| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | blahblah100150 | blahblah100620 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah100150 | 2 | 12 | 2.243575 | DNA polymerase III subunit beta | |
| blahblah100155 | 1 | 11 | 2.880914 | RNA-binding protein | |
| blahblah100160 | 0 | 12 | 2.622994 | DNA recombination protein RecF | |
| blahblah100165 | 0 | 13 | 3.000534 | DNA gyrase subunit B | |
| blahblah100170 | 0 | 13 | 2.767240 | DNA gyrase subunit A | |
| blahblah100175 | -1 | 11 | 2.411136 | carbohydrate kinase | |
| blahblah100180 | -1 | 11 | 1.901082 | histidine ammonia-lyase | |
| blahblah100185 | -1 | 13 | 1.426078 | serine--tRNA ligase | |
| blahblah100190 | -1 | 13 | 1.265987 | azaleucine resistance protein AzlC | |
| blahblah100195 | 1 | 14 | 1.808626 | membrane protein | |
| blahblah100200 | 2 | 14 | 2.109570 | homoserine O-acetyltransferase | |
| blahblah100205 | 4 | 16 | 2.214835 | membrane protein | |
| blahblah100210 | 5 | 16 | 2.316962 | DHH family phosphoesterase | |
| blahblah100215 | 7 | 17 | 2.370776 | 50S ribosomal protein L9 | |
| blahblah100220 | 7 | 18 | 2.293077 | replicative DNA helicase | |
| blahblah100225 | 8 | 19 | 1.800345 | adenylosuccinate synthetase | |
| blahblah100240 | 4 | 18 | 2.502395 | **DNA-binding response regulator | |
| blahblah100245 | 2 | 18 | 2.673770 | PAS domain-containing sensor histidine kinase | |
| blahblah100250 | -1 | 14 | 1.617040 | hypothetical protein | |
| blahblah100255 | -3 | 13 | 1.185623 | hypothetical protein | |
| blahblah100260 | -3 | 14 | 1.420367 | metallo-hydrolase | |
| blahblah100265 | -2 | 15 | 1.178339 | multifunctional 2',3'-cyclic-nucleotide | |
| blahblah100270 | 4 | 18 | -1.604859 | 23S rRNA | |
| blahblah100275 | 4 | 17 | -1.894549 | hypothetical protein | |
| blahblah100280 | 2 | 18 | 0.219282 | hypothetical protein | |
| blahblah100285 | 2 | 20 | 2.366148 | transposase | |
| blahblah100290 | 2 | 20 | 2.366148 | hypothetical protein | |
| blahblah100295 | 1 | 19 | 2.242639 | hypothetical protein | |
| blahblah100300 | 1 | 18 | 2.409674 | Plasmid recombination enzyme type 2 | |
| blahblah100305 | 1 | 21 | 2.364059 | bleomycin binding protein | |
| blahblah100310 | 1 | 15 | -0.215253 | aminoglycoside 4'-adenylyltransferase AadD | |
| blahblah100315 | -2 | 11 | -2.820136 | transposase | |
| blahblah100320 | -1 | 13 | -3.605444 | hypothetical protein | |
| blahblah100325 | -1 | 11 | -3.693784 | glycerophosphoryl diester phosphodiesterase | |
| blahblah100330 | -1 | 10 | -4.085270 | hypothetical protein | |
| blahblah100335 | -1 | 11 | -3.531514 | PBP2a family beta-lactam-resistant peptidoglycan | |
| blahblah100340 | -1 | 10 | -3.326688 | BlaR1 family beta-lactam sensor/signal | |
| blahblah100345 | 1 | 13 | -3.010939 | mecA-type methicillin resistance repressor MecI | |
| blahblah100350 | 3 | 13 | -2.253978 | hypothetical protein | |
| blahblah100355 | 3 | 15 | -1.153169 | rhodanese | |
| blahblah100360 | 3 | 16 | -1.033000 | MBL fold hydrolase | |
| blahblah100365 | 4 | 22 | -0.438659 | dihydroneopterin aldolase | |
| blahblah100370 | 7 | 25 | -0.549040 | hypothetical protein | |
| blahblah100375 | 9 | 26 | 0.199453 | membrane protein | |
| blahblah100380 | 10 | 25 | -0.010933 | SAM-dependent methyltransferase | |
| blahblah100385 | 10 | 24 | -0.096463 | 23S rRNA (adenine(2058)-N(6))-methyltransferase | |
| blahblah100390 | 8 | 24 | 0.329990 | aminoglycoside nucleotidyltransferase ANT(9)-Ia | |
| blahblah100395 | 8 | 23 | -0.240290 | transposase | |
| blahblah100400 | 7 | 23 | 0.162261 | transposase | |
| blahblah100405 | 2 | 23 | 0.611619 | transposase | |
| blahblah100410 | 3 | 26 | 1.303967 | DNA recombinase | |
| blahblah100415 | 0 | 21 | 1.239893 | hypothetical protein | |
| blahblah100420 | 0 | 20 | 1.099795 | hypothetical protein | |
| blahblah100425 | 0 | 19 | -0.312681 | hypothetical protein | |
| blahblah100430 | -1 | 18 | -0.419878 | recombinase RecB | |
| blahblah100435 | 0 | 16 | -1.227175 | recombinase RecA | |
| blahblah100440 | 4 | 17 | -2.156808 | hypothetical protein | |
| blahblah100445 | 3 | 18 | -2.253101 | hypothetical protein | |
| blahblah100450 | 2 | 19 | -1.384188 | hypothetical protein | |
| blahblah100455 | -2 | 21 | 2.277446 | transposase | |
| blahblah100460 | -2 | 20 | 2.322970 | DNA-binding protein | |
| blahblah100465 | -4 | 22 | 2.891236 | transposase | |
| blahblah100475 | -3 | 24 | 3.984942 | DNA-binding response regulator | |
| blahblah100480 | -2 | 23 | 3.559115 | sensor histidine kinase | |
| blahblah100485 | -2 | 21 | 3.655294 | ATPase | |
| blahblah100490 | -2 | 21 | 3.513052 | potassium-transporting ATPase subunit A | |
| blahblah100495 | -1 | 19 | 2.703658 | potassium-transporting ATPase subunit B | |
| blahblah100500 | 3 | 20 | -0.421129 | hypothetical protein | |
| blahblah100510 | 4 | 22 | -1.835975 | hypothetical protein | |
| blahblah100515 | 7 | 23 | -5.266759 | hypothetical protein | |
| blahblah100520 | 5 | 21 | -4.694452 | hypothetical protein | |
| blahblah100525 | 6 | 23 | -4.975650 | kinase | |
| blahblah100530 | 8 | 22 | -5.551242 | hypothetical protein | |
| blahblah100535 | 9 | 22 | -5.100894 | hypothetical protein | |
| blahblah100540 | 7 | 20 | -4.139363 | hypothetical protein | |
| blahblah100545 | 4 | 14 | -0.997758 | hypothetical protein | |
| blahblah100550 | 5 | 15 | -1.336655 | membrane protein | |
| blahblah100555 | 5 | 14 | -1.170776 | hypothetical protein | |
| blahblah100565 | 1 | 10 | 0.153865 | dihydroneopterin aldolase | |
| blahblah100570 | 0 | 10 | 0.433409 | Zn-dependent hydrolase | |
| blahblah100575 | 3 | 14 | 0.062663 | pyridine nucleotide-disulfide oxidoreductase | |
| blahblah100580 | 0 | 13 | -1.108813 | hypothetical protein | |
| blahblah100585 | 0 | 13 | -1.133898 | tRNA-dihydrouridine synthase | |
| blahblah100590 | 0 | 14 | -2.024416 | hypothetical protein | |
| blahblah100595 | 0 | 13 | -2.048336 | transcriptional regulator | |
| blahblah100600 | 1 | 14 | -2.242093 | hypothetical protein | |
| blahblah100605 | 2 | 15 | -2.351524 | ATPase | |
| blahblah100610 | 5 | 18 | -2.790069 | hypothetical protein | |
| blahblah100615 | 7 | 18 | -2.884066 | 1-phosphatidylinositol phosphodiesterase | |
| blahblah100620 | 4 | 17 | -2.260977 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100240 | HTHFIS | 94 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100365 | PF01206 | 66 | 6e-16 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100475 | HTHFIS | 101 | 8e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100480 | PF06580 | 31 | 0.020 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100565 | PF01206 | 61 | 4e-14 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100590 | 60KDINNERMP | 26 | 0.007 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100595 | LCRVANTIGEN | 25 | 0.037 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100605 | GPOSANCHOR | 39 | 7e-05 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 2 | blahblah100705 | blahblah100810 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah100705 | -1 | 11 | 3.158369 | siderophore ABC transporter permease | |
| blahblah100710 | 0 | 11 | 2.852067 | iron ABC transporter substrate-binding protein | |
| blahblah100715 | 1 | 15 | 3.241958 | siderophore biosynthesis protein SbnA | |
| blahblah100720 | 2 | 16 | 3.542194 | 2,3-diaminopropionate biosynthesis protein SbnB | |
| blahblah100725 | 2 | 16 | 3.423080 | siderophore biosynthesis protein SbnC | |
| blahblah100730 | 1 | 16 | 3.643970 | MFS transporter | |
| blahblah100735 | 1 | 16 | 3.003282 | siderophore biosynthesis protein SbnE | |
| blahblah100740 | 0 | 15 | 2.502864 | siderophore biosynthesis protein SbnF | |
| blahblah100745 | 0 | 16 | 3.420107 | siderophore biosynthesis protein SbnG | |
| blahblah100750 | -1 | 16 | 2.321719 | diaminopimelate decarboxylase | |
| blahblah100755 | -1 | 15 | 1.041743 | siderophore biosynthesis protein SbnI | |
| blahblah100760 | -2 | 14 | 0.624338 | hypothetical protein | |
| blahblah100765 | -2 | 11 | 0.767048 | MFS transporter | |
| blahblah100770 | -1 | 12 | 0.128215 | diacetyl reductase ((S)-acetoin forming) | |
| blahblah100775 | 1 | 13 | -1.435757 | hypothetical protein | |
| blahblah100780 | 1 | 12 | -0.960162 | NAD-dependent dehydratase | |
| blahblah100785 | 2 | 11 | -0.515065 | UDP-phosphate N-acetylgalactosaminyl-1-phosphate | |
| blahblah100790 | 2 | 11 | -0.427600 | glycosyl transferase family 1 | |
| blahblah100795 | 3 | 12 | -0.717670 | ligase | |
| blahblah100800 | 3 | 10 | 0.706628 | hypothetical protein | |
| blahblah100805 | 2 | 13 | 0.883208 | Superoxide dismutase [Mn/Fe] 2 | |
| blahblah100810 | 3 | 14 | 1.638060 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100710 | FERRIBNDNGPP | 70 | 7e-16 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100720 | SYCECHAPRONE | 31 | 0.002 | Gram-negative bacterial type III secretion SycE cha... | |
