| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | T303_RS00185 | T303_RS00280 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS00185 | 2 | 15 | 1.401437 | membrane protein | |
| T303_RS00190 | 2 | 16 | 0.872891 | glutamyl aminopeptidase | |
| T303_RS00195 | 5 | 21 | -0.585889 | pyrroline-5-carboxylate reductase | |
| T303_RS00200 | 0 | 16 | -0.816021 | CAAX protease family protein | |
| T303_RS00205 | 0 | 15 | -0.929169 | hypothetical protein | |
| T303_RS00210 | -1 | 14 | -0.213319 | CAAX protease family protein | |
| T303_RS00215 | -1 | 15 | 0.030194 | hypothetical protein | |
| T303_RS00220 | -2 | 15 | 0.289299 | acetate kinase | |
| T303_RS00225 | -2 | 16 | 0.543574 | adenine methyltransferase | |
| T303_RS00230 | 2 | 22 | -0.279950 | hypothetical protein | |
| T303_RS00235 | 2 | 29 | 0.828425 | competence protein ComG | |
| T303_RS00245 | 1 | 27 | 1.345707 | competence protein ComGE | |
| T303_RS00250 | 0 | 19 | 2.634971 | hypothetical protein | |
| T303_RS00255 | 3 | 26 | 2.606830 | competence protein ComGC | |
| T303_RS00260 | 2 | 20 | 2.312975 | competence protein CglB | |
| T303_RS00265 | 3 | 23 | 2.378821 | late competence protein ABC transporter subunit | |
| T303_RS00270 | 4 | 29 | 2.116295 | superoxide dismutase | |
| T303_RS00275 | 4 | 28 | 2.221782 | DNA-directed RNA polymerase subunit beta' | |
| T303_RS00280 | 2 | 21 | 1.692744 | DNA-directed RNA polymerase subunit beta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS00205 | SECFTRNLCASE | 27 | 0.036 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS00225 | ACETATEKNASE | 498 | e-179 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS00255 | BCTERIALGSPG | 51 | 2e-11 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS00260 | BCTERIALGSPF | 86 | 2e-21 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| 2 | T303_RS00820 | T303_RS00915 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS00820 | 2 | 29 | -4.182356 | hypothetical protein | |
| T303_RS00825 | 2 | 30 | -5.180876 | methionine synthase | |
| T303_RS00830 | 0 | 28 | -6.792893 | 50S ribosomal protein L32 | |
| T303_RS00835 | -1 | 27 | -6.945372 | 50S ribosomal protein L33 | |
| T303_RS00840 | 0 | 28 | -7.749095 | hypothetical protein | |
| T303_RS00845 | 3 | 29 | -6.992055 | hypothetical protein | |
| T303_RS00850 | 1 | 26 | -7.323370 | hypothetical protein | |
| T303_RS00855 | 0 | 29 | -6.533683 | membrane protein | |
| T303_RS00860 | 0 | 31 | -6.609099 | hypothetical protein | |
| T303_RS00865 | 2 | 28 | -6.665453 | general stress protein | |
| T303_RS00870 | 2 | 23 | -4.462599 | CsbD family protein | |
| T303_RS00875 | 2 | 23 | -4.979722 | phosphohydrolase | |
| T303_RS00890 | 2 | 22 | -4.601049 | hypothetical protein | |
| T303_RS00895 | 2 | 18 | -3.135184 | hypothetical protein | |
| T303_RS00900 | 3 | 17 | -3.165222 | membrane protein | |
| T303_RS00905 | 6 | 19 | -4.162750 | TetR family transcriptional regulator | |
| T303_RS00910 | 5 | 18 | -3.290077 | membrane protein | |
| T303_RS00915 | 4 | 17 | -3.367230 | 30S ribosomal protein S4 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS00920 | FLAGELLIN | 37 | 3e-04 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS00925 | HTHTETR | 46 | 2e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 3 | T303_RS00985 | T303_RS01075 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS00985 | -2 | 21 | -3.261216 | peptidoglycan-binding protein LysM | |
| T303_RS00990 | -2 | 23 | -4.485348 | ABC transporter membrane-spanning protein | |
| T303_RS00995 | -1 | 25 | -4.780966 | energy-coupling factor transporter ATPase | |
| T303_RS01000 | -2 | 25 | -5.603621 | energy-coupling factor transporter ATPase | |
| T303_RS01005 | -1 | 23 | -5.818950 | CDP-diacylglycerol--glycerol-3-phosphate | |
| T303_RS01010 | -2 | 18 | -4.340720 | membrane protein | |
| T303_RS01015 | -3 | 17 | -3.706509 | peptidase M16 | |
| T303_RS01020 | -3 | 17 | -2.860745 | peptidase M16 | |
| T303_RS01025 | -3 | 15 | -1.438423 | DNA replication/repair protein RecF | |
| T303_RS01030 | -2 | 13 | -2.196983 | IMP dehydrogenase | |
| T303_RS01035 | -2 | 14 | -2.213049 | tryptophan--tRNA ligase | |
| T303_RS01040 | -1 | 15 | -2.901903 | membrane protein | |
| T303_RS01045 | 0 | 16 | -2.779819 | ABC-F family ATPase | |
| T303_RS01050 | 0 | 15 | -2.928615 | ABC transporter permease | |
| T303_RS01055 | 1 | 19 | -3.636992 | ***23S rRNA | |
| T303_RS01075 | -1 | 18 | -3.261088 | serine protease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01050 | PF05272 | 32 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01085 | V8PROTEASE | 65 | 1e-13 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 4 | T303_RS01670 | T303_RS01800 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS01670 | 2 | 19 | 1.707782 | hypothetical protein | |
| T303_RS01675 | 1 | 17 | 0.522186 | 23S rRNA | |
| T303_RS01680 | -2 | 16 | -0.225322 | hypothetical protein | |
| T303_RS01685 | -1 | 13 | -0.075550 | hypothetical protein | |
| T303_RS01695 | 1 | 15 | -0.038866 | hypothetical protein | |
| T303_RS01700 | 2 | 17 | -0.655013 | 2-dehydropantoate 2-reductase | |
| T303_RS01705 | 3 | 18 | 0.025446 | 50S ribosomal protein L13 | |
| T303_RS01710 | 1 | 21 | -6.065019 | 30S ribosomal protein S9 | |
| T303_RS01715 | 0 | 26 | -7.279043 | ISL3 family transposase | |
| T303_RS01720 | 1 | 30 | -8.568221 | hypothetical protein | |
| T303_RS01725 | 3 | 36 | -9.932039 | lantibiotic biosynthesis protein | |
| T303_RS01730 | 2 | 34 | -9.931454 | lantibiotic transporter | |
| T303_RS01735 | 2 | 34 | -9.857099 | Fis family transcriptional regulator | |
| T303_RS01740 | 2 | 32 | -8.921030 | hypothetical protein | |
| T303_RS01745 | 0 | 29 | -6.839516 | metallophosphatase | |
| T303_RS01755 | 1 | 22 | -4.048658 | hypothetical protein | |
| T303_RS01760 | 1 | 20 | -2.942566 | PFL family protein | |
| T303_RS01765 | 1 | 14 | -1.183668 | D-alanyl-D-alanine carboxypeptidase | |
| T303_RS01770 | 1 | 12 | 1.412573 | peptidoglycan hydrolase | |
| T303_RS01775 | 0 | 16 | 0.535568 | heat-inducible transcriptional repressor HrcA | |
| T303_RS01780 | -1 | 18 | 0.896535 | nucleotide exchange factor GrpE | |
| T303_RS01785 | -1 | 17 | 0.690320 | molecular chaperone DnaK | |
| T303_RS01790 | -1 | 14 | 0.944330 | chaperone DnaJ | |
| T303_RS09730 | 2 | 18 | 0.561006 | tRNA pseudouridine synthase A | |
