| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | GCF_000783935.2_00005 | GCF_000783935.2_00021 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00005 | -1 | 14 | 3.212474 | Xylulose kinase | |
| GCF_000783935.2_00006 | -1 | 19 | 2.924092 | Mannitol 2-dehydrogenase | |
| GCF_000783935.2_00007 | -1 | 18 | 2.894033 | Erythritol catabolism regulatory protein EryD | |
| GCF_000783935.2_00008 | -1 | 17 | 2.268898 | HTH-type transcriptional regulator GntR | |
| GCF_000783935.2_00009 | -1 | 18 | 2.419465 | Ribitol 2-dehydrogenase | |
| GCF_000783935.2_00010 | 0 | 16 | 3.039781 | Ribulokinase | |
| GCF_000783935.2_00011 | -1 | 16 | 2.007469 | Alpha-ketoglutarate permease | |
| GCF_000783935.2_00012 | 1 | 13 | 2.366242 | Fructose-bisphosphate aldolase class 1 | |
| GCF_000783935.2_00013 | 1 | 14 | 3.747564 | Putative nucleoside transporter YegT | |
| GCF_000783935.2_00014 | 1 | 16 | 4.886948 | ADP-ribosylarginine hydrolase Tri1 | |
| GCF_000783935.2_00015 | 1 | 19 | 5.079018 | Bifunctional ribokinase/ribose-5-phosphate | |
| GCF_000783935.2_00016 | 1 | 18 | 5.832001 | HTH-type transcriptional repressor NagR | |
| GCF_000783935.2_00017 | 0 | 16 | 6.312879 | Hydroxymethylpyrimidine/phosphomethylpyrimidine | |
| GCF_000783935.2_00018 | 0 | 16 | 5.900313 | Hydroxyethylthiazole kinase | |
| GCF_000783935.2_00019 | 0 | 14 | 4.970333 | hypothetical protein | |
| GCF_000783935.2_00020 | -1 | 14 | 4.734247 | Hydrogen peroxide-inducible genes activator | |
| GCF_000783935.2_00021 | 0 | 14 | 4.249058 | Adenine deaminase 2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 113 | 2e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 40 | 2e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 46 | 2e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | UREASE | 35 | 9e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 2 | GCF_000783935.2_00031 | GCF_000783935.2_00058 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00031 | 2 | 19 | 4.459879 | Sensor histidine kinase BtsS | |
| GCF_000783935.2_00032 | 3 | 19 | 4.987066 | HTH-type transcriptional regulator MlrA | |
| GCF_000783935.2_00033 | 0 | 17 | 4.362282 | hypothetical protein | |
| GCF_000783935.2_00034 | -1 | 16 | 3.846768 | Glycine betaine uptake system permease protein | |
| GCF_000783935.2_00035 | -2 | 17 | 3.547883 | Glycine betaine uptake system ATP-binding | |
| GCF_000783935.2_00036 | -2 | 16 | 3.149300 | Glycine betaine uptake system permease protein | |
| GCF_000783935.2_00037 | -2 | 17 | 1.904062 | Glycine betaine-binding protein YehZ | |
| GCF_000783935.2_00038 | -2 | 17 | 1.840209 | Beta-xylosidase | |
| GCF_000783935.2_00039 | 0 | 15 | 1.792537 | Quinone-dependent D-lactate dehydrogenase | |
| GCF_000783935.2_00040 | 2 | 15 | 2.138425 | Phosphinothricin N-acetyltransferase | |
| GCF_000783935.2_00041 | 2 | 16 | 1.233924 | D-alanyl-D-alanine endopeptidase | |
| GCF_000783935.2_00042 | 1 | 14 | 1.254546 | Inner membrane protein YohC | |
| GCF_000783935.2_00043 | 0 | 13 | 0.667385 | Inner membrane protein YohD | |
| GCF_000783935.2_00044 | -2 | 12 | 0.374112 | Antibiotic efflux pump outer membrane protein | |
| GCF_000783935.2_00045 | 0 | 12 | -2.017583 | Trans-aconitate 2-methyltransferase | |
| GCF_000783935.2_00046 | -1 | 13 | -2.967649 | 6-phospho-beta-glucosidase BglB | |
| GCF_000783935.2_00047 | 0 | 14 | -3.002850 | PTS system beta-glucoside-specific EIIBCA | |
| GCF_000783935.2_00048 | 0 | 16 | -3.684289 | Cryptic beta-glucoside bgl operon | |
| GCF_000783935.2_00049 | 1 | 17 | -3.641884 | Beta-xylosidase | |
| GCF_000783935.2_00050 | 1 | 16 | -4.043061 | Putative glycoside/cation symporter YagG | |
| GCF_000783935.2_00051 | -2 | 14 | -0.885815 | HTH-type transcriptional activator RhaR | |
| GCF_000783935.2_00052 | -1 | 10 | -0.238334 | Porin B | |
| GCF_000783935.2_00053 | 0 | 10 | -0.589574 | tRNA-dihydrouridine(16) synthase | |
| GCF_000783935.2_00054 | -1 | 13 | -3.708276 | hypothetical protein | |
| GCF_000783935.2_00055 | -1 | 12 | -3.631424 | Inner membrane protein YohK | |
| GCF_000783935.2_00056 | -2 | 12 | -3.180856 | Cytidine deaminase | |
| GCF_000783935.2_00057 | -2 | 13 | -3.067674 | hypothetical protein | |
| GCF_000783935.2_00058 | -2 | 13 | -3.283366 | Galactoside transport system permease protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 206 | 8e-64 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BLACTAMASEA | 36 | 1e-04 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 33 | 0.004 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 3 | GCF_000783935.2_00103 | GCF_000783935.2_00141 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00103 | -1 | 11 | 3.114498 | hypothetical protein | |
| GCF_000783935.2_00104 | -1 | 12 | 1.976720 | Magnesium transporter MgtE | |
| GCF_000783935.2_00105 | -2 | 11 | 0.447851 | ABC transporter ATP-binding/permease protein | |
| GCF_000783935.2_00106 | -2 | 12 | -0.625759 | Alpha-ketoglutarate-dependent dioxygenase AlkB | |
| GCF_000783935.2_00107 | -2 | 10 | -0.892513 | Bifunctional transcriptional activator/DNA | |
| GCF_000783935.2_00108 | 0 | 13 | -1.471705 | FAD:protein FMN transferase | |
| GCF_000783935.2_00109 | 0 | 13 | -1.803487 | Outer membrane porin C | |
| GCF_000783935.2_00110 | 0 | 13 | -1.317859 | Phosphotransferase RcsD | |
| GCF_000783935.2_00111 | 2 | 17 | -1.102649 | Transcriptional regulatory protein RcsB | |
| GCF_000783935.2_00112 | 2 | 17 | -0.798876 | Sensor histidine kinase RcsC | |
| GCF_000783935.2_00113 | 2 | 20 | -1.034491 | DNA gyrase subunit A | |
| GCF_000783935.2_00114 | 0 | 19 | -1.171020 | Ubiquinone biosynthesis O-methyltransferase | |
| GCF_000783935.2_00115 | 0 | 16 | 0.041758 | Ribonucleoside-diphosphate reductase 1 subunit | |
| GCF_000783935.2_00116 | -1 | 13 | 1.843753 | Ribonucleoside-diphosphate reductase 1 subunit | |
| GCF_000783935.2_00117 | -2 | 14 | 2.612722 | hypothetical protein | |
| GCF_000783935.2_00118 | -2 | 11 | 2.940140 | Glycerophosphodiester phosphodiesterase, | |
| GCF_000783935.2_00119 | -2 | 11 | 3.305204 | Glycerol-3-phosphate transporter | |
| GCF_000783935.2_00120 | -1 | 14 | 3.846928 | Anaerobic glycerol-3-phosphate dehydrogenase | |
| GCF_000783935.2_00121 | 0 | 12 | 3.949762 | Anaerobic glycerol-3-phosphate dehydrogenase | |
| GCF_000783935.2_00122 | 0 | 13 | 2.834909 | Anaerobic glycerol-3-phosphate dehydrogenase | |
| GCF_000783935.2_00123 | 0 | 15 | 2.360016 | Putative competence-damage inducible protein | |
| GCF_000783935.2_00124 | -1 | 14 | 1.979403 | hypothetical protein | |
| GCF_000783935.2_00125 | -1 | 15 | 2.405847 | Nucleoside triphosphatase NudI | |
| GCF_000783935.2_00126 | -3 | 15 | 2.852458 | Adaptive-response sensory-kinase SasA | |
| GCF_000783935.2_00127 | -2 | 12 | 3.355025 | Transcriptional regulatory protein tctD | |
| GCF_000783935.2_00128 | -2 | 10 | 4.162498 | hypothetical protein | |
| GCF_000783935.2_00129 | -1 | 10 | 4.227603 | hypothetical protein | |
| GCF_000783935.2_00130 | -1 | 11 | 4.731210 | hypothetical protein | |
| GCF_000783935.2_00131 | 0 | 11 | 5.137628 | hypothetical protein | |
| GCF_000783935.2_00132 | 2 | 12 | 5.437664 | 2-succinylbenzoate--CoA ligase | |
| GCF_000783935.2_00133 | 1 | 12 | 4.566683 | o-succinylbenzoate synthase | |
| GCF_000783935.2_00134 | 0 | 11 | 3.991388 | 1,4-dihydroxy-2-naphthoyl-CoA synthase | |
| GCF_000783935.2_00135 | 0 | 14 | 4.014073 | 2-succinyl-6-hydroxy-2, | |
| GCF_000783935.2_00136 | 0 | 15 | 3.007591 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- | |
| GCF_000783935.2_00137 | 1 | 16 | 2.122145 | Isochorismate synthase MenF | |
| GCF_000783935.2_00138 | 2 | 20 | 1.667234 | Protein ElaA | |
| GCF_000783935.2_00139 | 2 | 21 | 1.659780 | Ribonuclease BN | |
| GCF_000783935.2_00140 | 2 | 25 | 1.041227 | NADH-quinone oxidoreductase subunit N | |
| GCF_000783935.2_00141 | 2 | 24 | 0.489106 | NADH-quinone oxidoreductase subunit M |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ECOLIPORIN | 546 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 50 | 2e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 85 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 29 | 0.029 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 94 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | AUTOINDCRSYN | 29 | 0.009 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 4 | GCF_000783935.2_00212 | GCF_000783935.2_00231 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00212 | 2 | 14 | -1.878741 | Long-chain fatty acid transport protein | |
| GCF_000783935.2_00213 | 3 | 14 | -0.491352 | Intermembrane phospholipid transport system | |
| GCF_000783935.2_00214 | 2 | 13 | 0.136806 | Inner membrane protein YfdC | |
| GCF_000783935.2_00216 | 4 | 14 | 1.099320 | *hypothetical protein | |
| GCF_000783935.2_00217 | 5 | 12 | 1.392237 | hypothetical protein | |
| GCF_000783935.2_00218 | 5 | 12 | 0.654305 | hypothetical protein | |
| GCF_000783935.2_00219 | 4 | 12 | 0.605961 | hypothetical protein | |
| GCF_000783935.2_00220 | 4 | 19 | -1.918833 | hypothetical protein | |
| GCF_000783935.2_00221 | 4 | 26 | -3.636193 | hypothetical protein | |
| GCF_000783935.2_00222 | 4 | 22 | -3.871521 | hypothetical protein | |
| GCF_000783935.2_00223 | 4 | 20 | -3.851849 | hypothetical protein | |
| GCF_000783935.2_00224 | 3 | 18 | -3.812547 | hypothetical protein | |
| GCF_000783935.2_00225 | 3 | 16 | -2.254751 | hypothetical protein | |
| GCF_000783935.2_00226 | 5 | 13 | 0.282518 | hypothetical protein | |
| GCF_000783935.2_00227 | 6 | 12 | 1.798087 | hypothetical protein | |
| GCF_000783935.2_00228 | 6 | 13 | 1.453753 | Protein ClpV1 | |
| GCF_000783935.2_00229 | 5 | 13 | 0.104378 | Major exported protein | |
| GCF_000783935.2_00230 | 5 | 15 | 0.339671 | Peptidoglycan-associated lipoprotein | |
| GCF_000783935.2_00231 | 4 | 15 | -1.329512 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | VACJLIPOPROT | 378 | e-136 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | OMPADOMAIN | 97 | 7e-24 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 5 | GCF_000783935.2_00247 | GCF_000783935.2_00267 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00247 | 0 | 13 | -3.802490 | L-glyceraldehyde 3-phosphate reductase | |
| GCF_000783935.2_00248 | 0 | 15 | -4.608307 | hypothetical protein | |
| GCF_000783935.2_00249 | -1 | 14 | -4.722410 | Divalent metal cation transporter MntH | |
| GCF_000783935.2_00250 | -1 | 15 | -4.616460 | Nucleoside permease NupC | |
| GCF_000783935.2_00251 | -1 | 15 | -3.714528 | putative cyclic di-GMP phosphodiesterase PdeA | |
| GCF_000783935.2_00254 | 0 | 15 | -2.423109 | **hypothetical protein | |
| GCF_000783935.2_00255 | -1 | 13 | -1.410097 | hypothetical protein | |
| GCF_000783935.2_00256 | -1 | 12 | -1.076012 | Glutamate--tRNA ligase | |
| GCF_000783935.2_00261 | -1 | 13 | -0.476996 | ****HTH-type transcriptional regulator CynR | |
| GCF_000783935.2_00262 | -1 | 13 | -1.261156 | hypothetical protein | |
| GCF_000783935.2_00263 | -1 | 15 | -1.459424 | hypothetical protein | |
| GCF_000783935.2_00264 | 0 | 17 | -2.159812 | DNA ligase | |
| GCF_000783935.2_00265 | 1 | 22 | -3.875085 | Cell division protein ZipA | |
| GCF_000783935.2_00266 | 1 | 24 | -4.824088 | Sulfate transporter CysZ | |
| GCF_000783935.2_00267 | 1 | 23 | -3.921532 | Cysteine synthase A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FLAGELLIN | 33 | 0.003 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TONBPROTEIN | 41 | 3e-06 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 6 | GCF_000783935.2_00331 | GCF_000783935.2_00336 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00331 | -2 | 12 | 3.294860 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |
| GCF_000783935.2_00332 | -2 | 12 | 3.778223 | Cytoskeleton protein RodZ | |
| GCF_000783935.2_00333 | -2 | 13 | 3.620739 | Dual-specificity RNA methyltransferase RlmN | |
| GCF_000783935.2_00334 | -1 | 13 | 4.286674 | Nucleoside diphosphate kinase | |
| GCF_000783935.2_00335 | -2 | 14 | 4.222830 | Penicillin-binding protein 1C | |
| GCF_000783935.2_00336 | -1 | 14 | 3.001575 | Alpha-2-macroglobulin |
| 7 | GCF_000783935.2_00347 | GCF_000783935.2_00356 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00347 | 2 | 15 | -0.384087 | HTH-type transcriptional regulator IscR | |
| GCF_000783935.2_00348 | 3 | 13 | 0.495370 | tRNA (cytidine/uridine-2'-O-)-methyltransferase | |
| GCF_000783935.2_00349 | 2 | 15 | -0.216354 | Inositol-1-monophosphatase | |
| GCF_000783935.2_00350 | 2 | 18 | -0.896607 | hypothetical protein | |
| GCF_000783935.2_00351 | 2 | 22 | -2.799514 | hypothetical protein | |
| GCF_000783935.2_00352 | 2 | 24 | -3.454092 | hypothetical protein | |
| GCF_000783935.2_00353 | 3 | 25 | -3.956818 | putative 3-phenylpropionic acid transporter | |
| GCF_000783935.2_00354 | 2 | 26 | -4.805137 | putative protein YphB | |
| GCF_000783935.2_00355 | 2 | 22 | -4.284025 | D-xylose-proton symporter | |
| GCF_000783935.2_00356 | 1 | 21 | -4.296788 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 41 | 6e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SALSPVBPROT | 33 | 0.008 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| 8 | GCF_000783935.2_00412 | GCF_000783935.2_00421 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00412 | 1 | 21 | -3.392386 | 50S ribosomal protein L19 | |
| GCF_000783935.2_00413 | 1 | 15 | -2.458397 | tRNA (guanine-N(1)-)-methyltransferase | |
| GCF_000783935.2_00414 | 1 | 17 | -2.178509 | Ribosome maturation factor RimM | |
| GCF_000783935.2_00415 | 0 | 14 | -1.703407 | 30S ribosomal protein S16 | |
| GCF_000783935.2_00416 | 1 | 12 | -0.621517 | Signal recognition particle protein | |
| GCF_000783935.2_00417 | 2 | 11 | -1.189886 | Inner membrane protein YpjD | |
| GCF_000783935.2_00418 | 2 | 10 | -0.685734 | hypothetical protein | |
| GCF_000783935.2_00419 | 2 | 12 | -1.157308 | Protein GrpE | |
| GCF_000783935.2_00420 | 2 | 13 | -0.980720 | NAD kinase | |
| GCF_000783935.2_00421 | 3 | 12 | -0.652486 | DNA repair protein RecN |
| 9 | GCF_000783935.2_00521 | GCF_000783935.2_00557 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00521 | 2 | 14 | 2.743012 | PTS system glucitol/sorbitol-specific EIIA | |
| GCF_000783935.2_00522 | 0 | 15 | 2.214986 | Sorbitol-6-phosphate 2-dehydrogenase | |
| GCF_000783935.2_00523 | 0 | 16 | 2.995933 | hypothetical protein | |
| GCF_000783935.2_00524 | -1 | 17 | 3.391214 | Glucitol operon repressor | |
| GCF_000783935.2_00525 | -1 | 15 | 4.032324 | Arabinose 5-phosphate isomerase GutQ | |
| GCF_000783935.2_00526 | 0 | 16 | 5.157769 | Anaerobic nitric oxide reductase transcription | |
| GCF_000783935.2_00527 | 0 | 14 | 4.637331 | Anaerobic nitric oxide reductase | |
| GCF_000783935.2_00528 | 1 | 15 | 4.852863 | Nitric oxide reductase FlRd-NAD(+) reductase | |
| GCF_000783935.2_00529 | 1 | 14 | 4.556471 | hypothetical protein | |
| GCF_000783935.2_00530 | 0 | 15 | 3.420308 | High-affinity nickel transport protein | |
| GCF_000783935.2_00531 | 0 | 14 | 3.261710 | Carbamoyltransferase HypF | |
| GCF_000783935.2_00532 | 0 | 14 | 0.927846 | Hydrogenase-4 component A | |
| GCF_000783935.2_00533 | 1 | 15 | 1.329303 | HTH-type transcriptional regulator AscG | |
| GCF_000783935.2_00534 | 0 | 18 | 1.673876 | PTS system beta-glucoside-specific EIIBCA | |
| GCF_000783935.2_00535 | 0 | 21 | 1.683958 | Aryl-phospho-beta-D-glucosidase BglH | |
| GCF_000783935.2_00536 | -1 | 21 | 3.151973 | Hydrogenase 3 maturation protease | |
| GCF_000783935.2_00537 | -1 | 21 | 4.192202 | hypothetical protein | |
| GCF_000783935.2_00538 | -1 | 20 | 4.442695 | Formate hydrogenlyase subunit 7 | |
| GCF_000783935.2_00539 | 0 | 19 | 3.950457 | NAD(P)H-quinone oxidoreductase subunit I, | |
| GCF_000783935.2_00540 | 0 | 19 | 4.065912 | Formate hydrogenlyase subunit 5 | |
| GCF_000783935.2_00541 | 2 | 16 | 4.213614 | Formate hydrogenlyase subunit 4 | |
| GCF_000783935.2_00542 | 2 | 16 | 3.740573 | Hydrogenase-4 component B | |
| GCF_000783935.2_00543 | 2 | 15 | 2.552757 | Hydrogenase-4 component A | |
| GCF_000783935.2_00544 | 1 | 14 | 3.397381 | Formate hydrogenlyase regulatory protein HycA | |
| GCF_000783935.2_00545 | 1 | 14 | 3.170328 | Hydrogenase maturation factor HypA | |
| GCF_000783935.2_00546 | 0 | 15 | 3.270202 | Hydrogenase maturation factor HypB | |
| GCF_000783935.2_00547 | 0 | 16 | 3.131363 | Hydrogenase maturation factor HypC | |
| GCF_000783935.2_00548 | 0 | 16 | 3.386729 | Hydrogenase maturation factor HypD | |
| GCF_000783935.2_00549 | 0 | 18 | 3.122144 | Carbamoyl dehydratase HypE | |
| GCF_000783935.2_00550 | 0 | 17 | 2.044778 | Formate hydrogenlyase transcriptional activator | |
| GCF_000783935.2_00551 | -1 | 17 | 2.282284 | Molybdenum-pterin-binding protein MopA | |
| GCF_000783935.2_00552 | 0 | 17 | 1.987164 | putative periplasmic iron-binding protein | |
| GCF_000783935.2_00553 | 0 | 19 | 1.636440 | Manganese transport system ATP-binding protein | |
| GCF_000783935.2_00554 | -1 | 19 | 1.532402 | Manganese transport system membrane protein | |
| GCF_000783935.2_00555 | -1 | 17 | 1.869786 | Manganese transport system membrane protein | |
| GCF_000783935.2_00556 | 1 | 17 | 2.926146 | hypothetical protein | |
| GCF_000783935.2_00557 | 1 | 16 | 3.231734 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 86 | 4e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ARGREPRESSOR | 28 | 0.028 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 364 | e-123 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 30 | 0.008 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 381 | e-127 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ALARACEMASE | 27 | 0.039 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | adhesinb | 319 | e-111 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF07675 | 30 | 0.016 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| 10 | GCF_000783935.2_00609 | GCF_000783935.2_00617 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00609 | 0 | 20 | 4.105005 | L-serine dehydratase 2 | |
| GCF_000783935.2_00610 | -1 | 19 | 5.162605 | Putative aliphatic sulfonates-binding protein | |
| GCF_000783935.2_00611 | 0 | 20 | 5.153894 | Dibenzothiophene desulfurization enzyme C | |
| GCF_000783935.2_00612 | 0 | 19 | 6.076667 | Inner membrane metabolite transport protein | |
| GCF_000783935.2_00613 | -1 | 19 | 6.439792 | hypothetical protein | |
| GCF_000783935.2_00614 | -1 | 18 | 6.821204 | D-methionine transport system permease protein | |
| GCF_000783935.2_00615 | -2 | 17 | 6.741228 | Methionine import ATP-binding protein MetN | |
| GCF_000783935.2_00616 | -2 | 16 | 6.011852 | Dimethyl-sulfide monooxygenase | |
| GCF_000783935.2_00617 | -2 | 15 | 5.724969 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 42 | 4e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 11 | GCF_000783935.2_00686 | GCF_000783935.2_00709 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00686 | -1 | 14 | -4.200495 | HTH-type transcriptional regulator HdfR | |
| GCF_000783935.2_00687 | -1 | 18 | -6.904534 | hypothetical protein | |
| GCF_000783935.2_00688 | -1 | 19 | -7.023958 | Inner membrane transport protein YqeG | |
| GCF_000783935.2_00689 | -1 | 24 | -6.813463 | Pyridoxine 4-dehydrogenase | |
| GCF_000783935.2_00690 | 0 | 16 | -5.100967 | Flagellar brake protein YcgR | |
| GCF_000783935.2_00691 | 1 | 15 | -3.792668 | hypothetical protein | |
| GCF_000783935.2_00692 | 2 | 14 | -3.092261 | Cyclic di-GMP phosphodiesterase PdeH | |
| GCF_000783935.2_00693 | 2 | 12 | -1.149001 | hypothetical protein | |
| GCF_000783935.2_00694 | 3 | 13 | -0.714179 | Fimbria adhesin protein | |
| GCF_000783935.2_00695 | 1 | 12 | -0.208575 | Outer membrane usher protein YehB | |
| GCF_000783935.2_00696 | 3 | 19 | -0.657883 | putative fimbrial chaperone YadV | |
| GCF_000783935.2_00697 | 4 | 19 | 1.390281 | hypothetical protein | |
| GCF_000783935.2_00698 | 2 | 18 | 3.182294 | hypothetical protein | |
| GCF_000783935.2_00699 | 3 | 18 | 1.211677 | hypothetical protein | |
| GCF_000783935.2_00700 | 1 | 15 | 2.693366 | putative protein YqjZ | |
| GCF_000783935.2_00701 | -2 | 14 | 3.253685 | hypothetical protein | |
| GCF_000783935.2_00702 | -2 | 15 | 3.378691 | hypothetical protein | |
| GCF_000783935.2_00703 | 1 | 17 | 1.844934 | hypothetical protein | |
| GCF_000783935.2_00704 | 1 | 17 | 1.802208 | hypothetical protein | |
| GCF_000783935.2_00705 | 1 | 17 | 2.396733 | 2-amino-5-chloromuconic acid deaminase | |
| GCF_000783935.2_00706 | 1 | 19 | 2.101238 | Flavin-dependent monooxygenase, oxygenase | |
| GCF_000783935.2_00707 | 2 | 19 | 2.144155 | hypothetical protein | |
| GCF_000783935.2_00708 | 0 | 18 | 2.263449 | hypothetical protein | |
| GCF_000783935.2_00709 | -1 | 20 | 3.031549 | Anthranilate 1,2-dioxygenase large subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXINA | 30 | 0.020 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 660 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 12 | GCF_000783935.2_00720 | GCF_000783935.2_00736 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00720 | 1 | 19 | 3.207281 | Fimbrial subunit type 1 | |
| GCF_000783935.2_00721 | 2 | 20 | 3.195703 | putative major fimbrial subunit LpfA | |
| GCF_000783935.2_00722 | 1 | 20 | 3.174240 | Chaperone protein FimC | |
| GCF_000783935.2_00723 | 2 | 17 | 1.975782 | Outer membrane usher protein FimD | |
| GCF_000783935.2_00724 | 0 | 13 | 0.984069 | Protein FimF | |
| GCF_000783935.2_00725 | 0 | 14 | 0.197824 | Protein FimG | |
| GCF_000783935.2_00726 | 0 | 14 | -0.277404 | Type 1 fimbrin D-mannose specific adhesin | |
| GCF_000783935.2_00727 | 1 | 17 | -1.213326 | hypothetical protein | |
| GCF_000783935.2_00728 | -1 | 20 | -1.293358 | hypothetical protein | |
| GCF_000783935.2_00729 | -2 | 15 | 1.792651 | Enterobactin exporter EntS | |
| GCF_000783935.2_00730 | -2 | 14 | 2.238714 | putative protein YjdJ | |
| GCF_000783935.2_00731 | 1 | 13 | 3.960678 | hypothetical protein | |
| GCF_000783935.2_00732 | 0 | 12 | 3.799437 | hypothetical protein | |
| GCF_000783935.2_00733 | 0 | 12 | 4.052302 | Multidrug resistance protein MdtN | |
| GCF_000783935.2_00734 | 1 | 14 | 4.227950 | Multidrug resistance protein MdtO | |
| GCF_000783935.2_00735 | 1 | 12 | 3.663842 | Cation efflux system protein CusC | |
| GCF_000783935.2_00736 | 0 | 11 | 3.336577 | HTH-type transcriptional regulator MalT |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 987 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 49 | 2e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 26 | 0.026 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 69 | 6e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TYPE3IMSPROT | 30 | 0.033 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 13 | GCF_000783935.2_00780 | GCF_000783935.2_00799 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00780 | 2 | 24 | -3.717189 | Small-conductance mechanosensitive channel | |
| GCF_000783935.2_00781 | 1 | 23 | -3.381092 | Fructose-bisphosphate aldolase class 2 | |
| GCF_000783935.2_00782 | -1 | 21 | -4.301001 | Phosphoglycerate kinase | |
| GCF_000783935.2_00783 | 1 | 28 | -5.743211 | D-erythrose-4-phosphate dehydrogenase | |
| GCF_000783935.2_00784 | 1 | 32 | -6.917553 | Pantothenate kinase | |
| GCF_000783935.2_00785 | 0 | 19 | -4.311424 | Fumarase E | |
| GCF_000783935.2_00786 | 0 | 18 | -3.432491 | Fructose-1,6-bisphosphatase 2 class 2 | |
| GCF_000783935.2_00787 | -1 | 15 | -1.789553 | Mannitol-1-phosphate 5-dehydrogenase | |
| GCF_000783935.2_00788 | -1 | 14 | 0.762309 | PTS system mannitol-specific EIICB component | |
| GCF_000783935.2_00789 | -1 | 16 | 3.282132 | Mannitol-specific cryptic phosphotransferase | |
| GCF_000783935.2_00790 | -1 | 17 | 4.475804 | Transketolase 1 | |
| GCF_000783935.2_00791 | 1 | 14 | 5.148081 | Metalloprotease LoiP | |
| GCF_000783935.2_00792 | 0 | 17 | 5.173690 | Acetolactate synthase isozyme 1 large subunit | |
| GCF_000783935.2_00793 | 2 | 17 | 4.824568 | NAD/NADP-dependent betaine aldehyde | |
| GCF_000783935.2_00794 | 2 | 15 | 4.891869 | L-aspartate dehydrogenase | |
| GCF_000783935.2_00795 | 0 | 17 | 4.482277 | 7-alpha-hydroxysteroid dehydrogenase | |
| GCF_000783935.2_00796 | 0 | 18 | 4.111016 | 2-succinyl-6-hydroxy-2, | |
| GCF_000783935.2_00797 | -1 | 19 | 3.850843 | hypothetical protein | |
| GCF_000783935.2_00798 | -2 | 18 | 4.035481 | putative sulfoacetate transporter SauU | |
| GCF_000783935.2_00799 | -2 | 18 | 3.713645 | p-cumate 2,3-dioxygenase system, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SECA | 28 | 0.014 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 108 | 2e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06057 | 28 | 0.033 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 39 | 2e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 14 | GCF_000783935.2_00834 | GCF_000783935.2_00888 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00834 | 0 | 17 | 3.544105 | 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A | |
| GCF_000783935.2_00835 | 2 | 17 | 3.225586 | Apo-citrate lyase phosphoribosyl-dephospho-CoA | |
| GCF_000783935.2_00836 | 2 | 15 | 2.341626 | Citrate lyase alpha chain | |
| GCF_000783935.2_00837 | 1 | 13 | 1.348524 | Citrate lyase subunit beta | |
| GCF_000783935.2_00838 | 1 | 14 | 0.865544 | Citrate lyase acyl carrier protein | |
| GCF_000783935.2_00839 | -1 | 14 | 0.821485 | [Citrate [pro-3S]-lyase] ligase | |
| GCF_000783935.2_00840 | -1 | 14 | 0.369719 | hypothetical protein | |
| GCF_000783935.2_00841 | -1 | 10 | -1.290586 | Citrate/malate transporter | |
| GCF_000783935.2_00842 | -2 | 12 | -2.300715 | Sensor histidine kinase CitA | |
| GCF_000783935.2_00843 | -2 | 12 | -3.264205 | Transcriptional regulatory protein CitB | |
| GCF_000783935.2_00844 | -1 | 17 | -6.021717 | Constitutive ornithine decarboxylase | |
| GCF_000783935.2_00845 | 3 | 42 | -12.884764 | putative membrane protein YdfK | |
| GCF_000783935.2_00847 | 6 | 55 | -17.627965 | *Prophage integrase IntA | |
| GCF_000783935.2_00848 | 10 | 64 | -22.081566 | hypothetical protein | |
| GCF_000783935.2_00849 | 9 | 69 | -22.805504 | hypothetical protein | |
| GCF_000783935.2_00850 | 9 | 71 | -23.095431 | hypothetical protein | |
| GCF_000783935.2_00851 | 7 | 66 | -20.763329 | hypothetical protein | |
| GCF_000783935.2_00852 | 6 | 65 | -20.501580 | hypothetical protein | |
| GCF_000783935.2_00853 | 5 | 61 | -18.584844 | hypothetical protein | |
| GCF_000783935.2_00854 | 4 | 58 | -16.811198 | hypothetical protein | |
| GCF_000783935.2_00855 | 4 | 41 | -10.803657 | ATP-dependent zinc metalloprotease FtsH | |
| GCF_000783935.2_00856 | 3 | 32 | -6.328972 | hypothetical protein | |
| GCF_000783935.2_00857 | 3 | 32 | -6.933790 | hypothetical protein | |
| GCF_000783935.2_00858 | 2 | 31 | -6.985558 | hypothetical protein | |
| GCF_000783935.2_00859 | 2 | 33 | -7.045761 | hypothetical protein | |
| GCF_000783935.2_00860 | 2 | 35 | -8.775126 | hypothetical protein | |
| GCF_000783935.2_00861 | 2 | 36 | -9.558575 | hypothetical protein | |
| GCF_000783935.2_00862 | 1 | 36 | -11.222973 | RNA polymerase-associated protein RapA | |
| GCF_000783935.2_00863 | 1 | 40 | -11.985440 | hypothetical protein | |
| GCF_000783935.2_00864 | 4 | 46 | -13.448735 | hypothetical protein | |
| GCF_000783935.2_00865 | 4 | 25 | -9.016451 | Flagellar brake protein YcgR | |
| GCF_000783935.2_00866 | 4 | 19 | -6.869778 | hypothetical protein | |
| GCF_000783935.2_00867 | 5 | 19 | -6.014647 | Cyclic di-GMP phosphodiesterase PdeH | |
| GCF_000783935.2_00868 | 6 | 19 | -5.099039 | hypothetical protein | |
| GCF_000783935.2_00869 | 6 | 20 | -6.029486 | Fimbria adhesin protein | |