>SYCECHAPRONE#Gram-negative bacterial type III secretion SycE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100725 | PF04183 | 316 | e-103 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100730 | TCRTETA | 80 | 2e-18 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100735 | PF04183 | 301 | 4e-97 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100740 | PF04183 | 514 | e-179 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100770 | DHBDHDRGNASE | 128 | 4e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100780 | NUCEPIMERASE | 217 | 9e-71 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 3 | blahblah100985 | blahblah101155 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah100985 | 2 | 18 | 1.123702 | cation transporter | |
| blahblah100990 | 2 | 16 | 2.126346 | hypothetical protein | |
| blahblah100995 | 0 | 14 | 1.955635 | hypothetical protein | |
| blahblah101000 | -1 | 14 | 1.902669 | hypothetical protein | |
| blahblah101005 | -2 | 12 | 1.991498 | sulfonate ABC transporter ATP-binding protein | |
| blahblah101010 | -2 | 11 | 1.343298 | hypothetical protein | |
| blahblah101015 | 0 | 14 | 1.437146 | sulfonate ABC transporter permease | |
| blahblah101020 | 2 | 14 | 1.349131 | butyryl-CoA dehydrogenase | |
| blahblah101025 | 2 | 14 | 1.305512 | hypothetical protein | |
| blahblah101030 | 2 | 13 | 1.376034 | formate dehydrogenase | |
| blahblah101035 | 2 | 14 | 1.675437 | MFS transporter | |
| blahblah101040 | 3 | 13 | 1.940072 | non-ribosomal peptide synthetase | |
| blahblah101045 | 2 | 14 | 2.622886 | 4'-phosphopantetheinyl transferase | |
| blahblah101050 | 2 | 15 | 2.199179 | hypothetical protein | |
| blahblah101055 | 0 | 15 | 2.109570 | acetylglutamate kinase | |
| blahblah101060 | 0 | 14 | 2.452036 | arginine biosynthesis bifunctional protein ArgJ | |
| blahblah101065 | -1 | 13 | 2.041871 | N-acetyl-gamma-glutamyl-phosphate reductase | |
| blahblah101070 | -1 | 17 | 2.732597 | ornithine aminotransferase 1 | |
| blahblah101075 | 0 | 16 | 2.358673 | branched-chain amino acid transporter II carrier | |
| blahblah101080 | 0 | 14 | 3.286783 | isochorismatase | |
| blahblah101085 | 1 | 12 | 3.619713 | pyruvate decarboxylase | |
| blahblah101090 | 0 | 13 | 3.371241 | hypothetical protein | |
| blahblah101095 | 0 | 13 | 3.047881 | PTS glucose EIICBA component | |
| blahblah101100 | -1 | 15 | 1.471381 | hypothetical protein | |
| blahblah101105 | -1 | 14 | 0.913422 | N-acetylmuramic acid 6-phosphate etherase | |
| blahblah101110 | -2 | 15 | -0.173535 | permease | |
| blahblah101115 | 1 | 16 | -1.419198 | RpiR family transcriptional regulator | |
| blahblah101120 | 1 | 14 | -1.964355 | hypothetical protein | |
| blahblah101125 | 0 | 15 | -1.509905 | type-1 restriction enzyme R protein | |
| blahblah101130 | 1 | 20 | -4.725584 | hypothetical protein | |
| blahblah101135 | 2 | 19 | -5.063419 | RND transporter | |
| blahblah101140 | 3 | 20 | -5.789477 | peptide ABC transporter ATP-binding protein | |
| blahblah101145 | 4 | 22 | -6.215898 | ABC transporter permease | |
| blahblah101150 | -1 | 14 | -4.378474 | membrane protein | |
| blahblah101155 | -2 | 13 | -4.019059 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101035 | TCRTETA | 32 | 0.004 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101040 | NUCEPIMERASE | 53 | 8e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101045 | ENTSNTHTASED | 29 | 0.009 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101055 | CARBMTKINASE | 32 | 0.002 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101080 | ISCHRISMTASE | 60 | 4e-13 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101115 | DNABINDINGHU | 30 | 0.002 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 4 | blahblah101620 | blahblah101675 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah101620 | 3 | 18 | 0.049514 | protein EsaC | |
| blahblah101625 | 2 | 17 | -0.705204 | virulence factor EsxB | |
| blahblah101630 | 2 | 18 | -1.709334 | DUF5081 domain-containing protein | |
| blahblah101635 | 2 | 19 | -1.518395 | hypothetical protein | |
| blahblah101640 | 3 | 18 | -2.149184 | hypothetical protein | |
| blahblah101645 | 6 | 21 | -4.626841 | hypothetical protein | |
| blahblah101650 | 3 | 18 | -4.940235 | DUF5079 domain-containing protein | |
| blahblah101655 | 7 | 22 | -4.393849 | DUF5080 domain-containing protein | |
| blahblah101660 | 9 | 21 | -3.918853 | hypothetical protein | |
| blahblah101665 | 11 | 18 | -4.101348 | hypothetical protein | |
| blahblah101670 | 8 | 17 | -3.807896 | hypothetical protein | |
| blahblah101675 | 2 | 14 | -2.863823 | hypothetical protein |
| 5 | blahblah101765 | blahblah101790 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah101765 | -1 | 13 | 3.325304 | RpiR family transcriptional regulator | |
| blahblah101770 | -1 | 12 | 3.564329 | N-acetylmannosamine-6-phosphate 2-epimerase | |
| blahblah101775 | -1 | 11 | 3.542111 | histidine transporter | |
| blahblah101780 | -1 | 11 | 3.731021 | lipase 2 | |
| blahblah101785 | 1 | 12 | 3.303092 | alpha/beta hydrolase | |
| blahblah101790 | 1 | 16 | 3.873105 | NADH-dependent flavin oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101770 | PHPHTRNFRASE | 27 | 0.046 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101780 | GPOSANCHOR | 47 | 1e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 6 | blahblah102010 | blahblah102110 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah102010 | 2 | 23 | -0.471154 | hypothetical protein | |
| blahblah102015 | 2 | 21 | -1.111486 | 30S ribosomal protein S6 | |
| blahblah102020 | 1 | 18 | -1.790975 | single-stranded DNA-binding protein | |
| blahblah102025 | 2 | 19 | -3.091489 | 30S ribosomal protein S18 | |
| blahblah102030 | 4 | 17 | -3.752267 | CAAX amino protease | |
| blahblah102035 | 1 | 14 | -2.163584 | hypothetical protein | |
| blahblah102040 | 2 | 15 | -2.585815 | toxin | |
| blahblah102045 | 0 | 15 | -2.040201 | hypothetical protein | |
| blahblah102050 | 0 | 16 | -2.204440 | peptidase | |
| blahblah102055 | -1 | 13 | -2.329636 | transcriptional regulator | |
| blahblah102060 | -1 | 13 | -1.911909 | membrane protein | |
| blahblah102065 | 0 | 20 | 0.442194 | hypothetical protein | |
| blahblah102070 | 0 | 21 | 1.250315 | phosphoglycerate mutase | |
| blahblah102075 | -1 | 22 | 2.139589 | hypothetical protein | |
| blahblah102080 | 1 | 20 | 3.504087 | hypothetical protein | |
| blahblah102085 | 1 | 21 | 4.276727 | hypothetical protein | |
| blahblah102090 | -1 | 17 | 2.884083 | alkyl hydroperoxide reductase subunit F | |
| blahblah102095 | 1 | 18 | 2.635344 | alkyl hydroperoxide reductase subunit C | |
| blahblah102100 | 1 | 17 | 1.755478 | NADPH-dependent oxidoreductase | |
| blahblah102105 | 2 | 18 | 1.211908 | L-cystine transporter tcyP | |
| blahblah102110 | 3 | 17 | -0.223212 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102040 | TOXICSSTOXIN | 48 | 4e-09 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102045 | PF04335 | 27 | 0.011 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102050 | adhesinb | 32 | 0.001 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| 7 | blahblah102200 | blahblah102350 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah102200 | 2 | 16 | -2.514770 | hypothetical protein | |
| blahblah102205 | 2 | 16 | -2.662222 | hypothetical protein | |
| blahblah102210 | 1 | 17 | -3.530659 | hypothetical protein | |
| blahblah102215 | 2 | 17 | -3.695547 | hypothetical protein | |
| blahblah102220 | 1 | 16 | -0.804592 | hypothetical protein | |
| blahblah102225 | 1 | 15 | -1.324352 | hypothetical protein | |
| blahblah102230 | 0 | 14 | -1.125337 | hypothetical protein | |
| blahblah102235 | 3 | 10 | -0.959286 | hypothetical protein | |
| blahblah102240 | 1 | 10 | -0.435119 | hypothetical protein | |
| blahblah102245 | 2 | 9 | -1.015953 | type I restriction-modification system subunit | |
| blahblah102250 | 8 | 14 | -3.367034 | restriction endonuclease subunit S | |
| blahblah102255 | 7 | 12 | -3.132844 | hypothetical protein | |
| blahblah102260 | 9 | 13 | -3.106383 | hypothetical protein | |
| blahblah102265 | 9 | 18 | -3.615307 | hypothetical protein | |
| blahblah102270 | 12 | 20 | -3.905511 | hypothetical protein | |
| blahblah102275 | 12 | 21 | -3.702446 | hypothetical protein | |
| blahblah102280 | 12 | 21 | -3.464405 | hypothetical protein | |
| blahblah102285 | 12 | 21 | -3.466503 | hypothetical protein | |
| blahblah102290 | 11 | 20 | -3.345137 | hypothetical protein | |
| blahblah102295 | 11 | 20 | -3.286155 | hypothetical protein | |
| blahblah102300 | 10 | 19 | -3.436649 | hypothetical protein | |
| blahblah102305 | 10 | 18 | -3.380866 | hypothetical protein | |
| blahblah102310 | 9 | 18 | -3.206256 | hypothetical protein | |
| blahblah102315 | 3 | 13 | -1.465710 | hypothetical protein | |
| blahblah102320 | 4 | 15 | -0.860820 | membrane protein | |
| blahblah102325 | 1 | 16 | 1.908087 | hypothetical protein | |
| blahblah102330 | 2 | 17 | 3.854312 | hypothetical protein | |
| blahblah102335 | 2 | 17 | 3.954076 | hypothetical protein | |
| blahblah102340 | 2 | 17 | 3.807539 | cobalamin synthesis protein CobW | |
| blahblah102345 | 3 | 17 | 3.665066 | hypothetical protein | |