| T303_RS01800 | 2 | 18 | 1.080923 | hydroxymethylpyrimidine/phosphomethylpyrimidine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01700 | PF06580 | 27 | 0.048 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01720 | PREPILNPTASE | 31 | 0.009 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01805 | FLGFLGJ | 53 | 1e-10 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01815 | IGASERPTASE | 37 | 3e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01820 | SHAPEPROTEIN | 156 | 1e-44 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 5 | T303_RS02495 | T303_RS02610 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS02495 | 3 | 22 | -3.461625 | membrane protein | |
| T303_RS02500 | 1 | 23 | -3.633072 | phosphatase PAP2 family protein | |
| T303_RS02505 | 3 | 23 | -3.680628 | transcriptional regulator | |
| T303_RS09735 | 0 | 19 | -2.098401 | peptide ABC transporter ATP-binding protein | |
| T303_RS02515 | 1 | 21 | -1.594851 | peptide ABC transporter ATP-binding protein | |
| T303_RS02520 | 1 | 22 | -1.345154 | hypothetical protein | |
| T303_RS02525 | -1 | 22 | -0.941837 | peptide ABC transporter ATP-binding protein | |
| T303_RS02530 | -2 | 21 | 0.155619 | DUF805 domain-containing protein | |
| T303_RS02535 | 3 | 13 | 0.633921 | acid-activated urea channel | |
| T303_RS02540 | 3 | 13 | 0.474919 | urease subunit gamma | |
| T303_RS02545 | 5 | 17 | 0.337338 | urease subunit beta | |
| T303_RS02550 | 3 | 17 | 0.365244 | urease subunit alpha | |
| T303_RS02555 | 3 | 14 | -0.114305 | urease accessory protein UreE | |
| T303_RS02560 | 3 | 13 | 0.015735 | urease accessory protein UreF | |
| T303_RS02565 | -1 | 16 | -0.555852 | urease accessory protein UreG | |
| T303_RS02570 | -1 | 15 | -0.334596 | urease accessory protein UreD | |
| T303_RS02575 | -1 | 13 | -1.327806 | cobalt transporter CbiM | |
| T303_RS02580 | -1 | 20 | -4.569922 | cobalt ABC transporter permease | |
| T303_RS02585 | 0 | 21 | -5.183759 | cobalt ABC transporter ATP-binding protein | |
| T303_RS02590 | 0 | 24 | -6.385499 | amino acid ABC transporter substrate-binding | |
| T303_RS02595 | -1 | 24 | -6.824407 | peptide synthetase | |
| T303_RS02600 | -2 | 24 | -7.188592 | NUDIX hydrolase | |
| T303_RS02605 | -1 | 22 | -6.805385 | MFS transporter | |
| T303_RS02610 | -1 | 15 | -3.861163 | IS110 family transposase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02500 | FLGMRINGFLIF | 29 | 0.020 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02550 | SHAPEPROTEIN | 26 | 0.023 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02560 | UREASE | 993 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02615 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 6 | T303_RS03285 | T303_RS03395 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS03285 | 5 | 30 | 2.524218 | hypothetical protein | |
| T303_RS03290 | 4 | 23 | 2.577056 | PhoH family protein | |
| T303_RS03295 | 4 | 21 | 1.968806 | hypothetical protein | |
| T303_RS03300 | 6 | 24 | 1.566586 | hypothetical protein | |
| T303_RS03305 | 6 | 22 | 0.802703 | hypothetical protein | |
| T303_RS03310 | 1 | 18 | 0.395984 | methionine--tRNA ligase | |
| T303_RS03315 | 0 | 14 | 0.087399 | LysR family transcriptional regulator | |
| T303_RS03325 | 0 | 13 | -0.158313 | hypothetical protein | |
| T303_RS03330 | -1 | 12 | 0.306170 | competence protein CoiA | |
| T303_RS03335 | -1 | 12 | 0.857904 | oligoendopeptidase F | |
| T303_RS03340 | 0 | 10 | -0.014417 | methyltransferase | |
| T303_RS03345 | 0 | 16 | 1.004717 | protease | |
| T303_RS03355 | 2 | 22 | 1.518322 | alanine--tRNA ligase | |
| T303_RS03360 | 3 | 23 | 1.661206 | hypothetical protein | |
| T303_RS03365 | 4 | 25 | 2.189578 | lysozyme | |
| T303_RS03370 | 2 | 20 | 3.244180 | hypothetical protein | |
| T303_RS03375 | 1 | 21 | 4.060801 | cell wall protein | |
| T303_RS03380 | 0 | 18 | 3.160340 | hydrolase | |
| T303_RS03385 | 1 | 20 | 3.498814 | diaminopimelate aminotransferase | |
| T303_RS03390 | 2 | 22 | 3.226990 | N-acetyl-gamma-glutamyl-phosphate reductase | |
| T303_RS03395 | 2 | 20 | 3.124526 | arginine biosynthesis bifunctional protein ArgJ |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03310 | IGASERPTASE | 32 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03375 | GPOSANCHOR | 25 | 0.024 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03385 | GPOSANCHOR | 27 | 0.010 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 7 | T303_RS03445 | T303_RS03520 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS03445 | -1 | 20 | 3.603140 | hypothetical protein | |
| T303_RS03450 | -1 | 24 | 3.860241 | flavin reductase | |
| T303_RS03455 | 0 | 23 | 3.037866 | N-acetyltransferase | |
| T303_RS03460 | -1 | 22 | 2.575818 | valine--tRNA ligase | |
| T303_RS03465 | 1 | 24 | 1.898619 | F0F1 ATP synthase subunit C | |
| T303_RS03470 | 3 | 27 | 1.680400 | F0F1 ATP synthase subunit A | |
| T303_RS03475 | 2 | 22 | -0.896703 | ATP synthase subunit B | |
| T303_RS03480 | 3 | 23 | 0.191818 | ATP synthase subunit delta | |
| T303_RS03485 | 4 | 25 | 1.058009 | ATP synthase subunit alpha | |
| T303_RS03495 | 4 | 28 | 1.500716 | ATP synthase subunit gamma | |
| T303_RS03505 | 4 | 30 | 2.086563 | ATP synthase subunit beta | |
| T303_RS03510 | 3 | 23 | 1.085344 | ATP synthase epsilon chain | |
| T303_RS03515 | 1 | 20 | 0.786120 | cell division protein | |
| T303_RS03520 | 3 | 24 | 1.521325 | elongation factor Tu |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03470 | RTXTOXIND | 32 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03520 | TCRTETOQM | 79 | 6e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 8 | T303_RS03650 | T303_RS03910 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS03650 | 3 | 14 | -0.237293 | transposase | |
| T303_RS03655 | 3 | 16 | -0.010954 | hypothetical protein | |
| T303_RS03660 | 1 | 19 | -0.201047 | hypothetical protein | |
| T303_RS03665 | -2 | 24 | 1.460680 | hypothetical protein | |
| T303_RS03670 | 0 | 26 | 1.857749 | hypothetical protein | |
| T303_RS03675 | 1 | 25 | 2.240280 | LysR family transcriptional regulator | |
| T303_RS03680 | 1 | 24 | 2.341740 | signal peptidase II | |
| T303_RS03685 | 3 | 21 | 2.993071 | RNA pseudouridine synthase | |
| T303_RS03690 | 2 | 22 | 3.407875 | bifunctional protein PyrR | |
| T303_RS03695 | 2 | 21 | 2.395304 | uracil transporter | |
| T303_RS03700 | 1 | 18 | 2.427351 | aspartate carbamoyltransferase | |
| T303_RS03705 | 1 | 18 | 2.629016 | carbamoyl phosphate synthase small subunit | |
| T303_RS03710 | 1 | 19 | 2.610650 | carbamoyl-phosphate synthase large chain | |
| T303_RS03715 | 0 | 16 | 2.166062 | ISL3 family transposase | |
| T303_RS03720 | 0 | 23 | 0.501423 | SAM-dependent methyltransferase | |
| T303_RS03725 | 0 | 26 | 1.601058 | hypothetical protein | |