| GCF_000783935.2_00870 | 5 | 16 | -4.713015 | Outer membrane usher protein HtrE | |
| GCF_000783935.2_00871 | 4 | 42 | -13.059905 | putative fimbrial chaperone YadV | |
| GCF_000783935.2_00872 | 5 | 55 | -16.787526 | hypothetical protein | |
| GCF_000783935.2_00873 | 7 | 58 | -18.637959 | hypothetical protein | |
| GCF_000783935.2_00874 | 7 | 51 | -15.716150 | hypothetical protein | |
| GCF_000783935.2_00875 | 7 | 50 | -14.667189 | hypothetical protein | |
| GCF_000783935.2_00876 | 6 | 47 | -13.791061 | hypothetical protein | |
| GCF_000783935.2_00877 | 7 | 44 | -10.820388 | hypothetical protein | |
| GCF_000783935.2_00878 | 7 | 35 | -6.027525 | hypothetical protein | |
| GCF_000783935.2_00879 | 8 | 30 | -2.555411 | hypothetical protein | |
| GCF_000783935.2_00880 | 6 | 29 | -2.884443 | hypothetical protein | |
| GCF_000783935.2_00881 | 7 | 26 | -3.559993 | Antirestriction protein KlcA | |
| GCF_000783935.2_00882 | 7 | 28 | -4.552505 | hypothetical protein | |
| GCF_000783935.2_00883 | 5 | 24 | -5.407722 | hypothetical protein | |
| GCF_000783935.2_00884 | 6 | 24 | -5.228071 | Cytoskeleton bundling-enhancing antitoxin CbeA | |
| GCF_000783935.2_00885 | 4 | 22 | -5.708443 | Cytoskeleton-binding toxin CbtA | |
| GCF_000783935.2_00886 | 3 | 26 | -7.794266 | hypothetical protein | |
| GCF_000783935.2_00887 | 0 | 22 | -5.823243 | hypothetical protein | |
| GCF_000783935.2_00888 | 2 | 15 | -1.995867 | Oligo-1,6-glucosidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | LPSBIOSNTHSS | 40 | 3e-06 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 63 | 1e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SUBTILISIN | 43 | 3e-06 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 29 | 0.015 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 668 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 25 | 0.024 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CARBMTKINASE | 27 | 0.007 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 15 | GCF_000783935.2_00949 | GCF_000783935.2_00997 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00949 | 2 | 15 | 1.108255 | Putative acid--amine ligase YgiC | |
| GCF_000783935.2_00950 | 0 | 14 | 2.259642 | 4,5-DOPA dioxygenase extradiol | |
| GCF_000783935.2_00951 | 2 | 12 | 3.017934 | Zinc transporter ZupT | |
| GCF_000783935.2_00952 | 2 | 13 | 2.676528 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | |
| GCF_000783935.2_00953 | 2 | 13 | 2.317507 | Ubiquinone biosynthesis accessory factor UbiK | |
| GCF_000783935.2_00954 | 1 | 11 | 2.732315 | Surface composition regulator | |
| GCF_000783935.2_00955 | 0 | 11 | 2.264488 | Bifunctional protein HldE | |
| GCF_000783935.2_00956 | 0 | 10 | 1.732529 | Bifunctional glutamine synthetase | |
| GCF_000783935.2_00957 | -1 | 10 | 0.542907 | Inorganic triphosphatase | |
| GCF_000783935.2_00958 | -2 | 13 | 1.528241 | hypothetical protein | |
| GCF_000783935.2_00959 | -2 | 11 | 2.161355 | Multifunctional CCA protein | |
| GCF_000783935.2_00960 | -2 | 12 | 1.679561 | Undecaprenyl-diphosphatase | |
| GCF_000783935.2_00961 | -1 | 15 | 3.160385 | Dihydroneopterin aldolase | |
| GCF_000783935.2_00962 | -1 | 17 | 3.939251 | putative glycerol-3-phosphate acyltransferase | |
| GCF_000783935.2_00963 | 0 | 18 | 3.837904 | Major myo-inositol transporter IolT | |
| GCF_000783935.2_00964 | 0 | 18 | 3.843823 | Urease accessory protein UreD | |
| GCF_000783935.2_00965 | 2 | 20 | 3.762327 | Urease subunit gamma | |
| GCF_000783935.2_00966 | 1 | 18 | 3.304027 | Urease subunit beta | |
| GCF_000783935.2_00967 | 1 | 16 | 3.297504 | Urease subunit alpha | |
| GCF_000783935.2_00968 | -1 | 14 | 2.635142 | Urease accessory protein UreE | |
| GCF_000783935.2_00969 | -1 | 12 | 1.857478 | Urease accessory protein UreF | |
| GCF_000783935.2_00970 | 1 | 17 | 0.057672 | Urease accessory protein UreG | |
| GCF_000783935.2_00971 | 1 | 14 | -0.006581 | hypothetical protein | |
| GCF_000783935.2_00972 | 2 | 15 | -1.027920 | tRNA N6-adenosine threonylcarbamoyltransferase | |
| GCF_000783935.2_00973 | 1 | 11 | -0.948403 | 30S ribosomal protein S21 | |
| GCF_000783935.2_00974 | -1 | 10 | -0.580998 | DNA primase | |
| GCF_000783935.2_00975 | 0 | 11 | 0.046474 | RNA polymerase sigma factor RpoD | |
| GCF_000783935.2_00976 | -1 | 13 | 1.248252 | G/U mismatch-specific DNA glycosylase | |
| GCF_000783935.2_00978 | -1 | 12 | 1.987733 | *hypothetical protein | |
| GCF_000783935.2_00979 | -1 | 13 | 3.165276 | PTS-dependent dihydroxyacetone kinase operon | |
| GCF_000783935.2_00980 | -2 | 13 | 3.545113 | Glycerol dehydrogenase | |
| GCF_000783935.2_00981 | -1 | 13 | 3.732488 | PEP-dependent dihydroxyacetone kinase, | |
| GCF_000783935.2_00982 | -1 | 10 | 3.010844 | PEP-dependent dihydroxyacetone kinase, | |
| GCF_000783935.2_00983 | -1 | 9 | 2.051036 | PEP-dependent dihydroxyacetone kinase, | |
| GCF_000783935.2_00984 | 0 | 12 | 0.088462 | Dihydroxyacetone kinase | |
| GCF_000783935.2_00985 | 0 | 17 | -4.626046 | NADPH-dependent ferric-chelate reductase | |
| GCF_000783935.2_00986 | 0 | 21 | -6.030939 | Transcriptional regulator YqjI | |
| GCF_000783935.2_00987 | -1 | 20 | -5.201983 | Putrescine aminotransferase | |
| GCF_000783935.2_00988 | -1 | 18 | -5.053394 | Major exported protein | |
| GCF_000783935.2_00989 | 0 | 15 | -2.238729 | hypothetical protein | |
| GCF_000783935.2_00990 | 0 | 14 | 0.395775 | hypothetical protein | |
| GCF_000783935.2_00991 | -2 | 18 | 3.227471 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione | |
| GCF_000783935.2_00992 | -1 | 18 | 3.951435 | 3-hydroxy-5-phosphonooxypentane-2,4-dione | |
| GCF_000783935.2_00993 | 0 | 16 | 4.697298 | Autoinducer 2-binding protein LsrB | |
| GCF_000783935.2_00994 | 0 | 15 | 5.202084 | Autoinducer 2 import system permease protein | |
| GCF_000783935.2_00995 | -1 | 15 | 4.610533 | Autoinducer 2 import system permease protein | |
| GCF_000783935.2_00996 | -1 | 14 | 3.957225 | Autoinducer 2 import ATP-binding protein LsrA | |
| GCF_000783935.2_00997 | -3 | 13 | 3.128444 | Transcriptional regulator LsrR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | LPSBIOSNTHSS | 29 | 0.027 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 36 | 4e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | UREASE | 1080 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 251 | 3e-78 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ADHESNFAMILY | 28 | 0.037 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PHPHTRNFRASE | 159 | 3e-45 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 16 | GCF_000783935.2_01303 | GCF_000783935.2_01328 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01303 | 1 | 16 | 3.147284 | Ribosomal RNA small subunit methyltransferase D | |
| GCF_000783935.2_01304 | 1 | 15 | 2.474420 | hypothetical protein | |
| GCF_000783935.2_01305 | 1 | 15 | 2.587609 | hypothetical protein | |
| GCF_000783935.2_01306 | 1 | 12 | 3.141882 | hypothetical protein | |
| GCF_000783935.2_01307 | 0 | 11 | 2.940428 | Zinc/cadmium/lead-transporting P-type ATPase | |
| GCF_000783935.2_01308 | 1 | 12 | 1.196032 | Sulfur carrier protein TusA | |
| GCF_000783935.2_01309 | 1 | 11 | 1.257732 | Queuosine precursor transporter | |
| GCF_000783935.2_01310 | 1 | 14 | 1.671088 | hypothetical protein | |
| GCF_000783935.2_01311 | 0 | 15 | 1.542949 | putative MFS-type transporter YhhS | |
| GCF_000783935.2_01312 | 2 | 13 | 1.100147 | hypothetical protein | |
| GCF_000783935.2_01313 | 1 | 14 | 2.646939 | hypothetical protein | |
| GCF_000783935.2_01314 | 1 | 14 | 2.476484 | hypothetical protein | |
| GCF_000783935.2_01315 | 1 | 14 | 4.091461 | hypothetical protein | |
| GCF_000783935.2_01316 | 1 | 17 | 4.033965 | Acyl carrier protein | |
| GCF_000783935.2_01317 | 1 | 16 | 4.376832 | hypothetical protein | |
| GCF_000783935.2_01318 | 2 | 15 | 4.590980 | D-alanine--D-alanyl carrier protein ligase | |
| GCF_000783935.2_01319 | 3 | 17 | 4.743848 | hypothetical protein | |
| GCF_000783935.2_01320 | 3 | 16 | 5.460888 | hypothetical protein | |
| GCF_000783935.2_01321 | 3 | 18 | 5.085177 | hypothetical protein | |
| GCF_000783935.2_01322 | 4 | 16 | 5.193445 | Outer-membrane lipoprotein carrier protein | |
| GCF_000783935.2_01323 | 3 | 15 | 5.122398 | hypothetical protein | |
| GCF_000783935.2_01324 | 2 | 17 | 5.247647 | hypothetical protein | |
| GCF_000783935.2_01325 | 2 | 17 | 4.940197 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |
| GCF_000783935.2_01326 | 2 | 18 | 4.327023 | hypothetical protein | |
| GCF_000783935.2_01327 | 3 | 15 | 3.244049 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
| GCF_000783935.2_01328 | 2 | 13 | 3.147778 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF01206 | 102 | 1e-32 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 45 | 3e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 43 | 5e-06 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 97 | 2e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TETREPRESSOR | 31 | 0.008 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| 17 | GCF_000783935.2_01354 | GCF_000783935.2_01369 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01354 | -1 | 19 | -5.706531 | Ribosomal RNA large subunit methyltransferase J | |
| GCF_000783935.2_01355 | 1 | 22 | -7.105803 | Glutathione reductase | |
| GCF_000783935.2_01356 | 2 | 35 | -9.493880 | Galactitol 1-phosphate 5-dehydrogenase | |
| GCF_000783935.2_01357 | 1 | 35 | -9.412525 | HPr-like protein Crh | |
| GCF_000783935.2_01358 | 2 | 35 | -9.662300 | D-tagatose-1,6-bisphosphate aldolase subunit | |
| GCF_000783935.2_01359 | 3 | 36 | -9.932460 | Mannosyl-D-glycerate transport/metabolism system | |
| GCF_000783935.2_01360 | 2 | 28 | -7.330629 | D-arabitol-phosphate dehydrogenase | |
| GCF_000783935.2_01361 | 2 | 21 | -5.378465 | Xylulose kinase | |
| GCF_000783935.2_01362 | 0 | 14 | -2.960329 | PTS system galactitol-specific EIIC component | |
| GCF_000783935.2_01363 | 0 | 13 | -0.796012 | PTS system galactitol-specific EIIB component | |
| GCF_000783935.2_01364 | -1 | 13 | 0.110414 | hypothetical protein | |
| GCF_000783935.2_01365 | -1 | 13 | 2.591439 | Beta-lactamase | |
| GCF_000783935.2_01366 | 0 | 13 | 3.109603 | hypothetical protein | |
| GCF_000783935.2_01367 | 0 | 13 | 3.254215 | Sulfopropanediol 3-dehydrogenase | |
| GCF_000783935.2_01368 | 0 | 13 | 2.965028 | HTH-type transcriptional repressor CytR | |
| GCF_000783935.2_01369 | 0 | 13 | 3.090782 | Glutathione S-transferase GstB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FLGHOOKAP1 | 32 | 0.007 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SOPEPROTEIN | 25 | 0.038 | Salmonella type III secretion SopE effector protein ... | |
>SOPEPROTEIN#Salmonella type III secretion SopE effector protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | adhesinmafb | 30 | 0.010 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 18 | GCF_000783935.2_01410 | GCF_000783935.2_01423 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01410 | -1 | 12 | 3.307493 | Peptidyl-lysine N-acetyltransferase YiaC | |
| GCF_000783935.2_01411 | -1 | 11 | 2.520075 | Biotin sulfoxide reductase | |
| GCF_000783935.2_01412 | -1 | 14 | 2.108934 | putative lipoprotein YiaD | |
| GCF_000783935.2_01413 | 0 | 13 | 1.503339 | HTH-type transcriptional regulator KdgR | |
| GCF_000783935.2_01414 | -1 | 13 | 0.907335 | hypothetical protein | |
| GCF_000783935.2_01415 | 0 | 12 | -0.056836 | 2-dehydro-3-deoxygluconokinase | |
| GCF_000783935.2_01416 | 0 | 12 | -1.115933 | Putative tartrate transporter | |
| GCF_000783935.2_01417 | 2 | 9 | 0.738509 | Glyoxylate/hydroxypyruvate reductase B | |
| GCF_000783935.2_01418 | 2 | 11 | 0.316419 | hypothetical protein | |
| GCF_000783935.2_01419 | 1 | 13 | 0.363061 | 4-hydroxybenzoate transporter PcaK | |
| GCF_000783935.2_01420 | 3 | 14 | 0.769499 | hypothetical protein | |
| GCF_000783935.2_01421 | 2 | 18 | 1.262494 | Cold shock protein CspA | |
| GCF_000783935.2_01422 | 3 | 14 | 1.439350 | putative ABC transporter ATP-binding protein | |
| GCF_000783935.2_01423 | 2 | 18 | -0.138456 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 34 | 9e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | OMPADOMAIN | 114 | 2e-32 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 49 | 2e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ADHESNFAMILY | 30 | 0.018 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 19 | GCF_000783935.2_01531 | GCF_000783935.2_01556 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01531 | 0 | 15 | 3.050782 | Putative monooxygenase YcnE | |
| GCF_000783935.2_01532 | -1 | 15 | 2.398757 | Aldehyde reductase YahK | |
| GCF_000783935.2_01533 | -1 | 17 | 3.188017 | HTH-type transcriptional regulator CdhR | |
| GCF_000783935.2_01534 | -1 | 16 | 2.372195 | hypothetical protein | |
| GCF_000783935.2_01535 | 0 | 16 | 2.860598 | Methanol dehydrogenase activator | |
| GCF_000783935.2_01536 | 0 | 17 | 3.106171 | hypothetical protein | |
| GCF_000783935.2_01537 | 0 | 15 | 3.657799 | Lipoprotein 28 | |
| GCF_000783935.2_01538 | 1 | 16 | 4.493504 | HTH-type transcriptional regulator MtrA | |
| GCF_000783935.2_01539 | 1 | 15 | 3.588117 | hypothetical protein | |
| GCF_000783935.2_01540 | 1 | 15 | 3.667150 | hypothetical protein | |
| GCF_000783935.2_01541 | 1 | 14 | 3.197015 | hypothetical protein | |
| GCF_000783935.2_01542 | 0 | 12 | 3.161996 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_01543 | -1 | 15 | 2.798622 | Multidrug resistance protein 3 | |
| GCF_000783935.2_01544 | -2 | 15 | 3.186373 | hypothetical protein | |
| GCF_000783935.2_01545 | -2 | 17 | 3.261415 | Acetyltransferase | |
| GCF_000783935.2_01546 | -2 | 19 | 3.425159 | HTH-type transcriptional regulator BetI | |
| GCF_000783935.2_01547 | -3 | 18 | 3.563168 | Multidrug resistance protein MexA | |
| GCF_000783935.2_01548 | -2 | 18 | 3.656534 | Multidrug resistance protein MexB | |
| GCF_000783935.2_01549 | -2 | 16 | 3.419539 | Outer membrane protein OprM | |
| GCF_000783935.2_01550 | -2 | 14 | 3.087387 | Bicyclomycin resistance protein | |
| GCF_000783935.2_01551 | -2 | 13 | 3.828341 | N-acetylmuramic acid 6-phosphate etherase | |
| GCF_000783935.2_01552 | -2 | 14 | 4.203012 | PTS system N-acetylmuramic acid-specific EIIBC | |
| GCF_000783935.2_01553 | -1 | 15 | 4.434169 | putative inner membrane transporter YicL | |
| GCF_000783935.2_01554 | -2 | 14 | 4.675607 | hypothetical protein | |
| GCF_000783935.2_01555 | -1 | 14 | 4.441657 | hypothetical protein | |
| GCF_000783935.2_01556 | -1 | 13 | 3.983375 | 4-oxalomesaconate tautomerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 142 | 1e-39 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 74 | 1e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 38 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 54 | 3e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 44 | 4e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 1152 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 68 | 9e-15 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 20 | GCF_000783935.2_01634 | GCF_000783935.2_01646 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01634 | 2 | 25 | -3.134426 | Bifunctional protein GlmU | |
| GCF_000783935.2_01635 | 3 | 29 | -3.651508 | Pectate disaccharide-lyase | |
| GCF_000783935.2_01636 | 5 | 42 | -3.302140 | ATP synthase epsilon chain | |
| GCF_000783935.2_01637 | 5 | 44 | -3.271851 | ATP synthase subunit beta | |
| GCF_000783935.2_01638 | 5 | 37 | -3.916027 | ATP synthase gamma chain | |
| GCF_000783935.2_01639 | 6 | 38 | -4.065550 | ATP synthase subunit alpha | |
| GCF_000783935.2_01640 | 6 | 25 | -4.904817 | ATP synthase subunit delta | |
| GCF_000783935.2_01641 | 3 | 22 | -3.444409 | ATP synthase subunit b | |
| GCF_000783935.2_01642 | 3 | 20 | -3.284009 | ATP synthase subunit c | |
| GCF_000783935.2_01643 | 2 | 17 | -3.337753 | ATP synthase subunit a | |
| GCF_000783935.2_01644 | 1 | 16 | -2.290405 | ATP synthase protein I | |
| GCF_000783935.2_01645 | 2 | 14 | -1.138062 | Ribosomal RNA small subunit methyltransferase G | |
| GCF_000783935.2_01646 | 2 | 12 | -0.940662 | tRNA uridine 5-carboxymethylaminomethyl |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | IGASERPTASE | 27 | 0.029 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 21 | GCF_000783935.2_01658 | GCF_000783935.2_01705 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01658 | 0 | 19 | -3.247050 | Ribose operon repressor | |
| GCF_000783935.2_01659 | 0 | 23 | -4.340401 | putative transport protein HsrA | |
| GCF_000783935.2_01660 | 1 | 26 | -5.184077 | HTH-type transcriptional repressor NanR | |
| GCF_000783935.2_01665 | 0 | 27 | -5.573554 | *Molybdopterin-guanine dinucleotide biosynthesis | |
| GCF_000783935.2_01666 | -1 | 17 | -4.045035 | Molybdenum cofactor guanylyltransferase | |
| GCF_000783935.2_01667 | 0 | 15 | -4.012342 | Protein YihD | |
| GCF_000783935.2_01668 | 0 | 15 | -3.568845 | Stress response kinase A | |
| GCF_000783935.2_01669 | -1 | 12 | -3.298082 | Thiol:disulfide interchange protein DsbA | |
| GCF_000783935.2_01670 | -1 | 12 | -2.451930 | putative acyltransferase YihG | |
| GCF_000783935.2_01671 | -1 | 10 | -1.521765 | DNA polymerase I | |
| GCF_000783935.2_01672 | 0 | 15 | -1.287898 | putative GTP-binding protein EngB | |
| GCF_000783935.2_01673 | 1 | 23 | -1.824686 | Der GTPase-activating protein YihI | |
| GCF_000783935.2_01674 | 1 | 21 | -2.164173 | Oxygen-independent coproporphyrinogen III | |
| GCF_000783935.2_01675 | 1 | 23 | -3.081884 | DNA-binding transcriptional regulator NtrC | |
| GCF_000783935.2_01676 | 2 | 22 | -4.904912 | Sensory histidine kinase/phosphatase NtrB | |
| GCF_000783935.2_01677 | 2 | 23 | -6.076875 | Glutamine synthetase | |
| GCF_000783935.2_01678 | 1 | 26 | -6.803653 | GTP-binding protein TypA/BipA | |
| GCF_000783935.2_01679 | 0 | 33 | -7.116083 | Putative transcriptional regulator of | |
| GCF_000783935.2_01680 | 0 | 34 | -6.647764 | hypothetical protein | |
| GCF_000783935.2_01681 | 0 | 34 | -5.503385 | Inner membrane protein YihN | |
| GCF_000783935.2_01682 | 1 | 38 | -4.775097 | HTH-type transcriptional repressor CsqR | |
| GCF_000783935.2_01683 | 2 | 38 | -5.187999 | Sulfofructose kinase | |
| GCF_000783935.2_01684 | 3 | 38 | -5.409043 | 3-sulfolactaldehyde reductase | |
| GCF_000783935.2_01685 | 2 | 37 | -5.593986 | Sulfofructosephosphate aldolase | |
| GCF_000783935.2_01686 | 1 | 31 | -5.513741 | Starvation-sensing protein RspB | |
| GCF_000783935.2_01687 | 0 | 28 | -5.449296 | Inner membrane metabolite transport protein | |
| GCF_000783935.2_01688 | -1 | 21 | -4.226151 | Fosfomycin resistance protein AbaF | |
| GCF_000783935.2_01689 | -2 | 16 | -1.421717 | putative protein YphB | |
| GCF_000783935.2_01690 | -2 | 12 | -0.061739 | Alpha-D-glucose 1-phosphate phosphatase YihX | |
| GCF_000783935.2_01691 | -2 | 12 | -0.285710 | hypothetical protein | |
| GCF_000783935.2_01692 | -2 | 11 | 0.422250 | D-aminoacyl-tRNA deacylase | |
| GCF_000783935.2_01693 | -1 | 16 | 0.884347 | hypothetical protein | |
| GCF_000783935.2_01694 | -1 | 18 | 0.878911 | Acetyl esterase | |
| GCF_000783935.2_01695 | 0 | 20 | 0.828139 | Protein FdhE | |
| GCF_000783935.2_01696 | 2 | 20 | 0.647098 | Formate dehydrogenase, cytochrome b556(fdo) | |
| GCF_000783935.2_01697 | 2 | 15 | -0.981376 | Formate dehydrogenase-O iron-sulfur subunit | |
| GCF_000783935.2_01698 | 1 | 14 | -2.092610 | Formate dehydrogenase-O major subunit | |
| GCF_000783935.2_01699 | -1 | 19 | -4.819716 | Formate dehydrogenase-O major subunit | |
| GCF_000783935.2_01700 | 0 | 21 | -6.125822 | Sulfur carrier protein FdhD | |
| GCF_000783935.2_01701 | 1 | 25 | -8.430755 | hypothetical protein | |
| GCF_000783935.2_01702 | 2 | 25 | -8.457245 | Pyrophosphate--fructose 6-phosphate | |
| GCF_000783935.2_01703 | 1 | 20 | -6.253995 | hypothetical protein | |
| GCF_000783935.2_01704 | 1 | 19 | -5.110250 | Ascorbate-specific PTS system EIIC component | |
| GCF_000783935.2_01705 | 1 | 21 | -4.010329 | putative fructose-bisphosphate aldolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 136 | 1e-37 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SECA | 27 | 0.041 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 598 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETOQM | 179 | 9e-51 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CHANLCOLICIN | 34 | 0.001 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 38 | 5e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 32 | 0.004 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPH | 30 | 0.031 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| 22 | GCF_000783935.2_01947 | GCF_000783935.2_01960 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01947 | 1 | 13 | -3.972389 | Single-stranded DNA-binding protein | |
| GCF_000783935.2_01948 | 2 | 17 | -5.717700 | Membrane-bound lytic murein transglycosylase F | |
| GCF_000783935.2_01949 | 3 | 19 | -7.218586 | Ferrienterobactin receptor | |
| GCF_000783935.2_01950 | 3 | 30 | -11.253237 | Regulatory protein SoxS | |
| GCF_000783935.2_01951 | 2 | 27 | -10.237101 | Outer membrane protein assembly factor BamA | |
| GCF_000783935.2_01952 | 2 | 32 | -12.182251 | Anti-adapter protein IraM | |
| GCF_000783935.2_01953 | 0 | 19 | -6.319121 | hypothetical protein | |
| GCF_000783935.2_01954 | 0 | 13 | -4.409010 | hypothetical protein | |
| GCF_000783935.2_01955 | 0 | 12 | -3.176064 | hypothetical protein | |
| GCF_000783935.2_01956 | 0 | 12 | -1.912178 | Common pilus major fimbrillin subunit EcpA | |
| GCF_000783935.2_01957 | -1 | 14 | -2.365592 | putative fimbrial chaperone EcpB | |
| GCF_000783935.2_01958 | 0 | 14 | -2.394398 | putative outer membrane usher protein EcpC | |
| GCF_000783935.2_01959 | 0 | 16 | -3.157750 | Fimbria adhesin EcpD | |
| GCF_000783935.2_01960 | 2 | 19 | -2.017724 | putative fimbrial chaperone EcpE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 69 | 4e-14 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 23 | GCF_000783935.2_02011 | GCF_000783935.2_02021 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02011 | 2 | 25 | -1.869139 | hypothetical protein | |
| GCF_000783935.2_02012 | 1 | 23 | -1.563334 | hypothetical protein | |
| GCF_000783935.2_02013 | 1 | 26 | -3.719636 | putative fimbrial-like protein YfcP | |
| GCF_000783935.2_02014 | 1 | 25 | -4.004327 | hypothetical protein | |
| GCF_000783935.2_02015 | 1 | 26 | -4.842582 | putative major fimbrial subunit LpfA | |
| GCF_000783935.2_02016 | 2 | 27 | -5.943505 | Chaperone protein PapD | |
| GCF_000783935.2_02017 | 1 | 27 | -6.255314 | Outer membrane usher protein PapC | |
| GCF_000783935.2_02018 | 0 | 35 | -8.306563 | putative fimbrial-like protein YcbV | |
| GCF_000783935.2_02019 | -1 | 30 | -6.605532 | Major fimbrial subunit | |
| GCF_000783935.2_02020 | -1 | 27 | -5.903301 | hypothetical protein | |
| GCF_000783935.2_02021 | 0 | 23 | -4.546044 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 667 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 28 | 0.036 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 24 | GCF_000783935.2_02036 | GCF_000783935.2_02050 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02036 | 3 | 34 | -1.835093 | 10 kDa chaperonin | |
| GCF_000783935.2_02037 | 3 | 31 | -1.500340 | 60 kDa chaperonin | |
| GCF_000783935.2_02038 | 1 | 16 | -0.809349 | hypothetical protein | |
| GCF_000783935.2_02039 | 1 | 17 | -0.968067 | L-lysine 2,3-aminomutase | |
| GCF_000783935.2_02040 | 1 | 22 | -1.257896 | Elongation factor P | |
| GCF_000783935.2_02041 | 4 | 19 | -0.822962 | hypothetical protein | |
| GCF_000783935.2_02042 | 3 | 17 | -0.875528 | hypothetical protein | |
| GCF_000783935.2_02043 | 0 | 15 | 0.298857 | Guanidinium exporter | |
| GCF_000783935.2_02044 | -2 | 14 | 0.451422 | Outer membrane lipoprotein Blc | |
| GCF_000783935.2_02045 | 1 | 15 | 2.002752 | Fumarate reductase subunit D | |
| GCF_000783935.2_02046 | 1 | 14 | 1.918782 | Fumarate reductase subunit C | |
| GCF_000783935.2_02047 | 1 | 15 | 1.761788 | Fumarate reductase iron-sulfur subunit | |
| GCF_000783935.2_02048 | 1 | 15 | 1.818536 | Fumarate reductase flavoprotein subunit | |
| GCF_000783935.2_02049 | 2 | 16 | 1.626240 | Elongation factor P--(R)-beta-lysine ligase | |
| GCF_000783935.2_02050 | 2 | 14 | 1.422406 | Miniconductance mechanosensitive channel MscM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TYPE3OMOPROT | 27 | 0.008 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTLIPOCALIN | 264 | 1e-93 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | GPOSANCHOR | 49 | 7e-08 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 25 | GCF_000783935.2_02064 | GCF_000783935.2_02076 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02064 | 3 | 20 | -1.178258 | RNA-binding protein Hfq | |
| GCF_000783935.2_02065 | 2 | 18 | -1.365342 | GTPase HflX | |
| GCF_000783935.2_02066 | 3 | 19 | -0.347652 | Modulator of FtsH protease HflK | |
| GCF_000783935.2_02067 | 2 | 16 | 0.258259 | Modulator of FtsH protease HflC | |
| GCF_000783935.2_02068 | 0 | 14 | 1.615183 | hypothetical protein | |
| GCF_000783935.2_02069 | -1 | 14 | 1.655795 | Adenylosuccinate synthetase | |
| GCF_000783935.2_02070 | -1 | 14 | 2.459257 | HTH-type transcriptional repressor NsrR | |
| GCF_000783935.2_02071 | -1 | 16 | 3.402479 | Ribonuclease R | |
| GCF_000783935.2_02072 | 0 | 15 | 4.353674 | L-cysteate sulfo-lyase | |
| GCF_000783935.2_02073 | 1 | 16 | 4.425661 | Aspartate racemase | |
| GCF_000783935.2_02074 | 1 | 14 | 3.162516 | Taurine-binding periplasmic protein | |
| GCF_000783935.2_02075 | 0 | 14 | 3.672761 | Putative aliphatic sulfonates transport permease | |
| GCF_000783935.2_02076 | 0 | 14 | 3.292951 | Bicarbonate transport ATP-binding protein CmpD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | cloacin | 30 | 0.025 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 26 | GCF_000783935.2_02158 | GCF_000783935.2_02201 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02158 | 0 | 19 | -4.167344 | Inositol 2-dehydrogenase/D-chiro-inositol | |
| GCF_000783935.2_02159 | 0 | 17 | -3.821203 | hypothetical protein | |
| GCF_000783935.2_02160 | 0 | 15 | -2.613571 | Inosose dehydratase | |
| GCF_000783935.2_02161 | 0 | 15 | -1.766579 | Arginine utilization regulatory protein RocR | |
| GCF_000783935.2_02162 | 0 | 18 | 1.010174 | putative glutamate/gamma-aminobutyrate | |
| GCF_000783935.2_02163 | 1 | 25 | 3.876723 | Glutamyl-tRNA(Gln) amidotransferase subunit A, | |
| GCF_000783935.2_02164 | 2 | 38 | 5.261809 | sn-glycerol-3-phosphate-binding periplasmic | |
| GCF_000783935.2_02165 | 2 | 26 | 3.426539 | sn-glycerol-3-phosphate import ATP-binding | |
| GCF_000783935.2_02166 | 1 | 15 | -1.561227 | 3',5'-cyclic adenosine monophosphate | |
| GCF_000783935.2_02167 | 1 | 24 | -6.652750 | Lactose transport system permease protein LacG | |
| GCF_000783935.2_02168 | 2 | 37 | -9.630897 | sn-glycerol-3-phosphate transport system | |
| GCF_000783935.2_02169 | 2 | 44 | -11.155706 | Aldehyde reductase Ahr | |
| GCF_000783935.2_02171 | 4 | 52 | -12.631627 | *Prophage integrase IntA | |
| GCF_000783935.2_02172 | 5 | 55 | -13.266311 | hypothetical protein | |
| GCF_000783935.2_02173 | 5 | 51 | -11.606018 | hypothetical protein | |
| GCF_000783935.2_02174 | 5 | 51 | -11.141312 | hypothetical protein | |
| GCF_000783935.2_02175 | 5 | 47 | -10.319765 | hypothetical protein | |
| GCF_000783935.2_02176 | 5 | 47 | -10.126747 | hypothetical protein | |
| GCF_000783935.2_02177 | 5 | 44 | -9.961872 | RNA polymerase-associated protein RapA | |
| GCF_000783935.2_02178 | 1 | 21 | -4.473663 | hypothetical protein | |
| GCF_000783935.2_02179 | 0 | 18 | -2.287286 | hypothetical protein | |