| blahblah102350 | 2 | 17 | 3.193631 | NADH dehydrogenase subunit 5 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102205 | TOXICSSTOXIN | 101 | 8e-28 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102210 | TOXICSSTOXIN | 135 | 2e-41 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102220 | TOXICSSTOXIN | 192 | 1e-63 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102225 | TOXICSSTOXIN | 125 | 2e-37 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102230 | TOXICSSTOXIN | 130 | 1e-39 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102235 | TOXICSSTOXIN | 193 | 4e-64 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102255 | TOXICSSTOXIN | 108 | 4e-31 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102290 | BCTERIALGSPC | 31 | 0.002 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102305 | BCTERIALGSPC | 35 | 3e-04 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102330 | adhesinb | 27 | 0.014 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| 8 | blahblah103005 | blahblah103030 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah103005 | 4 | 18 | 0.266440 | deoxyguanosine kinase | |
| blahblah103010 | 4 | 20 | 0.854472 | tRNA-specific adenosine deaminase | |
| blahblah103015 | 4 | 18 | 0.328113 | haloacid dehalogenase | |
| blahblah103020 | 3 | 17 | -0.037597 | FMN-dependent NADPH-azoreductase | |
| blahblah103025 | 3 | 17 | 0.148391 | serine-aspartate repeat-containing protein C | |
| blahblah103030 | 2 | 16 | -0.099111 | serine-aspartate repeat-containing protein D |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah103030 | GPOSANCHOR | 36 | 0.001 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 9 | blahblah103280 | blahblah103375 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah103280 | 1 | 14 | -3.270195 | haloacid dehalogenase | |
| blahblah103290 | -1 | 12 | -3.742362 | alpha/beta hydrolase | |
| blahblah103295 | -1 | 14 | -4.209662 | hypothetical protein | |
| blahblah103300 | -2 | 14 | -4.309337 | hypothetical protein | |
| blahblah103305 | -3 | 14 | -3.448502 | lysophospholipase | |
| blahblah103310 | -1 | 13 | -2.451100 | transcriptional regulator | |
| blahblah103315 | 1 | 13 | -2.026556 | membrane protein | |
| blahblah103320 | 1 | 15 | -1.974687 | hypothetical protein | |
| blahblah103325 | 0 | 12 | -1.387663 | hypothetical protein | |
| blahblah103330 | 1 | 12 | -1.870823 | recombinase | |
| blahblah103335 | 2 | 12 | -1.639542 | cation:proton antiporter | |
| blahblah103340 | 0 | 14 | -1.462194 | Na(+)/H(+) antiporter subunit B | |
| blahblah103345 | 0 | 11 | -1.582812 | cation:proton antiporter | |
| blahblah103350 | -1 | 9 | -1.718571 | cation:proton antiporter | |
| blahblah103355 | -1 | 10 | -2.185498 | cation:proton antiporter | |
| blahblah103360 | 0 | 10 | -1.655395 | cation:proton antiporter | |
| blahblah103365 | 0 | 11 | -1.520176 | cation:proton antiporter | |
| blahblah103370 | 0 | 10 | -1.799551 | sodium:proton antiporter | |
| blahblah103375 | 2 | 11 | -1.990326 | transposase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah103360 | TCRTETB | 27 | 0.012 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 10 | blahblah103520 | blahblah103605 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah103520 | -3 | 10 | -3.540709 | 3-beta hydroxysteroid dehydrogenase | |
| blahblah103525 | -3 | 8 | -2.609304 | DNA-binding response regulator | |
| blahblah103530 | 0 | 9 | -1.661192 | sensor histidine kinase | |
| blahblah103535 | 0 | 9 | -1.764166 | ABC transporter ATP-binding protein | |
| blahblah103540 | -1 | 8 | -3.183380 | bacitracin ABC transporter permease | |
| blahblah103545 | 0 | 10 | -2.987155 | hypothetical protein | |
| blahblah103550 | 0 | 9 | -2.022452 | anion permease | |
| blahblah103555 | -1 | 12 | -2.933496 | peptidase M23 | |
| blahblah103560 | 0 | 16 | -4.452209 | hypothetical protein | |
| blahblah103565 | -1 | 16 | -4.429807 | AraC family transcriptional regulator | |
| blahblah103570 | 1 | 18 | -2.123220 | transcriptional regulator | |
| blahblah103575 | 0 | 14 | -1.163389 | transcriptional regulator | |
| blahblah103580 | 1 | 13 | -2.088038 | cupin | |
| blahblah103585 | 2 | 12 | -2.928561 | hypothetical protein | |
| blahblah103590 | 2 | 12 | -2.790615 | hypothetical protein | |
| blahblah103595 | 1 | 11 | -2.730145 | LysR family transcriptional regulator | |
| blahblah103600 | 3 | 11 | -2.970145 | MFS transporter | |
| blahblah103605 | 2 | 14 | -3.038664 | membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah103525 | HTHFIS | 64 | 5e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah103535 | PF05272 | 36 | 1e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah103600 | TCRTETA | 57 | 6e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 11 | blahblah104135 | blahblah104275 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah104135 | 2 | 31 | 3.178914 | transcriptional regulator | |
| blahblah104140 | 2 | 35 | 2.692299 | glyceraldehyde-3-phosphate dehydrogenase | |
| blahblah104145 | 1 | 31 | 2.112075 | phosphoglycerate kinase | |
| blahblah104150 | 1 | 27 | 1.978288 | triose-phosphate isomerase | |
| blahblah104155 | 0 | 18 | 1.364927 | 2,3-bisphosphoglycerate-independent | |
| blahblah104160 | -1 | 17 | 0.956105 | enolase | |
| blahblah104165 | -1 | 15 | -0.063741 | hypothetical protein | |
| blahblah104170 | -1 | 15 | -0.580867 | protein-export membrane protein SecG | |
| blahblah104175 | -1 | 15 | -0.312039 | carboxylesterase | |
| blahblah104180 | 3 | 12 | -1.307794 | ribonuclease R | |
| blahblah104185 | 5 | 17 | -4.173535 | SsrA-binding protein | |
| blahblah104190 | 7 | 18 | -5.875899 | hypothetical protein | |
| blahblah104195 | 5 | 17 | -4.537624 | hypothetical protein | |
| blahblah104200 | 7 | 18 | 2.003821 | hypothetical protein | |
| blahblah104205 | 7 | 16 | 0.575529 | DUF5067 domain-containing protein | |
| blahblah104210 | 4 | 16 | 0.960455 | hypothetical protein | |
| blahblah104215 | 4 | 15 | 0.830567 | hypothetical protein | |
| blahblah104220 | 4 | 14 | 1.291363 | acetyltransferase | |
| blahblah104225 | 4 | 15 | 1.448243 | clumping factor A | |
| blahblah104230 | 1 | 15 | -2.074858 | coagulase | |
| blahblah104235 | 2 | 16 | -1.501420 | hypothetical protein | |
| blahblah104240 | 1 | 18 | -1.622810 | hypothetical protein | |
| blahblah104245 | 2 | 20 | -1.382275 | thermonuclease | |
| blahblah104250 | 2 | 20 | -3.303969 | cold-shock protein | |
| blahblah104255 | 1 | 18 | -4.224461 | hypothetical protein | |
| blahblah104260 | 1 | 17 | -4.640889 | hypothetical protein | |
| blahblah104265 | 1 | 16 | -2.718811 | hypothetical protein | |
| blahblah104270 | 3 | 16 | -2.995151 | hypothetical protein | |
| blahblah104275 | 0 | 14 | -3.052133 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah104170 | SECGEXPORT | 44 | 1e-09 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah104220 | ALARACEMASE | 27 | 0.049 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah104225 | ICENUCLEATIN | 42 | 1e-05 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah104230 | IGASERPTASE | 31 | 0.017 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah104265 | PF05704 | 28 | 0.035 | Capsular polysaccharide synthesis protein | |
>PF05704#Capsular polysaccharide synthesis protein | |||||
| 12 | blahblah104320 | blahblah104365 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah104320 | 4 | 20 | -1.719021 | thiol reductase thioredoxin | |
| blahblah104325 | 8 | 22 | -0.965569 | arsenate reductase | |
| blahblah104330 | 9 | 22 | -0.939300 | glycine cleavage system protein H | |
| blahblah104335 | 10 | 24 | -0.421366 | hypothetical protein | |
| blahblah104340 | 10 | 24 | -0.265110 | transposase | |
| blahblah104345 | 10 | 25 | -0.010933 | transposase | |
| blahblah104350 | 9 | 25 | 0.417183 | transposase | |
| blahblah104355 | 8 | 27 | 0.805864 | aminoglycoside nucleotidyltransferase ANT(9)-Ia | |
| blahblah104360 | 6 | 28 | 0.870236 | 23S rRNA (adenine(2058)-N(6))-methyltransferase | |
| blahblah104365 | 3 | 25 | -0.576111 | SAM-dependent methyltransferase |
| 13 | blahblah104735 | blahblah104765 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah104735 | 1 | 11 | -3.951719 | O-acetyltransferase | |
| blahblah104740 | 1 | 12 | -4.141099 | chaperone protein ClpB | |
| blahblah104745 | 3 | 17 | -6.387866 | LysR family transcriptional regulator | |
| blahblah104750 | 4 | 19 | -6.177982 | 2-isopropylmalate synthase | |
| blahblah104755 | 4 | 19 | -4.050714 | hypothetical protein | |
| blahblah104760 | 2 | 14 | -0.735838 | membrane protein | |
| blahblah104765 | 2 | 14 | 1.341617 | phosphatidylethanolamine-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah104740 | IGASERPTASE | 36 | 7e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 14 | blahblah104995 | blahblah105050 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah104995 | -2 | 18 | -3.777138 | **competence protein ComK | |
| blahblah105000 | -2 | 19 | -4.180821 | hypothetical protein | |
| blahblah105005 | -1 | 14 | -5.627619 | lipoate--protein ligase A | |
| blahblah105010 | 0 | 16 | -6.095391 | DUF2187 domain-containing protein | |
| blahblah105015 | 0 | 17 | -6.161238 | CAAX amino protease | |
| blahblah105020 | 1 | 17 | -6.154899 | putative holin-like toxin | |
| blahblah105025 | 0 | 15 | -5.654519 | hypothetical protein | |
| blahblah105030 | 0 | 15 | -4.255628 | hypothetical protein | |
| blahblah105035 | -1 | 19 | -2.532390 | hypothetical protein | |
| blahblah105040 | -1 | 19 | -2.833752 | bacteriocin ABC transporter ATP-binding protein | |
| blahblah105045 | 0 | 17 | -1.721004 | hypothetical protein | |
