -1 | 9 | 1.319619 | hypothetical protein | |
| Bamb_1436 | -2 | 10 | 1.663175 | hypothetical protein | |
| Bamb_1437 | -3 | 10 | 1.062544 | hypothetical protein | |
| Bamb_1438 | -3 | 11 | 0.808725 | type II and III secretion system protein | |
| Bamb_1439 | -1 | 19 | -1.323710 | general secretion pathway GspG related | |
| Bamb_1440 | -1 | 22 | -2.633841 | type II secretion system protein G | |
| Bamb_1441 | 2 | 25 | -4.671966 | hypothetical protein | |
| Bamb_1442 | -1 | 11 | -3.367680 | two component transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1428 | cloacin | 45 | 1e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1430 | BCTERIALGSPG | 128 | 6e-41 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1432 | BCTERIALGSPF | 198 | 1e-61 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1435 | CHANLCOLICIN | 29 | 0.010 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1437 | TONBPROTEIN | 27 | 0.028 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1438 | BCTERIALGSPD | 165 | 9e-45 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1439 | BCTERIALGSPG | 54 | 4e-12 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1440 | BCTERIALGSPG | 73 | 1e-19 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1442 | HTHFIS | 59 | 2e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 61 | Bamb_1519 | Bamb_1524 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1519 | 0 | 9 | 1.553779 | TetR family transcriptional regulator | |
| Bamb_1520 | 0 | 10 | 1.414028 | periplasmic multidrug efflux lipoprotein | |
| Bamb_1521 | 0 | 11 | 0.491922 | multidrug efflux protein | |
| Bamb_1522 | 2 | 10 | -0.103630 | RND efflux system outer membrane lipoprotein | |
| Bamb_1523 | 2 | 11 | -1.518535 | fimbrial protein | |
| Bamb_1524 | 2 | 13 | -0.845205 | fimbrial biogenesis outer membrane usher |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1519 | HTHTETR | 107 | 3e-31 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1520 | RTXTOXIND | 41 | 6e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1521 | ACRIFLAVINRP | 1082 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1524 | PF00577 | 679 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 62 | Bamb_1874 | Bamb_1881 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_1874 | 0 | 24 | -2.479313 | peptidase S14, ClpP | |
| Bamb_1875 | 1 | 23 | -3.487409 | lambda family phage portal protein | |
| Bamb_1876 | 0 | 25 | -4.188482 | hypothetical protein | |
| Bamb_1877 | 1 | 26 | -4.523568 | phage terminase GpA | |
| Bamb_1878 | 0 | 29 | -4.993344 | hypothetical protein | |
| Bamb_1879 | 1 | 28 | -4.770295 | hypothetical protein | |
| Bamb_1880 | 2 | 27 | -4.740935 | virulence-associated E family protein | |
| Bamb_1881 | 6 | 51 | -9.542896 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1874 | TONBPROTEIN | 33 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1875 | PHPHTRNFRASE | 29 | 0.038 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1877 | TONBPROTEIN | 29 | 0.049 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1880 | PF05272 | 563 | 0.0 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_1881 | CHANLCOLICIN | 28 | 0.014 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 63 | Bamb_2095 | Bamb_2102 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2095 | 2 | 9 | 3.069613 | hypothetical protein | |
| Bamb_2096 | 4 | 8 | 2.960237 | acriflavin resistance protein | |
| Bamb_2097 | 4 | 10 | 3.002161 | RND family efflux transporter MFP subunit | |
| Bamb_2098 | 3 | 11 | 2.444523 | RND efflux system outer membrane lipoprotein | |
| Bamb_2099 | 4 | 10 | 0.921464 | hypothetical protein | |
| Bamb_2100 | 3 | 10 | 0.492743 | two component transcriptional regulator | |
| Bamb_2101 | 4 | 12 | -1.672933 | sensor signal transduction histidine kinase | |