| GCF_000783935.2_02180 | -1 | 18 | -0.303410 | hypothetical protein | |
| GCF_000783935.2_02181 | 0 | 20 | 1.917090 | Major exported protein | |
| GCF_000783935.2_02182 | 0 | 21 | 2.399429 | Toxic protein SymE | |
| GCF_000783935.2_02183 | 1 | 19 | 1.240679 | Myo-inositol 2-dehydrogenase | |
| GCF_000783935.2_02184 | 1 | 20 | -1.688901 | PTS system glucitol/sorbitol-specific EIIB | |
| GCF_000783935.2_02185 | 3 | 27 | -5.952337 | PTS system glucitol/sorbitol-specific EIIA | |
| GCF_000783935.2_02186 | 4 | 24 | -7.432948 | PTS system glucitol/sorbitol-specific EIIC | |
| GCF_000783935.2_02187 | 4 | 30 | -9.947756 | hypothetical protein | |
| GCF_000783935.2_02188 | 2 | 26 | -8.016990 | hypothetical protein | |
| GCF_000783935.2_02189 | 3 | 19 | -5.884357 | Major exported protein | |
| GCF_000783935.2_02190 | 2 | 18 | -4.443453 | hypothetical protein | |
| GCF_000783935.2_02191 | 2 | 18 | -4.343998 | Beta-xylosidase | |
| GCF_000783935.2_02192 | 2 | 20 | -3.839177 | Putative glycoside/cation symporter YagG | |
| GCF_000783935.2_02193 | 2 | 20 | -1.175650 | Xylose isomerase | |
| GCF_000783935.2_02194 | 2 | 19 | -0.369348 | Maltoporin | |
| GCF_000783935.2_02195 | 1 | 19 | -1.767623 | putative protein YjhP | |
| GCF_000783935.2_02196 | 2 | 26 | -5.462230 | hypothetical protein | |
| GCF_000783935.2_02197 | 0 | 24 | -5.504232 | hypothetical protein | |
| GCF_000783935.2_02198 | -1 | 19 | -3.289645 | hypothetical protein | |
| GCF_000783935.2_02199 | 0 | 13 | -3.861719 | hypothetical protein | |
| GCF_000783935.2_02200 | 0 | 12 | -3.982173 | Cold shock protein CspA | |
| GCF_000783935.2_02201 | -1 | 12 | -3.032068 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 350 | e-118 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | MALTOSEBP | 39 | 4e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 35 | 4e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 27 | GCF_000783935.2_02243 | GCF_000783935.2_02257 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02243 | 2 | 18 | 3.446652 | hypothetical protein | |
| GCF_000783935.2_02244 | 1 | 19 | 3.507673 | hypothetical protein | |
| GCF_000783935.2_02245 | 1 | 20 | 2.976386 | HTH-type transcriptional regulator BetI | |
| GCF_000783935.2_02246 | -1 | 17 | 3.323848 | Glutathione-regulated potassium-efflux system | |
| GCF_000783935.2_02247 | -1 | 17 | 2.725128 | HTH-type transcriptional regulator SyrM 1 | |
| GCF_000783935.2_02248 | 0 | 17 | 1.414499 | Glutathione transferase FosA | |
| GCF_000783935.2_02249 | 0 | 16 | 1.087650 | hypothetical protein | |
| GCF_000783935.2_02250 | 2 | 18 | 1.305936 | hypothetical protein | |
| GCF_000783935.2_02251 | 2 | 19 | 1.682799 | HTH-type transcriptional regulator NorG | |
| GCF_000783935.2_02252 | 0 | 18 | 1.789327 | hypothetical protein | |
| GCF_000783935.2_02253 | 0 | 16 | 1.778221 | Transcriptional regulator SlyA | |
| GCF_000783935.2_02254 | -1 | 15 | 1.384350 | Inner membrane protein YibH | |
| GCF_000783935.2_02255 | 0 | 14 | -0.312519 | hypothetical protein | |
| GCF_000783935.2_02256 | 2 | 14 | -0.555411 | hypothetical protein | |
| GCF_000783935.2_02257 | 2 | 14 | -0.240369 | 2-hydroxyisocaproyl-CoA dehydratase activator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 71 | 8e-16 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 28 | GCF_000783935.2_02280 | GCF_000783935.2_02291 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02280 | 0 | 23 | 4.165719 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | |
| GCF_000783935.2_02281 | 0 | 21 | 5.154788 | NAD/NADP-dependent betaine aldehyde | |
| GCF_000783935.2_02282 | 0 | 20 | 6.528968 | Homoprotocatechuate catabolism bifunctional | |
| GCF_000783935.2_02283 | 1 | 20 | 6.933330 | Homoprotocatechuate catabolism bifunctional | |
| GCF_000783935.2_02284 | 1 | 17 | 6.490647 | HTH-type transcriptional regulator FarR | |
| GCF_000783935.2_02285 | 0 | 17 | 6.441938 | Hydrogen cyanide synthase subunit HcnB | |
| GCF_000783935.2_02286 | -1 | 15 | 6.797458 | hypothetical protein | |
| GCF_000783935.2_02287 | -2 | 14 | 5.433996 | Glycine oxidase | |
| GCF_000783935.2_02288 | -2 | 16 | 5.155434 | 4-hydroxyproline 2-epimerase | |
| GCF_000783935.2_02289 | -1 | 18 | 5.032703 | HTH-type transcriptional activator RhaS | |
| GCF_000783935.2_02290 | -1 | 18 | 5.334249 | putative DapA-like lyase | |
| GCF_000783935.2_02291 | 0 | 15 | 3.673284 | Alpha-ketoglutaric semialdehyde dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FLGMOTORFLIM | 31 | 0.004 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| 29 | GCF_000783935.2_02302 | GCF_000783935.2_02315 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02302 | -2 | 25 | -3.759962 | p-hydroxybenzoate hydroxylase | |
| GCF_000783935.2_02303 | -2 | 20 | -4.572947 | HTH-type transcriptional activator RhaS | |
| GCF_000783935.2_02304 | -1 | 19 | -3.871640 | Putative transcription factor YjjQ | |
| GCF_000783935.2_02305 | 0 | 17 | -4.243852 | Transcriptional activator protein BglJ | |
| GCF_000783935.2_02306 | 2 | 17 | -3.865772 | hypothetical protein | |
| GCF_000783935.2_02307 | 0 | 15 | -2.829685 | hypothetical protein | |
| GCF_000783935.2_02308 | 0 | 14 | -2.124736 | Lichenan permease IIC component | |
| GCF_000783935.2_02309 | 1 | 18 | -2.011992 | Ferric iron reductase protein FhuF | |
| GCF_000783935.2_02310 | 0 | 19 | -2.335418 | hypothetical protein | |
| GCF_000783935.2_02311 | 1 | 15 | -0.930583 | hypothetical protein | |
| GCF_000783935.2_02315 | 2 | 14 | -0.910225 | ***Ribosomal RNA small subunit methyltransferase C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF08280 | 30 | 0.012 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | 2FE2SRDCTASE | 383 | e-138 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| 30 | GCF_000783935.2_02373 | GCF_000783935.2_02378 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02373 | 2 | 16 | 1.385511 | hypothetical protein | |
| GCF_000783935.2_02374 | 2 | 17 | 1.162673 | hypothetical protein | |
| GCF_000783935.2_02375 | 2 | 20 | 0.648762 | Maltose regulon regulatory protein MalI | |
| GCF_000783935.2_02376 | 2 | 22 | 0.640277 | 4-hydroxy-tetrahydrodipicolinate reductase | |
| GCF_000783935.2_02377 | 2 | 22 | 0.103764 | Carbamoyl-phosphate synthase small chain | |
| GCF_000783935.2_02378 | 2 | 18 | 0.006723 | Carbamoyl-phosphate synthase large chain |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 32 | 0.017 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 31 | GCF_000783935.2_02447 | GCF_000783935.2_02458 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02447 | 2 | 14 | 1.158071 | Type II secretion system protein F | |
| GCF_000783935.2_02448 | -1 | 12 | 1.258758 | putative type II secretion system protein HxcR | |
| GCF_000783935.2_02449 | 0 | 12 | -0.078084 | hypothetical protein | |
| GCF_000783935.2_02450 | 1 | 11 | -0.273570 | Nicotinate-nucleotide pyrophosphorylase | |
| GCF_000783935.2_02451 | 0 | 8 | -0.466132 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | |
| GCF_000783935.2_02452 | 1 | 18 | -1.234420 | Protein AmpE | |
| GCF_000783935.2_02453 | 1 | 25 | -1.503979 | Extracellular | |
| GCF_000783935.2_02454 | 2 | 32 | -1.889213 | Inner membrane symporter YicJ | |
| GCF_000783935.2_02455 | 2 | 34 | -1.656951 | Aromatic amino acid transport protein AroP | |
| GCF_000783935.2_02456 | 4 | 34 | -1.690725 | Pyruvate dehydrogenase complex repressor | |
| GCF_000783935.2_02457 | 3 | 31 | -0.400753 | Pyruvate dehydrogenase E1 component | |
| GCF_000783935.2_02458 | 2 | 26 | 0.704644 | Dihydrolipoyllysine-residue acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPF | 233 | 2e-75 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPG | 49 | 2e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 32 | GCF_000783935.2_02475 | GCF_000783935.2_02501 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02475 | -1 | 12 | -3.782135 | Carbonic anhydrase 2 | |
| GCF_000783935.2_02476 | -1 | 15 | -4.813676 | putative ABC transporter ATP-binding protein | |
| GCF_000783935.2_02477 | 1 | 19 | -6.466291 | Inner membrane transport permease YadH | |
| GCF_000783935.2_02478 | 1 | 25 | -7.324200 | hypothetical protein | |
| GCF_000783935.2_02479 | 4 | 31 | -9.283727 | hypothetical protein | |
| GCF_000783935.2_02480 | 4 | 47 | -12.905522 | Major exported protein | |
| GCF_000783935.2_02481 | 3 | 31 | -7.071564 | hypothetical protein | |
| GCF_000783935.2_02482 | 2 | 20 | -3.052727 | hypothetical protein | |
| GCF_000783935.2_02483 | 0 | 18 | -0.139362 | Aspartate 1-decarboxylase | |
| GCF_000783935.2_02484 | 0 | 17 | 0.524986 | hypothetical protein | |
| GCF_000783935.2_02485 | -1 | 17 | 1.869300 | Aspartate 1-decarboxylase | |
| GCF_000783935.2_02486 | -1 | 16 | 1.660118 | Pantothenate synthetase | |
| GCF_000783935.2_02487 | -1 | 12 | 0.739884 | 3-methyl-2-oxobutanoate | |
| GCF_000783935.2_02488 | 0 | 12 | 1.056766 | 2-amino-4-hydroxy-6- | |
| GCF_000783935.2_02489 | 1 | 9 | 3.442678 | Poly(A) polymerase I | |
| GCF_000783935.2_02490 | 1 | 11 | 3.914928 | Glutamyl-Q tRNA(Asp) synthetase | |
| GCF_000783935.2_02491 | 1 | 12 | 4.985313 | RNA polymerase-binding transcription factor | |
| GCF_000783935.2_02492 | 1 | 14 | 6.049569 | Sugar fermentation stimulation protein A | |
| GCF_000783935.2_02493 | 3 | 15 | 7.966621 | RNA 2',3'-cyclic phosphodiesterase | |
| GCF_000783935.2_02494 | 3 | 15 | 7.680759 | ATP-dependent RNA helicase HrpB | |
| GCF_000783935.2_02495 | 3 | 21 | 7.107001 | Type 4 prepilin-like proteins leader | |
| GCF_000783935.2_02496 | 3 | 22 | 7.576647 | Type II secretion system protein N | |
| GCF_000783935.2_02497 | 3 | 19 | 7.005858 | Type II secretion system protein M | |
| GCF_000783935.2_02498 | 2 | 18 | 6.201359 | Type II secretion system protein L | |
| GCF_000783935.2_02499 | 5 | 21 | 5.627749 | Putative type II secretion system protein K | |
| GCF_000783935.2_02500 | 5 | 20 | 5.732740 | Type II secretion system protein J | |
| GCF_000783935.2_02501 | 0 | 19 | 3.956337 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ABC2TRNSPORT | 68 | 2e-15 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PREPILNPTASE | 280 | 4e-97 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPH | 28 | 0.030 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPG | 29 | 0.006 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPG | 31 | 7e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 33 | GCF_000783935.2_02527 | GCF_000783935.2_02538 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02527 | 2 | 25 | -2.176516 | hypothetical protein | |
| GCF_000783935.2_02528 | 1 | 25 | -1.872351 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | |
| GCF_000783935.2_02529 | 2 | 25 | -2.093900 | Bifunctional | |
| GCF_000783935.2_02530 | 3 | 32 | -3.264445 | Methionine aminopeptidase | |
| GCF_000783935.2_02531 | 3 | 30 | -3.092004 | 30S ribosomal protein S2 | |
| GCF_000783935.2_02532 | 1 | 23 | -2.467755 | Elongation factor Ts | |
| GCF_000783935.2_02533 | -1 | 18 | -2.318237 | Uridylate kinase | |
| GCF_000783935.2_02534 | 0 | 16 | -2.632903 | Ribosome-recycling factor | |
| GCF_000783935.2_02535 | -1 | 16 | -2.814991 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | |
| GCF_000783935.2_02536 | 0 | 18 | -3.527112 | Ditrans,polycis-undecaprenyl-diphosphate | |
| GCF_000783935.2_02537 | 1 | 18 | -3.636029 | Phosphatidate cytidylyltransferase | |
| GCF_000783935.2_02538 | 1 | 19 | -3.746568 | Regulator of sigma-E protease RseP |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXINA | 28 | 0.036 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF07212 | 32 | 0.003 | Hyaluronoglucosaminidase | |
>PF07212#Hyaluronoglucosaminidase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CARBMTKINASE | 30 | 0.008 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 34 | GCF_000783935.2_02603 | GCF_000783935.2_02671 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02603 | 2 | 15 | -2.416217 | hypothetical protein | |
| GCF_000783935.2_02604 | 1 | 13 | -1.351238 | Succinate-semialdehyde dehydrogenase [NADP(+)] | |
| GCF_000783935.2_02605 | 1 | 14 | -2.148928 | 2,3-diketo-L-gulonate-binding periplasmic | |
| GCF_000783935.2_02606 | -1 | 14 | -1.371440 | Sialic acid TRAP transporter permease protein | |
| GCF_000783935.2_02607 | 0 | 17 | -1.803617 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
| GCF_000783935.2_02608 | -1 | 17 | -1.500167 | L-fucose mutarotase | |
| GCF_000783935.2_02609 | -2 | 28 | -5.777860 | HTH-type transcriptional regulator GalS | |
| GCF_000783935.2_02610 | -2 | 25 | -4.573649 | HTH-type transcriptional repressor ComR | |
| GCF_000783935.2_02611 | -2 | 25 | -4.503014 | Inosose dehydratase | |
| GCF_000783935.2_02612 | -2 | 25 | -4.566970 | Soluble epoxide hydrolase | |
| GCF_000783935.2_02613 | -2 | 26 | -4.795427 | Carboxylesterase NlhH | |
| GCF_000783935.2_02614 | -1 | 29 | -5.553713 | hypothetical protein | |
| GCF_000783935.2_02615 | -1 | 18 | 0.457280 | hypothetical protein | |
| GCF_000783935.2_02616 | 5 | 28 | -0.335517 | hypothetical protein | |
| GCF_000783935.2_02617 | 4 | 29 | -1.594555 | hypothetical protein | |
| GCF_000783935.2_02618 | 1 | 35 | -6.850892 | hypothetical protein | |
| GCF_000783935.2_02619 | 3 | 49 | -13.612344 | hypothetical protein | |
| GCF_000783935.2_02620 | 3 | 49 | -13.812453 | hypothetical protein | |
| GCF_000783935.2_02621 | 4 | 56 | -16.638557 | hypothetical protein | |
| GCF_000783935.2_02622 | 5 | 58 | -17.030726 | hypothetical protein | |
| GCF_000783935.2_02623 | 5 | 61 | -18.032958 | hypothetical protein | |
| GCF_000783935.2_02624 | 2 | 47 | -13.963408 | hypothetical protein | |
| GCF_000783935.2_02625 | 0 | 33 | -9.107208 | Prophage integrase IntS | |
| GCF_000783935.2_02627 | 0 | 26 | -8.299892 | *hypothetical protein | |
| GCF_000783935.2_02628 | -1 | 22 | -6.941351 | putative glycosyltransferase YkoT | |
| GCF_000783935.2_02629 | -1 | 14 | -4.200770 | hypothetical protein | |
| GCF_000783935.2_02630 | -2 | 15 | 1.544044 | Gamma-glutamyl phosphate reductase | |
| GCF_000783935.2_02631 | 0 | 14 | 2.698757 | Glutamate 5-kinase | |
| GCF_000783935.2_02632 | 1 | 14 | 3.113367 | Outer membrane porin PhoE | |
| GCF_000783935.2_02633 | 1 | 15 | 5.043992 | Murein DD-endopeptidase MepS/Murein | |
| GCF_000783935.2_02634 | 2 | 18 | 5.668977 | HTH-type transcriptional activator CmpR | |
| GCF_000783935.2_02635 | 2 | 17 | 5.971940 | hypothetical protein | |
| GCF_000783935.2_02636 | 3 | 19 | 6.046444 | hypothetical protein | |
| GCF_000783935.2_02637 | 1 | 18 | 5.070890 | Aliphatic sulfonates import ATP-binding protein | |
| GCF_000783935.2_02638 | 1 | 16 | 4.054916 | hypothetical protein | |
| GCF_000783935.2_02639 | 0 | 14 | 2.592487 | HTH-type transcriptional regulator NimR | |
| GCF_000783935.2_02640 | -1 | 12 | 1.580884 | hypothetical protein | |
| GCF_000783935.2_02641 | -1 | 16 | 1.568826 | putative phosphatase | |
| GCF_000783935.2_02642 | -2 | 17 | 1.440144 | Phosphate-import permease protein PhnE | |
| GCF_000783935.2_02643 | -2 | 16 | 2.033125 | hypothetical protein | |
| GCF_000783935.2_02644 | -2 | 18 | 2.847896 | hypothetical protein | |
| GCF_000783935.2_02645 | -1 | 19 | 4.333298 | Phosphate-import ATP-binding protein PhnC | |
| GCF_000783935.2_02646 | 0 | 19 | 4.939239 | N-acetylcysteine deacetylase | |
| GCF_000783935.2_02647 | 1 | 20 | 4.229073 | putative sulfoacetate transporter SauU | |
| GCF_000783935.2_02648 | 1 | 20 | 4.228048 | HTH-type transcriptional regulator TsaR | |
| GCF_000783935.2_02649 | 0 | 16 | 4.274784 | putative glutamine ABC transporter permease | |
| GCF_000783935.2_02650 | -1 | 14 | 3.711752 | Glutamate/aspartate import permease protein | |
| GCF_000783935.2_02651 | -1 | 13 | 3.539857 | Glutamine transport ATP-binding protein GlnQ | |
| GCF_000783935.2_02652 | 0 | 14 | 2.857625 | ABC transporter glutamine-binding protein GlnH | |
| GCF_000783935.2_02653 | 0 | 14 | 3.524702 | hypothetical protein | |
| GCF_000783935.2_02654 | -1 | 16 | 3.568967 | Ethanolamine ammonia-lyase light chain | |
| GCF_000783935.2_02655 | -1 | 17 | 3.097291 | Ethanolamine ammonia-lyase heavy chain | |
| GCF_000783935.2_02656 | -2 | 19 | 2.605880 | putative amino acid permease YhdG | |
| GCF_000783935.2_02657 | -2 | 17 | 2.393517 | Amino-acid permease RocC | |
| GCF_000783935.2_02658 | -1 | 20 | 2.984787 | Homocysteine S-methyltransferase | |
| GCF_000783935.2_02659 | 0 | 19 | 2.467658 | Sulfate/thiosulfate import ATP-binding protein | |
| GCF_000783935.2_02660 | 0 | 18 | 2.492718 | hypothetical protein | |
| GCF_000783935.2_02661 | 3 | 16 | 2.749130 | hypothetical protein | |
| GCF_000783935.2_02662 | 3 | 16 | 3.623311 | Membrane sensor protein UhpC | |
| GCF_000783935.2_02663 | 1 | 18 | 3.452728 | Signal transduction histidine-protein | |
| GCF_000783935.2_02664 | -1 | 16 | 3.038282 | Transcriptional regulatory protein UhpA | |
| GCF_000783935.2_02665 | -1 | 14 | 2.843684 | Taurine-binding periplasmic protein | |
| GCF_000783935.2_02666 | 0 | 12 | -1.016215 | Taurine import ATP-binding protein TauB | |
| GCF_000783935.2_02667 | 1 | 13 | -2.725633 | Putative aliphatic sulfonates transport permease | |
| GCF_000783935.2_02668 | 1 | 14 | -2.954128 | Alpha-ketoglutarate-dependent taurine | |
| GCF_000783935.2_02669 | 1 | 15 | -3.311476 | hypothetical protein | |
| GCF_000783935.2_02670 | 3 | 17 | -4.534523 | Delta-aminolevulinic acid dehydratase | |
| GCF_000783935.2_02671 | 3 | 16 | -4.399350 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 96 | 9e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 55 | 1e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CARBMTKINASE | 40 | 1e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ECOLIPORIN | 537 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 28 | 0.026 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 54 | 5e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 29 | 0.026 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 35 | 4e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 44 | 5e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 75 | 4e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BINARYTOXINB | 31 | 0.007 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PRTACTNFAMLY | 118 | 3e-29 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 35 | GCF_000783935.2_02680 | GCF_000783935.2_02697 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02680 | 2 | 12 | -1.421341 | Staphyloferrin B transporter | |
| GCF_000783935.2_02681 | 2 | 15 | -2.280590 | 5-keto-D-gluconate 5-reductase | |
| GCF_000783935.2_02682 | 0 | 11 | -1.171878 | Quinolone resistance transporter | |
| GCF_000783935.2_02683 | 1 | 11 | -0.221222 | HTH-type transcriptional regulator GntR | |
| GCF_000783935.2_02684 | 3 | 13 | 0.962550 | Anti-adapter protein IraP | |
| GCF_000783935.2_02685 | 3 | 14 | 1.745184 | Alkaline phosphatase | |
| GCF_000783935.2_02686 | 3 | 12 | 2.639079 | Phosphate starvation-inducible protein PsiF | |
| GCF_000783935.2_02687 | 2 | 14 | 1.913840 | Pyrroline-5-carboxylate reductase | |
| GCF_000783935.2_02688 | 2 | 18 | 1.319351 | hypothetical protein | |
| GCF_000783935.2_02689 | 1 | 15 | 0.001168 | hypothetical protein | |
| GCF_000783935.2_02690 | 0 | 13 | 0.167312 | Shikimate kinase 2 | |
| GCF_000783935.2_02691 | -1 | 14 | -1.111648 | putative protein YaiA | |
| GCF_000783935.2_02692 | 5 | 11 | 1.854537 | hypothetical protein | |
| GCF_000783935.2_02693 | 6 | 13 | 2.929477 | Pyrimidine/purine nucleoside phosphorylase | |
| GCF_000783935.2_02694 | 5 | 11 | 2.564225 | Recombination-associated protein RdgC | |
| GCF_000783935.2_02695 | 4 | 14 | 2.755294 | Fructokinase | |
| GCF_000783935.2_02696 | 4 | 12 | 2.555011 | hypothetical protein | |
| GCF_000783935.2_02697 | 3 | 12 | 2.484639 | Nuclease SbcCD subunit C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 124 | 3e-34 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 164 | 3e-52 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 30 | 0.023 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TACYTOLYSIN | 31 | 0.008 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 41 | 3e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 36 | GCF_000783935.2_02733 | GCF_000783935.2_02768 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02733 | 3 | 15 | -0.282116 | Farnesyl diphosphate synthase | |
| GCF_000783935.2_02734 | 1 | 14 | -0.626304 | Exodeoxyribonuclease 7 small subunit | |
| GCF_000783935.2_02735 | 0 | 12 | -0.208585 | tRNA sulfurtransferase | |
| GCF_000783935.2_02736 | -2 | 13 | 1.536476 | Protein/nucleic acid deglycase 3 | |
| GCF_000783935.2_02737 | -1 | 13 | 1.461525 | 2-dehydropantoate 2-reductase | |
| GCF_000783935.2_02738 | 0 | 13 | 2.506513 | hypothetical protein | |
| GCF_000783935.2_02739 | 0 | 14 | 4.177414 | Inner membrane transport protein YajR | |
| GCF_000783935.2_02740 | 0 | 16 | 4.706166 | Inositol 2-dehydrogenase/D-chiro-inositol | |
| GCF_000783935.2_02741 | 0 | 16 | 5.325997 | scyllo-inositol 2-dehydrogenase (NAD(+)) | |
| GCF_000783935.2_02742 | 0 | 15 | 5.264500 | 4-hydroxybenzoate transporter PcaK | |
| GCF_000783935.2_02743 | -2 | 14 | 5.491305 | hypothetical protein | |
| GCF_000783935.2_02744 | -2 | 14 | 4.359157 | 3-oxosteroid 1-dehydrogenase | |
| GCF_000783935.2_02745 | -1 | 14 | 2.325340 | hypothetical protein | |
| GCF_000783935.2_02746 | 0 | 15 | 2.140767 | 3-oxosteroid 1-dehydrogenase | |
| GCF_000783935.2_02747 | 2 | 21 | -0.735991 | Shikimate dehydrogenase (NADP(+)) | |
| GCF_000783935.2_02748 | 4 | 24 | -2.794241 | Pca operon regulatory protein | |
| GCF_000783935.2_02749 | 2 | 22 | -2.284024 | Protoheme IX farnesyltransferase | |
| GCF_000783935.2_02750 | 1 | 22 | -2.505571 | Cytochrome bo(3) ubiquinol oxidase subunit 4 | |
| GCF_000783935.2_02751 | 0 | 21 | -2.295417 | Cytochrome bo(3) ubiquinol oxidase subunit 3 | |
| GCF_000783935.2_02752 | 0 | 19 | -2.512782 | Cytochrome bo(3) ubiquinol oxidase subunit 1 | |
| GCF_000783935.2_02753 | 3 | 21 | -3.020414 | Cytochrome bo(3) ubiquinol oxidase subunit 2 | |
| GCF_000783935.2_02754 | 2 | 19 | -1.956636 | Anhydromuropeptide permease | |
| GCF_000783935.2_02755 | 4 | 28 | -3.737032 | hypothetical protein | |
| GCF_000783935.2_02756 | 4 | 26 | -3.446036 | hypothetical protein | |
| GCF_000783935.2_02757 | 4 | 26 | -3.434080 | DNA-binding transcriptional regulator BolA | |
| GCF_000783935.2_02758 | 3 | 25 | -3.154759 | Trigger factor | |
| GCF_000783935.2_02759 | 2 | 21 | -2.887711 | ATP-dependent Clp protease proteolytic subunit | |
| GCF_000783935.2_02760 | 2 | 20 | -2.964559 | ATP-dependent Clp protease ATP-binding subunit | |
| GCF_000783935.2_02761 | 1 | 16 | -2.555137 | Lon protease | |
| GCF_000783935.2_02762 | 2 | 14 | -1.020299 | DNA-binding protein HU-beta | |
| GCF_000783935.2_02763 | 1 | 13 | -0.563980 | Peptidyl-prolyl cis-trans isomerase D | |
| GCF_000783935.2_02764 | -1 | 16 | 0.394433 | hypothetical protein | |
| GCF_000783935.2_02765 | 0 | 13 | 0.285480 | Long-chain acyl-CoA thioesterase FadM | |
| GCF_000783935.2_02766 | 1 | 12 | 1.187140 | 7-cyano-7-deazaguanine synthase | |
| GCF_000783935.2_02767 | 3 | 13 | 1.815093 | HTH-type transcriptional regulator SgrR | |
| GCF_000783935.2_02768 | 2 | 13 | 1.317941 | HMP-PP phosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TYPE3OMOPROT | 27 | 0.039 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 85 | 4e-20 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 54 | 8e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 36 | 4e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 30 | 0.024 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | GPOSANCHOR | 34 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DNABINDINGHU | 116 | 4e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 29 | 0.021 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 37 | GCF_000783935.2_02798 | GCF_000783935.2_02809 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02798 | 2 | 20 | -3.252126 | Inner membrane protein YlaC | |
| GCF_000783935.2_02799 | 1 | 20 | -3.700927 | Maltose O-acetyltransferase | |
| GCF_000783935.2_02800 | 3 | 14 | -2.539264 | Hemolysin expression-modulating protein Hha | |
| GCF_000783935.2_02801 | 3 | 14 | -2.271126 | Hha toxicity modulator TomB | |
| GCF_000783935.2_02802 | 3 | 14 | -1.305105 | Multidrug efflux pump subunit AcrB | |
| GCF_000783935.2_02803 | 5 | 11 | -1.382063 | Multidrug efflux pump subunit AcrA | |
| GCF_000783935.2_02804 | 4 | 10 | -1.087450 | HTH-type transcriptional regulator AcrR | |
| GCF_000783935.2_02805 | 3 | 11 | 0.967741 | Mechanosensitive channel MscK | |
| GCF_000783935.2_02806 | 4 | 15 | 2.217775 | hypothetical protein | |
| GCF_000783935.2_02807 | 3 | 14 | 2.664746 | Primosomal replication protein N'' | |
| GCF_000783935.2_02808 | 2 | 16 | 1.220759 | Inner membrane protein YbaN | |
| GCF_000783935.2_02809 | 2 | 17 | 1.064565 | Adenine phosphoribosyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 1376 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 195 | 2e-65 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CHANLCOLICIN | 37 | 5e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 38 | GCF_000783935.2_02855 | GCF_000783935.2_02862 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02855 | 1 | 23 | -3.949329 | hypothetical protein | |
| GCF_000783935.2_02856 | 1 | 24 | -5.273384 | Citrate synthase | |
| GCF_000783935.2_02857 | 4 | 41 | -11.198353 | hypothetical protein | |
| GCF_000783935.2_02858 | 4 | 38 | -11.344219 | Cold shock protein YdfK | |
| GCF_000783935.2_02859 | 2 | 30 | -12.061037 | Cold shock protein YdfK | |
| GCF_000783935.2_02860 | 0 | 28 | -9.498649 | hypothetical protein | |
| GCF_000783935.2_02861 | 0 | 26 | -7.796561 | hypothetical protein | |
| GCF_000783935.2_02862 | 1 | 22 | -4.146980 | hypothetical protein |
| 39 | GCF_000783935.2_02879 | GCF_000783935.2_02918 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02879 | 1 | 17 | -4.217636 | hypothetical protein | |
| GCF_000783935.2_02880 | 1 | 14 | -3.773843 | hypothetical protein | |
| GCF_000783935.2_02881 | 2 | 12 | -3.160518 | hypothetical protein | |
| GCF_000783935.2_02882 | 1 | 12 | -3.280023 | putative HTH-type transcriptional regulator | |
| GCF_000783935.2_02883 | 2 | 14 | -3.198390 | hypothetical protein | |
| GCF_000783935.2_02884 | 3 | 13 | -0.625650 | D-threitol-binding protein | |
| GCF_000783935.2_02885 | 3 | 15 | -0.203511 | Galactose/methyl galactoside import ATP-binding | |
| GCF_000783935.2_02886 | 1 | 15 | 2.006983 | Ribose import permease protein RbsC | |
| GCF_000783935.2_02887 | 2 | 17 | 3.641847 | hypothetical protein | |
| GCF_000783935.2_02888 | 2 | 20 | 4.697477 | hypothetical protein | |
| GCF_000783935.2_02889 | 0 | 23 | 5.254955 | N-carbamoyl-L-amino-acid hydrolase | |
| GCF_000783935.2_02890 | 0 | 26 | 5.177450 | hypothetical protein | |
| GCF_000783935.2_02891 | 0 | 23 | 5.488152 | Leucine-, isoleucine-, valine-, threonine-, and | |
| GCF_000783935.2_02892 | 0 | 21 | 4.993586 | High-affinity branched-chain amino acid | |
| GCF_000783935.2_02893 | 0 | 21 | 4.672776 | Lipopolysaccharide export system ATP-binding | |
| GCF_000783935.2_02894 | 0 | 21 | 4.005661 | hypothetical protein | |
| GCF_000783935.2_02895 | 1 | 21 | 3.850591 | High-affinity branched-chain amino acid | |
| GCF_000783935.2_02896 | 0 | 22 | 3.912352 | Glycine cleavage system transcriptional | |
| GCF_000783935.2_02897 | -1 | 21 | 3.340579 | PTS system beta-glucoside-specific EIIBCA | |
| GCF_000783935.2_02898 | -2 | 19 | 2.557131 | Aryl-phospho-beta-D-glucosidase BglC | |
| GCF_000783935.2_02899 | -2 | 18 | 2.500685 | Transcription antiterminator LicT | |