| blahblah105050 | 3 | 16 | -0.555579 | hypothetical protein |
| 15 | blahblah105510 | blahblah105550 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah105510 | 2 | 14 | -0.992481 | phosphopantetheine adenylyltransferase | |
| blahblah105515 | 6 | 18 | -0.625579 | hypothetical protein | |
| blahblah105520 | 5 | 18 | -0.583725 | DNA-binding protein | |
| blahblah105525 | 6 | 17 | -1.610149 | hypothetical protein | |
| blahblah105530 | 5 | 14 | -1.620563 | 50S ribosomal protein L32 | |
| blahblah105535 | 4 | 13 | -1.628080 | iron-regulated surface determinant protein B | |
| blahblah105540 | 1 | 14 | -2.640609 | iron-regulated surface determinant protein A | |
| blahblah105545 | -1 | 14 | -3.240888 | iron-regulated surface determinant protein C | |
| blahblah105550 | -1 | 15 | -3.501973 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105510 | LPSBIOSNTHSS | 219 | 1e-76 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105535 | IGASERPTASE | 36 | 6e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105540 | IGASERPTASE | 34 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 16 | blahblah105635 | blahblah105765 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah105635 | 2 | 12 | 1.967499 | succinate dehydrogenase cytochrome B558 | |
| blahblah105640 | 2 | 12 | 1.979781 | succinate dehydrogenase flavoprotein subunit | |
| blahblah105645 | 0 | 14 | -0.298262 | succinate dehydrogenase iron-sulfur subunit | |
| blahblah105650 | -2 | 18 | -1.099461 | glutamate racemase | |
| blahblah105655 | -1 | 17 | -2.859386 | non-canonical purine NTP pyrophosphatase | |
| blahblah105660 | -1 | 14 | -4.514852 | metal-dependent phosphodiesterase | |
| blahblah105665 | 2 | 17 | -4.477839 | hypothetical protein | |
| blahblah105670 | 2 | 16 | -4.070829 | fibrinogen-binding protein | |
| blahblah105675 | 1 | 19 | -1.797221 | FPRL1 inhibitory protein | |
| blahblah105680 | 1 | 18 | -2.027962 | hypothetical protein | |
| blahblah105685 | 0 | 20 | -2.285848 | fibrinogen-binding protein | |
| blahblah105690 | 0 | 25 | -1.625440 | fibrinogen-binding protein | |
| blahblah105695 | 2 | 22 | -1.829402 | hypothetical protein | |
| blahblah105700 | 2 | 19 | -1.827479 | hypothetical protein | |
| blahblah105705 | 2 | 17 | -2.384917 | hypothetical protein | |
| blahblah105710 | 2 | 17 | -2.587103 | hypothetical protein | |
| blahblah105715 | 3 | 18 | -2.610182 | transposase | |
| blahblah105720 | 2 | 16 | -2.298814 | alpha-hemolysin | |
| blahblah105730 | 2 | 17 | -2.649067 | hypothetical protein | |
| blahblah105735 | 0 | 14 | -2.733262 | hypothetical protein | |
| blahblah105740 | 0 | 13 | -1.870420 | hypothetical protein | |
| blahblah105745 | 1 | 11 | -0.562159 | hypothetical protein | |
| blahblah105750 | 1 | 11 | -0.444223 | hypothetical protein | |
| blahblah105755 | 1 | 11 | -0.154996 | ornithine carbamoyltransferase | |
| blahblah105765 | 2 | 14 | 0.026967 | carbamate kinase 1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105640 | MICOLLPTASE | 30 | 0.027 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105730 | BICOMPNTOXIN | 313 | e-109 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105745 | TOXICSSTOXIN | 50 | 2e-09 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105750 | TOXICSSTOXIN | 57 | 7e-12 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105755 | TOXICSSTOXIN | 62 | 1e-13 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105765 | CARBMTKINASE | 388 | e-138 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 17 | blahblah106160 | blahblah106225 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah106160 | 2 | 11 | -1.604220 | ribonuclease HII | |
| blahblah106165 | 2 | 10 | -1.026846 | succinyl-CoA ligase subunit beta | |
| blahblah106170 | 2 | 10 | -0.931110 | succinyl-CoA ligase subunit alpha | |
| blahblah106175 | 2 | 10 | -1.651170 | cell wall hydrolase | |
| blahblah106180 | 1 | 9 | -0.620285 | methicillin resistance protein | |
| blahblah106185 | 1 | 8 | 1.009897 | DNA processing protein DprA | |
| blahblah106190 | 2 | 9 | 1.269529 | DNA topoisomerase 1 | |
| blahblah106195 | 1 | 13 | 0.925586 | methylenetetrahydrofolate--tRNA-(uracil(54)- | |
| blahblah106200 | 4 | 13 | 0.677720 | tyrosine recombinase XerC | |
| blahblah106205 | 3 | 13 | 0.913127 | HslU--HslV peptidase proteolytic subunit | |
| blahblah106210 | 6 | 20 | 0.697762 | HslU--HslV peptidase ATPase subunit | |
| blahblah106215 | 4 | 27 | 0.875626 | GTP-sensing transcriptional pleiotropic | |
| blahblah106220 | 4 | 28 | 1.590982 | hypothetical protein | |
| blahblah106225 | 3 | 22 | 0.823056 | 30S ribosomal protein S2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106175 | GPOSANCHOR | 35 | 3e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 18 | blahblah106485 | blahblah106580 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah106485 | 2 | 19 | -2.102927 | glutamine synthetase | |
| blahblah106490 | 2 | 20 | -2.655804 | hypothetical protein | |
| blahblah106495 | 6 | 26 | -8.702946 | hypothetical protein | |
| blahblah106500 | 4 | 21 | -9.069240 | hypothetical protein | |
| blahblah106505 | 4 | 23 | -8.629779 | hypothetical protein | |
| blahblah106510 | 1 | 22 | -6.572771 | hypothetical protein | |
| blahblah106515 | 1 | 26 | -6.586775 | hypothetical protein | |
| blahblah106525 | 1 | 15 | -3.853871 | hypothetical protein | |
| blahblah106530 | 3 | 17 | -4.227788 | hypothetical protein | |
| blahblah106535 | 1 | 13 | -2.999850 | phage head morphogenesis protein | |
| blahblah106540 | 2 | 14 | -3.896854 | hypothetical protein | |
| blahblah106545 | 1 | 14 | -3.813508 | threonine aldolase | |
| blahblah106550 | -1 | 14 | -4.151435 | hypothetical protein | |
| blahblah106555 | -1 | 15 | -4.966824 | cardiolipin synthase | |
| blahblah106560 | -1 | 15 | -4.775375 | antibiotic ABC transporter ATP-binding protein | |
| blahblah106565 | -2 | 16 | -5.383411 | multidrug ABC transporter permease | |
| blahblah106570 | -2 | 15 | -4.892636 | two-component sensor histidine kinase | |
| blahblah106575 | -3 | 13 | -4.590266 | DNA-binding response regulator | |
| blahblah106580 | -1 | 14 | -3.144549 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106570 | ABC2TRNSPORT | 29 | 0.016 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106575 | PF04647 | 33 | 0.001 | Accessory gene regulator B | |
>PF04647#Accessory gene regulator B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106580 | HTHFIS | 62 | 9e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 19 | blahblah106685 | blahblah106725 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah106685 | 2 | 11 | -0.509992 | hypothetical protein | |
| blahblah106690 | 3 | 12 | -2.273952 | transketolase | |
| blahblah106695 | 4 | 14 | -4.042079 | hypothetical protein | |
| blahblah106700 | 3 | 12 | -2.551303 | hypothetical protein | |
| blahblah106705 | 2 | 9 | -1.180390 | membrane protein | |
| blahblah106710 | 2 | 9 | -1.116122 | exonuclease sbcCD subunit D | |
| blahblah106715 | 2 | 10 | -0.831507 | nuclease SbcCD subunit C | |
| blahblah106720 | 2 | 13 | 1.353559 | large-conductance mechanosensitive channel | |
| blahblah106725 | 2 | 13 | 1.549486 | glycine/betaine ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106690 | CHANLCOLICIN | 30 | 0.041 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106715 | FbpA_PF05833 | 34 | 0.005 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106720 | MECHCHANNEL | 145 | 2e-48 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| 20 | blahblah107160 | blahblah107190 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah107160 | 13 | 13 | 2.044115 | hypothetical protein | |
| blahblah107165 | 10 | 12 | 2.202483 | zinc-finger domain-containing protein | |
| blahblah107170 | 10 | 12 | 2.105519 | membrane protein | |
| blahblah107175 | 9 | 11 | 2.156551 | hypothetical protein | |
| blahblah107180 | 9 | 11 | 2.167110 | ribonuclease H | |
| blahblah107185 | 9 | 11 | 2.197684 | hypothetical protein | |
| blahblah107190 | 4 | 9 | 1.794676 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107185 | CHANLCOLICIN | 33 | 0.040 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107190 | GPOSANCHOR | 61 | 8e-11 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 21 | blahblah107735 | blahblah107785 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah107735 | 3 | 18 | -5.119547 | aminomethyltransferase | |
| blahblah107740 | 4 | 22 | -6.534128 | shikimate kinase | |
| blahblah107745 | 3 | 23 | -6.696098 | hypothetical protein | |
| blahblah107750 | 2 | 21 | -5.306176 | competence protein ComGF | |
| blahblah107755 | 1 | 19 | -4.262854 | hypothetical protein | |
| blahblah107760 | 0 | 17 | -4.043297 | prepilin-type N-terminal cleavage/methylation | |
| blahblah107765 | 1 | 13 | -2.476396 | competence protein ComGC | |
| blahblah107770 | 1 | 15 | -2.559600 | competence protein ComGB | |
| blahblah107775 | -1 | 12 | -2.725891 | hypothetical protein | |
| blahblah107780 | 0 | 14 | -3.076223 | hydroxyacylglutathione hydrolase | |