| T303_RS03730 | 3 | 22 | 1.704145 | ABC transporter substrate-binding protein | |
| T303_RS03735 | 7 | 28 | 1.417479 | macrolide ABC transporter | |
| T303_RS03740 | 6 | 26 | 0.883862 | hypothetical protein | |
| T303_RS03745 | 5 | 24 | 0.841526 | 50S ribosomal protein L10 | |
| T303_RS03750 | 5 | 23 | -0.638026 | 50S ribosomal protein L7/L12 | |
| T303_RS03755 | 2 | 20 | -2.766256 | hypothetical protein | |
| T303_RS03760 | 0 | 21 | -3.784691 | ISL3 family transposase | |
| T303_RS03765 | 2 | 23 | -3.621918 | peptide ABC transporter ATP-binding protein | |
| T303_RS03770 | 2 | 22 | -3.083132 | ABC transporter permease | |
| T303_RS03775 | 3 | 25 | -2.683573 | hypothetical protein | |
| T303_RS03780 | 2 | 17 | -0.880405 | hypothetical protein | |
| T303_RS03785 | 1 | 14 | 0.343971 | hypothetical protein | |
| T303_RS03790 | 0 | 14 | 1.278062 | YSIRK signal domain/LPXTG anchor domain surface | |
| T303_RS03795 | -1 | 12 | 1.758810 | multidrug ABC transporter ATP-binding protein | |
| T303_RS03800 | -2 | 10 | 0.382239 | multidrug ABC transporter ATPase | |
| T303_RS03805 | -2 | 11 | 0.066929 | tRNA preQ1(34) S-adenosylmethionine | |
| T303_RS03810 | -1 | 13 | -1.969017 | glucosamine-6-phosphate deaminase | |
| T303_RS03815 | 0 | 19 | -3.599977 | histidine kinase | |
| T303_RS03820 | 1 | 22 | -5.670508 | DNA-binding response regulator | |
| T303_RS03825 | 0 | 19 | -5.038111 | molybdopterin biosynthesis protein MoeB | |
| T303_RS03830 | 0 | 16 | -3.816197 | ABC transporter ATP-binding protein | |
| T303_RS03835 | 0 | 17 | -2.964459 | ABC transporter permease | |
| T303_RS03840 | -3 | 15 | -1.101116 | sulfurtransferase | |
| T303_RS03845 | -3 | 16 | 1.089119 | transcriptional regulator | |
| T303_RS03850 | -2 | 17 | 2.755272 | hypothetical protein | |
| T303_RS03855 | -1 | 23 | 2.901440 | phosphorylase | |
| T303_RS03860 | -2 | 22 | 2.741997 | membrane protein | |
| T303_RS03870 | -2 | 17 | 3.960028 | 16S rRNA pseudouridine(516) synthase | |
| T303_RS03875 | -2 | 15 | 2.294591 | peptidase M20 | |
| T303_RS03880 | -2 | 15 | 2.907966 | alanine dehydrogenase | |
| T303_RS03885 | -1 | 15 | 2.790256 | alanine dehydrogenase | |
| T303_RS03890 | 0 | 16 | 3.119131 | pyridine nucleotide-disulfide oxidoreductase | |
| T303_RS03895 | 0 | 17 | 3.488567 | hypothetical protein | |
| T303_RS03900 | -1 | 17 | 3.044456 | mevalonate kinase | |
| T303_RS03905 | -2 | 17 | 4.076473 | diphosphomevalonate decarboxylase | |
| T303_RS03910 | -2 | 17 | 3.432308 | phosphomevalonate kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03720 | PREPILNPTASE | 31 | 0.009 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03730 | RTXTOXIND | 31 | 5e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03795 | MICOLLPTASE | 27 | 0.033 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03800 | GPOSANCHOR | 47 | 4e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03810 | PF05272 | 38 | 1e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03825 | PF06580 | 46 | 1e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03830 | HTHFIS | 65 | 3e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 9 | T303_RS03975 | T303_RS04035 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS03975 | 3 | 21 | 2.968125 | hydrolase | |
| T303_RS03980 | 2 | 20 | 3.393919 | hypothetical protein | |
| T303_RS03985 | 1 | 19 | 3.224706 | hypothetical protein | |
| T303_RS03990 | 1 | 18 | 3.576495 | hemolysin III | |
| T303_RS03995 | -1 | 15 | 3.180290 | hypothetical protein | |
| T303_RS04000 | -2 | 14 | 2.920296 | hydroxymethylglutaryl-CoA reductase, | |
| T303_RS04005 | -1 | 15 | 2.415880 | hydroxymethylglutaryl-CoA synthase | |
| T303_RS04010 | -1 | 16 | 2.474721 | thymidylate synthase | |
| T303_RS04015 | -2 | 15 | 2.513209 | dihydrofolate reductase | |
| T303_RS04025 | -2 | 14 | 2.200817 | ATP-dependent Clp protease ATP-binding subunit | |
| T303_RS04030 | 1 | 14 | 2.138375 | GTP-binding protein | |
| T303_RS04035 | 1 | 15 | 3.064447 | amino acid permease |
| 10 | T303_RS04400 | T303_RS04430 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS04400 | 2 | 25 | -2.314957 | transposase | |
| T303_RS04405 | 4 | 27 | -2.048327 | transposase | |
| T303_RS04410 | 5 | 25 | -2.696852 | transposase | |
| T303_RS04420 | 2 | 25 | -3.187069 | hypothetical protein | |
| T303_RS04425 | 2 | 24 | -1.795596 | hypothetical protein | |
| T303_RS04430 | 3 | 24 | -1.200813 | hypothetical protein |
| 11 | T303_RS04480 | T303_RS04545 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS04480 | 0 | 17 | -4.196915 | SprT family protein | |
| T303_RS04485 | 0 | 16 | -3.406630 | membrane protein | |
| T303_RS04495 | 0 | 20 | 0.516571 | HPr kinase/phosphorylase | |
| T303_RS04500 | 1 | 21 | 1.423805 | prolipoprotein diacylglyceryl transferase | |
| T303_RS04505 | 2 | 21 | 1.955075 | chemotaxis protein | |
| T303_RS04510 | 1 | 23 | 4.023639 | hypothetical protein | |
| T303_RS04515 | 0 | 18 | 3.374649 | hypothetical protein | |
| T303_RS04520 | -1 | 14 | 2.894468 | peptidase U32 | |
| T303_RS04525 | -1 | 15 | 1.038422 | protease | |
| T303_RS04530 | 0 | 15 | 0.365197 | ISL3 family transposase | |
| T303_RS04540 | 0 | 19 | 1.327990 | hypothetical protein | |
| T303_RS04545 | 2 | 18 | 1.007295 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04570 | PREPILNPTASE | 31 | 0.009 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 12 | T303_RS04640 | T303_RS04705 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS04640 | 2 | 24 | 1.571512 | hypothetical protein | |
| T303_RS04645 | 3 | 22 | 1.690255 | hypothetical protein | |
| T303_RS04655 | -1 | 28 | 4.468749 | hypothetical protein | |
| T303_RS04665 | -1 | 23 | 0.698419 | hypothetical protein | |
| T303_RS04670 | -1 | 20 | -0.091990 | NTPase | |
| T303_RS04675 | -1 | 19 | -1.378265 | hypothetical protein | |
| T303_RS04680 | 0 | 20 | -3.056801 | type I restriction-modification system subunit | |
| T303_RS04690 | 5 | 26 | -7.458081 | membrane protein | |
| T303_RS04695 | 2 | 20 | -3.778225 | zinc metalloprotease HtpX | |
| T303_RS04700 | 2 | 21 | -3.159544 | membrane protein | |
| T303_RS04705 | 2 | 21 | -1.820580 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04690 | BACINVASINB | 29 | 0.003 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04750 | ADHESNFAMILY | 26 | 0.033 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 13 | T303_RS04770 | T303_RS04830 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS04770 | 3 | 20 | -0.201552 | GTP-binding protein TypA | |