| Bamb_2102 | 1 | 12 | -3.198446 | two component transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2095 | TONBPROTEIN | 28 | 0.006 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2096 | ACRIFLAVINRP | 624 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2097 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2102 | HTHFIS | 78 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 64 | Bamb_2170 | Bamb_2176 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2170 | 0 | 15 | -1.986335 | peptidase S11, D-alanyl-D-alanine | |
| Bamb_2171 | 1 | 14 | -2.160841 | phasin family protein | |
| Bamb_2172 | 0 | 14 | -1.687276 | dihydrolipoamide dehydrogenase | |
| Bamb_2173 | -1 | 13 | -1.124076 | dihydrolipoamide acetyltransferase | |
| Bamb_2174 | -2 | 11 | -1.128731 | pyruvate dehydrogenase subunit E1 | |
| Bamb_2175 | -3 | 8 | -0.414917 | multi-sensor signal transduction histidine | |
| Bamb_2176 | -3 | 10 | -0.265499 | two component LuxR family transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2170 | BLACTAMASEA | 33 | 0.001 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2172 | RTXTOXIND | 31 | 0.021 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2173 | RTXTOXIND | 35 | 7e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2176 | HTHFIS | 112 | 3e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 65 | Bamb_2249 | Bamb_2253 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2249 | -2 | 13 | -2.933830 | aromatic amino acid aminotransferase | |
| Bamb_2250 | -1 | 17 | -3.736376 | 3-hydroxybutyrate dehydrogenase | |
| Bamb_2251 | 1 | 20 | -3.311156 | aldo/keto reductase | |
| Bamb_2252 | 1 | 22 | -2.989101 | hypothetical protein | |
| Bamb_2253 | 0 | 23 | -1.764126 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2249 | PF05272 | 32 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2250 | DHBDHDRGNASE | 103 | 8e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2252 | PF06872 | 30 | 0.010 | EspG protein | |
>PF06872#EspG protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2253 | YERSSTKINASE | 28 | 0.010 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 66 | Bamb_2341 | Bamb_2346 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2341 | 1 | 10 | 2.885232 | hypothetical protein | |
| Bamb_2342 | -1 | 10 | 1.992872 | PRC-barrel domain-containing protein | |
| Bamb_2343 | 0 | 11 | 1.266336 | major facilitator superfamily transporter | |
| Bamb_2344 | 0 | 11 | 1.276370 | hypothetical protein | |
| Bamb_2345 | -1 | 9 | 1.724102 | hypothetical protein | |
| Bamb_2346 | -2 | 9 | 1.918248 | lipid A ABC transporter ATPase/inner membrane |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2341 | cloacin | 32 | 0.003 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2342 | TONBPROTEIN | 33 | 0.001 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2343 | TCRTETA | 56 | 1e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2346 | ACRIFLAVINRP | 30 | 0.032 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 67 | Bamb_2360 | Bamb_2365 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2360 | -1 | 13 | 1.274953 | cell division protein FtsK | |
| Bamb_2361 | -1 | 11 | -0.410520 | 3-carboxymuconate cyclase-like protein | |
| Bamb_2362 | -3 | 9 | 0.631407 | glycoside hydrolase 15-like protein | |
| Bamb_2363 | -3 | 11 | 0.629545 | polyhydroxyalkanoate depolymerase | |
| Bamb_2364 | -2 | 11 | 0.851258 | TetR family transcriptional regulator | |
| Bamb_2365 | -2 | 13 | 1.477358 | ferredoxin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2360 | PYOCINKILLER | 37 | 8e-04 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2363 | FLGHOOKFLIK | 29 | 0.036 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2364 | HTHTETR | 74 | 2e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2365 | RTXTOXIND | 33 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 68 | Bamb_2430 | Bamb_2438 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2430 | 5 | 14 | 2.175927 | short-chain dehydrogenase/reductase SDR | |
| Bamb_2431 | 4 | 10 | 2.215466 | TetR family transcriptional regulator | |
| Bamb_2432 | 5 | 11 | 2.413640 | ecotin | |
| Bamb_2433 | 3 | 11 | 1.638203 | hypothetical protein | |