| blahblah107785 | -1 | 11 | -3.257471 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107760 | BCTERIALGSPH | 40 | 5e-07 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107765 | BCTERIALGSPG | 46 | 9e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107770 | BCTERIALGSPF | 84 | 4e-20 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107780 | SHIGARICIN | 27 | 0.039 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| 22 | blahblah107980 | blahblah108005 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah107980 | -1 | 11 | -3.223746 | elongation factor 4 | |
| blahblah107985 | -1 | 15 | -4.505733 | 30S ribosomal protein S20 | |
| blahblah107990 | -1 | 14 | -4.330921 | DNA polymerase III subunit delta | |
| blahblah107995 | -1 | 14 | -3.574895 | DNA internalization-related competence protein | |
| blahblah108000 | 2 | 16 | -1.777813 | ComE operon protein 2 | |
| blahblah108005 | 2 | 16 | -2.207963 | competence protein ComE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107980 | TCRTETOQM | 184 | 2e-52 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah108005 | IGASERPTASE | 28 | 0.034 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 23 | blahblah108270 | blahblah108345 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah108270 | 2 | 15 | 1.050830 | Holliday junction ATP-dependent DNA helicase | |
| blahblah108275 | 0 | 13 | 0.264650 | hypothetical protein | |
| blahblah108280 | 0 | 12 | 0.161474 | GTPase ObgE | |
| blahblah108285 | 0 | 13 | -1.128288 | 50S ribosomal protein L27 | |
| blahblah108290 | -2 | 12 | -2.406021 | hypothetical protein | |
| blahblah108295 | 0 | 13 | -2.125135 | 50S ribosomal protein L21 | |
| blahblah108300 | -1 | 18 | -1.682451 | rod shape-determining protein MreD | |
| blahblah108305 | 3 | 19 | -0.975588 | rod shape-determining protein MreC | |
| blahblah108310 | 4 | 24 | 0.480702 | hypothetical protein | |
| blahblah108315 | 5 | 24 | -0.143369 | DUF4930 domain-containing protein | |
| blahblah108320 | 9 | 24 | 0.502426 | hypothetical protein | |
| blahblah108325 | 10 | 25 | -0.010933 | SAM-dependent methyltransferase | |
| blahblah108330 | 10 | 23 | -0.339372 | 23S rRNA (adenine(2058)-N(6))-methyltransferase | |
| blahblah108335 | 9 | 23 | -0.858339 | aminoglycoside nucleotidyltransferase ANT(9)-Ia | |
| blahblah108340 | 8 | 22 | -1.547451 | transposase | |
| blahblah108345 | 4 | 19 | -1.222424 | transposase |
| 24 | blahblah108775 | blahblah108800 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah108775 | 2 | 12 | -0.215123 | acetoin utilization protein AcuC | |
| blahblah108780 | 5 | 14 | -0.585057 | catabolite control protein A | |
| blahblah108785 | 5 | 17 | -1.093849 | hypothetical protein | |
| blahblah108790 | 3 | 12 | -0.259256 | bifunctional 3-deoxy-7-phosphoheptulonate | |
| blahblah108795 | 4 | 12 | -0.512474 | hypothetical protein | |
| blahblah108800 | 3 | 13 | -0.659029 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah108800 | IGASERPTASE | 40 | 1e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 25 | blahblah108970 | blahblah109020 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah108970 | 0 | 19 | -3.311105 | arsenical pump membrane protein | |
| blahblah108975 | -1 | 16 | -4.466218 | autolysin | |
| blahblah108980 | 1 | 13 | -3.684100 | hypothetical protein | |
| blahblah108985 | 2 | 14 | -4.091197 | RNA polymerase sigma factor SigS | |
| blahblah108990 | 2 | 16 | -3.338309 | competence protein ComK | |
| blahblah108995 | 3 | 15 | -3.048934 | hypothetical protein | |
| blahblah109000 | 2 | 15 | -2.761054 | CAAX amino protease | |
| blahblah109005 | 0 | 19 | -2.283846 | transaldolase | |
| blahblah109010 | 1 | 19 | -3.706868 | hypothetical protein | |
| blahblah109015 | 1 | 23 | -3.097511 | camphor resistance protein CrcB | |
| blahblah109020 | 2 | 16 | -2.131815 | camphor resistance protein CrcB |
| 26 | blahblah109120 | blahblah109260 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah109120 | 6 | 18 | -3.869026 | integrase | |
| blahblah109125 | 2 | 17 | -0.038143 | hypothetical protein | |
| blahblah109130 | 1 | 17 | -0.035337 | hypothetical protein | |
| blahblah109135 | -1 | 14 | 0.038479 | hypothetical protein | |
| blahblah109140 | -1 | 13 | 0.032100 | transposase | |
| blahblah109145 | -1 | 13 | 0.200334 | specificity determinant HsdS | |
| blahblah109150 | -1 | 13 | 1.443952 | type I restriction-modification system subunit | |
| blahblah109155 | 3 | 11 | -0.602950 | hypothetical protein | |
| blahblah109160 | 2 | 10 | -0.540989 | serine protease SplF | |
| blahblah109165 | 2 | 11 | -1.344559 | serine protease SplD | |
| blahblah109170 | 1 | 13 | -1.844932 | serine protease SplC | |
| blahblah109175 | 0 | 14 | -3.045330 | serine protease SplB | |
| blahblah109180 | 2 | 16 | -4.482152 | serine protease SplA | |
| blahblah109185 | 2 | 15 | -4.393718 | hypothetical protein | |
| blahblah109190 | 2 | 12 | -3.584621 | hypothetical protein | |
| blahblah109195 | 2 | 14 | -3.535536 | hypothetical protein | |
| blahblah109200 | 3 | 15 | -4.462166 | hypothetical protein | |
| blahblah109205 | 4 | 14 | -4.103074 | hypothetical protein | |
| blahblah109210 | 3 | 14 | -3.814123 | leucotoxin LukDv | |
| blahblah109215 | 4 | 17 | -4.919852 | gamma-hemolysin subunit A | |
| blahblah114325 | 7 | 21 | -6.304131 | hypothetical protein | |
| blahblah109220 | 7 | 19 | -6.829760 | hypothetical protein | |
| blahblah109225 | 9 | 19 | -6.514431 | hypothetical protein | |
| blahblah109230 | 7 | 19 | -6.840201 | hypothetical protein | |
| blahblah109235 | 8 | 21 | -7.053910 | enterotoxin | |
| blahblah109240 | 8 | 22 | -6.787291 | exotoxin | |
| blahblah109245 | 6 | 20 | -7.100286 | enterotoxin | |
| blahblah109250 | 5 | 17 | -5.724418 | enterotoxin | |
| blahblah109255 | 3 | 15 | -5.351528 | enterotoxin | |
| blahblah109260 | 2 | 13 | -3.106686 | exotoxin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109160 | V8PROTEASE | 115 | 6e-33 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109165 | V8PROTEASE | 112 | 1e-31 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109170 | V8PROTEASE | 178 | 7e-57 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109175 | V8PROTEASE | 177 | 2e-56 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109180 | V8PROTEASE | 138 | 1e-41 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109210 | BICOMPNTOXIN | 396 | e-141 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109215 | BICOMPNTOXIN | 433 | e-156 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109240 | BACTRLTOXIN | 195 | 4e-64 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109245 | BACTRLTOXIN | 155 | 9e-49 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109250 | BACTRLTOXIN | 152 | 2e-49 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109255 | BACTRLTOXIN | 108 | 3e-32 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109260 | BACTRLTOXIN | 108 | 2e-30 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109265 | BACTRLTOXIN | 123 | 2e-36 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| 27 | blahblah109360 | blahblah109385 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah109360 | 3 | 10 | -2.532559 | cell-cycle regulation protein HIT | |
| blahblah109365 | 2 | 10 | -2.686819 | hypothetical protein | |
| blahblah109370 | 3 | 10 | -2.966247 | hypothetical protein | |
| blahblah109375 | 5 | 11 | -2.348454 | foldase | |
| blahblah109380 | 3 | 9 | -2.491067 | 3'-5' exoribonuclease YhaM | |
| blahblah109385 | 2 | 10 | -2.832419 | DNA double-strand break repair Rad50 ATPase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109380 | SSPANPROTEIN | 29 | 0.035 | Salmonella invasion protein InvJ signature. | |
>SSPANPROTEIN#Salmonella invasion protein InvJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109385 | cloacin | 36 | 7e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 28 | blahblah109985 | blahblah110100 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah109985 | 0 | 13 | -3.115505 | hypothetical protein | |
| blahblah109990 | 0 | 11 | -3.427280 | choloylglycine hydrolase | |
| blahblah109995 | -1 | 11 | -4.632599 | hypothetical protein | |
| blahblah110000 | 0 | 11 | -5.069527 | hypothetical protein | |
| blahblah110005 | 1 | 11 | -4.541673 | membrane protein | |
| blahblah110010 | 1 | 12 | -4.113588 | thioredoxin | |
| blahblah110015 | 0 | 13 | -4.733535 | membrane protein | |
| blahblah110020 | 2 | 15 | -4.195414 | antibiotic ABC transporter ATP-binding protein | |
| blahblah110025 | 0 | 13 | -2.586936 | membrane protein | |
| blahblah110030 | 0 | 14 | -2.057315 | sodium ABC transporter ATP-binding protein | |
| blahblah110035 | -1 | 14 | -3.501412 | GntR family transcriptional regulator | |
| blahblah110040 | 0 | 15 | -3.673248 | hypothetical protein | |
| blahblah110045 | 0 | 15 | -3.526931 | hypothetical protein | |
| blahblah110050 | 0 | 14 | -3.614031 | hypothetical protein | |
| blahblah110055 | 2 | 15 | -5.763090 | MAP domain-containing protein | |
| blahblah110060 | 3 | 15 | -5.510054 | protein map | |
| blahblah110065 | 5 | 18 | -4.944776 | hypothetical protein | |
| blahblah110070 | 4 | 19 | -3.537637 | hypothetical protein | |
| blahblah110075 | 3 | 17 | -2.686011 | hypothetical protein | |
| blahblah110080 | 2 | 15 | -1.461145 | hypothetical protein | |
| blahblah110085 | 3 | 15 | -0.968406 | hypothetical protein | |
| blahblah110090 | 4 | 17 | -0.456380 | chemotaxis inhibitory protein | |