| GCF_000783935.2_02900 | -1 | 16 | 2.165279 | Catabolite repressor/activator | |
| GCF_000783935.2_02901 | 0 | 16 | 1.856459 | Sucrose-6-phosphate hydrolase | |
| GCF_000783935.2_02902 | 2 | 13 | 0.271884 | Negative regulator of SacY activity | |
| GCF_000783935.2_02903 | 2 | 13 | 0.190959 | Sucrose porin | |
| GCF_000783935.2_02904 | 4 | 15 | 0.128635 | Fructokinase | |
| GCF_000783935.2_02905 | 4 | 14 | -0.345684 | hypothetical protein | |
| GCF_000783935.2_02906 | 2 | 14 | 0.922869 | hypothetical protein | |
| GCF_000783935.2_02907 | 1 | 15 | 2.284049 | hypothetical protein | |
| GCF_000783935.2_02908 | 1 | 16 | 2.834794 | Hippurate hydrolase | |
| GCF_000783935.2_02909 | 1 | 16 | 3.905534 | Histidine-binding periplasmic protein | |
| GCF_000783935.2_02910 | 0 | 16 | 3.731819 | 1-deoxyxylulose-5-phosphate synthase YajO | |
| GCF_000783935.2_02911 | 0 | 18 | 3.479981 | Protein MoaF | |
| GCF_000783935.2_02912 | 1 | 15 | 4.142118 | D-beta-hydroxybutyrate dehydrogenase | |
| GCF_000783935.2_02913 | 2 | 13 | 3.547983 | Arylsulfatase | |
| GCF_000783935.2_02914 | 1 | 13 | 3.806210 | Anaerobic sulfatase-maturating enzyme | |
| GCF_000783935.2_02915 | -1 | 13 | 3.379106 | hypothetical protein | |
| GCF_000783935.2_02916 | -1 | 14 | 4.421589 | HTH-type transcriptional regulator MalT | |
| GCF_000783935.2_02917 | -2 | 14 | 3.471014 | hypothetical protein | |
| GCF_000783935.2_02918 | -2 | 15 | 3.401754 | Histone deacetylase-like amidohydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 29 | 0.037 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | LPSBIOSNTHSS | 29 | 0.012 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 81 | 2e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 40 | GCF_000783935.2_02928 | GCF_000783935.2_03043 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02928 | 2 | 18 | 2.570524 | Inosose dehydratase | |
| GCF_000783935.2_02929 | 2 | 17 | 2.741965 | Inositol 2-dehydrogenase/D-chiro-inositol | |
| GCF_000783935.2_02930 | 2 | 17 | 2.665930 | hypothetical protein | |
| GCF_000783935.2_02931 | 1 | 16 | 2.630057 | Ribose operon repressor | |
| GCF_000783935.2_02932 | 2 | 14 | 1.872507 | Miniconductance mechanosensitive channel YbdG | |
| GCF_000783935.2_02933 | 1 | 15 | 3.197803 | Multidrug resistance protein Stp | |
| GCF_000783935.2_02934 | -1 | 17 | 2.138465 | hypothetical protein | |
| GCF_000783935.2_02935 | -1 | 16 | 0.919008 | hypothetical protein | |
| GCF_000783935.2_02936 | -1 | 13 | 0.531674 | Oxygen-insensitive NAD(P)H nitroreductase | |
| GCF_000783935.2_02937 | -2 | 13 | 1.864124 | hypothetical protein | |
| GCF_000783935.2_02938 | -2 | 12 | 1.923807 | hypothetical protein | |
| GCF_000783935.2_02939 | -1 | 11 | 1.819412 | hypothetical protein | |
| GCF_000783935.2_02940 | -2 | 14 | 2.466691 | Regulatory protein SoxS | |
| GCF_000783935.2_02941 | -2 | 15 | 3.446317 | Ferrichrome outer membrane transporter/phage | |
| GCF_000783935.2_02942 | 0 | 18 | 4.841022 | hypothetical protein | |
| GCF_000783935.2_02943 | 0 | 19 | 4.442901 | hypothetical protein | |
| GCF_000783935.2_02944 | 0 | 18 | 4.634057 | hypothetical protein | |
| GCF_000783935.2_02945 | -1 | 17 | 4.435548 | putative cation-transporting ATPase F | |
| GCF_000783935.2_02946 | 0 | 18 | 4.656887 | Multidrug resistance protein MdtA | |
| GCF_000783935.2_02947 | -1 | 18 | 4.308361 | Efflux pump membrane transporter BepG | |
| GCF_000783935.2_02948 | -1 | 16 | 3.101120 | hypothetical protein | |
| GCF_000783935.2_02949 | 0 | 15 | 3.665464 | Putative glutamate--cysteine ligase 2 | |
| GCF_000783935.2_02950 | -1 | 16 | 4.260624 | Periplasmic dipeptide transport protein | |
| GCF_000783935.2_02951 | 0 | 19 | 4.564273 | Glutathione transport system permease protein | |
| GCF_000783935.2_02952 | 0 | 17 | 4.834285 | Glutathione transport system permease protein | |
| GCF_000783935.2_02953 | -1 | 15 | 4.130415 | Vitamin B12 import ATP-binding protein BtuD | |
| GCF_000783935.2_02954 | -1 | 15 | 4.059621 | Oligopeptide transport ATP-binding protein OppD | |
| GCF_000783935.2_02955 | -1 | 15 | 3.013803 | 2-amino-5-chloromuconic acid deaminase | |
| GCF_000783935.2_02956 | -1 | 14 | 1.750982 | N-carbamoyl-L-amino-acid hydrolase | |
| GCF_000783935.2_02957 | -2 | 16 | 1.765282 | HTH-type transcriptional regulator TauR | |
| GCF_000783935.2_02958 | -2 | 16 | 0.963551 | L-cystine-binding protein FliY | |
| GCF_000783935.2_02959 | -1 | 16 | 1.785591 | L-cystine transport system permease protein | |
| GCF_000783935.2_02960 | -1 | 17 | 2.662990 | Histidine transport system permease protein | |
| GCF_000783935.2_02961 | 0 | 19 | 4.359018 | Octopine permease ATP-binding protein P | |
| GCF_000783935.2_02962 | 0 | 18 | 4.988169 | Sulfoacetaldehyde reductase | |
| GCF_000783935.2_02963 | -1 | 17 | 4.213230 | Taurine--pyruvate aminotransferase | |
| GCF_000783935.2_02964 | 1 | 15 | 4.381580 | Oligopeptide transport ATP-binding protein OppF | |
| GCF_000783935.2_02965 | 0 | 16 | 4.473336 | Dipeptide transport ATP-binding protein DppD | |
| GCF_000783935.2_02966 | -1 | 18 | 4.507673 | putative D,D-dipeptide transport system permease | |
| GCF_000783935.2_02967 | -1 | 19 | 4.058338 | Dipeptide transport system permease protein | |
| GCF_000783935.2_02968 | -1 | 19 | 2.752228 | putative D,D-dipeptide-binding periplasmic | |
| GCF_000783935.2_02969 | 0 | 17 | 2.701103 | hypothetical protein | |
| GCF_000783935.2_02970 | 1 | 17 | 2.187375 | Oxygen-dependent choline dehydrogenase | |
| GCF_000783935.2_02971 | 1 | 16 | 1.313786 | NAD/NADP-dependent betaine aldehyde | |
| GCF_000783935.2_02972 | 1 | 13 | -1.146776 | HTH-type transcriptional regulator BetI | |
| GCF_000783935.2_02973 | 1 | 14 | -1.935753 | High-affinity choline transport protein | |
| GCF_000783935.2_02974 | 1 | 20 | -3.138327 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | |
| GCF_000783935.2_02975 | 0 | 19 | -2.249850 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
| GCF_000783935.2_02976 | 0 | 19 | -2.485563 | Ribose import permease protein RbsC | |
| GCF_000783935.2_02977 | -1 | 20 | -3.110673 | Ribose import ATP-binding protein RbsA | |
| GCF_000783935.2_02978 | -1 | 17 | -1.875574 | hypothetical protein | |
| GCF_000783935.2_02979 | -1 | 15 | -1.409362 | Ribose import binding protein RbsB | |
| GCF_000783935.2_02980 | -1 | 14 | 0.144016 | Apulose kinase | |
| GCF_000783935.2_02981 | 0 | 12 | -0.346430 | Sorbitol operon regulator | |
| GCF_000783935.2_02982 | 0 | 13 | 1.608358 | hypothetical protein | |
| GCF_000783935.2_02983 | 1 | 13 | 1.769374 | Apulose-4-phosphate transketolase subunit A | |
| GCF_000783935.2_02984 | -2 | 13 | 4.229847 | Apulose-4-phosphate transketolase subunit B | |
| GCF_000783935.2_02985 | -2 | 15 | 4.722948 | Enterobactin synthase component D | |
| GCF_000783935.2_02986 | -1 | 16 | 5.152318 | Ferrienterobactin receptor | |
| GCF_000783935.2_02987 | 2 | 14 | 6.664458 | Enterochelin esterase | |
| GCF_000783935.2_02988 | 2 | 17 | 6.692613 | Enterobactin biosynthesis protein YbdZ | |
| GCF_000783935.2_02989 | 1 | 14 | 6.440121 | Enterobactin synthase component F | |
| GCF_000783935.2_02990 | 1 | 13 | 5.625644 | Ferric enterobactin transport ATP-binding | |
| GCF_000783935.2_02991 | 0 | 14 | 5.517544 | Ferric enterobactin transport system permease | |
| GCF_000783935.2_02992 | -1 | 13 | 4.568768 | Ferric enterobactin transport system permease | |
| GCF_000783935.2_02993 | -1 | 15 | 4.477311 | Enterobactin exporter EntS | |
| GCF_000783935.2_02994 | -1 | 16 | 4.293954 | Ferrienterobactin-binding periplasmic protein | |
| GCF_000783935.2_02995 | -2 | 16 | 4.910923 | Isochorismate synthase EntC | |
| GCF_000783935.2_02996 | -1 | 15 | 4.080496 | Enterobactin synthase component E | |
| GCF_000783935.2_02997 | 0 | 15 | 3.611766 | Enterobactin synthase component B | |
| GCF_000783935.2_02998 | 1 | 15 | 4.587200 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
| GCF_000783935.2_02999 | 1 | 15 | 4.658250 | Proofreading thioesterase EntH | |
| GCF_000783935.2_03000 | -1 | 15 | 4.194892 | hypothetical protein | |
| GCF_000783935.2_03001 | 0 | 18 | 3.677697 | Peptide transporter CstA | |
| GCF_000783935.2_03002 | 0 | 18 | 3.426134 | hypothetical protein | |
| GCF_000783935.2_03003 | 0 | 19 | 3.560149 | Cyclic-di-GMP-binding biofilm dispersal mediator | |
| GCF_000783935.2_03004 | -2 | 18 | 2.915413 | Hydroxycarboxylate dehydrogenase A | |
| GCF_000783935.2_03005 | -2 | 17 | 2.905343 | Ribose import ATP-binding protein RbsA | |
| GCF_000783935.2_03006 | -2 | 16 | 3.361070 | Ribose import permease protein RbsC | |
| GCF_000783935.2_03007 | -1 | 13 | 2.986496 | hypothetical protein | |
| GCF_000783935.2_03008 | -1 | 13 | 3.663282 | hypothetical protein | |
| GCF_000783935.2_03009 | -1 | 14 | 3.885217 | Methylthioribose kinase | |
| GCF_000783935.2_03010 | 0 | 15 | 4.287269 | Methylthioribose-1-phosphate isomerase | |
| GCF_000783935.2_03011 | 0 | 17 | 3.905265 | Glucose-1-phosphatase | |
| GCF_000783935.2_03012 | 0 | 17 | 3.385012 | Glycerol-3-phosphate transporter | |
| GCF_000783935.2_03013 | 1 | 18 | 3.853220 | Inositol-1-monophosphatase | |
| GCF_000783935.2_03014 | 1 | 18 | 3.697102 | Ribose operon repressor | |
| GCF_000783935.2_03015 | 0 | 17 | 4.608886 | Cytosine deaminase | |
| GCF_000783935.2_03016 | 1 | 18 | 4.838732 | hypothetical protein | |
| GCF_000783935.2_03017 | -1 | 17 | 5.364785 | Cytosine permease | |
| GCF_000783935.2_03018 | 0 | 19 | 5.777370 | hypothetical protein | |
| GCF_000783935.2_03019 | 1 | 18 | 5.982874 | Methylthioribulose-1-phosphate dehydratase | |
| GCF_000783935.2_03020 | 2 | 19 | 6.359268 | L-xylulose/3-keto-L-gulonate kinase | |
| GCF_000783935.2_03021 | 2 | 17 | 4.674236 | Putative 2-hydroxyacid dehydrogenase YoaD | |
| GCF_000783935.2_03022 | 2 | 15 | 5.020020 | putative sugar kinase YdjH | |
| GCF_000783935.2_03023 | 1 | 14 | 5.181494 | Ribose import permease protein RbsC | |
| GCF_000783935.2_03024 | 1 | 14 | 4.730447 | D-allose transport system permease protein AlsC | |
| GCF_000783935.2_03025 | 1 | 14 | 3.754485 | Xylose import ATP-binding protein XylG | |
| GCF_000783935.2_03026 | -1 | 13 | 3.038396 | hypothetical protein | |
| GCF_000783935.2_03027 | -2 | 12 | 3.309552 | Dimethyl sulfoxide/trimethylamine N-oxide | |
| GCF_000783935.2_03028 | 0 | 15 | 0.852138 | hypothetical protein | |
| GCF_000783935.2_03029 | -1 | 13 | -1.965756 | Acireductone dioxygenase | |
| GCF_000783935.2_03030 | -1 | 13 | -2.434080 | Enolase-phosphatase E1 | |
| GCF_000783935.2_03031 | -1 | 14 | -2.803285 | Methionine aminotransferase | |
| GCF_000783935.2_03032 | 0 | 13 | -3.657459 | putative protein YbdM | |
| GCF_000783935.2_03033 | 1 | 12 | -3.740586 | Phosphoadenosine phosphosulfate reductase | |
| GCF_000783935.2_03034 | 1 | 14 | -3.861366 | putative HTH-type transcriptional regulator | |
| GCF_000783935.2_03035 | 1 | 14 | -2.771323 | Thiol:disulfide interchange protein DsbG | |
| GCF_000783935.2_03036 | 1 | 16 | -2.436889 | Alkyl hydroperoxide reductase C | |
| GCF_000783935.2_03037 | -1 | 12 | -1.821558 | Alkyl hydroperoxide reductase subunit F | |
| GCF_000783935.2_03038 | -1 | 14 | -2.425278 | Universal stress protein UP12 | |
| GCF_000783935.2_03039 | -1 | 14 | -2.754299 | Regulator of nucleoside diphosphate kinase | |
| GCF_000783935.2_03040 | -1 | 15 | -3.127530 | Non-heme chloroperoxidase | |
| GCF_000783935.2_03041 | 0 | 15 | -2.303498 | Ribonuclease I | |
| GCF_000783935.2_03042 | 0 | 16 | -2.939618 | Putative cryptic C4-dicarboxylate transporter | |
| GCF_000783935.2_03043 | 2 | 20 | -2.788729 | Lipid A palmitoyltransferase PagP |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 101 | 4e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 58 | 1e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 41 | 4e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 902 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 85 | 6e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 59 | 3e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 130 | 9e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 136 | 3e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ENTSNTHTASED | 192 | 3e-64 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FERRIBNDNGPP | 60 | 1e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ISCHRISMTASE | 417 | e-150 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 330 | e-117 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 31 | 0.015 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 135 | 6e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 37 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 37 | 1e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 41 | GCF_000783935.2_03090 | GCF_000783935.2_03142 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03090 | 1 | 14 | 3.116864 | Diacetyl reductase [(S)-acetoin forming] | |
| GCF_000783935.2_03091 | 0 | 14 | 3.078697 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione | |
| GCF_000783935.2_03092 | 2 | 16 | 1.357221 | HTH-type transcriptional regulator MurR | |
| GCF_000783935.2_03093 | 3 | 15 | 1.446517 | Succinate-semialdehyde dehydrogenase [NADP(+)] | |
| GCF_000783935.2_03094 | 3 | 14 | 1.217611 | 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | |
| GCF_000783935.2_03095 | 2 | 16 | 0.208903 | Hydroxypyruvate reductase | |
| GCF_000783935.2_03096 | 1 | 18 | -0.700760 | Inositol 2-dehydrogenase | |
| GCF_000783935.2_03097 | 0 | 16 | -1.440777 | hypothetical protein | |
| GCF_000783935.2_03098 | -1 | 15 | -0.347804 | Inosose dehydratase | |
| GCF_000783935.2_03099 | -1 | 14 | -0.858509 | Inositol 2-dehydrogenase/D-chiro-inositol | |
| GCF_000783935.2_03100 | -1 | 14 | -1.743129 | hypothetical protein | |
| GCF_000783935.2_03101 | 0 | 14 | -2.269937 | hypothetical protein | |
| GCF_000783935.2_03102 | 2 | 19 | -0.679943 | Ferric uptake regulation protein | |
| GCF_000783935.2_03103 | 1 | 13 | 0.113523 | Flavodoxin | |
| GCF_000783935.2_03104 | 1 | 11 | 0.912555 | putative protein YbfE | |
| GCF_000783935.2_03105 | -1 | 10 | 3.119193 | Esterase YbfF | |
| GCF_000783935.2_03106 | -1 | 10 | 3.339798 | Negative modulator of initiation of replication | |
| GCF_000783935.2_03107 | -2 | 12 | 3.929744 | Phosphoglucomutase | |
| GCF_000783935.2_03108 | -2 | 12 | 3.958660 | KDP operon transcriptional regulatory protein | |
| GCF_000783935.2_03109 | -2 | 12 | 4.064178 | hypothetical protein | |
| GCF_000783935.2_03110 | -1 | 11 | 3.989352 | Sensor protein KdpD | |
| GCF_000783935.2_03111 | -1 | 13 | 3.094527 | Potassium-transporting ATPase KdpC subunit | |
| GCF_000783935.2_03112 | -1 | 13 | 2.886211 | Potassium-transporting ATPase ATP-binding | |
| GCF_000783935.2_03113 | -1 | 14 | 2.880233 | Potassium-transporting ATPase potassium-binding | |
| GCF_000783935.2_03114 | 0 | 15 | 3.076655 | hypothetical protein | |
| GCF_000783935.2_03115 | 0 | 15 | 3.225879 | Deoxyribodipyrimidine photo-lyase | |
| GCF_000783935.2_03116 | 0 | 15 | 2.914633 | Dipeptide permease D | |
| GCF_000783935.2_03117 | 0 | 18 | 2.956846 | GTP cyclohydrolase 1 type 2 | |
| GCF_000783935.2_03118 | 0 | 19 | 3.386431 | 5-oxoprolinase subunit B | |
| GCF_000783935.2_03119 | 1 | 19 | 3.048221 | 5-oxoprolinase subunit C | |
| GCF_000783935.2_03120 | 0 | 12 | 1.387092 | 5-oxoprolinase subunit A | |
| GCF_000783935.2_03121 | 0 | 13 | 0.592575 | hypothetical protein | |
| GCF_000783935.2_03122 | 1 | 13 | -0.253622 | hypothetical protein | |
| GCF_000783935.2_03123 | 1 | 19 | -0.176424 | Pyrrolidone-carboxylate peptidase | |
| GCF_000783935.2_03124 | 1 | 21 | -1.283655 | Endonuclease 8 | |
| GCF_000783935.2_03125 | 3 | 27 | -1.321431 | Citrate synthase | |
| GCF_000783935.2_03126 | 2 | 25 | -0.775055 | Succinate dehydrogenase cytochrome b556 subunit | |
| GCF_000783935.2_03127 | 2 | 28 | -0.462123 | Succinate dehydrogenase hydrophobic membrane | |
| GCF_000783935.2_03128 | 1 | 29 | -0.236938 | Succinate dehydrogenase flavoprotein subunit | |
| GCF_000783935.2_03129 | 2 | 29 | -0.842111 | Succinate dehydrogenase iron-sulfur subunit | |
| GCF_000783935.2_03130 | 2 | 30 | -0.942936 | 2-oxoglutarate dehydrogenase E1 component | |
| GCF_000783935.2_03131 | 0 | 31 | -1.322349 | Dihydrolipoyllysine-residue succinyltransferase | |
| GCF_000783935.2_03132 | 0 | 31 | -1.811089 | Succinate--CoA ligase [ADP-forming] subunit | |
| GCF_000783935.2_03133 | 0 | 26 | -2.339729 | Succinate--CoA ligase [ADP-forming] subunit | |
| GCF_000783935.2_03134 | 2 | 25 | -3.217231 | hypothetical protein | |
| GCF_000783935.2_03135 | 2 | 24 | -3.214066 | Cytochrome bd-I ubiquinol oxidase subunit 1 | |
| GCF_000783935.2_03136 | 1 | 22 | -3.235939 | Cytochrome bd-I ubiquinol oxidase subunit 2 | |
| GCF_000783935.2_03137 | 9 | 22 | -1.767179 | Cytochrome bd-I ubiquinol oxidase subunit X | |
| GCF_000783935.2_03138 | 4 | 22 | -1.147426 | hypothetical protein | |
| GCF_000783935.2_03139 | 4 | 26 | -1.357241 | Acyl-CoA thioester hydrolase YbgC | |
| GCF_000783935.2_03140 | 3 | 23 | -1.266433 | Tol-Pal system protein TolQ | |
| GCF_000783935.2_03141 | 3 | 22 | -0.739151 | Tol-Pal system protein TolR | |
| GCF_000783935.2_03142 | 2 | 20 | -0.852883 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 100 | 3e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PHPHTRNFRASE | 47 | 3e-08 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPD | 31 | 0.014 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 85 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 34 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BACINVASINB | 30 | 0.017 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETOQM | 32 | 0.002 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 31 | 0.011 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | IGASERPTASE | 63 | 1e-12 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 42 | GCF_000783935.2_03165 | GCF_000783935.2_03189 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03165 | 1 | 13 | 3.099414 | Sulfate/thiosulfate import ATP-binding protein | |
| GCF_000783935.2_03166 | -1 | 12 | 3.156078 | Pyridoxal phosphate phosphatase YbhA | |
| GCF_000783935.2_03167 | 0 | 13 | 3.635504 | 6-phosphogluconolactonase | |
| GCF_000783935.2_03168 | 3 | 14 | 4.188246 | hypothetical protein | |
| GCF_000783935.2_03169 | 3 | 18 | 3.093221 | ECF RNA polymerase sigma factor SigF | |
| GCF_000783935.2_03170 | 0 | 17 | 3.184044 | Thiol:disulfide interchange protein DsbD | |
| GCF_000783935.2_03171 | -1 | 15 | 2.639331 | Peroxiredoxin | |
| GCF_000783935.2_03172 | 0 | 13 | 3.705866 | hypothetical protein | |
| GCF_000783935.2_03173 | -1 | 12 | 3.312525 | hypothetical protein | |
| GCF_000783935.2_03174 | -1 | 12 | 3.521573 | hypothetical protein | |
| GCF_000783935.2_03175 | -1 | 13 | 4.193068 | Putative acyl-CoA thioester hydrolase YbhC | |
| GCF_000783935.2_03176 | -1 | 14 | 3.873638 | Imidazolonepropionase | |
| GCF_000783935.2_03177 | -1 | 14 | 3.904127 | Formimidoylglutamase | |
| GCF_000783935.2_03178 | 0 | 14 | 3.657356 | HTH-type transcriptional repressor NagR | |
| GCF_000783935.2_03179 | -1 | 16 | 3.740209 | Urocanate hydratase | |
| GCF_000783935.2_03180 | 0 | 17 | 4.801935 | Histidine ammonia-lyase | |
| GCF_000783935.2_03181 | 2 | 17 | 5.285437 | Proline-specific permease ProY | |
| GCF_000783935.2_03182 | 1 | 16 | 6.415520 | hypothetical protein | |
| GCF_000783935.2_03183 | 1 | 15 | 6.049634 | Adenosylmethionine-8-amino-7-oxononanoate | |
| GCF_000783935.2_03184 | 1 | 17 | 4.819851 | Biotin synthase | |
| GCF_000783935.2_03185 | 2 | 18 | 5.082136 | 8-amino-7-oxononanoate synthase | |
| GCF_000783935.2_03186 | 3 | 18 | 3.139560 | Malonyl-[acyl-carrier protein] | |
| GCF_000783935.2_03187 | 2 | 16 | 1.927464 | ATP-dependent dethiobiotin synthetase BioD 1 | |
| GCF_000783935.2_03188 | 2 | 13 | 0.010114 | High-affinity branched-chain amino acid | |
| GCF_000783935.2_03189 | 2 | 13 | -0.226125 | UvrABC system protein B |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SYCDCHAPRONE | 36 | 2e-05 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | UREASE | 30 | 0.021 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 43 | GCF_000783935.2_03242 | GCF_000783935.2_03264 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03242 | -1 | 16 | 3.146419 | Sugar phosphatase YbiV | |
| GCF_000783935.2_03243 | -1 | 13 | 3.929725 | Trans-4-hydroxy-L-proline dehydratase | |
| GCF_000783935.2_03244 | -1 | 14 | 3.601139 | Choline trimethylamine-lyase activating enzyme | |
| GCF_000783935.2_03245 | -1 | 15 | 3.894359 | Molybdopterin-synthase adenylyltransferase | |
| GCF_000783935.2_03246 | -1 | 17 | 3.660684 | Molybdopterin molybdenumtransferase | |
| GCF_000783935.2_03247 | -1 | 15 | 2.597767 | Isoaspartyl peptidase | |
| GCF_000783935.2_03248 | -2 | 14 | -1.991577 | Glutathione import ATP-binding protein GsiA | |
| GCF_000783935.2_03249 | 0 | 18 | -4.706211 | Glutathione-binding protein GsiB | |
| GCF_000783935.2_03250 | 1 | 28 | -8.774038 | Glutathione transport system permease protein | |
| GCF_000783935.2_03251 | 3 | 37 | -11.659317 | Glutathione transport system permease protein | |
| GCF_000783935.2_03252 | 5 | 45 | -14.153103 | Ribosomal protein S12 methylthiotransferase | |
| GCF_000783935.2_03253 | 8 | 61 | -20.151802 | hypothetical protein | |
| GCF_000783935.2_03254 | 8 | 64 | -22.125409 | hypothetical protein | |
| GCF_000783935.2_03255 | 8 | 65 | -22.670586 | hypothetical protein | |
| GCF_000783935.2_03256 | 7 | 67 | -22.738440 | hypothetical protein | |
| GCF_000783935.2_03257 | 8 | 67 | -23.252366 | hypothetical protein | |
| GCF_000783935.2_03258 | 8 | 67 | -23.731485 | Chromosome partition protein Smc | |
| GCF_000783935.2_03259 | 6 | 70 | -23.357070 | hypothetical protein | |
| GCF_000783935.2_03260 | 2 | 49 | -17.811797 | hypothetical protein | |
| GCF_000783935.2_03261 | 1 | 43 | -14.703004 | Putative transposon Tn552 DNA-invertase bin3 | |
| GCF_000783935.2_03262 | 1 | 31 | -10.190643 | hypothetical protein | |
| GCF_000783935.2_03263 | 1 | 21 | -5.330190 | hypothetical protein | |
| GCF_000783935.2_03264 | -1 | 15 | -3.407818 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF08280 | 31 | 0.009 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF07520 | 33 | 7e-04 | Virulence protein SrfB | |
>PF07520#Virulence protein SrfB | |||||
| 44 | GCF_000783935.2_03291 | GCF_000783935.2_03301 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03291 | -1 | 16 | -3.415571 | Transcriptional regulatory protein WalR | |
| GCF_000783935.2_03292 | -1 | 17 | -3.677116 | Adaptive-response sensory-kinase SasA | |
| GCF_000783935.2_03293 | 1 | 19 | -5.247533 | ABC transporter arginine-binding protein 1 | |
| GCF_000783935.2_03294 | 0 | 19 | -4.883047 | Arabinose 5-phosphate isomerase KdsD | |
| GCF_000783935.2_03295 | 0 | 17 | -4.183094 | Glucitol operon repressor | |
| GCF_000783935.2_03296 | -1 | 15 | -3.292784 | D-erythronate kinase | |
| GCF_000783935.2_03297 | 0 | 11 | -1.908269 | D-erythronate 4-phosphate dehydrogenase | |
| GCF_000783935.2_03298 | -1 | 13 | -1.693601 | High-affinity gluconate transporter | |
| GCF_000783935.2_03299 | -1 | 14 | -2.122073 | Arginine ABC transporter permease protein ArtM | |
| GCF_000783935.2_03300 | 0 | 15 | -3.202193 | Arginine ABC transporter permease protein ArtQ | |
| GCF_000783935.2_03301 | 0 | 17 | -3.050369 | Putative ABC transporter arginine-binding |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 90 | 8e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 42 | 3e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ARGREPRESSOR | 34 | 3e-04 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| 45 | GCF_000783935.2_03352 | GCF_000783935.2_03361 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03352 | 3 | 13 | 1.187258 | hypothetical protein | |
| GCF_000783935.2_03353 | 3 | 12 | 0.972520 | hypothetical protein | |
| GCF_000783935.2_03354 | 2 | 11 | 0.340327 | tRNA 5-carboxymethoxyuridine methyltransferase | |
| GCF_000783935.2_03355 | 3 | 11 | 0.462941 | Chromosome partition protein MukF | |
| GCF_000783935.2_03356 | 2 | 11 | 0.555997 | Chromosome partition protein MukE | |
| GCF_000783935.2_03357 | 1 | 14 | 0.164768 | Chromosome partition protein MukB | |
| GCF_000783935.2_03358 | 0 | 18 | -1.346705 | putative L,D-transpeptidase YcbB | |
| GCF_000783935.2_03359 | 1 | 23 | -1.870085 | hypothetical protein | |
| GCF_000783935.2_03360 | 2 | 21 | -0.515795 | Hydroxyacylglutathione hydrolase GloC | |
| GCF_000783935.2_03361 | 2 | 20 | -0.081326 | Aspartate aminotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | GPOSANCHOR | 41 | 3e-05 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 46 | GCF_000783935.2_03394 | GCF_000783935.2_03434 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03394 | 0 | 17 | -3.856550 | hypothetical protein | |
| GCF_000783935.2_03395 | 1 | 16 | -4.658625 | Acylphosphatase | |
| GCF_000783935.2_03396 | 0 | 16 | -2.988919 | Sulfurtransferase TusE | |
| GCF_000783935.2_03397 | -1 | 16 | -1.794146 | Modulator of FtsH protease YccA | |
| GCF_000783935.2_03398 | -1 | 16 | -2.268611 | Periplasmic oligopeptide-binding protein | |
| GCF_000783935.2_03400 | -1 | 21 | -3.159335 | *hypothetical protein | |
| GCF_000783935.2_03402 | -1 | 21 | -2.499809 | *hypothetical protein | |
| GCF_000783935.2_03403 | -1 | 22 | -2.663107 | Multidrug resistance protein MdtA | |
| GCF_000783935.2_03404 | 0 | 24 | -4.257093 | Nickel and cobalt resistance protein CnrA | |
| GCF_000783935.2_03405 | 0 | 29 | -6.902665 | hypothetical protein | |
| GCF_000783935.2_03406 | 0 | 18 | -2.990757 | hypothetical protein | |
| GCF_000783935.2_03407 | -1 | 14 | 0.164992 | hypothetical protein | |
| GCF_000783935.2_03408 | 1 | 15 | -0.492334 | hypothetical protein | |
| GCF_000783935.2_03409 | 0 | 14 | -0.047098 | hypothetical protein | |
| GCF_000783935.2_03410 | 0 | 14 | 0.165203 | Fe(3+)-binding periplasmic protein | |
| GCF_000783935.2_03411 | 0 | 18 | 0.374784 | hypothetical protein | |
| GCF_000783935.2_03412 | 3 | 21 | -1.873586 | Fe(3+) ions import ATP-binding protein FbpC | |
| GCF_000783935.2_03413 | 2 | 20 | -2.056055 | hypothetical protein | |
| GCF_000783935.2_03414 | 0 | 15 | 1.678304 | hypothetical protein | |
| GCF_000783935.2_03415 | 0 | 16 | 2.591140 | hypothetical protein | |
| GCF_000783935.2_03416 | 0 | 15 | 3.000494 | hypothetical protein | |
| GCF_000783935.2_03417 | -1 | 16 | 3.927389 | hypothetical protein | |
| GCF_000783935.2_03418 | -1 | 17 | 4.163765 | Phenoxybenzoate dioxygenase subunit beta | |
| GCF_000783935.2_03419 | -1 | 17 | 3.442106 | Methylxanthine N1-demethylase NdmA | |
| GCF_000783935.2_03420 | -1 | 16 | 3.209559 | HTH-type transcriptional regulator HdfR | |
| GCF_000783935.2_03421 | 0 | 17 | 3.606482 | FAD-dependent urate hydroxylase | |
| GCF_000783935.2_03422 | 1 | 17 | 3.903400 | Uric acid degradation bifunctional protein | |
| GCF_000783935.2_03423 | 0 | 17 | 3.528042 | 5-hydroxyisourate hydrolase | |
| GCF_000783935.2_03424 | -1 | 18 | 3.544348 | Guanine deaminase | |
| GCF_000783935.2_03425 | -1 | 17 | 5.055747 | putative allantoin permease | |
| GCF_000783935.2_03426 | 0 | 16 | 5.898793 | hypothetical protein | |
| GCF_000783935.2_03427 | -1 | 17 | 6.934862 | Hydantoin racemase | |
| GCF_000783935.2_03428 | 0 | 16 | 6.344435 | hypothetical protein | |
| GCF_000783935.2_03429 | 0 | 15 | 5.881646 | hypothetical protein | |
| GCF_000783935.2_03430 | 0 | 14 | 5.783627 | 1-carboxybiuret hydrolase subunit AtzE | |
| GCF_000783935.2_03431 | 1 | 16 | 4.575650 | hypothetical protein | |
| GCF_000783935.2_03432 | 1 | 17 | 4.165154 | Oxamate amidohydrolase proenzyme | |