| T303_RS04775 | 5 | 21 | -0.174799 | membrane protein | |
| T303_RS04780 | 3 | 19 | 0.055917 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |
| T303_RS04785 | 2 | 17 | -0.293941 | UDP-N-acetylglucosamine--N-acetylmuramyl- | |
| T303_RS04790 | 2 | 18 | -0.332158 | hypothetical protein | |
| T303_RS04795 | 1 | 16 | -1.562108 | cell division protein FtsQ | |
| T303_RS04800 | -1 | 16 | -2.277214 | cell division protein FtsA | |
| T303_RS04805 | -1 | 17 | -1.176980 | cell division protein FtsZ | |
| T303_RS04810 | -1 | 19 | -1.908344 | YggS family pyridoxal phosphate enzyme | |
| T303_RS09740 | 1 | 20 | -1.841022 | cell division protein SepF | |
| T303_RS04815 | 0 | 21 | -1.943873 | YggT family protein | |
| T303_RS04820 | 0 | 20 | -1.895438 | hypothetical protein | |
| T303_RS04825 | 2 | 23 | -2.970661 | cell division protein DivIVA | |
| T303_RS04830 | 1 | 23 | -3.288384 | isoleucine--tRNA ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04795 | TCRTETOQM | 185 | 8e-53 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04810 | PF05932 | 30 | 0.006 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04820 | SHAPEPROTEIN | 49 | 1e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04830 | ALARACEMASE | 29 | 0.013 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 14 | T303_RS04965 | T303_RS05045 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS04965 | -1 | 18 | -3.063318 | transposase | |
| T303_RS04970 | -2 | 19 | -2.342777 | hypothetical protein | |
| T303_RS04975 | -2 | 17 | -2.201313 | transposase | |
| T303_RS04980 | -2 | 17 | -1.840546 | calcium-translocating P-type ATPase, PMCA-type | |
| T303_RS04985 | -2 | 18 | -1.668720 | aminodeoxychorismate synthase, component I | |
| T303_RS04990 | -2 | 18 | -2.012264 | hypothetical protein | |
| T303_RS05000 | 3 | 19 | -1.580083 | hypothetical protein | |
| T303_RS05005 | 8 | 28 | -0.688385 | hypothetical protein | |
| T303_RS05010 | 8 | 29 | -1.072618 | DNA primase | |
| T303_RS05015 | 9 | 30 | -1.089081 | hypothetical protein | |
| T303_RS05025 | 9 | 32 | -0.023483 | hypothetical protein | |
| T303_RS05040 | 6 | 26 | -2.608891 | hypothetical protein | |
| T303_RS05045 | 6 | 25 | -3.262216 | hypothetical protein |
| 15 | T303_RS05360 | T303_RS05445 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS05360 | 2 | 19 | -0.115345 | serine acetyltransferase | |
| T303_RS05365 | 5 | 21 | 1.046488 | type I restriction endonuclease subunit S | |
| T303_RS05375 | 5 | 25 | 2.802599 | type I restriction endonuclease | |
| T303_RS05380 | 6 | 28 | 3.297216 | sugar transporter | |
| T303_RS05385 | 5 | 26 | 2.538145 | hypothetical protein | |
| T303_RS05390 | 4 | 27 | 1.465553 | restriction endonuclease subunit M | |
| T303_RS05395 | 2 | 22 | -1.301839 | protease PrsW | |
| T303_RS05400 | 1 | 23 | -2.690525 | zinc ABC transporter substrate-binding protein | |
| T303_RS05405 | 3 | 24 | -3.349993 | hypothetical protein | |
| T303_RS05410 | 2 | 20 | -2.448390 | hypothetical protein | |
| T303_RS05415 | 0 | 17 | -2.387926 | membrane protein | |
| T303_RS05420 | -1 | 17 | -3.197083 | N-acetylmuramidase | |
| T303_RS05430 | 2 | 16 | -2.823851 | LysR family transcriptional regulator | |
| T303_RS05435 | 2 | 14 | -2.655368 | glutamine--fructose-6-phosphate | |
| T303_RS05440 | 1 | 15 | -3.201102 | hypothetical protein | |
| T303_RS05445 | 1 | 15 | -3.188784 | amino acid ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05440 | adhesinb | 213 | 2e-67 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05460 | FLGFLGJ | 60 | 5e-13 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| 16 | T303_RS05630 | T303_RS05735 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS05630 | -2 | 17 | -3.541737 | TetR family transcriptional regulator | |
| T303_RS05635 | 0 | 20 | -4.908078 | cation transporter | |
| T303_RS05640 | 0 | 30 | -8.420113 | ferrochelatase | |
| T303_RS05645 | -2 | 21 | -5.491591 | Zn-dependent alcohol dehydrogenase | |
| T303_RS05650 | -2 | 17 | -4.407246 | alpha/beta hydrolase | |
| T303_RS05655 | -2 | 20 | -5.003330 | hypothetical protein | |
| T303_RS05660 | -3 | 18 | -3.342509 | hypothetical protein | |
| T303_RS05670 | -2 | 13 | -0.119867 | phosphorylase | |
| T303_RS05675 | 2 | 18 | -1.061161 | phosphoglycolate phosphatase | |
| T303_RS05680 | 3 | 22 | -0.918887 | hypothetical protein | |
| T303_RS05685 | 2 | 23 | 0.069094 | hypothetical protein | |
| T303_RS05690 | 3 | 21 | 0.169935 | hypothetical protein | |
| T303_RS05695 | 1 | 19 | 1.894721 | conjugal transfer protein TraX | |
| T303_RS05700 | 1 | 20 | 2.937185 | 4-methyl-5(B-hydroxyethyl)-thiazole | |
| T303_RS05705 | 0 | 19 | 2.516166 | dihydroorotate dehydrogenase | |
| T303_RS05715 | 1 | 18 | 1.208958 | dihydroorotate dehydrogenase B catalytic | |
| T303_RS05725 | 2 | 23 | -0.321095 | CRISPR-associated endonuclease Cas1 | |
| T303_RS05730 | 1 | 23 | -1.702148 | CRISPR-associated endonuclease Cas2 | |
| T303_RS05735 | 2 | 23 | -0.422475 | CRISPR-associated endoribonuclease Cas6 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05705 | HTHTETR | 59 | 3e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05745 | ICENUCLEATIN | 28 | 0.039 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05750 | FERRIBNDNGPP | 40 | 4e-08 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05765 | FbpA_PF05833 | 699 | 0.0 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05790 | BACYPHPHTASE | 30 | 0.018 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| 17 | T303_RS05795 | T303_RS05850 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS05795 | 2 | 16 | -2.608235 | hypothetical protein | |
| T303_RS05800 | 2 | 16 | -3.248257 | bifunctional metallophosphatase/5'-nucleotidase | |
| T303_RS05805 | 3 | 15 | -3.816787 | hypothetical protein | |
| T303_RS05810 | 3 | 17 | -3.219761 | hypothetical protein | |
| T303_RS05815 | 1 | 13 | -2.285004 | tRNA uridine-5-carboxymethylaminomethyl(34) | |
| T303_RS05825 | 0 | 14 | 0.083417 | sodium:alanine symporter family protein | |
| T303_RS05830 | 2 | 17 | 1.506485 | ATP-dependent DNA helicase PcrA | |
| T303_RS05835 | 3 | 20 | 2.855841 | O-acetylhomoserine | |
| T303_RS05840 | 3 | 20 | 1.887041 | haloacid dehalogenase | |
| T303_RS05845 | 3 | 20 | 1.613844 | hypothetical protein | |
| T303_RS05850 | 2 | 17 | 0.679747 | 2-Cys peroxiredoxin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05860 | BICOMPNTOXIN | 24 | 0.050 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| 18 | T303_RS06095 | T303_RS06170 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS06095 | 2 | 18 | 1.490568 | branched-chain alpha-keto acid dehydrogenase | |