| blahblah110095 | 4 | 17 | -0.571396 | staphylokinase | |
| blahblah110100 | 2 | 16 | -1.043100 | CHAP domain-containing protein |
| 29 | blahblah110150 | blahblah110240 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah110150 | 3 | 15 | 2.229328 | phage tail tape measure protein | |
| blahblah110155 | 2 | 14 | 2.154129 | hypothetical protein | |
| blahblah110165 | 5 | 16 | -0.621235 | phage tail protein | |
| blahblah110170 | 5 | 20 | -0.633593 | hypothetical protein | |
| blahblah110175 | 3 | 17 | -0.450160 | hypothetical protein | |
| blahblah110180 | 1 | 17 | 0.726527 | phage head-tail adapter protein | |
| blahblah110185 | 2 | 17 | 0.051184 | phage head-tail adapter protein | |
| blahblah110190 | 1 | 17 | -0.022705 | hypothetical protein | |
| blahblah110195 | 0 | 17 | 0.124750 | phage capsid protein | |
| blahblah110200 | 0 | 17 | -0.006217 | peptidase | |
| blahblah110205 | 0 | 19 | -0.367083 | phage portal protein | |
| blahblah110215 | 1 | 23 | -0.693860 | terminase | |
| blahblah110220 | 6 | 29 | 0.011651 | hypothetical protein | |
| blahblah110225 | 7 | 33 | -0.699504 | HNH endonuclease | |
| blahblah110230 | 6 | 33 | -0.628597 | hypothetical protein | |
| blahblah110235 | 5 | 30 | -0.551607 | hypothetical protein | |
| blahblah110240 | 3 | 30 | 0.685888 | transcriptional activator RinB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110155 | TYPE4SSCAGA | 36 | 0.001 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 30 | blahblah110285 | blahblah110430 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah110285 | 2 | 19 | -0.680120 | hypothetical protein | |
| blahblah110290 | 3 | 19 | -0.555291 | replication protein DnaD | |
| blahblah110295 | 4 | 18 | -0.789130 | single-stranded DNA-binding protein | |
| blahblah110300 | 4 | 18 | -1.081065 | MBL fold metallo-hydrolase | |
| blahblah110305 | 5 | 19 | -1.271874 | recombinase | |
| blahblah110310 | 5 | 19 | -2.277238 | ATPase | |
| blahblah110315 | 3 | 24 | -1.585444 | hypothetical protein | |
| blahblah110320 | 1 | 22 | -0.173535 | hypothetical protein | |
| blahblah110325 | 1 | 21 | -0.126980 | hypothetical protein | |
| blahblah110330 | 1 | 21 | 0.371424 | hypothetical protein | |
| blahblah110335 | 3 | 17 | -0.733759 | hypothetical protein | |
| blahblah110340 | 5 | 20 | -0.707281 | hypothetical protein | |
| blahblah110345 | 5 | 22 | -0.350261 | oxidoreductase | |
| blahblah110350 | 6 | 22 | -3.567658 | hypothetical protein | |
| blahblah110355 | 6 | 22 | -4.422148 | hypothetical protein | |
| blahblah110360 | 6 | 22 | -5.471632 | transcriptional regulator | |
| blahblah110365 | 5 | 21 | -5.587324 | transcriptional regulator | |
| blahblah110370 | 5 | 24 | -5.763414 | ATP-dependent helicase | |
| blahblah110375 | 5 | 21 | -5.894727 | hypothetical protein | |
| blahblah110380 | 2 | 20 | -4.212262 | hypothetical protein | |
| blahblah110385 | 1 | 15 | -3.646728 | glycosyl transferase family A | |
| blahblah110390 | 0 | 14 | -3.524300 | hypothetical protein | |
| blahblah110395 | -1 | 14 | -2.079883 | site-specific integrase | |
| blahblah110400 | 0 | 14 | -2.338037 | sphingomyelin phosphodiesterase | |
| blahblah110405 | 1 | 13 | -2.692631 | gamma-hemolysin subunit B | |
| blahblah110410 | 1 | 12 | -3.257235 | succinyl-diaminopimelate desuccinylase | |
| blahblah110415 | 1 | 14 | -3.505105 | succinyl-diaminopimelate desuccinylase | |
| blahblah110420 | 3 | 16 | -3.273873 | potassium transporter KtrB | |
| blahblah110425 | 5 | 15 | -3.408325 | exotoxin | |
| blahblah110430 | 2 | 15 | -2.982827 | enterotoxin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110310 | CHANLCOLICIN | 34 | 0.002 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110410 | BICOMPNTOXIN | 214 | 8e-70 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110415 | BICOMPNTOXIN | 165 | 2e-50 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110430 | BACTRLTOXIN | 118 | 1e-34 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110435 | BACTRLTOXIN | 396 | e-143 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| 31 | blahblah110495 | blahblah110570 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah110495 | 2 | 23 | -1.273487 | hypothetical protein | |
| blahblah110500 | 6 | 23 | -4.392944 | hypothetical protein | |
| blahblah110505 | 3 | 22 | -2.726416 | hypothetical protein | |
| blahblah110510 | 2 | 15 | -0.149432 | hypothetical protein | |
| blahblah110515 | 1 | 13 | 0.176360 | excisionase | |
| blahblah110520 | 1 | 13 | -0.513021 | transcriptional regulator | |
| blahblah110525 | -2 | 11 | 0.314100 | transcriptional regulator | |
| blahblah110530 | -2 | 11 | 0.809957 | site-specific integrase | |
| blahblah110535 | -1 | 12 | 0.693245 | molecular chaperone GroEL | |
| blahblah110540 | 3 | 13 | -0.879417 | co-chaperone GroES | |
| blahblah110545 | 3 | 12 | -1.952287 | CAAX amino protease | |
| blahblah110550 | 3 | 13 | -1.372165 | hypothetical protein | |
| blahblah110555 | -1 | 13 | -4.147437 | nitroreductase | |
| blahblah110560 | 0 | 11 | -4.130785 | hydrolase | |
| blahblah110565 | 0 | 13 | -4.971333 | delta-hemolysin | |
| blahblah110570 | 0 | 14 | -3.238244 | accessory gene regulator protein B |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110550 | TONBPROTEIN | 46 | 7e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110570 | PF04647 | 130 | 2e-40 | Accessory gene regulator B | |
>PF04647#Accessory gene regulator B | |||||
| 32 | blahblah111190 | blahblah111350 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah111190 | 8 | 23 | -0.314692 | SAM-dependent methyltransferase | |
| blahblah111195 | 10 | 25 | -0.010933 | 23S rRNA (adenine(2058)-N(6))-methyltransferase | |
| blahblah111200 | 9 | 21 | -0.966756 | aminoglycoside nucleotidyltransferase ANT(9)-Ia | |
| blahblah111205 | 9 | 21 | -1.051803 | transposase | |
| blahblah111210 | 6 | 17 | -1.521352 | transposase | |
| blahblah111215 | 4 | 17 | -1.047791 | transposase | |
| blahblah111220 | 0 | 13 | -0.684028 | hypothetical protein | |
| blahblah111225 | 0 | 15 | 0.261854 | haloacid dehalogenase | |
| blahblah111230 | -2 | 11 | 0.826465 | iron ABC transporter ATP-binding protein | |
| blahblah111235 | -2 | 11 | 0.978173 | glutamine--fructose-6-phosphate | |
| blahblah111240 | -1 | 13 | 0.941421 | PTS mannitol transporter subunit IICB | |
| blahblah111245 | 7 | 15 | 1.354186 | PTS lactose transporter subunit IIB | |
| blahblah111250 | 7 | 13 | 1.303349 | mannitol-specific phosphotransferase enzyme IIA | |
| blahblah111255 | 8 | 12 | 0.848091 | mannitol-1-phosphate 5-dehydrogenase | |
| blahblah111260 | 9 | 15 | 0.968188 | FmtB protein | |
| blahblah111265 | 8 | 15 | 0.718114 | phosphoglucosamine mutase | |
| blahblah111270 | 9 | 15 | 0.697101 | hypothetical protein | |
| blahblah111275 | 2 | 14 | -0.281307 | ABC transporter permease | |
| blahblah111280 | 2 | 15 | -0.597607 | arginase | |
| blahblah111285 | 2 | 17 | -0.657912 | ******chromosome partitioning protein ParA | |
| blahblah111290 | 3 | 16 | -1.366647 | MFS transporter | |
| blahblah111340 | 4 | 14 | -1.302826 | multidrug resistance efflux pump SepA | |
| blahblah111345 | 2 | 12 | -1.335200 | MFS transporter | |
| blahblah111350 | 2 | 13 | -1.979164 | hemolysin III |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111240 | PF05272 | 29 | 0.017 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111270 | IGASERPTASE | 45 | 7e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111350 | TCRTETB | 144 | 2e-40 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111360 | TCRTETB | 103 | 5e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 33 | blahblah113015 | blahblah113135 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah113015 | 3 | 14 | -2.347448 | hypothetical protein | |
| blahblah113020 | 3 | 16 | -1.554395 | hypothetical protein | |
| blahblah113025 | 5 | 15 | -1.569133 | hypothetical protein | |
| blahblah113030 | 7 | 17 | -2.193033 | hypothetical protein | |
| blahblah113035 | 7 | 17 | -2.294747 | hypothetical protein | |
| blahblah113040 | 7 | 17 | -3.786588 | membrane protein | |
| blahblah113045 | 7 | 16 | -3.651168 | hypothetical protein | |
| blahblah113050 | 5 | 15 | -3.390878 | hypothetical protein | |
| blahblah113055 | 3 | 14 | -3.392131 | hypothetical protein | |
| blahblah113065 | 1 | 15 | -3.755095 | DNA mismatch repair protein MutT | |
| blahblah113070 | -1 | 16 | -2.074707 | phosphoglucomutase | |
| blahblah113075 | -2 | 14 | -1.051148 | hypothetical protein | |
| blahblah113080 | 4 | 20 | -1.326223 | hypothetical protein | |
| blahblah113085 | 4 | 20 | -2.132341 | hypothetical protein | |
| blahblah113090 | 6 | 21 | -2.984141 | hypothetical protein | |
| blahblah113095 | 4 | 16 | -1.677983 | hypothetical protein | |
| blahblah113100 | 5 | 13 | -1.611970 | transcriptional regulator | |
| blahblah113105 | 3 | 10 | -0.413247 | transcriptional regulator | |
| blahblah113110 | 3 | 11 | 1.053459 | UTP--glucose-1-phosphate uridylyltransferase | |
| blahblah113115 | 3 | 11 | 1.383029 | transposase | |
| blahblah113120 | 3 | 11 | 2.012322 | fibronectin-binding protein A | |
| blahblah113125 | 2 | 11 | 2.048440 | fibronectin-binding protein A | |
| blahblah113130 | 1 | 10 | 3.065800 | hypothetical protein | |