| Bamb_2434 | 2 | 11 | 1.434442 | hypothetical protein | |
| Bamb_2435 | 1 | 10 | 1.541846 | hypothetical protein | |
| Bamb_2436 | 0 | 12 | 1.442835 | major facilitator superfamily transporter | |
| Bamb_2437 | -2 | 12 | 0.472994 | ATPase-like protein | |
| Bamb_2438 | -1 | 10 | -0.464522 | alpha,alpha-trehalose-phosphate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2430 | DHBDHDRGNASE | 124 | 6e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2431 | HTHTETR | 54 | 3e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2433 | cloacin | 33 | 2e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2436 | TCRTETB | 111 | 1e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2438 | TYPE3IMPPROT | 29 | 0.029 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| 69 | Bamb_2636 | Bamb_2649 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2636 | 1 | 13 | 3.471343 | major facilitator superfamily transporter | |
| Bamb_2637 | 0 | 13 | 2.102385 | beta-lactamase | |
| Bamb_2638 | -2 | 15 | 0.770246 | LysR family transcriptional regulator | |
| Bamb_2639 | -1 | 15 | 1.635799 | ABC transporter-like protein | |
| Bamb_2640 | 0 | 13 | 2.425499 | HAD family hydrolase | |
| Bamb_2641 | 0 | 13 | 1.846500 | binding-protein-dependent transport system inner | |
| Bamb_2642 | 1 | 13 | 2.399992 | binding-protein-dependent transport system inner | |
| Bamb_2643 | -1 | 14 | 2.676807 | extracellular solute-binding protein | |
| Bamb_2644 | 2 | 14 | 3.423965 | tagatose-6-phosphate kinase | |
| Bamb_2645 | 0 | 13 | 2.761235 | ribokinase-like domain-containing protein | |
| Bamb_2646 | -1 | 11 | 2.054395 | sorbitol dehydrogenase | |
| Bamb_2647 | -2 | 9 | 3.570669 | ferric uptake regulator family protein | |
| Bamb_2648 | -1 | 8 | 2.489902 | periplasmic solute binding protein | |
| Bamb_2649 | -1 | 10 | 2.519355 | ABC transporter-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2636 | TCRTETB | 38 | 7e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2637 | BLACTAMASEA | 29 | 0.022 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2639 | PF05272 | 30 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2641 | RTXTOXIND | 28 | 0.044 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2643 | MALTOSEBP | 34 | 0.001 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2646 | DHBDHDRGNASE | 130 | 8e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2648 | ADHESNFAMILY | 131 | 2e-38 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2649 | PF05272 | 30 | 0.013 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 70 | Bamb_2655 | Bamb_2663 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2655 | -1 | 10 | 0.010052 | hydrophobe/amphiphile efflux-1 (HAE1) family | |
| Bamb_2656 | -2 | 6 | 2.254636 | RND family efflux transporter MFP subunit | |
| Bamb_2657 | 1 | 8 | 2.305368 | TetR family transcriptional regulator | |
| Bamb_2658 | 0 | 8 | 2.647118 | isochorismatase hydrolase | |
| Bamb_2659 | -2 | 9 | 3.218182 | AraC family transcriptional regulator | |
| Bamb_2660 | -2 | 10 | 2.470040 | carbon monoxide dehydrogenase subunit G | |
| Bamb_2661 | -2 | 10 | 2.357900 | hypothetical protein | |
| Bamb_2662 | -3 | 9 | 1.917575 | hypothetical protein | |
| Bamb_2663 | -2 | 10 | 1.824249 | protease Do |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2655 | ACRIFLAVINRP | 1267 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2656 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2657 | HTHTETR | 117 | 6e-35 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2658 | ISCHRISMTASE | 42 | 1e-06 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2663 | V8PROTEASE | 72 | 6e-16 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 71 | Bamb_2831 | Bamb_2838 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2831 | 0 | 15 | -1.897749 | fimbrial biogenesis outer membrane usher | |
| Bamb_2832 | -2 | 19 | -2.682404 | pili assembly chaperone | |
| Bamb_2833 | -1 | 16 | -2.181779 | fimbrial protein | |
| Bamb_2834 | -2 | 10 | -1.592372 | Hpt sensor hybrid histidine kinase | |