| T303_RS09750 | 2 | 19 | 2.029281 | TPP-dependent acetoin dehydrogenase complex, E1 | |
| T303_RS06100 | 2 | 22 | 1.951107 | pyruvate dehydrogenase E1 subunit alpha | |
| T303_RS06105 | 1 | 24 | 2.627734 | type I-E CRISPR-associated endoribonuclease | |
| T303_RS06110 | -1 | 18 | 1.508538 | subtype I-E CRISPR-associated endonuclease Cas1 | |
| T303_RS06115 | -2 | 16 | 0.555263 | type I-E CRISPR-associated protein | |
| T303_RS06120 | -2 | 13 | -1.165301 | type I-E CRISPR-associated protein Cas5/CasD | |
| T303_RS06125 | -1 | 16 | -2.385215 | type I-E CRISPR-associated protein | |
| T303_RS06130 | 1 | 20 | -3.214455 | type I-E CRISPR-associated protein Cse2/CasB | |
| T303_RS06135 | 2 | 25 | -4.353325 | CRISPR-associated helicase/endonuclease Cas3 | |
| T303_RS06140 | 1 | 27 | -4.489447 | hypothetical protein | |
| T303_RS06145 | 0 | 30 | -4.921711 | dihydroorotase | |
| T303_RS06150 | 0 | 31 | -5.140146 | uracil-DNA glycosylase | |
| T303_RS06155 | 1 | 29 | -5.441667 | cation transporter | |
| T303_RS06165 | -1 | 21 | -3.876682 | patatin family protein | |
| T303_RS06170 | 0 | 20 | -3.324373 | transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS06185 | cloacin | 34 | 0.003 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS06190 | UREASE | 35 | 3e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 19 | T303_RS06255 | T303_RS06320 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS06255 | -1 | 19 | -5.049353 | tyrosine protein phosphatase | |
| T303_RS06260 | -1 | 21 | -4.634356 | LytR family transcriptional regulator | |
| T303_RS06270 | 3 | 30 | -6.959723 | purine-nucleoside phosphorylase | |
| T303_RS06275 | 5 | 32 | -7.763191 | purine-nucleoside phosphorylase | |
| T303_RS06280 | 6 | 34 | -7.909809 | phosphopentomutase | |
| T303_RS06285 | 5 | 36 | -9.133665 | ribose-5-phosphate isomerase | |
| T303_RS06295 | 2 | 34 | -10.128081 | hypothetical protein | |
| T303_RS06300 | 1 | 27 | -7.541716 | hypothetical protein | |
| T303_RS06305 | 0 | 25 | -6.704638 | uracil-DNA glycosylase | |
| T303_RS06310 | 0 | 23 | -5.174799 | dipeptidase PepV | |
| T303_RS06315 | 0 | 18 | -3.164446 | tautomerase | |
| T303_RS06320 | 0 | 17 | -3.251865 | N-acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS06415 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 20 | T303_RS07350 | T303_RS07440 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS07350 | 2 | 24 | 1.050016 | histidine kinase | |
| T303_RS07355 | 3 | 27 | 1.328113 | ABC transporter | |
| T303_RS07360 | 4 | 25 | 1.043955 | multidrug ABC transporter ATP-binding protein | |
| T303_RS07365 | 3 | 28 | 1.991693 | hypothetical protein | |
| T303_RS07370 | 1 | 27 | 2.168978 | hypothetical protein | |
| T303_RS07375 | 0 | 26 | 2.118117 | MFS transporter permease | |
| T303_RS07380 | -1 | 26 | 1.810036 | XRE family transcriptional regulator | |
| T303_RS07385 | -1 | 26 | 1.345553 | DNA mismatch repair protein MutT | |
| T303_RS07390 | -1 | 25 | 0.237628 | hypothetical protein | |
| T303_RS07395 | 0 | 23 | -4.644270 | hypothetical protein | |
| T303_RS07400 | 2 | 31 | -9.732342 | hypothetical protein | |
| T303_RS07405 | 4 | 36 | -11.992721 | hypothetical protein | |
| T303_RS07410 | 5 | 37 | -12.233817 | hypothetical protein | |
| T303_RS07415 | 5 | 38 | -12.729778 | Fe-S oxidoreductase | |
| T303_RS07420 | 6 | 36 | -12.191587 | peptide ABC transporter permease | |
| T303_RS07425 | 7 | 35 | -11.481153 | bacteriocin ABC transporter ATP-binding protein | |
| T303_RS07430 | 6 | 26 | -6.803583 | ATP-binding protein | |
| T303_RS07435 | 3 | 22 | -3.448770 | DNA-binding response regulator | |
| T303_RS07440 | 2 | 23 | -1.545631 | xanthine permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07390 | PF06580 | 38 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07395 | ABC2TRNSPORT | 28 | 0.030 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07400 | PF05272 | 35 | 2e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07445 | LIPPROTEIN48 | 28 | 0.033 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07450 | PF05272 | 27 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07485 | HTHFIS | 78 | 5e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 21 | T303_RS07590 | T303_RS07705 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS07590 | 2 | 20 | -1.116583 | threonine transporter RhtB | |
| T303_RS07600 | 1 | 19 | -1.793068 | hypothetical protein | |
| T303_RS07605 | 1 | 23 | -2.369218 | glycosyl transferase | |
| T303_RS07610 | 1 | 24 | -3.792269 | peptide ABC transporter ATP-binding protein | |
| T303_RS07615 | 1 | 24 | -4.274447 | hypothetical protein | |
| T303_RS07620 | 1 | 24 | -5.164108 | hypothetical protein | |
| T303_RS07625 | 1 | 30 | -7.495104 | sodium transporter | |
| T303_RS07630 | -1 | 16 | -2.502154 | SPASM domain-containing protein | |
| T303_RS07635 | -1 | 19 | -3.273557 | transporter | |
| T303_RS07640 | -1 | 18 | -3.368964 | MutR family transcriptional regulator | |
| T303_RS07645 | 0 | 18 | -2.987122 | transposase | |
| T303_RS07650 | 0 | 19 | -2.809267 | hypothetical protein | |
| T303_RS07660 | 2 | 31 | -7.992633 | ATP-dependent dsDNA exonuclease | |
| T303_RS07665 | 2 | 34 | -7.881243 | exonuclease sbcCD subunit D | |
| T303_RS07670 | 7 | 37 | -10.230433 | beta-galactosidase | |
| T303_RS07675 | 5 | 35 | -9.943108 | lactose permease | |
| T303_RS07680 | 3 | 34 | -9.729759 | galactose mutarotase | |
| T303_RS07685 | 2 | 32 | -9.110325 | UDP-glucose 4-epimerase GalE | |
| T303_RS07690 | 3 | 29 | -8.491327 | galactose-1-phosphate uridylyltransferase | |
| T303_RS07695 | 2 | 28 | -8.432268 | galactokinase | |
| T303_RS07700 | 2 | 20 | -2.013357 | transcriptional regulator | |
| T303_RS07705 | 2 | 20 | 0.200019 | transposase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07725 | GPOSANCHOR | 42 | 2e-05 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07745 | PF07675 | 29 | 0.029 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07750 | NUCEPIMERASE | 161 | 3e-49 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 22 | T303_RS07765 | T303_RS07800 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS07765 | 2 | 20 | 0.026581 | two-component sensor histidine kinase | |
| T303_RS07770 | 0 | 20 | 3.230396 | transporter | |
| T303_RS07775 | -1 | 21 | 3.069454 | serine/threonine protein kinase | |
| T303_RS07780 | 0 | 19 | 2.624514 | protein phosphatase | |
| T303_RS07785 | 1 | 18 | 3.266427 | 16S rRNA (cytosine(967)-C(5))-methyltransferase | |