| blahblah113135 | 0 | 11 | 3.043381 | gluconate permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113100 | V8PROTEASE | 34 | 2e-04 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113105 | GPOSANCHOR | 30 | 0.014 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113130 | TONBPROTEIN | 51 | 6e-09 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113135 | PF03544 | 58 | 3e-11 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 34 | blahblah113630 | blahblah113695 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah113630 | 2 | 15 | 0.593427 | peptidase | |
| blahblah113635 | 5 | 22 | -1.020096 | SAM-dependent methyltransferase | |
| blahblah113640 | 9 | 23 | -0.391919 | 23S rRNA (adenine(2058)-N(6))-methyltransferase | |
| blahblah113645 | 10 | 25 | -0.010933 | aminoglycoside nucleotidyltransferase ANT(9)-Ia | |
| blahblah113650 | 10 | 24 | -0.396624 | transposase | |
| blahblah113655 | 9 | 24 | -0.332549 | transposase | |
| blahblah113660 | 6 | 21 | -0.310790 | transposase | |
| blahblah113665 | 3 | 18 | 0.367884 | aspartate 1-decarboxylase | |
| blahblah113670 | -2 | 16 | 1.046248 | pantoate--beta-alanine ligase | |
| blahblah113675 | -2 | 13 | 2.006698 | 3-methyl-2-oxobutanoate | |
| blahblah113680 | 0 | 11 | 2.533298 | 2-dehydropantoate 2-reductase | |
| blahblah113685 | -1 | 11 | 2.422094 | alpha-acetolactate decarboxylase | |
| blahblah113690 | 0 | 12 | 2.752903 | L-lactate dehydrogenase | |
| blahblah113695 | 0 | 10 | 3.203372 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113635 | SUBTILISIN | 28 | 0.026 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| 35 | blahblah100710 | blahblah100740 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah100710 | 0 | 11 | 2.852067 | iron ABC transporter substrate-binding protein | |
| blahblah100715 | 1 | 15 | 3.241958 | siderophore biosynthesis protein SbnA | |
| blahblah100720 | 2 | 16 | 3.542194 | 2,3-diaminopropionate biosynthesis protein SbnB | |
| blahblah100725 | 2 | 16 | 3.423080 | siderophore biosynthesis protein SbnC | |
| blahblah100730 | 1 | 16 | 3.643970 | MFS transporter | |
| blahblah100735 | 1 | 16 | 3.003282 | siderophore biosynthesis protein SbnE | |
| blahblah100740 | 0 | 15 | 2.502864 | siderophore biosynthesis protein SbnF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100710 | FERRIBNDNGPP | 70 | 7e-16 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100720 | SYCECHAPRONE | 31 | 0.002 | Gram-negative bacterial type III secretion SycE cha... | |
>SYCECHAPRONE#Gram-negative bacterial type III secretion SycE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100725 | PF04183 | 316 | e-103 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100730 | TCRTETA | 80 | 2e-18 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100735 | PF04183 | 301 | 4e-97 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah100740 | PF04183 | 514 | e-179 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| 36 | blahblah101035 | blahblah101055 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah101035 | 2 | 14 | 1.675437 | MFS transporter | |
| blahblah101040 | 3 | 13 | 1.940072 | non-ribosomal peptide synthetase | |
| blahblah101045 | 2 | 14 | 2.622886 | 4'-phosphopantetheinyl transferase | |
| blahblah101050 | 2 | 15 | 2.199179 | hypothetical protein | |
| blahblah101055 | 0 | 15 | 2.109570 | acetylglutamate kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101035 | TCRTETA | 32 | 0.004 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101040 | NUCEPIMERASE | 53 | 8e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101045 | ENTSNTHTASED | 29 | 0.009 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101055 | CARBMTKINASE | 32 | 0.002 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 37 | blahblah101255 | blahblah101295 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah101255 | 1 | 18 | 1.560268 | hexose phosphate transporter | |
| blahblah101260 | 1 | 15 | 0.472027 | DNA-binding response regulator | |
| blahblah101265 | 0 | 15 | 0.533179 | histidine kinase | |
| blahblah101270 | -2 | 15 | 0.918141 | iron ABC transporter substrate-binding protein | |
| blahblah101275 | -1 | 16 | 0.979243 | formate acetyltransferase | |
| blahblah101280 | -3 | 12 | -0.311032 | pyruvate formate-lyase-activating enzyme | |
| blahblah101285 | -2 | 11 | 1.475016 | glycerophosphoryl diester phosphodiesterase | |
| blahblah101290 | -2 | 14 | 3.615099 | hypothetical protein | |
| blahblah101295 | -2 | 15 | 4.227337 | coagulase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101255 | TCRTETA | 37 | 9e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101260 | HTHFIS | 81 | 2e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101265 | PF06580 | 147 | 6e-42 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101275 | SHAPEPROTEIN | 32 | 0.006 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah101295 | IGASERPTASE | 32 | 0.009 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 38 | blahblah102180 | blahblah102255 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah102180 | -2 | 14 | -0.707054 | NAD(P)-dependent oxidoreductase | |
| blahblah102185 | 1 | 18 | -1.300633 | hypothetical protein | |
| blahblah102190 | 0 | 17 | -1.202830 | hypothetical protein | |
| blahblah102195 | 1 | 18 | -1.018085 | hypothetical protein | |
| blahblah102200 | 2 | 16 | -2.514770 | hypothetical protein | |
| blahblah102205 | 2 | 16 | -2.662222 | hypothetical protein | |
| blahblah102210 | 1 | 17 | -3.530659 | hypothetical protein | |
| blahblah102215 | 2 | 17 | -3.695547 | hypothetical protein | |
| blahblah102220 | 1 | 16 | -0.804592 | hypothetical protein | |
| blahblah102225 | 1 | 15 | -1.324352 | hypothetical protein | |
| blahblah102230 | 0 | 14 | -1.125337 | hypothetical protein | |
| blahblah102235 | 3 | 10 | -0.959286 | hypothetical protein | |
| blahblah102240 | 1 | 10 | -0.435119 | hypothetical protein | |
| blahblah102245 | 2 | 9 | -1.015953 | type I restriction-modification system subunit | |
| blahblah102250 | 8 | 14 | -3.367034 | restriction endonuclease subunit S | |
| blahblah102255 | 7 | 12 | -3.132844 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102180 | NUCEPIMERASE | 30 | 0.009 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102185 | TOXICSSTOXIN | 95 | 3e-26 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102190 | TOXICSSTOXIN | 87 | 5e-23 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102195 | TOXICSSTOXIN | 94 | 2e-24 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102205 | TOXICSSTOXIN | 101 | 8e-28 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102210 | TOXICSSTOXIN | 135 | 2e-41 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102220 | TOXICSSTOXIN | 192 | 1e-63 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102225 | TOXICSSTOXIN | 125 | 2e-37 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102230 | TOXICSSTOXIN | 130 | 1e-39 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102235 | TOXICSSTOXIN | 193 | 4e-64 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah102255 | TOXICSSTOXIN | 108 | 4e-31 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| 39 | blahblah105720 | blahblah105765 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah105720 | 2 | 16 | -2.298814 | alpha-hemolysin | |
| blahblah105730 | 2 | 17 | -2.649067 | hypothetical protein | |
| blahblah105735 | 0 | 14 | -2.733262 | hypothetical protein | |
| blahblah105740 | 0 | 13 | -1.870420 | hypothetical protein | |
| blahblah105745 | 1 | 11 | -0.562159 | hypothetical protein | |
| blahblah105750 | 1 | 11 | -0.444223 | hypothetical protein | |
| blahblah105755 | 1 | 11 | -0.154996 | ornithine carbamoyltransferase | |
| blahblah105765 | 2 | 14 | 0.026967 | carbamate kinase 1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105730 | BICOMPNTOXIN | 313 | e-109 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105745 | TOXICSSTOXIN | 50 | 2e-09 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105750 | TOXICSSTOXIN | 57 | 7e-12 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105755 | TOXICSSTOXIN | 62 | 1e-13 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah105765 | CARBMTKINASE | 388 | e-138 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 40 | blahblah106085 | blahblah106115 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah106085 | 1 | 11 | -0.143341 | beta-ketoacyl-ACP reductase | |
| blahblah106090 | 3 | 11 | -0.848559 | hypothetical protein | |
| blahblah106095 | 1 | 11 | -0.347215 | acyl carrier protein | |
| blahblah106100 | 1 | 11 | -0.266533 | ribonuclease 3 | |
| blahblah106105 | 1 | 11 | -0.447545 | chromosome segregation protein SMC | |
| blahblah106110 | 0 | 14 | 0.564720 | signal recognition particle-docking protein | |
| blahblah106115 | 1 | 15 | 0.806857 | DNA-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106085 | DHBDHDRGNASE | 144 | 1e-44 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106095 | ACRIFLAVINRP | 26 | 0.012 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106105 | GPOSANCHOR | 55 | 2e-09 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106110 | SUBTILISIN | 36 | 3e-04 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah106115 | BONTOXILYSIN | 26 | 0.037 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| 41 | blahblah107760 | blahblah107800 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah107760 | 0 | 17 | -4.043297 | prepilin-type N-terminal cleavage/methylation | |