| Bamb_2835 | -1 | 11 | -1.959679 | two component LuxR family transcriptional | |
| Bamb_2836 | -1 | 11 | -1.666501 | transposase IS3/IS911 family protein | |
| Bamb_2837 | -1 | 13 | -0.655332 | single-stranded DNA-binding protein | |
| Bamb_2838 | 0 | 14 | -0.629628 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2831 | PF00577 | 748 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2833 | NEISSPPORIN | 28 | 0.028 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2834 | HTHFIS | 59 | 4e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2837 | cloacin | 42 | 6e-07 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2838 | TCRTETA | 87 | 7e-21 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 72 | Bamb_2965 | Bamb_2972 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_2965 | 0 | 13 | -0.924043 | methionine synthase | |
| Bamb_2966 | 0 | 13 | -0.550812 | methionine synthase | |
| Bamb_2967 | 2 | 14 | -0.040058 | hypothetical protein | |
| Bamb_2968 | 0 | 12 | 1.177099 | arginyl-tRNA synthetase | |
| Bamb_2969 | 0 | 11 | 1.301492 | sporulation domain-containing protein | |
| Bamb_2970 | -1 | 11 | -0.190116 | DSBA oxidoreductase | |
| Bamb_2971 | -2 | 11 | 0.107438 | short chain dehydrogenase | |
| Bamb_2972 | -2 | 11 | -0.062979 | extracellular solute-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2965 | YERSINIAYOPE | 28 | 0.040 | Yersinia virulence determinant YopE protein signature. | |
>YERSINIAYOPE#Yersinia virulence determinant YopE protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2969 | IGASERPTASE | 34 | 9e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2971 | DHBDHDRGNASE | 73 | 2e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_2972 | BINARYTOXINB | 29 | 0.049 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| 73 | Bamb_3055 | Bamb_3069 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_3055 | 0 | 12 | 2.055664 | chromate transporter | |
| Bamb_3056 | 0 | 12 | 2.063213 | chromate transporter | |
| Bamb_3057 | -1 | 14 | 2.038384 | DNA-binding transcriptional activator GcvA | |
| Bamb_3058 | 0 | 15 | 1.953901 | uracil-xanthine permease | |
| Bamb_3059 | 0 | 14 | 1.747875 | flagellar hook-associated protein FlgL | |
| Bamb_3060 | 0 | 16 | 1.302807 | flagellar hook-associated protein FlgK | |
| Bamb_3061 | -2 | 16 | 1.088353 | YcgR family protein | |
| Bamb_3062 | -1 | 18 | 0.360727 | flagellar rod assembly protein/muramidase FlgJ | |
| Bamb_3063 | 3 | 19 | -0.197373 | flagellar basal body P-ring protein | |
| Bamb_3064 | 4 | 21 | -0.832291 | flagellar basal body L-ring protein | |
| Bamb_3065 | 5 | 21 | -0.676999 | flagellar basal body rod protein FlgG | |
| Bamb_3066 | 3 | 16 | 1.466168 | flagellar basal body rod protein FlgF | |
| Bamb_3067 | 3 | 16 | 1.480704 | flagellar hook protein FlgE | |
| Bamb_3068 | 1 | 14 | 2.874994 | flagellar basal body rod modification protein | |
| Bamb_3069 | 1 | 12 | 2.909444 | flagellar basal body rod protein FlgC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3055 | ACRIFLAVINRP | 28 | 0.021 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3059 | FLAGELLIN | 46 | 2e-07 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3060 | FLGHOOKAP1 | 218 | 3e-65 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3062 | FLGFLGJ | 219 | 9e-72 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3063 | FLGPRINGFLGI | 370 | e-129 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3064 | FLGLRINGFLGH | 215 | 5e-73 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3065 | FLGHOOKAP1 | 44 | 4e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3066 | FLGHOOKAP1 | 28 | 0.035 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3067 | FLGHOOKAP1 | 36 | 2e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3069 | FLGHOOKAP1 | 27 | 0.032 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 74 | Bamb_3104 | Bamb_3114 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_3104 | 0 | 11 | 4.555369 | flagellar protein FhlB | |