| GCF_000783935.2_03433 | 1 | 22 | 2.703985 | hypothetical protein | |
| GCF_000783935.2_03434 | 1 | 21 | 4.398868 | ABC transporter glutamine-binding protein GlnH |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 67 | 4e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 40 | 9e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 451 | e-144 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 38 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 28 | 0.041 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPD | 35 | 3e-04 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| 47 | GCF_000783935.2_03458 | GCF_000783935.2_03473 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03458 | -1 | 14 | 4.169943 | hypothetical protein | |
| GCF_000783935.2_03459 | -2 | 16 | 4.588495 | hypothetical protein | |
| GCF_000783935.2_03460 | -2 | 17 | 3.757435 | hypothetical protein | |
| GCF_000783935.2_03461 | 0 | 16 | 3.161754 | Dihydroanticapsin 7-dehydrogenase | |
| GCF_000783935.2_03462 | 0 | 16 | 1.746196 | putative HTH-type transcriptional regulator | |
| GCF_000783935.2_03463 | 0 | 15 | 1.463611 | hypothetical protein | |
| GCF_000783935.2_03464 | 0 | 14 | 1.655094 | hypothetical protein | |
| GCF_000783935.2_03465 | 0 | 13 | 2.088994 | Glucose-1-phosphatase | |
| GCF_000783935.2_03466 | 0 | 17 | 2.902816 | putative protein YccJ | |
| GCF_000783935.2_03467 | -1 | 15 | 4.768689 | NAD(P)H dehydrogenase (quinone) | |
| GCF_000783935.2_03468 | 0 | 16 | 4.795492 | hypothetical protein | |
| GCF_000783935.2_03469 | -1 | 18 | 4.761769 | Putative pyrimidine permease RutG | |
| GCF_000783935.2_03470 | -1 | 23 | 4.331608 | FMN reductase (NADH) RutF | |
| GCF_000783935.2_03471 | -1 | 20 | 3.519348 | putative malonic semialdehyde reductase RutE | |
| GCF_000783935.2_03472 | -1 | 19 | 3.366756 | Putative aminoacrylate hydrolase RutD | |
| GCF_000783935.2_03473 | -1 | 20 | 3.556539 | Putative aminoacrylate peracid reductase RutC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 118 | 2e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 78 | 3e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | LIPPROTEIN48 | 27 | 0.037 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| 48 | GCF_000783935.2_03486 | GCF_000783935.2_03502 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03486 | 3 | 24 | -2.661936 | Putative metabolite transport protein YjhB | |
| GCF_000783935.2_03487 | 5 | 32 | -4.050715 | hypothetical protein | |
| GCF_000783935.2_03488 | 5 | 29 | -3.445313 | hypothetical protein | |
| GCF_000783935.2_03489 | 4 | 24 | -1.790912 | hypothetical protein | |
| GCF_000783935.2_03490 | 4 | 24 | -1.506487 | Outer membrane usher protein FimD | |
| GCF_000783935.2_03491 | 3 | 26 | -2.276790 | putative fimbrial chaperone LpfB | |
| GCF_000783935.2_03492 | 3 | 26 | -2.521910 | hypothetical protein | |
| GCF_000783935.2_03494 | 1 | 24 | -1.565779 | *putative hydrolase YcaC | |
| GCF_000783935.2_03495 | 2 | 26 | -1.795910 | hypothetical protein | |
| GCF_000783935.2_03496 | 1 | 30 | -3.056187 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_03497 | 2 | 32 | -4.583473 | hypothetical protein | |
| GCF_000783935.2_03498 | 1 | 29 | -3.346749 | hypothetical protein | |
| GCF_000783935.2_03499 | 0 | 24 | -2.361864 | 3-phenylpropionate-dihydrodiol/cinnamic | |
| GCF_000783935.2_03500 | -1 | 24 | -2.015050 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
| GCF_000783935.2_03501 | 0 | 21 | -1.391790 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_03502 | 2 | 18 | -0.597882 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 48 | 5e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 562 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ISCHRISMTASE | 34 | 3e-04 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 76 | 2e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 84 | 1e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 49 | GCF_000783935.2_03583 | GCF_000783935.2_03614 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03583 | 2 | 18 | -1.051696 | Virulence transcriptional regulatory protein | |
| GCF_000783935.2_03584 | 2 | 18 | -0.584618 | hypothetical protein | |
| GCF_000783935.2_03585 | 1 | 21 | -0.522338 | Adenylosuccinate lyase | |
| GCF_000783935.2_03586 | 1 | 17 | -1.611092 | High frequency lysogenization protein HflD | |
| GCF_000783935.2_03587 | 1 | 20 | -3.470036 | tRNA-specific 2-thiouridylase MnmA | |
| GCF_000783935.2_03588 | -1 | 26 | -6.701592 | Phosphatase NudJ | |
| GCF_000783935.2_03589 | 0 | 31 | -8.724382 | Ribosomal large subunit pseudouridine synthase | |
| GCF_000783935.2_03590 | 2 | 34 | -10.419643 | Isocitrate dehydrogenase [NADP] | |
| GCF_000783935.2_03591 | 4 | 47 | -14.534278 | hypothetical protein | |
| GCF_000783935.2_03592 | 2 | 44 | -12.628750 | hypothetical protein | |
| GCF_000783935.2_03593 | 4 | 39 | -11.191867 | hypothetical protein | |
| GCF_000783935.2_03594 | 4 | 31 | -6.546478 | hypothetical protein | |
| GCF_000783935.2_03595 | 3 | 27 | -3.438624 | Protein PhoH | |
| GCF_000783935.2_03596 | 2 | 28 | -3.687255 | hypothetical protein | |
| GCF_000783935.2_03598 | 1 | 28 | -3.039307 | *hypothetical protein | |
| GCF_000783935.2_03599 | 1 | 27 | -4.011499 | hypothetical protein | |
| GCF_000783935.2_03600 | 2 | 32 | -5.949160 | hypothetical protein | |
| GCF_000783935.2_03601 | 1 | 37 | -7.419349 | Riboflavin transporter RfnT | |
| GCF_000783935.2_03602 | 1 | 39 | -8.209047 | hypothetical protein | |
| GCF_000783935.2_03603 | 1 | 39 | -8.342090 | hypothetical protein | |
| GCF_000783935.2_03604 | 0 | 36 | -8.416992 | Homoserine/homoserine lactone efflux protein | |
| GCF_000783935.2_03605 | 0 | 38 | -8.161564 | hypothetical protein | |
| GCF_000783935.2_03606 | 1 | 31 | -7.287424 | hypothetical protein | |
| GCF_000783935.2_03607 | 1 | 27 | -7.709010 | Glycine cleavage system transcriptional | |
| GCF_000783935.2_03608 | 2 | 28 | -6.800350 | hypothetical protein | |
| GCF_000783935.2_03609 | 2 | 27 | -6.113072 | hypothetical protein | |
| GCF_000783935.2_03610 | 1 | 25 | -6.418090 | putative N-acetyltransferase YycN | |
| GCF_000783935.2_03611 | 1 | 25 | -6.886444 | 2-hydroxypropyl-CoM lyase | |
| GCF_000783935.2_03612 | 1 | 25 | -5.054850 | hypothetical protein | |
| GCF_000783935.2_03613 | 1 | 18 | 0.061459 | hypothetical protein | |
| GCF_000783935.2_03614 | 2 | 17 | -2.141298 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 90 | 6e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 27 | 0.023 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 67 | 2e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 50 | GCF_000783935.2_03628 | GCF_000783935.2_03655 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03628 | 0 | 12 | 3.722252 | hypothetical protein | |
| GCF_000783935.2_03629 | -1 | 12 | 3.389269 | hypothetical protein | |
| GCF_000783935.2_03630 | 0 | 12 | 3.538120 | hypothetical protein | |
| GCF_000783935.2_03631 | 1 | 12 | 0.332078 | CTP synthase | |
| GCF_000783935.2_03632 | 1 | 15 | -0.330008 | 2-nitroimidazole transporter | |
| GCF_000783935.2_03633 | 0 | 13 | -3.706805 | HTH-type transcriptional regulator NimR | |
| GCF_000783935.2_03634 | 0 | 16 | -4.706269 | hypothetical protein | |
| GCF_000783935.2_03635 | 0 | 14 | -4.821236 | hypothetical protein | |
| GCF_000783935.2_03636 | 1 | 12 | -5.061934 | hypothetical protein | |
| GCF_000783935.2_03637 | 3 | 12 | -3.895250 | hypothetical protein | |
| GCF_000783935.2_03638 | 2 | 10 | -2.855861 | Maltoporin | |
| GCF_000783935.2_03639 | 1 | 12 | -2.078511 | hypothetical protein | |
| GCF_000783935.2_03640 | 1 | 9 | -2.013540 | hypothetical protein | |
| GCF_000783935.2_03641 | 2 | 15 | -2.476734 | hypothetical protein | |
| GCF_000783935.2_03642 | 1 | 17 | -2.062383 | MltA-interacting protein | |
| GCF_000783935.2_03643 | 1 | 18 | -2.251326 | putative oxidoreductase/MSMEI_2347 | |
| GCF_000783935.2_03644 | 2 | 17 | -2.947038 | Putative malate transporter YflS | |
| GCF_000783935.2_03645 | 3 | 22 | -3.300264 | Putative glucose-6-phosphate 1-epimerase | |
| GCF_000783935.2_03646 | 1 | 19 | -4.093663 | Glyceraldehyde-3-phosphate dehydrogenase A | |
| GCF_000783935.2_03647 | 1 | 15 | -3.880006 | Peptide methionine sulfoxide reductase MsrB | |
| GCF_000783935.2_03648 | 1 | 15 | -4.210253 | hypothetical protein | |
| GCF_000783935.2_03649 | 2 | 16 | -4.755742 | Chitinase A1 | |
| GCF_000783935.2_03650 | 1 | 19 | -5.268304 | D-arabitol-phosphate dehydrogenase | |
| GCF_000783935.2_03651 | 2 | 23 | -6.540571 | Inner membrane metabolite transport protein | |
| GCF_000783935.2_03652 | 2 | 23 | -6.733100 | putative zinc-type alcohol dehydrogenase-like | |
| GCF_000783935.2_03653 | 1 | 21 | -6.049803 | putative protein YdjI | |
| GCF_000783935.2_03654 | 0 | 19 | -5.215378 | putative sugar kinase YdjH | |
| GCF_000783935.2_03655 | -1 | 11 | -3.040598 | NADH-specific methylglyoxal reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 32 | 0.006 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 51 | GCF_000783935.2_03665 | GCF_000783935.2_03687 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03665 | 0 | 12 | 3.171747 | Selenide, water dikinase | |
| GCF_000783935.2_03666 | 0 | 12 | 3.458784 | DNA topoisomerase 3 | |
| GCF_000783935.2_03667 | 0 | 14 | 5.351009 | NADP-specific glutamate dehydrogenase | |
| GCF_000783935.2_03668 | 1 | 16 | 6.642170 | CTP pyrophosphohydrolase | |
| GCF_000783935.2_03669 | 1 | 14 | 6.519390 | Inner membrane protein YnjF | |
| GCF_000783935.2_03670 | 1 | 12 | 6.092254 | Thiosulfate sulfurtransferase YnjE | |
| GCF_000783935.2_03671 | 1 | 14 | 5.575381 | Fe(3+) ions import ATP-binding protein FbpC 2 | |
| GCF_000783935.2_03672 | 1 | 13 | 4.547223 | Inner membrane ABC transporter permease protein | |
| GCF_000783935.2_03673 | -2 | 13 | 3.115369 | Protein YnjB | |
| GCF_000783935.2_03674 | -2 | 10 | 1.594159 | hypothetical protein | |
| GCF_000783935.2_03675 | -1 | 11 | 2.436488 | TVP38/TMEM64 family inner membrane protein YdjZ | |
| GCF_000783935.2_03676 | -1 | 13 | 3.176081 | hypothetical protein | |
| GCF_000783935.2_03677 | -1 | 14 | 3.468901 | Exodeoxyribonuclease III | |
| GCF_000783935.2_03678 | -1 | 15 | 3.223265 | Succinylornithine transaminase | |
| GCF_000783935.2_03679 | 0 | 18 | 3.578841 | Arginine N-succinyltransferase | |
| GCF_000783935.2_03680 | 0 | 18 | 3.113266 | N-succinylglutamate 5-semialdehyde | |
| GCF_000783935.2_03681 | -1 | 16 | 1.712290 | N-succinylarginine dihydrolase | |
| GCF_000783935.2_03682 | 1 | 13 | -0.399547 | Succinylglutamate desuccinylase | |
| GCF_000783935.2_03683 | -1 | 12 | -1.887682 | Periplasmic chaperone Spy | |
| GCF_000783935.2_03684 | 0 | 12 | -1.584800 | Excinuclease cho | |
| GCF_000783935.2_03685 | -1 | 14 | -5.086200 | NH(3)-dependent NAD(+) synthetase | |
| GCF_000783935.2_03686 | -2 | 13 | -5.109415 | Osmotically-inducible putative lipoprotein OsmE | |
| GCF_000783935.2_03687 | -1 | 13 | -4.073598 | PTS system N,N'-diacetylchitobiose-specific EIIB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TYPE3IMSPROT | 29 | 0.019 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 28 | 0.024 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DNABINDINGHU | 34 | 2e-04 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 52 | GCF_000783935.2_03703 | GCF_000783935.2_03708 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03703 | 0 | 23 | -5.666690 | hypothetical protein | |
| GCF_000783935.2_03704 | 0 | 31 | -7.704601 | hypothetical protein | |
| GCF_000783935.2_03705 | 1 | 28 | -7.023475 | Outer membrane protein W | |
| GCF_000783935.2_03706 | 0 | 28 | -5.578707 | hypothetical protein | |
| GCF_000783935.2_03707 | 0 | 26 | -4.043927 | Transcriptional repressor RcnR | |
| GCF_000783935.2_03708 | -1 | 24 | -3.620118 | hypothetical protein |
| 53 | GCF_000783935.2_03755 | GCF_000783935.2_03811 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03755 | 2 | 13 | 2.778259 | Protein Ves | |
| GCF_000783935.2_03756 | 1 | 14 | 2.069028 | Octopine-binding periplasmic protein | |
| GCF_000783935.2_03757 | 3 | 16 | 2.592042 | Octopine transport system permease protein OccQ | |
| GCF_000783935.2_03758 | 3 | 16 | 2.184967 | Octopine transport system permease protein OccM | |
| GCF_000783935.2_03759 | 3 | 15 | 2.543409 | Octopine permease ATP-binding protein P | |
| GCF_000783935.2_03760 | 3 | 15 | 2.912179 | Histidine ammonia-lyase | |
| GCF_000783935.2_03761 | 0 | 15 | 2.000514 | hypothetical protein | |
| GCF_000783935.2_03762 | 0 | 16 | 1.992310 | Peptide transport system ATP-binding protein | |
| GCF_000783935.2_03763 | -2 | 14 | 1.416153 | Peptide transport system ATP-binding protein | |
| GCF_000783935.2_03764 | -3 | 14 | 2.427972 | Peptide transport system permease protein SapC | |
| GCF_000783935.2_03765 | -2 | 12 | 2.126378 | Putrescine export system permease protein SapB | |
| GCF_000783935.2_03766 | -1 | 13 | 2.651184 | Peptide transport periplasmic protein SapA | |
| GCF_000783935.2_03767 | -1 | 13 | 2.795226 | hypothetical protein | |
| GCF_000783935.2_03768 | 0 | 12 | 3.225764 | hypothetical protein | |
| GCF_000783935.2_03769 | 0 | 13 | 3.680260 | Aurachin B dehydrogenase | |
| GCF_000783935.2_03770 | 1 | 12 | 2.669374 | hypothetical protein | |
| GCF_000783935.2_03771 | 2 | 12 | 2.296017 | HTH-type transcriptional activator RhaR | |
| GCF_000783935.2_03772 | 1 | 16 | 1.359433 | Hippurate hydrolase | |
| GCF_000783935.2_03773 | 4 | 17 | 1.185328 | Quinolone resistance protein NorB | |
| GCF_000783935.2_03774 | 5 | 17 | 1.120771 | Psp operon transcriptional activator | |
| GCF_000783935.2_03775 | 4 | 19 | 2.055192 | Phage shock protein A | |
| GCF_000783935.2_03776 | 1 | 14 | 2.977290 | Phage shock protein B | |
| GCF_000783935.2_03777 | 1 | 16 | 3.637134 | Phage shock protein C | |
| GCF_000783935.2_03778 | 1 | 15 | 3.723073 | Phage shock protein D | |
| GCF_000783935.2_03779 | 1 | 15 | 4.059070 | putative protein YcjX | |
| GCF_000783935.2_03780 | 0 | 14 | 4.591732 | hypothetical protein | |
| GCF_000783935.2_03781 | -2 | 12 | 2.401653 | Transcriptional regulatory protein TyrR | |
| GCF_000783935.2_03782 | -1 | 13 | -0.362445 | hypothetical protein | |
| GCF_000783935.2_03783 | 0 | 12 | -1.876163 | Thiol peroxidase | |
| GCF_000783935.2_03784 | 0 | 15 | -2.275321 | L-Ala-D/L-Glu epimerase | |
| GCF_000783935.2_03785 | 0 | 13 | -3.949329 | Murein peptide amidase A | |
| GCF_000783935.2_03786 | 0 | 16 | -5.934664 | Periplasmic murein peptide-binding protein | |
| GCF_000783935.2_03787 | 0 | 22 | -6.084447 | hypothetical protein | |
| GCF_000783935.2_03788 | 0 | 21 | -2.973848 | hypothetical protein | |
| GCF_000783935.2_03789 | 0 | 23 | -3.683306 | Protein UmuD | |
| GCF_000783935.2_03790 | 0 | 27 | -4.409187 | Protein UmuC | |
| GCF_000783935.2_03791 | 0 | 33 | -5.295197 | hypothetical protein | |
| GCF_000783935.2_03792 | 0 | 31 | -5.091143 | hypothetical protein | |
| GCF_000783935.2_03793 | -1 | 29 | -5.381345 | HTH-type transcriptional regulator HdfR | |
| GCF_000783935.2_03794 | 1 | 26 | -5.635573 | Multiple antibiotic resistance protein MarA | |
| GCF_000783935.2_03795 | 1 | 26 | -5.177587 | Multiple stress resistance protein BhsA | |
| GCF_000783935.2_03796 | 3 | 25 | -4.711323 | hypothetical protein | |
| GCF_000783935.2_03797 | 3 | 25 | -4.291906 | HTH-type transcriptional regulator PgrR | |
| GCF_000783935.2_03798 | 3 | 24 | -3.135580 | Aldo-keto reductase IolS | |
| GCF_000783935.2_03799 | 3 | 29 | -4.437736 | Glyoxal reductase | |
| GCF_000783935.2_03800 | 3 | 36 | -5.654930 | hypothetical protein | |
| GCF_000783935.2_03801 | 3 | 37 | -5.419601 | hypothetical protein | |
| GCF_000783935.2_03802 | 2 | 38 | -5.944798 | hypothetical protein | |
| GCF_000783935.2_03803 | 2 | 37 | -6.262640 | 4-hydroxy-tetrahydrodipicolinate synthase | |
| GCF_000783935.2_03804 | 2 | 36 | -6.957135 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_03805 | 1 | 33 | -5.952244 | putative oxidoreductase | |
| GCF_000783935.2_03806 | -1 | 31 | -4.589910 | hypothetical protein | |
| GCF_000783935.2_03807 | -1 | 28 | -3.470301 | hypothetical protein | |
| GCF_000783935.2_03808 | 0 | 27 | -3.011542 | HTH-type transcriptional regulator PgrR | |
| GCF_000783935.2_03809 | 1 | 28 | -2.693266 | Diacetyl reductase [(S)-acetoin forming] | |
| GCF_000783935.2_03810 | 1 | 28 | -3.228921 | hypothetical protein | |
| GCF_000783935.2_03811 | 1 | 31 | -3.708385 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 31 | 0.007 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 41 | 2e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 90 | 2e-21 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 348 | e-120 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 29 | 0.018 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 310 | e-102 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 29 | 0.026 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 39 | 9e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 115 | 2e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 120 | 5e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 63 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 54 | GCF_000783935.2_03821 | GCF_000783935.2_03883 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03821 | 0 | 25 | -4.225531 | hypothetical protein | |
| GCF_000783935.2_03822 | 0 | 21 | -3.293448 | hypothetical protein | |
| GCF_000783935.2_03823 | 1 | 26 | -2.581059 | hypothetical protein | |
| GCF_000783935.2_03824 | -1 | 26 | -2.478294 | hypothetical protein | |
| GCF_000783935.2_03825 | 0 | 24 | -2.939146 | hypothetical protein | |
| GCF_000783935.2_03826 | -1 | 23 | -3.727631 | hypothetical protein | |
| GCF_000783935.2_03827 | -1 | 21 | -1.903151 | hypothetical protein | |
| GCF_000783935.2_03828 | 0 | 18 | -1.428957 | Adaptive-response sensory-kinase SasA | |
| GCF_000783935.2_03829 | -1 | 14 | 0.030933 | Transcriptional activator protein CzcR | |
| GCF_000783935.2_03830 | -2 | 12 | 1.045250 | hypothetical protein | |
| GCF_000783935.2_03831 | -2 | 11 | 2.087271 | putative protein YcjY | |
| GCF_000783935.2_03832 | -1 | 12 | 3.286538 | NADP-dependent alcohol dehydrogenase C 2 | |
| GCF_000783935.2_03833 | 0 | 15 | 0.524706 | HTH-type transcriptional activator RhaS | |
| GCF_000783935.2_03834 | 1 | 16 | -0.570084 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |
| GCF_000783935.2_03835 | 2 | 21 | -2.914650 | Colistin resistance protein EmrB | |
| GCF_000783935.2_03836 | 2 | 27 | -4.757982 | Colistin resistance protein EmrA | |
| GCF_000783935.2_03837 | 2 | 34 | -6.847536 | hypothetical protein | |
| GCF_000783935.2_03838 | 3 | 37 | -7.588990 | hypothetical protein | |
| GCF_000783935.2_03839 | 0 | 30 | -5.691274 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_03840 | 0 | 30 | -5.523363 | Threonine efflux protein | |
| GCF_000783935.2_03841 | 0 | 31 | -5.505144 | N-ethylmaleimide reductase | |
| GCF_000783935.2_03842 | 2 | 36 | -7.213438 | Quercetin 2,3-dioxygenase | |
| GCF_000783935.2_03843 | 2 | 37 | -7.146751 | putative hydrolase YcaC | |
| GCF_000783935.2_03844 | 2 | 37 | -7.472699 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_03845 | 3 | 34 | -6.845921 | hypothetical protein | |
| GCF_000783935.2_03846 | 2 | 32 | -5.984333 | hypothetical protein | |
| GCF_000783935.2_03847 | 1 | 25 | -4.777426 | hypothetical protein | |
| GCF_000783935.2_03848 | 1 | 19 | -2.693085 | 2-iminobutanoate/2-iminopropanoate deaminase | |
| GCF_000783935.2_03849 | 0 | 19 | -2.444109 | Transcriptional regulator DauR | |
| GCF_000783935.2_03850 | 0 | 20 | -1.859493 | putative isomerase YddE | |
| GCF_000783935.2_03851 | 1 | 24 | -3.007224 | Branched-chain amino acid transport system 2 | |
| GCF_000783935.2_03852 | 1 | 26 | -3.181395 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_03853 | -1 | 16 | -0.889727 | N-ethylmaleimide reductase | |
| GCF_000783935.2_03854 | 0 | 17 | -2.537156 | putative oxidoreductase | |
| GCF_000783935.2_03855 | -1 | 14 | -1.273401 | hypothetical protein | |
| GCF_000783935.2_03856 | 0 | 13 | -1.184594 | putative HTH-type transcriptional regulator | |
| GCF_000783935.2_03857 | 0 | 11 | 0.166242 | hypothetical protein | |
| GCF_000783935.2_03858 | 0 | 11 | -0.599739 | 1,4-alpha-glucan branching enzyme GlgB | |
| GCF_000783935.2_03859 | 1 | 11 | -2.940478 | Glucose-1-phosphate adenylyltransferase | |
| GCF_000783935.2_03860 | 0 | 12 | -4.620045 | Glycogen synthase | |
| GCF_000783935.2_03861 | 0 | 15 | -7.156024 | Maltodextrin phosphorylase | |
| GCF_000783935.2_03862 | 1 | 28 | -10.845065 | Phosphoglucomutase | |
| GCF_000783935.2_03863 | 5 | 45 | -15.296902 | hypothetical protein | |
| GCF_000783935.2_03864 | 5 | 42 | -14.135329 | Sucrose permease | |
| GCF_000783935.2_03865 | 6 | 52 | -15.443703 | hypothetical protein | |
| GCF_000783935.2_03866 | 5 | 52 | -13.692001 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
| GCF_000783935.2_03867 | 6 | 47 | -12.086143 | hypothetical protein | |
| GCF_000783935.2_03868 | 2 | 22 | 1.126038 | Peroxyureidoacrylate/ureidoacrylate | |
| GCF_000783935.2_03869 | 2 | 22 | -0.360832 | putative protein YyaP | |
| GCF_000783935.2_03870 | 2 | 24 | -0.040452 | hypothetical protein | |
| GCF_000783935.2_03871 | 2 | 24 | -0.813873 | hypothetical protein | |
| GCF_000783935.2_03872 | 2 | 26 | 2.670848 | hypothetical protein | |
| GCF_000783935.2_03873 | 2 | 28 | 3.297278 | 16S rRNA endonuclease CdiA | |
| GCF_000783935.2_03874 | 1 | 24 | 0.075378 | hypothetical protein | |
| GCF_000783935.2_03875 | 1 | 24 | -3.331641 | hypothetical protein | |
| GCF_000783935.2_03876 | 1 | 25 | -5.466941 | hypothetical protein | |
| GCF_000783935.2_03877 | 1 | 25 | -5.288672 | 16S rRNA endonuclease CdiA | |
| GCF_000783935.2_03878 | -1 | 19 | -0.384940 | hypothetical protein | |
| GCF_000783935.2_03879 | -1 | 19 | -0.118663 | hypothetical protein | |
| GCF_000783935.2_03880 | -1 | 18 | 0.639283 | hypothetical protein | |
| GCF_000783935.2_03881 | -2 | 21 | 3.518491 | hypothetical protein | |
| GCF_000783935.2_03882 | -1 | 24 | 5.101510 | hypothetical protein | |
| GCF_000783935.2_03883 | -1 | 24 | 5.275915 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05616 | 29 | 0.026 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 88 | 3e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 98 | 6e-24 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 107 | 4e-28 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 30 | 0.016 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TONBPROTEIN | 57 | 3e-13 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 68 | 8e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPD | 31 | 0.014 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 112 | 6e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ISCHRISMTASE | 37 | 2e-05 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ICENUCLEATIN | 31 | 0.028 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06057 | 36 | 1e-04 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ICENUCLEATIN | 35 | 0.003 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05860 | 86 | 1e-21 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| 55 | GCF_000783935.2_03915 | GCF_000783935.2_03946 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03915 | 0 | 17 | 4.747722 | Bifunctional protein PaaZ | |
| GCF_000783935.2_03916 | 1 | 18 | 4.845215 | 1,2-phenylacetyl-CoA epoxidase, subunit A | |
| GCF_000783935.2_03917 | 1 | 19 | 5.471086 | 1,2-phenylacetyl-CoA epoxidase, subunit B | |
| GCF_000783935.2_03918 | 0 | 18 | 6.246713 | 1,2-phenylacetyl-CoA epoxidase, subunit C | |
| GCF_000783935.2_03919 | 0 | 19 | 6.093837 | Putative 1,2-phenylacetyl-CoA epoxidase, subunit | |
| GCF_000783935.2_03920 | 1 | 18 | 6.037916 | 1,2-phenylacetyl-CoA epoxidase, subunit E | |
| GCF_000783935.2_03921 | -2 | 14 | 5.131531 | 2,3-dehydroadipyl-CoA hydratase | |
| GCF_000783935.2_03922 | -1 | 13 | 4.760146 | 1,2-epoxyphenylacetyl-CoA isomerase | |
| GCF_000783935.2_03923 | -1 | 15 | 4.074188 | 3-hydroxyadipyl-CoA dehydrogenase | |
| GCF_000783935.2_03924 | -1 | 14 | 2.608071 | Acyl-coenzyme A thioesterase PaaI | |
| GCF_000783935.2_03925 | -1 | 14 | 1.991234 | 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA | |
| GCF_000783935.2_03926 | 0 | 13 | 1.604161 | Phenylacetate-coenzyme A ligase | |
| GCF_000783935.2_03927 | 0 | 13 | 2.489027 | Transcriptional repressor PaaX | |
| GCF_000783935.2_03928 | -1 | 13 | 2.314881 | Protein YrdA | |
| GCF_000783935.2_03929 | -1 | 14 | 2.468691 | FMN-dependent NADH-azoreductase | |
| GCF_000783935.2_03930 | -1 | 15 | 2.661080 | hypothetical protein | |
| GCF_000783935.2_03931 | -2 | 13 | 3.204926 | Catechol O-methyltransferase | |
| GCF_000783935.2_03932 | -3 | 14 | 3.157930 | Outer membrane protein OprM | |
| GCF_000783935.2_03933 | -2 | 14 | 2.304117 | Colistin resistance protein EmrA | |
| GCF_000783935.2_03934 | -1 | 13 | 3.253489 | hypothetical protein | |
| GCF_000783935.2_03935 | -1 | 13 | 3.264744 | Transcriptional regulator SlyA | |
| GCF_000783935.2_03936 | 0 | 13 | 3.543528 | Glutamate dehydrogenase | |
| GCF_000783935.2_03937 | 0 | 15 | 3.343310 | Succinylornithine transaminase | |
| GCF_000783935.2_03938 | -1 | 15 | 4.136954 | Arginine N-succinyltransferase | |
| GCF_000783935.2_03939 | -1 | 16 | 4.206391 | N-succinylglutamate 5-semialdehyde | |
| GCF_000783935.2_03940 | -2 | 15 | 2.839186 | N-succinylarginine dihydrolase | |
| GCF_000783935.2_03941 | -1 | 13 | 2.933214 | Succinylglutamate desuccinylase | |
| GCF_000783935.2_03942 | 0 | 13 | 2.837982 | D-serine/D-alanine/glycine transporter | |
| GCF_000783935.2_03943 | 1 | 14 | 3.860550 | Protein YdcF | |
| GCF_000783935.2_03944 | 1 | 13 | 2.362945 | Lactaldehyde dehydrogenase | |
| GCF_000783935.2_03945 | 1 | 13 | 1.582239 | Glyceraldehyde-3-phosphate dehydrogenase | |
| GCF_000783935.2_03946 | 2 | 15 | 1.350258 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | LIPPROTEIN48 | 29 | 0.016 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 37 | 1e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 105 | 4e-27 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 56 | GCF_000783935.2_03960 | GCF_000783935.2_03967 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03960 | 2 | 14 | 1.989972 | hypothetical protein | |
| GCF_000783935.2_03961 | 1 | 14 | 2.177482 | Transcriptional repressor FrmR | |
| GCF_000783935.2_03962 | 0 | 14 | 3.491668 | S-(hydroxymethyl)glutathione dehydrogenase | |
| GCF_000783935.2_03963 | -2 | 15 | 4.362249 | HTH-type transcriptional regulator GbpR | |
| GCF_000783935.2_03964 | -1 | 16 | 4.166534 | Protocatechuate 3,4-dioxygenase alpha chain | |
| GCF_000783935.2_03965 | -2 | 14 | 3.967665 | Protocatechuate 3,4-dioxygenase beta chain | |
| GCF_000783935.2_03966 | -2 | 13 | 3.684859 | hypothetical protein | |
| GCF_000783935.2_03967 | -1 | 15 | 3.288547 | Para-nitrobenzyl esterase |
| 57 | GCF_000783935.2_04021 | GCF_000783935.2_04030 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04021 | 2 | 18 | 2.662148 | Pyrimidine-specific ribonucleoside hydrolase | |
| GCF_000783935.2_04022 | 2 | 17 | 2.433735 | Fe(3+) dicitrate transport protein FecA | |
| GCF_000783935.2_04023 | 0 | 16 | 2.249526 | putative protein YncE | |
| GCF_000783935.2_04024 | 0 | 14 | 4.058357 | putative lipoprotein YgdR | |
| GCF_000783935.2_04025 | -1 | 15 | 4.948698 | L-asparagine permease 2 | |
| GCF_000783935.2_04026 | 0 | 16 | 4.411646 | HTH-type transcriptional regulator PgrR | |
| GCF_000783935.2_04027 | 1 | 16 | 4.043111 | hypothetical protein | |
| GCF_000783935.2_04028 | 1 | 15 | 4.122728 | hypothetical protein | |