| T303_RS07795 | 0 | 16 | 3.127156 | methionyl-tRNA formyltransferase | |
| T303_RS07800 | 0 | 16 | 3.062908 | primosomal protein N' |
| 23 | T303_RS08045 | T303_RS08120 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS08045 | 1 | 16 | -3.368278 | glycosyl transferase | |
| T303_RS08050 | 0 | 20 | -3.573884 | glycosyl transferase family 2 | |
| T303_RS08055 | -1 | 20 | -4.504397 | NAD(P)-dependent oxidoreductase | |
| T303_RS08060 | -2 | 21 | -4.652174 | hypothetical protein | |
| T303_RS08065 | -1 | 24 | -5.339804 | bactoprenol glucosyl transferase | |
| T303_RS08070 | 0 | 23 | -5.456322 | aromatic ring hydroxylase | |
| T303_RS08075 | 0 | 25 | -5.881159 | RNA polymerase sigma factor RpoD | |
| T303_RS08085 | -2 | 23 | -5.969538 | DNA primase | |
| T303_RS08090 | -1 | 26 | -6.437689 | histidine kinase | |
| T303_RS08095 | -3 | 19 | -4.181180 | 30S ribosomal protein S21 | |
| T303_RS08100 | -3 | 18 | -3.654566 | amino acid ABC transporter substrate-binding | |
| T303_RS08105 | -2 | 14 | -2.183250 | aminotransferase | |
| T303_RS08110 | -2 | 9 | -0.902145 | amino acid ABC transporter substrate-binding | |
| T303_RS08115 | -2 | 10 | -1.287465 | amino acid ABC transporter substrate-binding | |
| T303_RS08120 | 2 | 11 | 1.237606 | 7,8-dihydro-8-oxoguanine triphosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS08110 | NUCEPIMERASE | 65 | 3e-14 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS08140 | MECHCHANNEL | 36 | 1e-06 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS08150 | ADHESNFAMILY | 28 | 0.030 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 24 | T303_RS08235 | T303_RS08265 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS08235 | 2 | 26 | -3.813751 | phosphoserine phosphatase SerB | |
| T303_RS08240 | 0 | 24 | -5.075093 | septation ring formation regulator EzrA | |
| T303_RS08245 | 2 | 26 | -7.196661 | DNA gyrase subunit B | |
| T303_RS08250 | 3 | 28 | -7.319180 | DNA gyrase subunit B | |
| T303_RS08255 | 1 | 21 | -6.333695 | membrane protein | |
| T303_RS08260 | 0 | 14 | -4.214070 | murein hydrolase regulator LrgA | |
| T303_RS08265 | 0 | 14 | -3.751730 | *arsenate reductase family protein |
| 25 | T303_RS08570 | T303_RS08635 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS08570 | -2 | 18 | 3.203308 | copper-binding protein | |
| T303_RS08575 | -2 | 19 | 3.359932 | copper-translocating P-type ATPase | |
| T303_RS08580 | -1 | 19 | 4.509998 | uracil phosphoribosyltransferase | |
| T303_RS08585 | -1 | 18 | 4.761846 | tryptophan synthase subunit alpha | |
| T303_RS08590 | 0 | 18 | 4.689072 | tryptophan synthase subunit beta | |
| T303_RS08595 | 0 | 18 | 5.086805 | N-(5'-phosphoribosyl)anthranilate isomerase | |
| T303_RS08600 | 0 | 17 | 5.091691 | indole-3-glycerol-phosphate synthase | |
| T303_RS08605 | 0 | 18 | 4.827712 | anthranilate phosphoribosyltransferase | |
| T303_RS08610 | -1 | 18 | 4.569711 | glutamine amidotransferase | |
| T303_RS08615 | -2 | 17 | 4.100511 | anthranilate synthase component I | |
| T303_RS08620 | -1 | 18 | 4.242338 | chorismate mutase | |
| T303_RS08625 | -1 | 19 | 3.482540 | hypothetical protein | |
| T303_RS08635 | -1 | 18 | 3.126308 | ATPase |
| 26 | T303_RS08895 | T303_RS09085 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS08895 | -3 | 29 | 3.749821 | rRNA methyltransferase | |
| T303_RS08900 | -1 | 27 | 4.639195 | thioredoxin-disulfide reductase | |
| T303_RS08905 | -1 | 26 | 4.383873 | thioredoxin | |
| T303_RS08910 | 0 | 24 | 3.628551 | amino acid ABC transporter ATP-binding protein | |
| T303_RS08915 | 0 | 21 | 3.930769 | amino acid ABC transporter permease | |
| T303_RS08920 | 0 | 21 | 3.118065 | amino acid ABC transporter substrate-binding | |
| T303_RS08925 | 0 | 22 | 2.362355 | hypothetical protein | |
| T303_RS08930 | -3 | 19 | 1.934722 | DNA polymerase IV | |
| T303_RS08935 | 1 | 25 | 2.087647 | formate acetyltransferase | |
| T303_RS08940 | 0 | 23 | 1.709670 | carbonate dehydratase | |
| T303_RS08945 | 2 | 23 | 1.483242 | GNAT family acetyltransferase | |
| T303_RS08950 | 2 | 25 | 1.355093 | type I restriction endonuclease subunit S | |
| T303_RS08955 | 2 | 24 | 1.535909 | DNA topoisomerase IV (subunit C) | |
| T303_RS08965 | 0 | 24 | 1.969937 | iron export ABC transporter permease subunit | |
| T303_RS08970 | 4 | 29 | 3.271273 | spermidine/putrescine ABC transporter | |
| T303_RS08975 | 1 | 26 | 2.549170 | serine hydrolase | |
| T303_RS09760 | 0 | 23 | 2.240007 | peptidase | |
| T303_RS08985 | -2 | 17 | 2.618499 | CAAX protease family protein | |
| T303_RS08990 | -1 | 14 | 2.650408 | aquaporin | |
| T303_RS08995 | 1 | 17 | 1.861910 | Xaa-Pro dipeptidyl-peptidase | |
| T303_RS09000 | 0 | 16 | 2.181206 | hypothetical protein | |
| T303_RS09005 | 2 | 19 | 2.937298 | peptidase | |
| T303_RS09010 | 1 | 18 | 2.998225 | hypothetical protein | |
| T303_RS09015 | 1 | 18 | 2.268847 | thiol reductase thioredoxin | |
| T303_RS09020 | 0 | 17 | 0.472944 | transposase | |
| T303_RS09025 | 1 | 18 | 2.265719 | transposase | |
| T303_RS09030 | 2 | 18 | 1.388464 | hypothetical protein | |
| T303_RS09035 | 2 | 19 | 0.884699 | hypothetical protein | |
| T303_RS09040 | 3 | 20 | 0.895142 | hypothetical protein | |
| T303_RS09045 | 4 | 19 | 0.956980 | bacteriocin | |
| T303_RS09050 | 7 | 28 | 2.661015 | hypothetical protein | |
| T303_RS09055 | 2 | 25 | -0.304536 | bacteriocin | |
| T303_RS09065 | 3 | 22 | -2.822035 | DNA-binding response regulator | |
| T303_RS09070 | 3 | 23 | -2.504487 | histidine kinase | |
| T303_RS09075 | 2 | 18 | -2.112011 | bacteriocin leader domain-containing protein | |
| T303_RS09080 | 2 | 18 | -2.262782 | lactococcin A ABC transporter permease | |
| T303_RS09085 | 2 | 19 | -1.073608 | multidrug ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS08945 | adhesinb | 32 | 0.002 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS08970 | SACTRNSFRASE | 39 | 2e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS08990 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09020 | DHBDHDRGNASE | 29 | 0.004 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09050 | MECHCHANNEL | 25 | 0.029 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09100 | RTXTOXIND | 64 | 3e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 27 | T303_RS09250 | T303_RS09445 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS09250 | -1 | 16 | 3.458206 | L-asparaginase | |
| T303_RS09255 | -1 | 19 | 3.939561 | ATP-dependent DNA helicase RecG | |
| T303_RS09260 | -1 | 17 | 3.071621 | alanine racemase | |
| T303_RS09265 | -1 | 15 | 2.613741 | holo-ACP synthase | |