| Bamb_3105 | 1 | 12 | 3.393996 | hypothetical protein | |
| Bamb_3106 | 1 | 14 | 1.769747 | hypothetical protein | |
| Bamb_3107 | 2 | 12 | 2.393532 | flagellar protein FliS | |
| Bamb_3108 | 1 | 13 | 2.208108 | flagellar hook-basal body complex subunit FliE | |
| Bamb_3109 | 0 | 13 | 3.467260 | flagellar MS-ring protein | |
| Bamb_3110 | 0 | 11 | 3.560467 | flagellar motor switch protein G | |
| Bamb_3111 | 0 | 11 | 3.918552 | flagellar assembly protein H | |
| Bamb_3112 | -1 | 10 | 3.392388 | flagellar protein export ATPase FliI | |
| Bamb_3113 | 0 | 10 | 2.979373 | flagellar export protein FliJ | |
| Bamb_3114 | -1 | 9 | 2.871481 | flagellar hook-length control protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3104 | TYPE3IMSPROT | 61 | 3e-14 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3108 | FLGHOOKFLIE | 65 | 3e-17 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3109 | FLGMRINGFLIF | 477 | e-165 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3110 | FLGMOTORFLIG | 297 | e-102 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3111 | FLGFLIH | 112 | 9e-33 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3113 | FLGFLIJ | 64 | 1e-15 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3114 | FLGHOOKFLIK | 66 | 4e-14 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| 75 | Bamb_3139 | Bamb_3152 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_3139 | -1 | 12 | 0.240076 | ATP-dependent protease ATP-binding subunit HslU | |
| Bamb_3140 | 1 | 12 | 1.003041 | response regulator receiver protein | |
| Bamb_3141 | 0 | 13 | 1.374399 | sensor signal transduction histidine kinase | |
| Bamb_3142 | 0 | 15 | 0.033985 | hypothetical protein | |
| Bamb_3143 | -1 | 15 | -0.356624 | acetylglutamate kinase | |
| Bamb_3144 | -1 | 18 | -0.282806 | pyrimidine 5'-nucleotidase | |
| Bamb_3145 | -1 | 21 | -2.301072 | nucleoid occlusion protein | |
| Bamb_3146 | 0 | 22 | -2.213541 | hypothetical protein | |
| Bamb_3147 | 5 | 19 | -2.990832 | outer membrane efflux protein | |
| Bamb_3148 | 6 | 20 | -3.256783 | HlyD family type I secretion membrane fusion | |
| Bamb_3149 | 6 | 20 | -3.359964 | ABC transporter-like protein | |
| Bamb_3150 | 7 | 21 | -3.613702 | hypothetical protein | |
| Bamb_3151 | 6 | 20 | -2.732561 | OmpA/MotB domain-containing protein | |
| Bamb_3152 | 6 | 19 | -2.381907 | YadA domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3139 | HTHFIS | 31 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3140 | HTHFIS | 90 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3143 | CARBMTKINASE | 43 | 6e-07 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3145 | HTHTETR | 46 | 2e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3148 | RTXTOXIND | 250 | 1e-80 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3150 | PF07675 | 32 | 0.022 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3151 | OMPADOMAIN | 105 | 8e-29 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3152 | OMADHESIN | 75 | 3e-15 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| 76 | Bamb_3165 | Bamb_3171 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| Bamb_3165 | -2 | 12 | 0.567366 | rod shape-determining protein MreB | |
| Bamb_3166 | -3 | 11 | 1.545086 | rod shape-determining protein MreC | |
| Bamb_3167 | -2 | 12 | 0.916663 | rod shape-determining protein MreD | |
| Bamb_3168 | -2 | 12 | 0.653551 | peptidoglycan glycosyltransferase | |
| Bamb_3169 | -2 | 10 | 0.554600 | rod shape-determining protein RodA | |
| Bamb_3170 | -2 | 10 | 0.872471 | Sel1 domain-containing protein | |
| Bamb_3171 | -1 | 11 | 0.066736 | 2-dehydro-3-deoxyglucarate aldolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3165 | SHAPEPROTEIN | 504 | 0.0 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3166 | IGASERPTASE | 31 | 0.009 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3168 | OMADHESIN | 30 | 0.047 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| Bamb_3171 | PHPHTRNFRASE | 37 | 6e-05 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||