| GCF_000783935.2_04029 | 1 | 16 | 3.908917 | hypothetical protein | |
| GCF_000783935.2_04030 | 0 | 19 | 3.030063 | N-acetylcysteine deacetylase |
| 58 | GCF_000783935.2_04039 | GCF_000783935.2_04054 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04039 | 0 | 14 | 3.268039 | Tautomerase PptA | |
| GCF_000783935.2_04040 | -1 | 15 | 3.613815 | HTH-type transcriptional regulator BenM | |
| GCF_000783935.2_04041 | -1 | 13 | 4.236036 | Putative tartrate transporter | |
| GCF_000783935.2_04042 | 0 | 14 | 4.662408 | putative tartrate dehydrogenase/decarboxylase | |
| GCF_000783935.2_04043 | 0 | 17 | 5.440202 | Putative hydroxypyruvate reductase | |
| GCF_000783935.2_04044 | 0 | 15 | 4.335711 | hypothetical protein | |
| GCF_000783935.2_04045 | -1 | 15 | 3.525966 | hypothetical protein | |
| GCF_000783935.2_04046 | 0 | 16 | 3.330199 | Maltose/maltodextrin import ATP-binding protein | |
| GCF_000783935.2_04047 | 0 | 17 | 3.495787 | hypothetical protein | |
| GCF_000783935.2_04048 | 1 | 18 | 2.556349 | hypothetical protein | |
| GCF_000783935.2_04049 | -1 | 19 | -0.051807 | Arylamine N-acetyltransferase | |
| GCF_000783935.2_04050 | 3 | 16 | 1.621310 | hypothetical protein | |
| GCF_000783935.2_04051 | 2 | 14 | 3.036146 | hypothetical protein | |
| GCF_000783935.2_04052 | 2 | 11 | 3.461731 | HTH-type transcriptional regulator HdfR | |
| GCF_000783935.2_04053 | 2 | 11 | 2.378928 | hypothetical protein | |
| GCF_000783935.2_04054 | 2 | 11 | 2.675397 | HTH-type transcriptional regulator BetI |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 31 | 0.012 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05932 | 26 | 0.037 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 48 | 4e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 59 | GCF_000783935.2_04068 | GCF_000783935.2_04075 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04068 | 2 | 13 | 2.324885 | Formate dehydrogenase, nitrate-inducible, | |
| GCF_000783935.2_04069 | 1 | 13 | 3.994682 | hypothetical protein | |
| GCF_000783935.2_04070 | 0 | 14 | 4.500150 | Polyphosphate:ADP phosphotransferase 3 | |
| GCF_000783935.2_04071 | -1 | 15 | 6.017586 | hypothetical protein | |
| GCF_000783935.2_04072 | -2 | 14 | 5.428419 | Putative transporter AraJ | |
| GCF_000783935.2_04073 | -1 | 14 | 5.056126 | hypothetical protein | |
| GCF_000783935.2_04074 | -1 | 14 | 4.316955 | F420-dependent glucose-6-phosphate | |
| GCF_000783935.2_04075 | -1 | 14 | 3.410557 | Glutathione import ATP-binding protein GsiA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 56 | 8e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 60 | GCF_000783935.2_04109 | GCF_000783935.2_04150 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04109 | -1 | 13 | 3.478908 | hypothetical protein | |
| GCF_000783935.2_04110 | -1 | 12 | 3.116064 | Ferrichrome receptor FcuA | |
| GCF_000783935.2_04111 | -2 | 13 | 3.091219 | Cell division protein ZapE | |
| GCF_000783935.2_04112 | -2 | 18 | 3.334379 | Catalase-peroxidase | |
| GCF_000783935.2_04113 | -2 | 18 | 2.990460 | hypothetical protein | |
| GCF_000783935.2_04114 | -2 | 15 | 5.254222 | hypothetical protein | |
| GCF_000783935.2_04115 | -2 | 15 | 6.001109 | Bicarbonate transport ATP-binding protein CmpD | |
| GCF_000783935.2_04116 | -1 | 15 | 4.769808 | hypothetical protein | |
| GCF_000783935.2_04117 | -1 | 14 | 4.958296 | hypothetical protein | |
| GCF_000783935.2_04118 | -1 | 14 | 4.838994 | hypothetical protein | |
| GCF_000783935.2_04119 | 0 | 13 | 4.517312 | D-alanine--D-alanine ligase | |
| GCF_000783935.2_04120 | 0 | 12 | 3.640493 | Allophanate hydrolase | |
| GCF_000783935.2_04121 | 0 | 12 | 2.631828 | Peptidoglycan D,D-transpeptidase MrdA | |
| GCF_000783935.2_04122 | 1 | 12 | 3.742138 | hypothetical protein | |
| GCF_000783935.2_04123 | -1 | 12 | 3.117897 | Haloalkane dehalogenase | |
| GCF_000783935.2_04124 | -1 | 12 | 2.654393 | Transcriptional regulatory protein OmpR | |
| GCF_000783935.2_04125 | 0 | 13 | 3.064519 | Sensor histidine kinase RcsC | |
| GCF_000783935.2_04126 | 0 | 14 | 3.234094 | Protein DipZ | |
| GCF_000783935.2_04127 | 0 | 15 | 3.308101 | L-2,4-diaminobutyrate decarboxylase | |
| GCF_000783935.2_04128 | -2 | 10 | 2.181738 | Diaminobutyrate--2-oxoglutarate | |
| GCF_000783935.2_04129 | 0 | 13 | 0.987020 | Putative thiamine biosynthesis protein | |
| GCF_000783935.2_04130 | 1 | 14 | 1.397005 | Riboflavin transport system permease protein | |
| GCF_000783935.2_04131 | 2 | 16 | -1.115424 | Aliphatic sulfonates import ATP-binding protein | |
| GCF_000783935.2_04132 | 3 | 16 | -1.591233 | Aminopyrimidine aminohydrolase | |
| GCF_000783935.2_04133 | 3 | 17 | -2.162720 | hypothetical protein | |
| GCF_000783935.2_04134 | 2 | 17 | -1.853715 | hypothetical protein | |
| GCF_000783935.2_04135 | 0 | 16 | -0.490144 | hypothetical protein | |
| GCF_000783935.2_04136 | -1 | 17 | -1.526555 | Diguanylate cyclase DgcM | |
| GCF_000783935.2_04137 | -1 | 16 | 1.376383 | Trans-aconitate 2-methyltransferase | |
| GCF_000783935.2_04138 | -1 | 12 | 1.204562 | hypothetical protein | |
| GCF_000783935.2_04139 | 0 | 12 | 1.103485 | hypothetical protein | |
| GCF_000783935.2_04140 | 0 | 12 | 0.643898 | hypothetical protein | |
| GCF_000783935.2_04141 | 1 | 13 | 0.605738 | Antitoxin HipB | |
| GCF_000783935.2_04142 | 2 | 16 | 0.722096 | Serine/threonine-protein kinase toxin HipA | |
| GCF_000783935.2_04143 | 2 | 17 | 0.493582 | hypothetical protein | |
| GCF_000783935.2_04144 | 2 | 19 | 0.257805 | Leu/Ile/Val-binding protein | |
| GCF_000783935.2_04145 | 2 | 21 | 0.103107 | High-affinity branched-chain amino acid | |
| GCF_000783935.2_04146 | 2 | 19 | 0.548252 | hypothetical protein | |
| GCF_000783935.2_04147 | 2 | 18 | 0.390299 | Glutamine transport ATP-binding protein GlnQ | |
| GCF_000783935.2_04148 | 0 | 17 | 0.574852 | High-affinity branched-chain amino acid | |
| GCF_000783935.2_04149 | 1 | 16 | 0.324629 | 2-hydroxy-3-oxopropionate reductase | |
| GCF_000783935.2_04150 | 2 | 19 | 0.213239 | HTH-type transcriptional repressor GlcR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 32 | 0.012 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 97 | 2e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 61 | GCF_000783935.2_04159 | GCF_000783935.2_04176 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04159 | 0 | 21 | -4.077993 | Inhibitor of vertebrate lysozyme | |
| GCF_000783935.2_04160 | 0 | 19 | -4.174356 | RNA polymerase sigma factor RpoH | |
| GCF_000783935.2_04161 | -1 | 14 | -3.770332 | Miniconductance mechanosensitive channel YbdG | |
| GCF_000783935.2_04162 | -2 | 14 | -1.431827 | Protein HdeD | |
| GCF_000783935.2_04163 | 0 | 16 | -1.593084 | hypothetical protein | |
| GCF_000783935.2_04164 | -1 | 17 | -1.583000 | hypothetical protein | |
| GCF_000783935.2_04165 | -1 | 17 | -1.323236 | hypothetical protein | |
| GCF_000783935.2_04166 | -1 | 17 | -1.226102 | Gallate decarboxylase | |
| GCF_000783935.2_04167 | -2 | 22 | -2.177280 | Flavin prenyltransferase UbiX | |
| GCF_000783935.2_04168 | 1 | 30 | -4.671859 | putative membrane protein YdfK | |
| GCF_000783935.2_04169 | 2 | 36 | -6.519287 | Isopentenyl-diphosphate Delta-isomerase | |
| GCF_000783935.2_04170 | 3 | 40 | -8.673503 | hypothetical protein | |
| GCF_000783935.2_04171 | 3 | 37 | -8.298246 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
| GCF_000783935.2_04172 | 3 | 38 | -9.129343 | hypothetical protein | |
| GCF_000783935.2_04173 | 3 | 36 | -8.590744 | Quinone oxidoreductase 2 | |
| GCF_000783935.2_04174 | 2 | 33 | -8.321166 | Acetyl esterase | |
| GCF_000783935.2_04175 | 2 | 32 | -7.673265 | hypothetical protein | |
| GCF_000783935.2_04176 | 0 | 28 | -4.353706 | Low affinity potassium transport system protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 67 | 2e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 28 | 0.037 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 62 | GCF_000783935.2_04250 | GCF_000783935.2_04341 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04250 | -1 | 19 | -4.454137 | hypothetical protein | |
| GCF_000783935.2_04251 | -1 | 21 | -5.244701 | Colicin I receptor | |
| GCF_000783935.2_04252 | -1 | 25 | -5.049548 | putative protein YncE | |
| GCF_000783935.2_04253 | 1 | 20 | -3.477565 | hypothetical protein | |
| GCF_000783935.2_04254 | 0 | 20 | -3.020571 | hypothetical protein | |
| GCF_000783935.2_04255 | 1 | 18 | -2.101316 | Cysteine/O-acetylserine efflux protein | |
| GCF_000783935.2_04256 | 1 | 19 | -3.243005 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_04257 | 0 | 18 | -2.615542 | putative amino-acid metabolite efflux pump | |
| GCF_000783935.2_04258 | 1 | 19 | -3.529384 | Na(+), Li(+), K(+)/H(+) antiporter | |
| GCF_000783935.2_04259 | 2 | 27 | -5.713607 | hypothetical protein | |
| GCF_000783935.2_04260 | 2 | 29 | -5.923321 | Type IV secretion system protein virB1 | |
| GCF_000783935.2_04261 | 1 | 29 | -7.457782 | hypothetical protein | |
| GCF_000783935.2_04262 | 1 | 25 | -4.087009 | hypothetical protein | |
| GCF_000783935.2_04263 | 1 | 22 | -2.890810 | hypothetical protein | |
| GCF_000783935.2_04264 | 1 | 23 | -3.109914 | hypothetical protein | |
| GCF_000783935.2_04265 | 1 | 20 | -2.788294 | hypothetical protein | |
| GCF_000783935.2_04266 | 0 | 21 | -3.262295 | hypothetical protein | |
| GCF_000783935.2_04267 | 1 | 23 | -4.147141 | hypothetical protein | |
| GCF_000783935.2_04268 | 0 | 20 | -4.935099 | hypothetical protein | |
| GCF_000783935.2_04269 | 0 | 18 | -3.883518 | hypothetical protein | |
| GCF_000783935.2_04270 | 0 | 18 | -3.657539 | hypothetical protein | |
| GCF_000783935.2_04271 | -2 | 16 | -2.926996 | hypothetical protein | |
| GCF_000783935.2_04272 | -2 | 17 | -3.061814 | hypothetical protein | |
| GCF_000783935.2_04273 | -2 | 14 | -2.470029 | hypothetical protein | |
| GCF_000783935.2_04274 | -2 | 14 | -1.554364 | hypothetical protein | |
| GCF_000783935.2_04275 | -1 | 15 | -1.429614 | hypothetical protein | |
| GCF_000783935.2_04276 | 0 | 12 | -0.533360 | Type 3 secretion system secretin | |
| GCF_000783935.2_04277 | 1 | 14 | 1.959350 | hypothetical protein | |
| GCF_000783935.2_04278 | 1 | 14 | 2.509474 | hypothetical protein | |
| GCF_000783935.2_04279 | 0 | 14 | 2.830412 | High-affinity branched-chain amino acid | |
| GCF_000783935.2_04280 | 0 | 13 | 3.263112 | Energy-coupling factor transporter ATP-binding | |
| GCF_000783935.2_04281 | -1 | 13 | 3.419968 | hypothetical protein | |
| GCF_000783935.2_04282 | -1 | 14 | 3.398120 | hypothetical protein | |
| GCF_000783935.2_04283 | 0 | 15 | 1.492723 | Aliphatic amidase expression-regulating protein | |
| GCF_000783935.2_04284 | 0 | 15 | 2.093856 | hypothetical protein | |
| GCF_000783935.2_04285 | 2 | 20 | 2.041777 | hypothetical protein | |
| GCF_000783935.2_04286 | 6 | 22 | -1.570743 | HTH-type transcriptional activator RhaS | |
| GCF_000783935.2_04287 | 10 | 28 | -3.891060 | hypothetical protein | |
| GCF_000783935.2_04288 | 7 | 29 | -5.867266 | hypothetical protein | |
| GCF_000783935.2_04289 | 6 | 31 | -5.828095 | hypothetical protein | |
| GCF_000783935.2_04290 | 6 | 31 | -5.728195 | DNA-invertase hin | |
| GCF_000783935.2_04291 | 7 | 34 | -7.095508 | hypothetical protein | |
| GCF_000783935.2_04292 | 5 | 34 | -6.511627 | hypothetical protein | |
| GCF_000783935.2_04293 | 5 | 34 | -6.254197 | hypothetical protein | |
| GCF_000783935.2_04294 | 4 | 32 | -3.661459 | Prophage tail fiber assembly protein TfaE | |
| GCF_000783935.2_04295 | 5 | 28 | -3.223292 | hypothetical protein | |
| GCF_000783935.2_04296 | 4 | 25 | -3.259652 | hypothetical protein | |
| GCF_000783935.2_04297 | 4 | 22 | -1.765172 | hypothetical protein | |
| GCF_000783935.2_04298 | 2 | 21 | -1.136036 | hypothetical protein | |
| GCF_000783935.2_04299 | 2 | 20 | -1.070003 | hypothetical protein | |
| GCF_000783935.2_04300 | 1 | 19 | -1.498810 | hypothetical protein | |
| GCF_000783935.2_04301 | 2 | 22 | -1.432491 | hypothetical protein | |
| GCF_000783935.2_04302 | 2 | 19 | -1.085624 | hypothetical protein | |
| GCF_000783935.2_04303 | 2 | 19 | -0.579846 | hypothetical protein | |
| GCF_000783935.2_04304 | 4 | 21 | -0.757745 | hypothetical protein | |
| GCF_000783935.2_04305 | 3 | 22 | -1.090759 | hypothetical protein | |
| GCF_000783935.2_04306 | 4 | 25 | -1.672265 | hypothetical protein | |
| GCF_000783935.2_04307 | 4 | 25 | -1.842511 | hypothetical protein | |
| GCF_000783935.2_04308 | 4 | 27 | -2.453053 | hypothetical protein | |
| GCF_000783935.2_04309 | 3 | 32 | -2.847742 | hypothetical protein | |
| GCF_000783935.2_04310 | 0 | 28 | -3.761260 | hypothetical protein | |
| GCF_000783935.2_04311 | 1 | 26 | -3.288742 | hypothetical protein | |
| GCF_000783935.2_04312 | 1 | 25 | -3.198435 | hypothetical protein | |
| GCF_000783935.2_04313 | 0 | 23 | -3.575212 | hypothetical protein | |
| GCF_000783935.2_04314 | 0 | 25 | -3.811363 | hypothetical protein | |
| GCF_000783935.2_04315 | 0 | 23 | -3.884220 | hypothetical protein | |
| GCF_000783935.2_04316 | 0 | 23 | -3.198015 | hypothetical protein | |
| GCF_000783935.2_04317 | -1 | 24 | -3.845235 | hypothetical protein | |
| GCF_000783935.2_04318 | 0 | 26 | -4.228096 | hypothetical protein | |
| GCF_000783935.2_04319 | 1 | 34 | -3.866419 | hypothetical protein | |
| GCF_000783935.2_04320 | 2 | 34 | -4.765046 | hypothetical protein | |
| GCF_000783935.2_04321 | 3 | 42 | -7.514441 | Lysozyme RrrD | |
| GCF_000783935.2_04322 | 4 | 44 | -8.782402 | hypothetical protein | |
| GCF_000783935.2_04323 | 2 | 38 | -7.172495 | hypothetical protein | |
| GCF_000783935.2_04324 | 1 | 39 | -7.613181 | hypothetical protein | |
| GCF_000783935.2_04325 | 1 | 37 | -7.678362 | hypothetical protein | |
| GCF_000783935.2_04326 | 3 | 33 | -6.470911 | hypothetical protein | |
| GCF_000783935.2_04327 | 2 | 26 | -4.315163 | hypothetical protein | |
| GCF_000783935.2_04328 | 2 | 30 | -4.864668 | hypothetical protein | |
| GCF_000783935.2_04329 | 4 | 32 | -6.155391 | hypothetical protein | |
| GCF_000783935.2_04330 | 2 | 35 | -7.448995 | hypothetical protein | |
| GCF_000783935.2_04331 | 2 | 37 | -8.229678 | hypothetical protein | |
| GCF_000783935.2_04332 | 2 | 47 | -10.339965 | hypothetical protein | |
| GCF_000783935.2_04333 | 4 | 51 | -12.760329 | hypothetical protein | |
| GCF_000783935.2_04334 | 4 | 41 | -10.073255 | hypothetical protein | |
| GCF_000783935.2_04335 | 4 | 42 | -9.806357 | hypothetical protein | |
| GCF_000783935.2_04336 | 5 | 42 | -8.608953 | hypothetical protein | |
| GCF_000783935.2_04337 | 5 | 42 | -8.559298 | hypothetical protein | |
| GCF_000783935.2_04338 | 3 | 37 | -6.877344 | hypothetical protein | |
| GCF_000783935.2_04339 | 2 | 32 | -4.334960 | Putative defective protein IntQ | |
| GCF_000783935.2_04340 | 1 | 25 | -3.673984 | hypothetical protein | |
| GCF_000783935.2_04341 | 0 | 26 | -3.859230 | Putative selenoprotein YdfZ |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 46 | 2e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TYPE3OMBPROT | 27 | 0.029 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PREPILNPTASE | 32 | 5e-04 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPD | 140 | 3e-38 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CHLAMIDIAOM6 | 28 | 0.021 | Chlamydia cysteine-rich outer membrane protein 6 si... | |
>CHLAMIDIAOM6#Chlamydia cysteine-rich outer membrane protein 6 | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | YERSSTKINASE | 27 | 0.040 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SURFACELAYER | 30 | 0.006 | Lactobacillus surface layer protein signature. | |
>SURFACELAYER#Lactobacillus surface layer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ARGDEIMINASE | 31 | 4e-04 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| 63 | GCF_000783935.2_04351 | GCF_000783935.2_04372 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04351 | 1 | 20 | -3.415519 | hypothetical protein | |
| GCF_000783935.2_04352 | -1 | 19 | -1.966679 | Inner membrane protein YagU | |
| GCF_000783935.2_04353 | -1 | 13 | 2.537803 | hypothetical protein | |
| GCF_000783935.2_04354 | -2 | 11 | 1.694754 | hypothetical protein | |
| GCF_000783935.2_04355 | -1 | 10 | 1.500440 | hypothetical protein | |
| GCF_000783935.2_04356 | -2 | 11 | 1.886563 | hypothetical protein | |
| GCF_000783935.2_04357 | -2 | 11 | 2.498916 | Lactose operon repressor | |
| GCF_000783935.2_04358 | -1 | 13 | 1.681700 | Beta-galactosidase | |
| GCF_000783935.2_04359 | 2 | 16 | -1.710143 | Lactose permease | |
| GCF_000783935.2_04360 | 1 | 13 | 0.726171 | hypothetical protein | |
| GCF_000783935.2_04361 | 0 | 13 | 0.487651 | hypothetical protein | |
| GCF_000783935.2_04362 | -1 | 13 | 0.229247 | Beta-lactamase TEM | |
| GCF_000783935.2_04363 | -1 | 17 | -1.902486 | hypothetical protein | |
| GCF_000783935.2_04364 | 0 | 16 | -1.963202 | hypothetical protein | |
| GCF_000783935.2_04365 | -1 | 12 | -0.311220 | Dipeptidyl carboxypeptidase | |
| GCF_000783935.2_04366 | -2 | 16 | -2.915416 | hypothetical protein | |
| GCF_000783935.2_04367 | -2 | 17 | -3.164118 | NADP-dependent 3-hydroxy acid dehydrogenase | |
| GCF_000783935.2_04368 | -2 | 20 | -3.325940 | HTH-type transcriptional repressor RspR | |
| GCF_000783935.2_04369 | -2 | 18 | -2.440204 | Universal stress protein UP12 | |
| GCF_000783935.2_04370 | -2 | 17 | -2.386902 | Polyol:NADP oxidoreductase | |
| GCF_000783935.2_04371 | 0 | 18 | -4.124228 | Putative transporter YdfJ | |
| GCF_000783935.2_04372 | 0 | 15 | -3.276794 | Starvation-sensing protein RspB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TONBPROTEIN | 81 | 3e-22 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 41 | 5e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BLACTAMASEA | 379 | e-135 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 95 | 2e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 47 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 64 | GCF_000783935.2_04397 | GCF_000783935.2_04403 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04397 | -1 | 17 | 3.419088 | AI-2 transport protein TqsA | |
| GCF_000783935.2_04398 | 0 | 19 | 4.741571 | AB hydrolase superfamily protein YdjP | |
| GCF_000783935.2_04399 | 0 | 21 | 5.012062 | Acetyl-S-ACP:malonate ACP transferase | |
| GCF_000783935.2_04400 | 2 | 20 | 6.086703 | 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A | |
| GCF_000783935.2_04401 | 0 | 18 | 5.917871 | Malonate decarboxylase acyl carrier protein | |
| GCF_000783935.2_04402 | -2 | 15 | 4.867419 | Malonyl-S-ACP:biotin-protein carboxyltransferase | |
| GCF_000783935.2_04403 | -1 | 11 | 3.870346 | Malonyl-S-ACP:biotin-protein carboxyltransferase |
| 65 | GCF_000783935.2_04419 | GCF_000783935.2_04433 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04419 | 1 | 13 | 3.591139 | Multiple antibiotic resistance protein MarR | |
| GCF_000783935.2_04420 | 1 | 12 | 4.364942 | hypothetical protein | |
| GCF_000783935.2_04421 | 2 | 13 | 4.915630 | hypothetical protein | |
| GCF_000783935.2_04422 | 1 | 14 | 5.100401 | 3-oxoadipate enol-lactonase 2 | |
| GCF_000783935.2_04423 | 2 | 15 | 4.977766 | 3-carboxy-cis,cis-muconate cycloisomerase | |
| GCF_000783935.2_04424 | 0 | 13 | 3.304027 | Beta-ketoadipyl-CoA thiolase | |
| GCF_000783935.2_04425 | -1 | 13 | 2.939832 | 3-oxoadipate CoA-transferase subunit B | |
| GCF_000783935.2_04426 | -1 | 12 | 3.438539 | 3-oxoadipate CoA-transferase subunit A | |
| GCF_000783935.2_04427 | -2 | 13 | 2.754097 | Pca regulon regulatory protein | |
| GCF_000783935.2_04428 | -1 | 14 | 2.020016 | putative DNA endonuclease SmrA | |
| GCF_000783935.2_04429 | -1 | 14 | 1.593503 | HTH-type transcriptional regulator TsaR | |
| GCF_000783935.2_04430 | 0 | 14 | 2.099178 | Indole-3-acetyl-aspartic acid hydrolase | |
| GCF_000783935.2_04431 | 0 | 12 | -0.005909 | p-aminobenzoyl-glutamate hydrolase subunit B | |
| GCF_000783935.2_04432 | 0 | 13 | -2.232330 | p-aminobenzoyl-glutamate transport protein | |
| GCF_000783935.2_04433 | 0 | 20 | -3.664964 | hypothetical protein |
| 66 | GCF_000783935.2_04462 | GCF_000783935.2_04467 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04462 | 2 | 15 | -4.810312 | Low-affinity inorganic phosphate transporter 1 | |
| GCF_000783935.2_04463 | 2 | 16 | -5.357310 | Putative selenoprotein YdfZ | |
| GCF_000783935.2_04464 | 1 | 14 | -4.169202 | hypothetical protein | |
| GCF_000783935.2_04465 | 1 | 14 | -4.350708 | Putative sulfur carrier protein YedF | |
| GCF_000783935.2_04466 | 0 | 14 | -4.476753 | D-methionine-binding lipoprotein MetQ | |
| GCF_000783935.2_04467 | 0 | 14 | -4.161114 | putative diguanylate cyclase DgcJ |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF01206 | 90 | 4e-28 | SirA family protein | |
>PF01206#SirA family protein | |||||
| 67 | GCF_000783935.2_04512 | GCF_000783935.2_04522 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04512 | 2 | 18 | 1.015447 | hypothetical protein | |
| GCF_000783935.2_04513 | 2 | 20 | 0.766250 | hypothetical protein | |
| GCF_000783935.2_04517 | 1 | 19 | 1.504634 | ***Putative metal chaperone YciC | |
| GCF_000783935.2_04518 | 2 | 19 | 2.509624 | hypothetical protein | |
| GCF_000783935.2_04519 | 1 | 21 | 2.335345 | Putative cysteine protease YraA | |
| GCF_000783935.2_04520 | 2 | 21 | 2.195089 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
| GCF_000783935.2_04521 | 2 | 19 | 2.232968 | hypothetical protein | |
| GCF_000783935.2_04522 | 2 | 18 | 2.427693 | HTH-type transcriptional regulator PgrR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 27 | 0.045 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 93 | 8e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 68 | GCF_000783935.2_04555 | GCF_000783935.2_04594 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04555 | 1 | 13 | 3.381936 | Arsenate reductase | |
| GCF_000783935.2_04556 | 0 | 14 | 3.738822 | Arsenical pump membrane protein | |
| GCF_000783935.2_04557 | -1 | 17 | 3.448123 | hypothetical protein | |
| GCF_000783935.2_04558 | -2 | 17 | 3.620116 | NADPH-dependent FMN reductase ArsH | |
| GCF_000783935.2_04559 | -2 | 20 | 3.073004 | hypothetical protein | |
| GCF_000783935.2_04560 | -2 | 21 | 2.985449 | Dibenzothiophene desulfurization enzyme C | |
| GCF_000783935.2_04561 | -2 | 20 | 2.517448 | Methionine import system permease protein MetP | |
| GCF_000783935.2_04562 | -2 | 19 | 3.172599 | Membrane lipoprotein TpN32 | |
| GCF_000783935.2_04563 | -2 | 19 | 3.610444 | Methionine import ATP-binding protein MetN | |
| GCF_000783935.2_04564 | -1 | 16 | 3.178188 | Oligopeptide-binding protein AppA | |
| GCF_000783935.2_04565 | -2 | 15 | 1.729658 | Dipeptide transport system permease protein | |
| GCF_000783935.2_04566 | -2 | 13 | 1.421943 | Glutathione transport system permease protein | |
| GCF_000783935.2_04567 | -2 | 13 | 0.705570 | Dipeptide transport ATP-binding protein DppD | |
| GCF_000783935.2_04568 | -1 | 12 | -0.113351 | Oligopeptide transport ATP-binding protein OppF | |
| GCF_000783935.2_04569 | -1 | 12 | -0.103602 | Quinate/shikimate dehydrogenase (quinone) | |
| GCF_000783935.2_04570 | 2 | 16 | -0.940777 | hypothetical protein | |
| GCF_000783935.2_04571 | 0 | 21 | 4.787594 | hypothetical protein | |
| GCF_000783935.2_04572 | 0 | 20 | 5.919995 | hypothetical protein | |
| GCF_000783935.2_04573 | -2 | 18 | 5.412246 | HTH-type transcriptional regulator GltC | |
| GCF_000783935.2_04574 | -2 | 17 | 5.266827 | putative succinyl-CoA:3-ketoacid coenzyme A | |
| GCF_000783935.2_04575 | -1 | 16 | 4.741615 | putative succinyl-CoA:3-ketoacid coenzyme A | |
| GCF_000783935.2_04576 | -1 | 15 | 4.202211 | Acetyl-CoA acetyltransferase | |
| GCF_000783935.2_04577 | 1 | 13 | 2.360713 | 3-hydroxybutyryl-CoA dehydrogenase | |
| GCF_000783935.2_04578 | 0 | 13 | 1.237744 | hypothetical protein | |
| GCF_000783935.2_04579 | 0 | 14 | 2.374806 | D-beta-hydroxybutyrate dehydrogenase | |
| GCF_000783935.2_04580 | 1 | 17 | 2.464896 | Cold shock-like protein CspB | |
| GCF_000783935.2_04581 | 0 | 16 | 3.856160 | hypothetical protein | |
| GCF_000783935.2_04582 | 0 | 16 | 4.313314 | HTH-type transcriptional regulator BenM | |
| GCF_000783935.2_04583 | -1 | 20 | 4.879784 | Alpha-acetolactate decarboxylase | |
| GCF_000783935.2_04584 | -1 | 19 | 5.565037 | Acetolactate synthase, catabolic | |
| GCF_000783935.2_04585 | 0 | 19 | 5.664498 | Diacetyl reductase [(S)-acetoin forming] | |
| GCF_000783935.2_04586 | 3 | 21 | 6.154013 | hypothetical protein | |
| GCF_000783935.2_04587 | 2 | 21 | 5.334584 | hypothetical protein | |
| GCF_000783935.2_04588 | 2 | 22 | 5.963629 | Thiol:disulfide interchange protein DsbE | |
| GCF_000783935.2_04589 | 2 | 22 | 6.487638 | Cytochrome c-type biogenesis protein CcmF | |
| GCF_000783935.2_04590 | 0 | 20 | 6.098834 | Cytochrome c-type biogenesis protein CcmE | |
| GCF_000783935.2_04591 | -1 | 16 | 4.842620 | hypothetical protein | |
| GCF_000783935.2_04592 | -1 | 14 | 4.268803 | Heme exporter protein C | |
| GCF_000783935.2_04593 | -1 | 15 | 4.154692 | Heme exporter protein B | |
| GCF_000783935.2_04594 | -1 | 15 | 3.064831 | Cytochrome c biogenesis ATP-binding export |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF07520 | 29 | 0.027 | Virulence protein SrfB | |
>PF07520#Virulence protein SrfB | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 106 | 6e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 119 | 1e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PYOCINKILLER | 30 | 0.014 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 69 | GCF_000783935.2_04616 | GCF_000783935.2_04657 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04616 | -2 | 17 | 3.547864 | hypothetical protein | |
| GCF_000783935.2_04617 | -2 | 17 | 3.612323 | Hydroxycarboxylate dehydrogenase B | |
| GCF_000783935.2_04618 | -2 | 17 | 2.632697 | Formate dehydrogenase H | |
| GCF_000783935.2_04619 | -2 | 16 | 3.051253 | Hippurate hydrolase | |
| GCF_000783935.2_04620 | -2 | 16 | 2.530937 | putative MFS-type transporter YcaD | |
| GCF_000783935.2_04621 | -1 | 17 | 2.921929 | Glutamine transport ATP-binding protein GlnQ | |
| GCF_000783935.2_04622 | 0 | 20 | 4.760721 | Arginine transport system permease protein ArtQ | |
| GCF_000783935.2_04623 | 0 | 19 | 5.083874 | Glutamine-binding periplasmic protein | |
| GCF_000783935.2_04624 | -1 | 17 | 4.430064 | hypothetical protein | |
| GCF_000783935.2_04625 | -1 | 17 | 4.710998 | putative siderophore-binding lipoprotein YfiY | |
| GCF_000783935.2_04626 | -1 | 17 | 4.946451 | Iron-uptake system permease protein FeuC | |
| GCF_000783935.2_04627 | -2 | 16 | 4.123172 | putative siderophore transport system permease | |
| GCF_000783935.2_04628 | -3 | 15 | 3.243869 | putative siderophore transport system | |
| GCF_000783935.2_04629 | -2 | 15 | 3.849894 | Metal-pseudopaline receptor CntO | |
| GCF_000783935.2_04630 | 0 | 16 | 4.918802 | Aliphatic sulfonates import ATP-binding protein | |
| GCF_000783935.2_04631 | 1 | 15 | 4.773751 | hypothetical protein | |
| GCF_000783935.2_04632 | 0 | 12 | 4.343176 | hypothetical protein | |
| GCF_000783935.2_04633 | -1 | 13 | 5.594840 | Putative aliphatic sulfonates-binding protein | |
| GCF_000783935.2_04634 | -1 | 13 | 5.539935 | Putative acyl-CoA dehydrogenase YdbM | |
| GCF_000783935.2_04635 | 0 | 15 | 5.635999 | Methanesulfonate monooxygenase | |
| GCF_000783935.2_04636 | 2 | 18 | 6.619703 | HTH-type transcriptional regulator GltC | |
| GCF_000783935.2_04637 | 2 | 17 | 6.655797 | 3-mercaptopropionate dioxygenase | |
| GCF_000783935.2_04638 | 1 | 18 | 6.893022 | Thiosulfate sulfurtransferase GlpE | |
| GCF_000783935.2_04639 | 0 | 19 | 6.057376 | hypothetical protein | |
| GCF_000783935.2_04640 | -1 | 19 | 5.583395 | 3-(3-hydroxy-phenyl)propionate transporter | |