| T303_RS09270 | -1 | 14 | 2.111329 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
| T303_RS09275 | 2 | 15 | 1.367531 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
| T303_RS09280 | 2 | 15 | 0.872678 | preprotein translocase subunit SecA | |
| T303_RS09285 | 3 | 17 | 1.009426 | hypothetical protein | |
| T303_RS09290 | 3 | 25 | 1.773149 | mannose-6-phosphate isomerase | |
| T303_RS09295 | 2 | 27 | 1.881366 | fructokinase | |
| T303_RS09300 | 1 | 26 | 1.430470 | PTS beta-glucoside transporter subunit EIIBCA | |
| T303_RS09305 | 1 | 26 | 1.385785 | sucrose-6-phosphate hydrolase | |
| T303_RS09310 | 2 | 31 | 1.294031 | LacI family transcriptional regulator | |
| T303_RS09315 | 2 | 33 | 0.841711 | N utilization substance protein B homolog | |
| T303_RS09320 | 1 | 23 | 0.332770 | hypothetical protein | |
| T303_RS09325 | 2 | 17 | 0.160936 | elongation factor P | |
| T303_RS09330 | 3 | 17 | -0.402632 | hypothetical protein | |
| T303_RS09340 | 0 | 14 | -1.726355 | peptidase M24 family protein | |
| T303_RS09345 | -1 | 18 | -2.246680 | hypothetical protein | |
| T303_RS09350 | 0 | 18 | -3.796872 | ABC transporter ATP-binding protein | |
| T303_RS09355 | 0 | 20 | 0.481619 | ABC transporter ATP-binding protein | |
| T303_RS09360 | 1 | 17 | 1.070500 | hypothetical protein | |
| T303_RS09365 | 1 | 15 | 1.665146 | membrane protein | |
| T303_RS09370 | 0 | 17 | 1.603279 | excinuclease ABC subunit A | |
| T303_RS09375 | 0 | 18 | 1.827165 | magnesium transporter | |
| T303_RS09380 | 0 | 17 | 2.358236 | membrane protein | |
| T303_RS09385 | 2 | 31 | 0.291926 | hypothetical protein | |
| T303_RS09390 | 1 | 28 | -0.118944 | 30S ribosomal protein S18 | |
| T303_RS09395 | 2 | 24 | 0.623288 | single-stranded DNA-binding protein | |
| T303_RS09400 | 3 | 20 | 0.723088 | 30S ribosomal protein S6 | |
| T303_RS09405 | 1 | 19 | 0.748906 | hypothetical protein | |
| T303_RS09410 | 1 | 21 | 0.462064 | A/G-specific adenine glycosylase | |
| T303_RS09415 | 0 | 20 | 2.212299 | hypothetical protein | |
| T303_RS09420 | -2 | 21 | 3.475582 | hypothetical protein | |
| T303_RS09425 | -2 | 22 | 3.621153 | hypothetical protein | |
| T303_RS09430 | -2 | 22 | 3.563031 | DNA polymerase I | |
| T303_RS09435 | -2 | 22 | 3.714395 | endonuclease MutS2 | |
| T303_RS09440 | -2 | 23 | 3.704481 | colicin V production protein | |
| T303_RS09445 | -2 | 24 | 3.011663 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09275 | ALARACEMASE | 353 | e-123 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09295 | SECA | 1059 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09405 | cloacin | 32 | 0.001 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09445 | CHANLCOLICIN | 30 | 0.032 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 28 | T303_RS09505 | T303_RS09580 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS09505 | 2 | 18 | 0.060818 | type I glutamate--ammonia ligase | |
| T303_RS09510 | 2 | 19 | -1.598509 | MerR family transcriptional regulator | |
| T303_RS09515 | 1 | 27 | -0.824226 | membrane protein | |
| T303_RS09520 | 0 | 24 | -1.564523 | ISL3 family transposase | |
| T303_RS09525 | -1 | 26 | -1.732196 | transposase | |
| T303_RS09530 | 0 | 29 | -1.356943 | phosphoglycerate kinase | |
| T303_RS09535 | -2 | 24 | -1.617286 | transposase | |
| T303_RS09540 | -1 | 24 | -1.054563 | transposase | |
| T303_RS09545 | 2 | 24 | -2.385544 | ISL3 family transposase | |
| T303_RS09550 | 4 | 23 | -0.826181 | type I glyceraldehyde-3-phosphate dehydrogenase | |
| T303_RS09555 | 4 | 30 | 0.492774 | elongation factor G | |
| T303_RS09560 | 5 | 34 | 1.018423 | 30S ribosomal protein S7 | |
| T303_RS09565 | 7 | 39 | 1.697371 | 30S ribosomal protein S12 | |
| T303_RS09570 | 7 | 41 | 1.048181 | pur operon repressor | |
| T303_RS09575 | 6 | 35 | 1.040771 | 3'-5' exoribonuclease YhaM | |
| T303_RS09580 | 2 | 22 | 0.356341 | DNA polymerase V |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09580 | TCRTETOQM | 622 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS09605 | GPOSANCHOR | 32 | 0.007 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 29 | T303_RS01620 | T303_RS01645 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS01620 | -1 | 10 | 2.018435 | hypothetical protein | |
| T303_RS01625 | -2 | 11 | 2.623491 | hypothetical protein | |
| T303_RS01630 | -2 | 11 | 2.259398 | ATP-dependent Clp protease ATP-binding protein | |
| T303_RS01635 | -2 | 11 | 2.590706 | peptidase M15 | |
| T303_RS01640 | -2 | 12 | 2.223213 | polyribonucleotide nucleotidyltransferase | |
| T303_RS01645 | -2 | 11 | 2.022316 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01625 | ACRIFLAVINRP | 28 | 0.022 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01635 | HTHFIS | 44 | 2e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01645 | BLACTAMASEA | 37 | 6e-05 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01650 | PF01540 | 32 | 0.009 | Adhesin lipoprotein | |
>PF01540#Adhesin lipoprotein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01655 | MALTOSEBP | 33 | 0.001 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 30 | T303_RS01770 | T303_RS01805 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS01770 | 1 | 12 | 1.412573 | peptidoglycan hydrolase | |
| T303_RS01775 | 0 | 16 | 0.535568 | heat-inducible transcriptional repressor HrcA | |
| T303_RS01780 | -1 | 18 | 0.896535 | nucleotide exchange factor GrpE | |
| T303_RS01785 | -1 | 17 | 0.690320 | molecular chaperone DnaK | |
| T303_RS01790 | -1 | 14 | 0.944330 | chaperone DnaJ | |
| T303_RS09730 | 2 | 18 | 0.561006 | tRNA pseudouridine synthase A | |
| T303_RS01800 | 2 | 18 | 1.080923 | hydroxymethylpyrimidine/phosphomethylpyrimidine | |
| T303_RS01805 | 1 | 16 | 1.263833 | membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01805 | FLGFLGJ | 53 | 1e-10 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01815 | IGASERPTASE | 37 | 3e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01820 | SHAPEPROTEIN | 156 | 1e-44 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS01840 | SALSPVBPROT | 28 | 0.014 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| 31 | T303_RS02675 | T303_RS02715 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS02675 | -2 | 16 | -0.057145 | ribosomal RNA small subunit methyltransferase G | |
| T303_RS02680 | 0 | 12 | -1.000505 | DNA-binding protein | |
| T303_RS02685 | 1 | 13 | -0.780433 | DNA-binding response regulator | |
| T303_RS02690 | 0 | 12 | -0.659496 | two-component sensor histidine kinase | |
| T303_RS02700 | 2 | 14 | 1.001482 | NrdR family transcriptional regulator | |