| GCF_000783935.2_04641 | 0 | 19 | 5.236229 | 3-(3-hydroxy-phenyl)propionate transporter | |
| GCF_000783935.2_04642 | 0 | 17 | 4.525339 | 4-hydroxy-2-oxovalerate aldolase | |
| GCF_000783935.2_04643 | 1 | 16 | 3.930336 | Acetaldehyde dehydrogenase | |
| GCF_000783935.2_04644 | 0 | 14 | 3.336290 | 2-keto-4-pentenoate hydratase | |
| GCF_000783935.2_04645 | 0 | 15 | 3.976799 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- | |
| GCF_000783935.2_04646 | -1 | 15 | 4.975474 | 2,3-dihydroxyphenylpropionate/2, | |
| GCF_000783935.2_04647 | -1 | 15 | 5.127094 | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic | |
| GCF_000783935.2_04648 | -1 | 16 | 5.892777 | HTH-type transcriptional regulator XynR | |
| GCF_000783935.2_04649 | -1 | 17 | 6.100126 | hypothetical protein | |
| GCF_000783935.2_04650 | 1 | 16 | 6.220384 | putative ABC transporter permease protein | |
| GCF_000783935.2_04651 | 0 | 15 | 5.049881 | putative ABC transporter ATP-binding protein | |
| GCF_000783935.2_04652 | -1 | 14 | 4.246537 | hypothetical protein | |
| GCF_000783935.2_04653 | -1 | 15 | 3.367418 | Quinate/shikimate dehydrogenase | |
| GCF_000783935.2_04654 | -1 | 15 | 1.428921 | putative glucarate transporter | |
| GCF_000783935.2_04655 | 0 | 19 | 0.142008 | hypothetical protein | |
| GCF_000783935.2_04656 | 2 | 21 | -0.833507 | HTH-type transcriptional repressor NicS | |
| GCF_000783935.2_04657 | 2 | 22 | -0.877174 | Fumarase D |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 39 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 29 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FERRIBNDNGPP | 43 | 8e-07 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 29 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 32 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 51 | 3e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 47 | 8e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 63 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 70 | GCF_000783935.2_04687 | GCF_000783935.2_04715 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04687 | 3 | 22 | -1.698880 | 2-iminobutanoate/2-iminopropanoate deaminase | |
| GCF_000783935.2_04688 | 4 | 24 | -2.401041 | Integration host factor subunit alpha | |
| GCF_000783935.2_04689 | 3 | 21 | -3.135866 | Phenylalanine--tRNA ligase beta subunit | |
| GCF_000783935.2_04690 | 3 | 25 | -4.932797 | Phenylalanine--tRNA ligase alpha subunit | |
| GCF_000783935.2_04691 | 1 | 24 | -5.086505 | 50S ribosomal protein L20 | |
| GCF_000783935.2_04692 | 1 | 19 | -3.049991 | 50S ribosomal protein L35 | |
| GCF_000783935.2_04693 | 1 | 18 | -3.003499 | Translation initiation factor IF-3 | |
| GCF_000783935.2_04694 | 0 | 16 | -2.289055 | Threonine--tRNA ligase | |
| GCF_000783935.2_04695 | 1 | 19 | 0.391674 | hypothetical protein | |
| GCF_000783935.2_04696 | 2 | 19 | 0.363061 | hypothetical protein | |
| GCF_000783935.2_04697 | 2 | 20 | 0.640490 | ATP-dependent 6-phosphofructokinase isozyme 2 | |
| GCF_000783935.2_04698 | -1 | 14 | -0.613271 | hypothetical protein | |
| GCF_000783935.2_04699 | -1 | 13 | -0.725446 | putative ketoamine kinase | |
| GCF_000783935.2_04700 | -1 | 14 | -1.849993 | Protein TonB | |
| GCF_000783935.2_04701 | -2 | 13 | -2.281788 | Protein YciI | |
| GCF_000783935.2_04702 | -1 | 14 | -1.800387 | hypothetical protein | |
| GCF_000783935.2_04703 | -1 | 13 | -1.749614 | Cardiolipin synthase A | |
| GCF_000783935.2_04704 | -1 | 16 | -2.548380 | hypothetical protein | |
| GCF_000783935.2_04705 | 0 | 15 | -3.815357 | hypothetical protein | |
| GCF_000783935.2_04706 | 0 | 15 | -3.671979 | Vitamin B12 import ATP-binding protein BtuD | |
| GCF_000783935.2_04707 | 0 | 21 | -4.101160 | Oligopeptide transport ATP-binding protein OppD | |
| GCF_000783935.2_04708 | 1 | 23 | -4.582910 | Oligopeptide transport system permease protein | |
| GCF_000783935.2_04709 | 1 | 22 | -5.182986 | Oligopeptide transport system permease protein | |
| GCF_000783935.2_04710 | 1 | 27 | -5.504533 | Periplasmic oligopeptide-binding protein | |
| GCF_000783935.2_04711 | 1 | 30 | -4.647474 | hypothetical protein | |
| GCF_000783935.2_04712 | 0 | 28 | -4.373656 | Aldehyde-alcohol dehydrogenase | |
| GCF_000783935.2_04713 | 0 | 25 | -3.725776 | hypothetical protein | |
| GCF_000783935.2_04714 | -1 | 25 | -3.778980 | Thymidine kinase | |
| GCF_000783935.2_04715 | -2 | 21 | -3.500824 | DNA-binding protein H-NS |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DNABINDINGHU | 119 | 6e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TONBPROTEIN | 219 | 3e-74 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 31 | 0.007 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 71 | GCF_000783935.2_04729 | GCF_000783935.2_04737 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04729 | -2 | 14 | 4.040800 | Nitrate/nitrite transporter NarK | |
| GCF_000783935.2_04730 | -1 | 15 | 4.437246 | Nitrate/nitrite sensor protein NarX | |
| GCF_000783935.2_04731 | -1 | 15 | 4.925392 | Nitrate/nitrite response regulator protein NarL | |
| GCF_000783935.2_04732 | -2 | 15 | 5.246006 | Invasin | |
| GCF_000783935.2_04733 | -1 | 16 | 5.566048 | Nitrate reductase | |
| GCF_000783935.2_04734 | -1 | 15 | 4.736742 | Nitric oxide reductase FlRd-NAD(+) reductase | |
| GCF_000783935.2_04735 | 0 | 17 | 3.505574 | Bicarbonate transport ATP-binding protein CmpC | |
| GCF_000783935.2_04736 | -1 | 15 | 3.663282 | Bicarbonate transport system permease protein | |
| GCF_000783935.2_04737 | -2 | 17 | 3.113469 | Nitrate/nitrite binding protein NrtA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 29 | 0.037 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 48 | 5e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 73 | 4e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | INTIMIN | 251 | 1e-76 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 72 | GCF_000783935.2_04780 | GCF_000783935.2_04831 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04780 | 2 | 16 | 0.077612 | hypothetical protein | |
| GCF_000783935.2_04781 | 2 | 18 | 3.955177 | Validamycin A dioxygenase | |
| GCF_000783935.2_04782 | 2 | 18 | 4.189654 | Isoxanthopterin deaminase | |
| GCF_000783935.2_04783 | 2 | 19 | 3.614236 | Riboflavin-binding protein RibY | |
| GCF_000783935.2_04784 | 2 | 20 | 3.552594 | HTH-type transcriptional regulator HdfR | |
| GCF_000783935.2_04785 | 2 | 21 | 4.530179 | Carnitine monooxygenase reductase subunit | |
| GCF_000783935.2_04786 | 1 | 21 | 4.778785 | Pterin deaminase | |
| GCF_000783935.2_04787 | 0 | 19 | 2.543548 | Putative aminoacrylate peracid reductase RutC | |
| GCF_000783935.2_04788 | -1 | 21 | 1.996379 | hypothetical protein | |
| GCF_000783935.2_04789 | -1 | 20 | 2.069351 | hypothetical protein | |
| GCF_000783935.2_04790 | -2 | 18 | 2.513232 | Vitamin B12 import ATP-binding protein BtuD | |
| GCF_000783935.2_04791 | -2 | 15 | 2.972639 | Riboflavin transport system permease protein | |
| GCF_000783935.2_04792 | -1 | 14 | 3.371782 | hypothetical protein | |
| GCF_000783935.2_04793 | -1 | 16 | 4.159424 | hypothetical protein | |
| GCF_000783935.2_04794 | 0 | 15 | 4.009700 | HTH-type transcriptional regulator CdhR | |
| GCF_000783935.2_04795 | 1 | 16 | 4.521245 | Glyceraldehyde-3-phosphate dehydrogenase | |
| GCF_000783935.2_04796 | 2 | 18 | 4.498242 | Glycerol dehydrogenase | |
| GCF_000783935.2_04797 | 1 | 16 | 3.239756 | Putative aliphatic sulfonates transport permease | |
| GCF_000783935.2_04798 | 0 | 15 | 3.041631 | Vitamin B12 import ATP-binding protein BtuD | |
| GCF_000783935.2_04799 | 0 | 14 | 2.413106 | hypothetical protein | |
| GCF_000783935.2_04800 | -1 | 14 | 2.420557 | Hydroxycarboxylate dehydrogenase B | |
| GCF_000783935.2_04801 | -1 | 13 | 0.797245 | Dual-specificity RNA pseudouridine synthase | |
| GCF_000783935.2_04802 | -1 | 14 | -0.272861 | Putative tartrate transporter | |
| GCF_000783935.2_04803 | 1 | 15 | -1.551716 | L-serine dehydratase TdcG | |
| GCF_000783935.2_04804 | 0 | 16 | -3.216304 | Putative reactive intermediate deaminase TdcF | |
| GCF_000783935.2_04805 | 0 | 14 | -2.687118 | PFL-like enzyme TdcE | |
| GCF_000783935.2_04806 | -1 | 16 | -3.600076 | Propionate kinase | |
| GCF_000783935.2_04807 | 0 | 16 | -3.530472 | Threonine/serine transporter TdcC | |
| GCF_000783935.2_04808 | 1 | 17 | -2.606008 | L-threonine dehydratase catabolic TdcB | |
| GCF_000783935.2_04809 | -1 | 15 | -0.538702 | HTH-type transcriptional regulator TsaR | |
| GCF_000783935.2_04810 | 0 | 16 | 1.882528 | Osmoprotectant import ATP-binding protein OsmV | |
| GCF_000783935.2_04811 | 0 | 15 | 2.123283 | Carnitine transport permease protein OpuCD | |
| GCF_000783935.2_04812 | 0 | 14 | 2.282506 | Glycine betaine/carnitine/choline transport | |
| GCF_000783935.2_04813 | -2 | 16 | 3.463075 | Osmoprotectant-binding protein OsmX | |
| GCF_000783935.2_04814 | -2 | 15 | 3.256797 | Nitrilotriacetate monooxygenase component A | |
| GCF_000783935.2_04815 | -2 | 17 | 3.576149 | hypothetical protein | |
| GCF_000783935.2_04816 | -1 | 19 | 3.575409 | hypothetical protein | |
| GCF_000783935.2_04817 | -1 | 18 | 4.539742 | 6,7-dimethyl-8-ribityllumazine synthase 2 | |
| GCF_000783935.2_04818 | -1 | 17 | 4.883584 | Protein mlc | |
| GCF_000783935.2_04819 | 0 | 17 | 4.998500 | putative ABC transporter-binding protein | |
| GCF_000783935.2_04820 | 3 | 19 | 6.340089 | Trehalose transport system permease protein | |
| GCF_000783935.2_04821 | 3 | 19 | 6.075878 | Diacetylchitobiose uptake system permease | |
| GCF_000783935.2_04822 | 3 | 18 | 5.534654 | Ribokinase | |
| GCF_000783935.2_04823 | 3 | 17 | 4.311203 | sn-glycerol-3-phosphate import ATP-binding | |
| GCF_000783935.2_04824 | 3 | 17 | 3.103710 | Inner membrane transport protein YdhC | |
| GCF_000783935.2_04825 | 2 | 16 | 3.490787 | HTH-type transcriptional regulator NimR | |
| GCF_000783935.2_04826 | -1 | 16 | 2.826316 | hypothetical protein | |
| GCF_000783935.2_04827 | -1 | 16 | 3.378232 | hypothetical protein | |
| GCF_000783935.2_04828 | 0 | 16 | 3.555145 | hypothetical protein | |
| GCF_000783935.2_04829 | 1 | 15 | 3.453807 | hypothetical protein | |
| GCF_000783935.2_04830 | -1 | 16 | 4.251780 | hypothetical protein | |
| GCF_000783935.2_04831 | -1 | 16 | 3.538994 | Periplasmic trehalase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 212 | 1e-67 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 29 | 0.030 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BINARYTOXINA | 30 | 0.018 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACETATEKNASE | 520 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | MALTOSEBP | 46 | 1e-07 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 35 | 5e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 62 | 1e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 73 | GCF_000783935.2_04981 | GCF_000783935.2_05012 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04981 | 0 | 25 | -5.449649 | putative protein YedJ | |
| GCF_000783935.2_04982 | 1 | 30 | -6.668998 | Inner membrane protein YedR | |
| GCF_000783935.2_04983 | -1 | 29 | -7.058879 | Outer membrane protein YedS | |
| GCF_000783935.2_04985 | -1 | 30 | -6.413411 | *Protein MtfA | |
| GCF_000783935.2_04987 | -1 | 31 | -6.420484 | *Ribokinase | |
| GCF_000783935.2_04988 | -1 | 30 | -6.926996 | HTH-type transcriptional regulator RpiR | |
| GCF_000783935.2_04989 | -1 | 24 | -5.610124 | Ribose import permease protein RbsC | |
| GCF_000783935.2_04990 | -1 | 22 | -5.209383 | Galactose/methyl galactoside import ATP-binding | |
| GCF_000783935.2_04991 | 0 | 24 | -5.704281 | hypothetical protein | |
| GCF_000783935.2_04992 | 0 | 20 | -5.134741 | D-apiose isomerase | |
| GCF_000783935.2_04993 | 2 | 20 | -4.961440 | hypothetical protein | |
| GCF_000783935.2_04994 | 1 | 19 | -4.748537 | Chitobiase | |
| GCF_000783935.2_04995 | 1 | 21 | -5.669420 | hypothetical protein | |
| GCF_000783935.2_04996 | 0 | 21 | -5.366193 | putative fimbrial chaperone YadV | |
| GCF_000783935.2_04997 | -1 | 18 | -3.922568 | Outer membrane usher protein YehB | |
| GCF_000783935.2_04998 | -2 | 19 | -4.136952 | hypothetical protein | |
| GCF_000783935.2_04999 | -1 | 18 | -4.988657 | putative fimbrial chaperone YraI | |
| GCF_000783935.2_05000 | -2 | 18 | -4.673864 | Transcriptional regulatory protein RcsB | |
| GCF_000783935.2_05001 | -3 | 19 | -4.498185 | Outer membrane protein TolC | |
| GCF_000783935.2_05002 | -1 | 19 | -5.832766 | Colicin V secretion protein CvaA | |
| GCF_000783935.2_05003 | -1 | 19 | -5.938702 | Alpha-hemolysin translocation ATP-binding | |
| GCF_000783935.2_05004 | 1 | 25 | -6.032808 | hypothetical protein | |
| GCF_000783935.2_05005 | 0 | 21 | -3.792998 | hypothetical protein | |
| GCF_000783935.2_05006 | 0 | 21 | -2.814914 | hypothetical protein | |
| GCF_000783935.2_05007 | -1 | 19 | -1.371440 | hypothetical protein | |
| GCF_000783935.2_05008 | -2 | 14 | 0.295226 | putative L,D-transpeptidase ErfK/SrfK | |
| GCF_000783935.2_05009 | -2 | 12 | 0.647118 | HTH-type transcriptional regulator cbl | |
| GCF_000783935.2_05010 | -2 | 11 | 2.173422 | HTH-type transcriptional regulator ArgP | |
| GCF_000783935.2_05012 | -1 | 11 | 3.050218 | *Nitrilotriacetate monooxygenase component A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ECOLIPORIN | 430 | e-153 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 668 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 146 | 1e-41 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 74 | GCF_000783935.2_05079 | GCF_000783935.2_05107 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_05079 | -2 | 20 | -6.675234 | Imidazole glycerol phosphate synthase subunit | |
| GCF_000783935.2_05080 | -1 | 28 | -9.831862 | 1-(5-phosphoribosyl)-5-[(5- | |
| GCF_000783935.2_05081 | 0 | 37 | -12.888840 | Imidazole glycerol phosphate synthase subunit | |
| GCF_000783935.2_05082 | 0 | 43 | -14.519313 | Histidine biosynthesis bifunctional protein | |
| GCF_000783935.2_05083 | 1 | 47 | -16.433270 | hypothetical protein | |
| GCF_000783935.2_05084 | 1 | 45 | -15.615014 | hypothetical protein | |
| GCF_000783935.2_05085 | 2 | 45 | -16.164310 | N, | |
| GCF_000783935.2_05086 | 3 | 41 | -14.450628 | hypothetical protein | |
| GCF_000783935.2_05087 | 2 | 34 | -13.131484 | UDP-galactopyranose mutase | |
| GCF_000783935.2_05088 | 2 | 42 | -15.148222 | hypothetical protein | |
| GCF_000783935.2_05089 | 2 | 37 | -12.482552 | Teichoic acids export ATP-binding protein TagH | |
| GCF_000783935.2_05090 | 3 | 45 | -14.319822 | Teichoic acid translocation permease protein | |
| GCF_000783935.2_05091 | 4 | 50 | -14.838643 | UDP-N-acetylglucosamine 4-epimerase | |
| GCF_000783935.2_05092 | 4 | 61 | -17.058959 | UDP-glucose 6-dehydrogenase | |
| GCF_000783935.2_05093 | 6 | 69 | -19.289669 | hypothetical protein | |
| GCF_000783935.2_05094 | 6 | 69 | -19.446497 | 6-phosphogluconate dehydrogenase, | |
| GCF_000783935.2_05095 | 8 | 80 | -22.722816 | UDP-glucose:undecaprenyl-phosphate | |
| GCF_000783935.2_05096 | 8 | 82 | -23.784528 | Phosphomannomutase/phosphoglucomutase | |
| GCF_000783935.2_05097 | 9 | 83 | -24.845085 | Mannose-1-phosphate guanylyltransferase RfbM | |
| GCF_000783935.2_05098 | 9 | 81 | -26.129084 | hypothetical protein | |
| GCF_000783935.2_05099 | 9 | 82 | -26.002773 | D-inositol-3-phosphate glycosyltransferase | |
| GCF_000783935.2_05100 | 9 | 83 | -25.132318 | hypothetical protein | |
| GCF_000783935.2_05101 | 6 | 74 | -22.744163 | hypothetical protein | |
| GCF_000783935.2_05102 | 5 | 62 | -18.592422 | D-inositol-3-phosphate glycosyltransferase | |
| GCF_000783935.2_05103 | 5 | 59 | -17.066466 | hypothetical protein | |
| GCF_000783935.2_05104 | 5 | 53 | -13.863369 | Glycogen synthase | |
| GCF_000783935.2_05105 | 3 | 41 | -10.229249 | Putative tyrosine-protein kinase in cps region | |
| GCF_000783935.2_05106 | 2 | 17 | -3.028460 | hypothetical protein | |
| GCF_000783935.2_05107 | 2 | 18 | -1.333903 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FbpA_PF05833 | 31 | 0.015 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 29 | 0.031 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 582 | 0.0 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 32 | 0.012 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 75 | GCF_000783935.2_00550 | GCF_000783935.2_00553 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00550 | 0 | 17 | 2.044778 | Formate hydrogenlyase transcriptional activator | |
| GCF_000783935.2_00551 | -1 | 17 | 2.282284 | Molybdenum-pterin-binding protein MopA | |
| GCF_000783935.2_00552 | 0 | 17 | 1.987164 | putative periplasmic iron-binding protein | |
| GCF_000783935.2_00553 | 0 | 19 | 1.636440 | Manganese transport system ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 381 | e-127 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ALARACEMASE | 27 | 0.039 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | adhesinb | 319 | e-111 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF07675 | 30 | 0.016 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| 76 | GCF_000783935.2_00560 | GCF_000783935.2_00569 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00560 | -1 | 17 | -1.083938 | Hemin-binding periplasmic protein HmuT | |
| GCF_000783935.2_00561 | -1 | 17 | -2.598997 | Hemin transport system permease protein HmuU | |
| GCF_000783935.2_00562 | -3 | 11 | -1.850407 | Hemin import ATP-binding protein HmuV | |
| GCF_000783935.2_00563 | -2 | 12 | -1.763807 | D-galactonate dehydratase family member | |
| GCF_000783935.2_00564 | -1 | 10 | -0.775322 | 5-keto-D-gluconate 5-reductase | |
| GCF_000783935.2_00565 | -1 | 10 | -0.761252 | Putative tartrate transporter | |
| GCF_000783935.2_00566 | -2 | 7 | 0.928772 | HTH-type transcriptional repressor NanR | |
| GCF_000783935.2_00567 | -2 | 8 | 1.151485 | DNA mismatch repair protein MutS | |
| GCF_000783935.2_00568 | -2 | 16 | 0.133854 | HTH-type transcriptional regulator DmlR | |
| GCF_000783935.2_00569 | -2 | 16 | -0.377976 | Putative multidrug resistance protein MdtD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FERRIBNDNGPP | 39 | 9e-06 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 28 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 128 | 3e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 70 | 4e-15 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 77 | GCF_000783935.2_00729 | GCF_000783935.2_00745 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00729 | -2 | 15 | 1.792651 | Enterobactin exporter EntS | |
| GCF_000783935.2_00730 | -2 | 14 | 2.238714 | putative protein YjdJ | |
| GCF_000783935.2_00731 | 1 | 13 | 3.960678 | hypothetical protein | |
| GCF_000783935.2_00732 | 0 | 12 | 3.799437 | hypothetical protein | |
| GCF_000783935.2_00733 | 0 | 12 | 4.052302 | Multidrug resistance protein MdtN | |
| GCF_000783935.2_00734 | 1 | 14 | 4.227950 | Multidrug resistance protein MdtO | |
| GCF_000783935.2_00735 | 1 | 12 | 3.663842 | Cation efflux system protein CusC | |
| GCF_000783935.2_00736 | 0 | 11 | 3.336577 | HTH-type transcriptional regulator MalT | |
| GCF_000783935.2_00737 | 0 | 10 | 1.206169 | Diacetyl reductase [(S)-acetoin forming] | |
| GCF_000783935.2_00738 | 0 | 11 | 1.147895 | hypothetical protein | |
| GCF_000783935.2_00739 | 1 | 11 | 0.792184 | Tetracycline resistance protein, class C | |
| GCF_000783935.2_00740 | 1 | 10 | -0.270812 | Di-/tripeptide transporter | |
| GCF_000783935.2_00741 | 0 | 12 | -1.159800 | hypothetical protein | |
| GCF_000783935.2_00742 | 0 | 14 | -1.033870 | hypothetical protein | |
| GCF_000783935.2_00743 | -1 | 12 | 1.000146 | putative protein YycE | |
| GCF_000783935.2_00745 | -2 | 13 | 0.798952 | *Murein hydrolase activator NlpD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 49 | 2e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 26 | 0.026 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 69 | 6e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TYPE3IMSPROT | 30 | 0.033 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 132 | 1e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 59 | 5e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 329 | e-113 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 33 | 0.004 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 78 | GCF_000783935.2_00795 | GCF_000783935.2_00802 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_00795 | 0 | 17 | 4.482277 | 7-alpha-hydroxysteroid dehydrogenase | |
| GCF_000783935.2_00796 | 0 | 18 | 4.111016 | 2-succinyl-6-hydroxy-2, | |
| GCF_000783935.2_00797 | -1 | 19 | 3.850843 | hypothetical protein | |
| GCF_000783935.2_00798 | -2 | 18 | 4.035481 | putative sulfoacetate transporter SauU | |
| GCF_000783935.2_00799 | -2 | 18 | 3.713645 | p-cumate 2,3-dioxygenase system, | |
| GCF_000783935.2_00800 | -2 | 17 | 2.097749 | hypothetical protein | |
| GCF_000783935.2_00801 | -1 | 15 | 1.502775 | Pca regulon regulatory protein | |
| GCF_000783935.2_00802 | -2 | 17 | 1.720283 | Pyridoxal 4-dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 108 | 2e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06057 | 28 | 0.033 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 39 | 2e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 99 | 3e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 79 | GCF_000783935.2_01195 | GCF_000783935.2_01199 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01195 | 5 | 49 | -5.735793 | hypothetical protein | |
| GCF_000783935.2_01196 | 7 | 56 | -6.055265 | Bacterioferritin | |
| GCF_000783935.2_01197 | 7 | 58 | -5.101548 | Bacterioferritin-associated ferredoxin | |
| GCF_000783935.2_01198 | 7 | 55 | -4.131835 | Elongation factor Tu 1 | |
| GCF_000783935.2_01199 | 5 | 46 | -3.573643 | Elongation factor G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PREPILNPTASE | 117 | 6e-35 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HELNAPAPROT | 37 | 7e-06 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETOQM | 80 | 4e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETOQM | 611 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 80 | GCF_000783935.2_01280 | GCF_000783935.2_01287 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01280 | 0 | 12 | 1.051523 | L-amino acid N-acetyltransferase AaaT | |
| GCF_000783935.2_01281 | -1 | 13 | 0.920857 | Glutathione hydrolase proenzyme | |
| GCF_000783935.2_01282 | -2 | 14 | 0.427930 | putative protein YhhA | |
| GCF_000783935.2_01283 | -2 | 14 | 0.577038 | Glycerophosphodiester phosphodiesterase, | |
| GCF_000783935.2_01284 | -2 | 15 | 0.246452 | sn-glycerol-3-phosphate import ATP-binding | |
| GCF_000783935.2_01285 | -2 | 18 | 0.240445 | Lactose transport system permease protein LacG | |
| GCF_000783935.2_01286 | -2 | 18 | 0.438924 | sn-glycerol-3-phosphate transport system | |
| GCF_000783935.2_01287 | -3 | 15 | 0.089687 | sn-glycerol-3-phosphate-binding periplasmic |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 33 | 4e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NAFLGMOTY | 34 | 0.001 | Sodium-type flagellar protein MotY precursor signature. | |
>NAFLGMOTY#Sodium-type flagellar protein MotY precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 26 | 0.031 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF04619 | 29 | 0.012 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 29 | 0.040 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | MALTOSEBP | 39 | 3e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 81 | GCF_000783935.2_01543 | GCF_000783935.2_01550 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01543 | -1 | 15 | 2.798622 | Multidrug resistance protein 3 | |
| GCF_000783935.2_01544 | -2 | 15 | 3.186373 | hypothetical protein | |
| GCF_000783935.2_01545 | -2 | 17 | 3.261415 | Acetyltransferase | |
| GCF_000783935.2_01546 | -2 | 19 | 3.425159 | HTH-type transcriptional regulator BetI | |
| GCF_000783935.2_01547 | -3 | 18 | 3.563168 | Multidrug resistance protein MexA | |
| GCF_000783935.2_01548 | -2 | 18 | 3.656534 | Multidrug resistance protein MexB | |
| GCF_000783935.2_01549 | -2 | 16 | 3.419539 | Outer membrane protein OprM | |
| GCF_000783935.2_01550 | -2 | 14 | 3.087387 | Bicyclomycin resistance protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 142 | 1e-39 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 74 | 1e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 38 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 54 | 3e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 44 | 4e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 1152 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 68 | 9e-15 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 82 | GCF_000783935.2_01580 | GCF_000783935.2_01586 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01580 | 0 | 10 | 0.173344 | putative L-galactonate transporter | |
| GCF_000783935.2_01581 | 0 | 11 | 2.419904 | putative 2-dehydro-3-deoxygalactonokinase DgoK1 | |
| GCF_000783935.2_01582 | 1 | 13 | 2.917965 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | |
| GCF_000783935.2_01583 | 0 | 13 | 1.640636 | Hexose-6-phosphate:phosphate antiporter | |
| GCF_000783935.2_01584 | 0 | 10 | 1.054436 | Membrane sensor protein UhpC | |
| GCF_000783935.2_01585 | 0 | 9 | 0.180967 | Signal transduction histidine-protein | |
| GCF_000783935.2_01586 | -1 | 11 | -2.007134 | Transcriptional regulatory protein UhpA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 49 | 1e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 35 | 7e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 40 | 1e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 69 | 4e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 83 | GCF_000783935.2_01618 | GCF_000783935.2_01624 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01618 | -1 | 10 | -0.044233 | Membrane protein insertase YidC | |
| GCF_000783935.2_01619 | 0 | 14 | 1.225178 | tRNA modification GTPase MnmE | |
| GCF_000783935.2_01620 | -1 | 17 | 0.027440 | hypothetical protein | |
| GCF_000783935.2_01621 | -1 | 11 | -0.100499 | hypothetical protein | |
| GCF_000783935.2_01622 | -1 | 12 | -1.096413 | Multidrug resistance protein MdtL | |
| GCF_000783935.2_01623 | 0 | 11 | -1.671741 | HTH-type transcriptional regulator YidZ | |
| GCF_000783935.2_01624 | 0 | 12 | -2.404226 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | 60KDINNERMP | 818 | 0.0 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 39 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 59 | 1e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05946 | 29 | 0.013 | Toxin-coregulated pilus subunit TcpA | |
>PF05946#Toxin-coregulated pilus subunit TcpA | |||||
| 84 | GCF_000783935.2_01918 | GCF_000783935.2_01925 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01918 | -1 | 18 | -1.017739 | Glucose-6-phosphate isomerase | |
| GCF_000783935.2_01919 | -1 | 19 | -1.085175 | UDP-3-O-(3-hydroxymyristoyl)glucosamine | |
| GCF_000783935.2_01920 | 0 | 18 | -1.006176 | hypothetical protein | |
| GCF_000783935.2_01921 | 1 | 24 | -1.500459 | Protein PsiE | |
| GCF_000783935.2_01922 | 1 | 24 | -1.033297 | Maltose/maltodextrin transport system permease | |
| GCF_000783935.2_01923 | 1 | 23 | -1.371440 | Maltose/maltodextrin transport system permease | |
| GCF_000783935.2_01924 | 1 | 19 | -1.101671 | Maltose/maltodextrin-binding periplasmic | |
| GCF_000783935.2_01925 | 0 | 15 | 0.331519 | Maltose/maltodextrin import ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPD | 31 | 0.018 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 28 | 0.015 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | MALTOSEBP | 747 | 0.0 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 34 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 85 | GCF_000783935.2_01978 | GCF_000783935.2_01982 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01978 | 0 | 15 | 3.880850 | Transcriptional regulatory protein OmpR | |
| GCF_000783935.2_01979 | -1 | 14 | 2.987467 | Ribose import binding protein RbsB | |
| GCF_000783935.2_01980 | 0 | 13 | 2.711947 | Ribose import permease protein RbsC | |
| GCF_000783935.2_01981 | -1 | 11 | 1.038247 | Ribose import ATP-binding protein RbsA | |
| GCF_000783935.2_01982 | -2 | 9 | -0.674561 | Sensor histidine kinase RcsC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 92 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SUBTILISIN | 29 | 0.018 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 28 | 0.047 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 53 | 3e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 86 | GCF_000783935.2_01990 | GCF_000783935.2_01995 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_01990 | 0 | 17 | 3.052585 | hypothetical protein | |
| GCF_000783935.2_01991 | 0 | 17 | 3.704195 | Phosphoribosyl 1,2-cyclic phosphate | |
| GCF_000783935.2_01992 | 0 | 17 | 3.397987 | Aminoalkylphosphonate N-acetyltransferase | |
| GCF_000783935.2_01993 | 0 | 17 | 3.970060 | Ribose 1,5-bisphosphate phosphokinase PhnN | |
| GCF_000783935.2_01994 | 1 | 19 | 4.203816 | Alpha-D-ribose 1-methylphosphonate | |
| GCF_000783935.2_01995 | 0 | 21 | 4.593951 | Alpha-D-ribose 1-methylphosphonate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 26 | 0.034 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 33 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | UREASE | 31 | 0.008 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 28 | 0.029 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 87 | GCF_000783935.2_02017 | GCF_000783935.2_02029 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02017 | 1 | 27 | -6.255314 | Outer membrane usher protein PapC | |
| GCF_000783935.2_02018 | 0 | 35 | -8.306563 | putative fimbrial-like protein YcbV | |
| GCF_000783935.2_02019 | -1 | 30 | -6.605532 | Major fimbrial subunit | |
| GCF_000783935.2_02020 | -1 | 27 | -5.903301 | hypothetical protein | |
| GCF_000783935.2_02021 | 0 | 23 | -4.546044 | hypothetical protein | |
| GCF_000783935.2_02022 | -2 | 12 | -1.519836 | hypothetical protein | |
| GCF_000783935.2_02023 | -1 | 11 | -1.138912 | hypothetical protein | |
| GCF_000783935.2_02024 | -1 | 13 | 0.961785 | hypothetical protein | |
| GCF_000783935.2_02025 | -1 | 12 | 1.423172 | 3-phenylpropionate-dihydrodiol/cinnamic | |
| GCF_000783935.2_02026 | -1 | 14 | 1.899295 | hypothetical protein | |
| GCF_000783935.2_02028 | -1 | 14 | 1.217471 | *hypothetical protein | |
| GCF_000783935.2_02029 | 0 | 14 | 0.799050 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 667 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 28 | 0.036 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 80 | 1e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 49 | 1e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 82 | 1e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 43 | 1e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 88 | GCF_000783935.2_02213 | GCF_000783935.2_02227 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02213 | -1 | 14 | 0.883275 | Cation efflux system protein CusA | |
| GCF_000783935.2_02214 | 0 | 12 | 0.003076 | Cation efflux system protein CusB | |
| GCF_000783935.2_02215 | 0 | 11 | -0.614704 | Cation efflux system protein CusF | |
| GCF_000783935.2_02216 | -1 | 11 | -0.413679 | Cation efflux system protein CusC | |
| GCF_000783935.2_02217 | -1 | 12 | 0.737924 | Transcriptional regulatory protein CusR | |
| GCF_000783935.2_02218 | -2 | 12 | 1.728939 | Sensor histidine kinase CusS | |
| GCF_000783935.2_02219 | -1 | 11 | 1.210448 | 50S ribosomal protein L16 3-hydroxylase | |
| GCF_000783935.2_02224 | 0 | 12 | 1.174946 | *hypothetical protein | |
| GCF_000783935.2_02225 | 0 | 13 | 1.175308 | Inner membrane transport permease YhhJ | |
| GCF_000783935.2_02226 | -1 | 11 | 1.155549 | Ribosome-associated ATPase | |
| GCF_000783935.2_02227 | 0 | 14 | 0.589742 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 688 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 38 | 9e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 84 | 6e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SECYTRNLCASE | 30 | 0.026 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPF | 26 | 0.047 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ABC2TRNSPORT | 47 | 3e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 32 | 0.013 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 68 | 1e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 89 | GCF_000783935.2_02378 | GCF_000783935.2_02388 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02378 | 2 | 18 | 0.006723 | Carbamoyl-phosphate synthase large chain | |
| GCF_000783935.2_02379 | 1 | 16 | -1.143130 | putative lipoprotein YgdR | |
| GCF_000783935.2_02380 | 1 | 16 | -0.433878 | Toxin-antitoxin biofilm protein TabA | |
| GCF_000783935.2_02381 | 1 | 15 | -0.327311 | Thermoresistant gluconokinase | |
| GCF_000783935.2_02382 | 0 | 15 | 0.970200 | 5-keto-D-gluconate 5-reductase | |
| GCF_000783935.2_02383 | 0 | 16 | 1.524512 | HTH-type transcriptional regulator GntR | |
| GCF_000783935.2_02384 | -1 | 14 | 1.811111 | 2-ketogluconate reductase | |
| GCF_000783935.2_02385 | -1 | 13 | 1.876991 | Putative tartrate transporter | |
| GCF_000783935.2_02386 | 0 | 13 | 1.857199 | Glutathione-regulated potassium-efflux system | |
| GCF_000783935.2_02387 | 0 | 12 | 2.125929 | Glutathione-regulated potassium-efflux system | |
| GCF_000783935.2_02388 | 1 | 13 | -0.016427 | IS1595 family transposase ISSsu9 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 32 | 0.017 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 147 | 1e-45 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 31 | 0.005 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 45 | 3e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PRPHPHLPASEC | 28 | 0.023 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| 90 | GCF_000783935.2_02495 | GCF_000783935.2_02507 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02495 | 3 | 21 | 7.107001 | Type 4 prepilin-like proteins leader | |
| GCF_000783935.2_02496 | 3 | 22 | 7.576647 | Type II secretion system protein N | |
| GCF_000783935.2_02497 | 3 | 19 | 7.005858 | Type II secretion system protein M | |
| GCF_000783935.2_02498 | 2 | 18 | 6.201359 | Type II secretion system protein L | |
| GCF_000783935.2_02499 | 5 | 21 | 5.627749 | Putative type II secretion system protein K | |
| GCF_000783935.2_02500 | 5 | 20 | 5.732740 | Type II secretion system protein J | |
| GCF_000783935.2_02501 | 0 | 19 | 3.956337 | hypothetical protein | |
| GCF_000783935.2_02502 | -1 | 16 | 2.534128 | Putative type II secretion system protein H | |
| GCF_000783935.2_02503 | -1 | 11 | 1.638569 | Type II secretion system protein G | |
| GCF_000783935.2_02504 | -1 | 10 | 1.523558 | Type II secretion system protein F | |
| GCF_000783935.2_02505 | -1 | 9 | 0.578289 | Type II secretion system protein E | |
| GCF_000783935.2_02506 | -1 | 9 | -1.135918 | Secretin PulD | |
| GCF_000783935.2_02507 | -1 | 12 | -1.698419 | Type II secretion system protein C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PREPILNPTASE | 280 | 4e-97 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPH | 28 | 0.030 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPG | 29 | 0.006 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPG | 31 | 7e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPH | 182 | 8e-62 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPG | 238 | 1e-84 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPF | 524 | 0.0 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPD | 836 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPC | 216 | 6e-72 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| 91 | GCF_000783935.2_02659 | GCF_000783935.2_02664 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02659 | 0 | 19 | 2.467658 | Sulfate/thiosulfate import ATP-binding protein | |
| GCF_000783935.2_02660 | 0 | 18 | 2.492718 | hypothetical protein | |
| GCF_000783935.2_02661 | 3 | 16 | 2.749130 | hypothetical protein | |
| GCF_000783935.2_02662 | 3 | 16 | 3.623311 | Membrane sensor protein UhpC | |
| GCF_000783935.2_02663 | 1 | 18 | 3.452728 | Signal transduction histidine-protein | |
| GCF_000783935.2_02664 | -1 | 16 | 3.038282 | Transcriptional regulatory protein UhpA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 29 | 0.026 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 35 | 4e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 44 | 5e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 75 | 4e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 92 | GCF_000783935.2_02674 | GCF_000783935.2_02683 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02674 | 1 | 14 | -0.800690 | Peroxyureidoacrylate/ureidoacrylate | |
| GCF_000783935.2_02675 | 1 | 12 | -0.428836 | Peptide antibiotic transporter SbmA | |
| GCF_000783935.2_02676 | 1 | 13 | -0.436662 | hypothetical protein | |
| GCF_000783935.2_02677 | 1 | 12 | -1.275537 | Inner membrane protein YaiY | |
| GCF_000783935.2_02678 | 0 | 11 | -1.437435 | hypothetical protein | |
| GCF_000783935.2_02679 | 0 | 10 | -1.514119 | D-alanine--D-alanine ligase A | |
| GCF_000783935.2_02680 | 2 | 12 | -1.421341 | Staphyloferrin B transporter | |
| GCF_000783935.2_02681 | 2 | 15 | -2.280590 | 5-keto-D-gluconate 5-reductase | |
| GCF_000783935.2_02682 | 0 | 11 | -1.171878 | Quinolone resistance transporter | |
| GCF_000783935.2_02683 | 1 | 11 | -0.221222 | HTH-type transcriptional regulator GntR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ISCHRISMTASE | 37 | 2e-05 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SSPANPROTEIN | 31 | 0.008 | Salmonella invasion protein InvJ signature. | |
>SSPANPROTEIN#Salmonella invasion protein InvJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 124 | 3e-34 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 164 | 3e-52 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 30 | 0.023 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TACYTOLYSIN | 31 | 0.008 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| 93 | GCF_000783935.2_02718 | GCF_000783935.2_02723 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02718 | -1 | 16 | -0.134451 | Protein translocase subunit SecD | |
| GCF_000783935.2_02719 | -2 | 15 | 0.248076 | Protein translocase subunit SecF | |
| GCF_000783935.2_02720 | -2 | 15 | 0.074841 | hypothetical protein | |
| GCF_000783935.2_02721 | -1 | 14 | 0.433910 | hypothetical protein | |
| GCF_000783935.2_02722 | -1 | 13 | -0.123540 | hypothetical protein | |
| GCF_000783935.2_02723 | 1 | 18 | -0.987416 | Nucleoside-specific channel-forming protein Tsx |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SECFTRNLCASE | 69 | 8e-15 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SECFTRNLCASE | 346 | e-121 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ARGREPRESSOR | 32 | 0.001 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CHANNELTSX | 533 | 0.0 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| 94 | GCF_000783935.2_02802 | GCF_000783935.2_02811 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02802 | 3 | 14 | -1.305105 | Multidrug efflux pump subunit AcrB | |
| GCF_000783935.2_02803 | 5 | 11 | -1.382063 | Multidrug efflux pump subunit AcrA | |
| GCF_000783935.2_02804 | 4 | 10 | -1.087450 | HTH-type transcriptional regulator AcrR | |
| GCF_000783935.2_02805 | 3 | 11 | 0.967741 | Mechanosensitive channel MscK | |
| GCF_000783935.2_02806 | 4 | 15 | 2.217775 | hypothetical protein | |
| GCF_000783935.2_02807 | 3 | 14 | 2.664746 | Primosomal replication protein N'' | |
| GCF_000783935.2_02808 | 2 | 16 | 1.220759 | Inner membrane protein YbaN | |
| GCF_000783935.2_02809 | 2 | 17 | 1.064565 | Adenine phosphoribosyltransferase | |
| GCF_000783935.2_02810 | 1 | 15 | 1.469469 | DNA polymerase III subunit tau | |
| GCF_000783935.2_02811 | -1 | 15 | -0.021112 | Nucleoid-associated protein YbaB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 1376 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 195 | 2e-65 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CHANLCOLICIN | 37 | 5e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | IGASERPTASE | 44 | 3e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TYPE4SSCAGX | 26 | 0.046 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| 95 | GCF_000783935.2_02844 | GCF_000783935.2_02853 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02844 | -1 | 14 | -0.895138 | Cysteine--tRNA ligase | |
| GCF_000783935.2_02845 | -1 | 15 | -0.706012 | putative protein YbcJ | |
| GCF_000783935.2_02846 | -1 | 15 | -0.506763 | Bifunctional protein FolD protein | |
| GCF_000783935.2_02848 | -1 | 17 | -1.137522 | *hypothetical protein | |
| GCF_000783935.2_02849 | -2 | 18 | -0.708091 | Multidrug resistance protein MdtA | |
| GCF_000783935.2_02850 | -1 | 16 | -0.951202 | Transcriptional activator protein CopR | |
| GCF_000783935.2_02851 | -2 | 17 | -0.913025 | Adaptive-response sensory-kinase SasA | |
| GCF_000783935.2_02852 | -1 | 19 | -1.493541 | Ornithine lipid N-methyltransferase | |
| GCF_000783935.2_02853 | 0 | 20 | -2.265695 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 32 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 51 | 2e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 71 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 42 | 4e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SECFTRNLCASE | 28 | 0.033 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| 96 | GCF_000783935.2_02993 | GCF_000783935.2_03003 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_02993 | -1 | 15 | 4.477311 | Enterobactin exporter EntS | |
| GCF_000783935.2_02994 | -1 | 16 | 4.293954 | Ferrienterobactin-binding periplasmic protein | |
| GCF_000783935.2_02995 | -2 | 16 | 4.910923 | Isochorismate synthase EntC | |
| GCF_000783935.2_02996 | -1 | 15 | 4.080496 | Enterobactin synthase component E | |
| GCF_000783935.2_02997 | 0 | 15 | 3.611766 | Enterobactin synthase component B | |
| GCF_000783935.2_02998 | 1 | 15 | 4.587200 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
| GCF_000783935.2_02999 | 1 | 15 | 4.658250 | Proofreading thioesterase EntH | |
| GCF_000783935.2_03000 | -1 | 15 | 4.194892 | hypothetical protein | |
| GCF_000783935.2_03001 | 0 | 18 | 3.677697 | Peptide transporter CstA | |
| GCF_000783935.2_03002 | 0 | 18 | 3.426134 | hypothetical protein | |
| GCF_000783935.2_03003 | 0 | 19 | 3.560149 | Cyclic-di-GMP-binding biofilm dispersal mediator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | FERRIBNDNGPP | 60 | 1e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ISCHRISMTASE | 417 | e-150 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 330 | e-117 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 31 | 0.015 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 135 | 6e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 97 | GCF_000783935.2_03205 | GCF_000783935.2_03212 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03205 | 0 | 12 | 1.874024 | putative multidrug ABC transporter permease | |
| GCF_000783935.2_03206 | -1 | 11 | 1.906708 | putative multidrug ABC transporter permease | |
| GCF_000783935.2_03207 | -1 | 9 | 2.021169 | putative multidrug ABC transporter ATP-binding | |
| GCF_000783935.2_03208 | 0 | 10 | 1.584632 | hypothetical protein | |
| GCF_000783935.2_03209 | 0 | 11 | 1.052378 | HTH-type transcriptional dual regulator CecR | |
| GCF_000783935.2_03210 | 0 | 12 | 1.506844 | ATP-dependent RNA helicase RhlE | |
| GCF_000783935.2_03211 | -1 | 11 | 0.661141 | ATP-dependent DNA helicase DinG | |
| GCF_000783935.2_03212 | 1 | 14 | 0.587272 | putative protein YbiB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ABC2TRNSPORT | 43 | 6e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 31 | 0.018 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 69 | 4e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 65 | 6e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SECA | 30 | 0.027 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | 56KDTSANTIGN | 29 | 0.032 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| 98 | GCF_000783935.2_03269 | GCF_000783935.2_03278 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03269 | -1 | 14 | 1.062695 | D-alanyl-D-alanine carboxypeptidase DacC | |
| GCF_000783935.2_03270 | 1 | 13 | 1.362707 | Deoxyribose operon repressor | |
| GCF_000783935.2_03271 | 0 | 13 | 2.449807 | Putative undecaprenyl-diphosphatase YbjG | |
| GCF_000783935.2_03272 | -1 | 12 | 0.756088 | Multidrug transporter MdfA | |
| GCF_000783935.2_03273 | -1 | 12 | 0.264551 | 5-amino-6-(5-phospho-D-ribitylamino)uracil | |
| GCF_000783935.2_03274 | -1 | 11 | 0.840976 | Inner membrane protein YbjJ | |
| GCF_000783935.2_03275 | -1 | 12 | -0.638107 | HTH-type transcriptional regulator RcdA | |
| GCF_000783935.2_03276 | -1 | 14 | -1.017583 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
| GCF_000783935.2_03277 | -1 | 13 | -1.483593 | hypothetical protein | |
| GCF_000783935.2_03278 | -2 | 12 | 0.982609 | Aspartate/alanine antiporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BLACTAMASEA | 31 | 0.005 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 44 | 4e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 77 | 7e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 34 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 99 | GCF_000783935.2_03402 | GCF_000783935.2_03408 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03402 | -1 | 21 | -2.499809 | *hypothetical protein | |
| GCF_000783935.2_03403 | -1 | 22 | -2.663107 | Multidrug resistance protein MdtA | |
| GCF_000783935.2_03404 | 0 | 24 | -4.257093 | Nickel and cobalt resistance protein CnrA | |
| GCF_000783935.2_03405 | 0 | 29 | -6.902665 | hypothetical protein | |
| GCF_000783935.2_03406 | 0 | 18 | -2.990757 | hypothetical protein | |
| GCF_000783935.2_03407 | -1 | 14 | 0.164992 | hypothetical protein | |
| GCF_000783935.2_03408 | 1 | 15 | -0.492334 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 67 | 4e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 40 | 9e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 451 | e-144 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 38 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 100 | GCF_000783935.2_03613 | GCF_000783935.2_03620 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03613 | 1 | 18 | 0.061459 | hypothetical protein | |
| GCF_000783935.2_03614 | 2 | 17 | -2.141298 | hypothetical protein | |
| GCF_000783935.2_03615 | -1 | 13 | -0.954145 | hypothetical protein | |
| GCF_000783935.2_03616 | -1 | 14 | 0.586030 | hypothetical protein | |
| GCF_000783935.2_03617 | -1 | 14 | 0.884233 | Phosphoserine phosphatase 1 | |
| GCF_000783935.2_03618 | -2 | 14 | 0.379744 | hypothetical protein | |
| GCF_000783935.2_03619 | -2 | 12 | -0.382653 | 3'3'-cGAMP-specific phosphodiesterase 1 | |
| GCF_000783935.2_03620 | -1 | 13 | 0.889956 | Fe(3+) dicitrate transport protein FecA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 67 | 2e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | LCRVANTIGEN | 30 | 0.023 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | YERSSTKINASE | 29 | 0.049 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ECOLNEIPORIN | 31 | 0.020 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| 101 | GCF_000783935.2_03769 | GCF_000783935.2_03775 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03769 | 0 | 13 | 3.680260 | Aurachin B dehydrogenase | |
| GCF_000783935.2_03770 | 1 | 12 | 2.669374 | hypothetical protein | |
| GCF_000783935.2_03771 | 2 | 12 | 2.296017 | HTH-type transcriptional activator RhaR | |
| GCF_000783935.2_03772 | 1 | 16 | 1.359433 | Hippurate hydrolase | |
| GCF_000783935.2_03773 | 4 | 17 | 1.185328 | Quinolone resistance protein NorB | |
| GCF_000783935.2_03774 | 5 | 17 | 1.120771 | Psp operon transcriptional activator | |
| GCF_000783935.2_03775 | 4 | 19 | 2.055192 | Phage shock protein A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | NUCEPIMERASE | 41 | 2e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 90 | 2e-21 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 348 | e-120 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 29 | 0.018 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 102 | GCF_000783935.2_03809 | GCF_000783935.2_03814 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03809 | 1 | 28 | -2.693266 | Diacetyl reductase [(S)-acetoin forming] | |
| GCF_000783935.2_03810 | 1 | 28 | -3.228921 | hypothetical protein | |
| GCF_000783935.2_03811 | 1 | 31 | -3.708385 | hypothetical protein | |
| GCF_000783935.2_03812 | 1 | 28 | -2.959703 | N-ethylmaleimide reductase | |
| GCF_000783935.2_03813 | 0 | 23 | -1.755166 | hypothetical protein | |
| GCF_000783935.2_03814 | 1 | 25 | -1.702277 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 120 | 5e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHTETR | 63 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 83 | 4e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | DHBDHDRGNASE | 89 | 7e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 103 | GCF_000783935.2_03883 | GCF_000783935.2_03887 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_03883 | -1 | 24 | 5.275915 | hypothetical protein | |
| GCF_000783935.2_03884 | -1 | 13 | 2.617963 | RTX-I toxin-activating lysine-acyltransferase | |
| GCF_000783935.2_03885 | -1 | 12 | 1.641493 | Hemolysin transporter protein ShlB | |
| GCF_000783935.2_03886 | -1 | 11 | 0.205582 | putative oxidoreductase YdgJ | |
| GCF_000783935.2_03887 | 0 | 12 | -0.100585 | Glycerol-3-phosphate regulon repressor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05860 | 86 | 1e-21 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXINC | 127 | 8e-40 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF00577 | 34 | 0.001 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ARGREPRESSOR | 30 | 0.005 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| 104 | GCF_000783935.2_04191 | GCF_000783935.2_04199 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04191 | 0 | 11 | 0.600645 | hypothetical protein | |
| GCF_000783935.2_04192 | 0 | 13 | 0.597276 | Uric acid permease PucK | |
| GCF_000783935.2_04193 | 1 | 13 | 0.386322 | C4-dicarboxylate transport transcriptional | |
| GCF_000783935.2_04194 | 0 | 13 | 1.248252 | Phosphoglycerate transport system sensor protein | |
| GCF_000783935.2_04195 | -1 | 13 | 1.717478 | Phosphoglycerate transport regulatory protein | |
| GCF_000783935.2_04196 | 0 | 15 | 2.288267 | Phosphoglycerate transporter protein | |
| GCF_000783935.2_04197 | 0 | 15 | 2.969138 | Oxalate:formate antiporter | |
| GCF_000783935.2_04198 | 2 | 14 | 2.827813 | hypothetical protein | |
| GCF_000783935.2_04199 | 1 | 12 | 3.112569 | Purine ribonucleoside efflux pump NepI |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF05272 | 30 | 0.014 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 266 | 9e-87 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 32 | 0.005 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 47 | 8e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 37 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 38 | 8e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 105 | GCF_000783935.2_04221 | GCF_000783935.2_04228 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04221 | 0 | 14 | 2.695855 | Glutaminase 2 | |
| GCF_000783935.2_04222 | -1 | 14 | 3.050264 | Succinate semialdehyde dehydrogenase [NAD(P)+] | |
| GCF_000783935.2_04223 | 0 | 13 | 2.688011 | HTH-type transcriptional regulator GltR | |
| GCF_000783935.2_04224 | 2 | 11 | 1.790480 | Mycothiol acetyltransferase | |
| GCF_000783935.2_04225 | 1 | 10 | 0.863196 | L-lactate dehydrogenase 1 | |
| GCF_000783935.2_04226 | 1 | 12 | 0.135548 | hypothetical protein | |
| GCF_000783935.2_04227 | 2 | 12 | -1.082136 | putative isomerase YddE | |
| GCF_000783935.2_04228 | -1 | 11 | -1.723688 | Sugar efflux transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BLACTAMASEA | 33 | 0.001 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | SACTRNSFRASE | 38 | 4e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ARGDEIMINASE | 30 | 0.010 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 60 | 8e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 106 | GCF_000783935.2_04531 | GCF_000783935.2_04537 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04531 | -2 | 12 | -2.268390 | hypothetical protein | |
| GCF_000783935.2_04532 | -2 | 13 | -2.360342 | Anaerobic nitric oxide reductase transcription | |
| GCF_000783935.2_04533 | -1 | 10 | -0.173097 | Putative carbamoyltransferase YgeW | |
| GCF_000783935.2_04534 | 0 | 11 | 0.351973 | Diaminopropionate ammonia-lyase | |
| GCF_000783935.2_04535 | 1 | 14 | -0.143693 | N-formyl-4-amino-5-aminomethyl-2- | |
| GCF_000783935.2_04536 | -1 | 15 | -0.487467 | D-phenylhydantoinase | |
| GCF_000783935.2_04537 | -1 | 13 | -0.755711 | Carbamate kinase 1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETA | 35 | 6e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 392 | e-133 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | UREASE | 43 | 2e-06 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | CARBMTKINASE | 425 | e-153 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 107 | GCF_000783935.2_04729 | GCF_000783935.2_04732 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_04729 | -2 | 14 | 4.040800 | Nitrate/nitrite transporter NarK | |
| GCF_000783935.2_04730 | -1 | 15 | 4.437246 | Nitrate/nitrite sensor protein NarX | |
| GCF_000783935.2_04731 | -1 | 15 | 4.925392 | Nitrate/nitrite response regulator protein NarL | |
| GCF_000783935.2_04732 | -2 | 15 | 5.246006 | Invasin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 29 | 0.037 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | PF06580 | 48 | 5e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | HTHFIS | 73 | 4e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | INTIMIN | 251 | 1e-76 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 108 | GCF_000783935.2_05129 | GCF_000783935.2_05135 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| GCF_000783935.2_05129 | -2 | 16 | 2.093507 | N(G),N(G)-dimethylarginine | |
| GCF_000783935.2_05130 | putative cyclic di-GMP phosphodiesterase PdeB | ||||
| GCF_000783935.2_05131 | Multidrug resistance protein MdtA | ||||
| GCF_000783935.2_05132 | Multidrug resistance protein MdtB | ||||
| GCF_000783935.2_05133 | Multidrug resistance protein MdtC | ||||
| GCF_000783935.2_05134 | Putative multidrug resistance protein MdtD | ||||
| GCF_000783935.2_05135 | Signal transduction histidine-protein kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ARGDEIMINASE | 32 | 0.002 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | RTXTOXIND | 50 | 9e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 894 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | ACRIFLAVINRP | 886 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | TCRTETB | 120 | 7e-32 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| GCF_000783935 | BCTERIALGSPF | 33 | 0.003 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||