| T303_RS02705 | 1 | 15 | 0.926770 | helicase DnaB | |
| T303_RS02710 | 0 | 16 | 1.478345 | primosomal protein DnaI | |
| T303_RS02715 | -2 | 15 | 1.393359 | GTPase Der |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02690 | PRPHPHLPASEC | 30 | 0.006 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02700 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02705 | PF06580 | 36 | 4e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS02725 | TCRTETOQM | 40 | 2e-05 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 32 | T303_RS03100 | T303_RS03125 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS03100 | -2 | 11 | 1.616024 | acetyl-CoA carboxylase subunit beta | |
| T303_RS03105 | -2 | 12 | 1.195207 | acetyl-CoA carboxylase carboxyltransferase | |
| T303_RS03110 | -1 | 11 | 0.972584 | S-ribosylhomocysteine lyase | |
| T303_RS03115 | -1 | 10 | 0.513263 | ribonuclease | |
| T303_RS03120 | 0 | 12 | 1.511765 | ISL3 family transposase | |
| T303_RS03125 | 1 | 14 | 1.859686 | DeoR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03105 | TYPE4SSCAGA | 29 | 0.022 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03115 | LUXSPROTEIN | 155 | 5e-51 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03125 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03135 | ARGREPRESSOR | 28 | 0.023 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| 33 | T303_RS03785 | T303_RS03820 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS03785 | 1 | 14 | 0.343971 | hypothetical protein | |
| T303_RS03790 | 0 | 14 | 1.278062 | YSIRK signal domain/LPXTG anchor domain surface | |
| T303_RS03795 | -1 | 12 | 1.758810 | multidrug ABC transporter ATP-binding protein | |
| T303_RS03800 | -2 | 10 | 0.382239 | multidrug ABC transporter ATPase | |
| T303_RS03805 | -2 | 11 | 0.066929 | tRNA preQ1(34) S-adenosylmethionine | |
| T303_RS03810 | -1 | 13 | -1.969017 | glucosamine-6-phosphate deaminase | |
| T303_RS03815 | 0 | 19 | -3.599977 | histidine kinase | |
| T303_RS03820 | 1 | 22 | -5.670508 | DNA-binding response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03795 | MICOLLPTASE | 27 | 0.033 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03800 | GPOSANCHOR | 47 | 4e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03810 | PF05272 | 38 | 1e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03825 | PF06580 | 46 | 1e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS03830 | HTHFIS | 65 | 3e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 34 | T303_RS04730 | T303_RS04800 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS04730 | -2 | 12 | -0.481793 | D-Ala-D-Ala carboxypeptidase | |
| T303_RS04740 | 0 | 17 | -1.097205 | DNA starvation/stationary phase protection | |
| T303_RS04745 | -2 | 17 | -1.891307 | transcriptional repressor | |
| T303_RS04755 | 0 | 19 | -1.770166 | hypothetical protein | |
| T303_RS04765 | 1 | 20 | -0.938520 | glucokinase | |
| T303_RS04770 | 3 | 20 | -0.201552 | GTP-binding protein TypA | |
| T303_RS04775 | 5 | 21 | -0.174799 | membrane protein | |
| T303_RS04780 | 3 | 19 | 0.055917 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |
| T303_RS04785 | 2 | 17 | -0.293941 | UDP-N-acetylglucosamine--N-acetylmuramyl- | |
| T303_RS04790 | 2 | 18 | -0.332158 | hypothetical protein | |
| T303_RS04795 | 1 | 16 | -1.562108 | cell division protein FtsQ | |
| T303_RS04800 | -1 | 16 | -2.277214 | cell division protein FtsA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04770 | BLACTAMASEA | 55 | 9e-11 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04775 | HELNAPAPROT | 146 | 2e-47 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04790 | PF03309 | 34 | 5e-04 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04795 | TCRTETOQM | 185 | 8e-53 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04810 | PF05932 | 30 | 0.006 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS04820 | SHAPEPROTEIN | 49 | 1e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 35 | T303_RS09745 | T303_RS05545 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS09745 | 1 | 32 | -1.627377 | ribosome biogenesis GTPase YlqF | |
| T303_RS05510 | 2 | 19 | 1.352757 | ribonuclease HII | |
| T303_RS05515 | 2 | 17 | 1.795374 | transcriptional regulator | |
| T303_RS05520 | 0 | 17 | 1.269533 | DNA processing protein DprA | |
| T303_RS05525 | 1 | 14 | 0.626826 | DNA topoisomerase I | |
| T303_RS05535 | 0 | 13 | 0.241049 | membrane protein | |
| T303_RS05540 | 0 | 14 | -1.085444 | DNA-binding response regulator | |
| T303_RS05545 | -1 | 13 | -1.365858 | two-component sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05570 | PF05272 | 29 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05580 | PF03309 | 38 | 2e-05 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05600 | HTHFIS | 76 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS05605 | PF06580 | 33 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 36 | T303_RS06430 | T303_RS06460 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS06430 | 0 | 20 | -1.515950 | GNAT family N-acetyltransferase | |
| T303_RS06435 | -1 | 16 | -2.096998 | sugar phosphate phosphatase | |
| T303_RS06440 | -1 | 16 | -1.959927 | UDP-N-acetylmuramoylpentapeptide-lysine | |
| T303_RS06445 | -2 | 14 | -2.334700 | metallohydrolase | |
| T303_RS06455 | -2 | 14 | -2.032928 | cell wall metabolism sensor histidine kinase | |
| T303_RS06460 | -2 | 15 | -2.207141 | DNA-binding response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS06520 | SACTRNSFRASE | 31 | 4e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS06530 | TRNSINTIMINR | 30 | 0.019 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS06545 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS06550 | HTHFIS | 99 | 3e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 37 | T303_RS07345 | T303_RS07360 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| T303_RS07345 | 1 | 20 | 1.129376 | DNA-binding response regulator | |
| T303_RS07350 | 2 | 24 | 1.050016 | histidine kinase | |
| T303_RS07355 | 3 | 27 | 1.328113 | ABC transporter | |
| T303_RS07360 | 4 | 25 | 1.043955 | multidrug ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07385 | HTHFIS | 74 | 1e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07390 | PF06580 | 38 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07395 | ABC2TRNSPORT | 28 | 0.030 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| T303_RS07400 | PF05272 | 35 | 2e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||