| blahblah107765 | 1 | 13 | -2.476396 | competence protein ComGC | |
| blahblah107770 | 1 | 15 | -2.559600 | competence protein ComGB | |
| blahblah107775 | -1 | 12 | -2.725891 | hypothetical protein | |
| blahblah107780 | 0 | 14 | -3.076223 | hydroxyacylglutathione hydrolase | |
| blahblah107785 | -1 | 11 | -3.257471 | hypothetical protein | |
| blahblah107790 | -1 | 10 | -2.091343 | glucokinase | |
| blahblah107795 | 0 | 12 | -2.276522 | hypothetical protein | |
| blahblah107800 | -1 | 12 | -2.288738 | rhomboid family intramembrane serine protease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107760 | BCTERIALGSPH | 40 | 5e-07 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107765 | BCTERIALGSPG | 46 | 9e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107770 | BCTERIALGSPF | 84 | 4e-20 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107780 | SHIGARICIN | 27 | 0.039 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107790 | PF03309 | 30 | 0.012 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah107800 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 42 | blahblah109160 | blahblah109180 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah109160 | 2 | 10 | -0.540989 | serine protease SplF | |
| blahblah109165 | 2 | 11 | -1.344559 | serine protease SplD | |
| blahblah109170 | 1 | 13 | -1.844932 | serine protease SplC | |
| blahblah109175 | 0 | 14 | -3.045330 | serine protease SplB | |
| blahblah109180 | 2 | 16 | -4.482152 | serine protease SplA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109160 | V8PROTEASE | 115 | 6e-33 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109165 | V8PROTEASE | 112 | 1e-31 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109170 | V8PROTEASE | 178 | 7e-57 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109175 | V8PROTEASE | 177 | 2e-56 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109180 | V8PROTEASE | 138 | 1e-41 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 43 | blahblah109210 | blahblah109265 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah109210 | 3 | 14 | -3.814123 | leucotoxin LukDv | |
| blahblah109215 | 4 | 17 | -4.919852 | gamma-hemolysin subunit A | |
| blahblah114325 | 7 | 21 | -6.304131 | hypothetical protein | |
| blahblah109220 | 7 | 19 | -6.829760 | hypothetical protein | |
| blahblah109225 | 9 | 19 | -6.514431 | hypothetical protein | |
| blahblah109230 | 7 | 19 | -6.840201 | hypothetical protein | |
| blahblah109235 | 8 | 21 | -7.053910 | enterotoxin | |
| blahblah109240 | 8 | 22 | -6.787291 | exotoxin | |
| blahblah109245 | 6 | 20 | -7.100286 | enterotoxin | |
| blahblah109250 | 5 | 17 | -5.724418 | enterotoxin | |
| blahblah109255 | 3 | 15 | -5.351528 | enterotoxin | |
| blahblah109260 | 2 | 13 | -3.106686 | exotoxin | |
| blahblah109265 | 0 | 11 | -1.806454 | exotoxin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109210 | BICOMPNTOXIN | 396 | e-141 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109215 | BICOMPNTOXIN | 433 | e-156 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109240 | BACTRLTOXIN | 195 | 4e-64 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109245 | BACTRLTOXIN | 155 | 9e-49 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109250 | BACTRLTOXIN | 152 | 2e-49 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109255 | BACTRLTOXIN | 108 | 3e-32 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109260 | BACTRLTOXIN | 108 | 2e-30 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109265 | BACTRLTOXIN | 123 | 2e-36 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah109270 | BACTRLTOXIN | 170 | 1e-54 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| 44 | blahblah110115 | blahblah110150 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah110115 | -1 | 14 | 0.100138 | exotoxin | |
| blahblah110125 | -1 | 15 | 0.395144 | hypothetical protein | |
| blahblah110130 | 0 | 14 | 1.946307 | hypothetical protein | |
| blahblah110135 | 0 | 14 | 1.941668 | hypothetical protein | |
| blahblah110140 | 0 | 14 | 2.073656 | hypothetical protein | |
| blahblah110145 | 0 | 14 | 1.924305 | phage tail protein | |
| blahblah110150 | 3 | 15 | 2.229328 | phage tail tape measure protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110125 | BACTRLTOXIN | 275 | 1e-95 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110130 | DPTHRIATOXIN | 27 | 0.022 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110145 | GPOSANCHOR | 43 | 7e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110155 | TYPE4SSCAGA | 36 | 0.001 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 45 | blahblah110405 | blahblah110440 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah110405 | 1 | 13 | -2.692631 | gamma-hemolysin subunit B | |
| blahblah110410 | 1 | 12 | -3.257235 | succinyl-diaminopimelate desuccinylase | |
| blahblah110415 | 1 | 14 | -3.505105 | succinyl-diaminopimelate desuccinylase | |
| blahblah110420 | 3 | 16 | -3.273873 | potassium transporter KtrB | |
| blahblah110425 | 5 | 15 | -3.408325 | exotoxin | |
| blahblah110430 | 2 | 15 | -2.982827 | enterotoxin | |
| blahblah110435 | 0 | 17 | -2.397658 | hypothetical protein | |
| blahblah110440 | -1 | 17 | -2.088065 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110410 | BICOMPNTOXIN | 214 | 8e-70 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110415 | BICOMPNTOXIN | 165 | 2e-50 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110430 | BACTRLTOXIN | 118 | 1e-34 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110435 | BACTRLTOXIN | 396 | e-143 | Bacterial toxin signature. | |
>BACTRLTOXIN#Bacterial toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110445 | TOXICSSTOXIN | 358 | e-129 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| 46 | blahblah110550 | blahblah110585 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah110550 | 3 | 13 | -1.372165 | hypothetical protein | |
| blahblah110555 | -1 | 13 | -4.147437 | nitroreductase | |
| blahblah110560 | 0 | 11 | -4.130785 | hydrolase | |
| blahblah110565 | 0 | 13 | -4.971333 | delta-hemolysin | |
| blahblah110570 | 0 | 14 | -3.238244 | accessory gene regulator protein B | |
| blahblah110575 | 0 | 12 | -1.600425 | autoinducing peptide AgrD | |
| blahblah110580 | -1 | 12 | -1.478398 | histidine kinase | |
| blahblah110585 | 0 | 13 | -0.514541 | DNA-binding response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110550 | TONBPROTEIN | 46 | 7e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110570 | PF04647 | 130 | 2e-40 | Accessory gene regulator B | |
>PF04647#Accessory gene regulator B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110580 | FLGBIOSNFLIP | 29 | 0.024 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah110585 | HTHFIS | 34 | 5e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 47 | blahblah111390 | blahblah111425 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah111390 | -2 | 11 | -1.116296 | ABC transporter substrate-binding protein | |
| blahblah111400 | -3 | 8 | -1.537810 | hypothetical protein | |
| blahblah111405 | -2 | 9 | -1.409219 | alanine racemase | |
| blahblah111410 | -3 | 8 | -1.477238 | siderophore synthetase | |
| blahblah111415 | -3 | 8 | -1.203136 | MFS transporter | |
| blahblah111420 | -3 | 9 | -0.422663 | hypothetical protein | |
| blahblah111425 | -2 | 9 | -0.139259 | alkaline shock protein 23 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111400 | FERRIBNDNGPP | 96 | 5e-25 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111410 | ALARACEMASE | 39 | 1e-05 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111415 | PF04183 | 258 | 1e-80 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111420 | TCRTETA | 42 | 3e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111425 | PF04183 | 270 | 3e-84 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah111430 | TCRTETOQM | 29 | 0.012 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 48 | blahblah112300 | blahblah112315 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah112300 | -1 | 9 | -1.283507 | MFS transporter | |
| blahblah112305 | -2 | 12 | -1.794899 | multidrug efflux protein | |
| blahblah112310 | -2 | 13 | -2.372435 | TetR family transcriptional regulator | |
| blahblah112315 | -2 | 14 | -2.166288 | Bcr/CflA family drug resistance efflux |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112300 | TCRTETB | 158 | 2e-44 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112305 | RTXTOXIND | 59 | 1e-12 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112310 | HTHTETR | 45 | 4e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112315 | TCRTETA | 65 | 1e-13 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 49 | blahblah112660 | blahblah112690 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah112660 | 1 | 18 | -1.502714 | hypothetical protein | |
| blahblah112665 | 0 | 16 | -1.483995 | gamma-hemolysin component A | |
| blahblah112670 | -1 | 15 | -1.576223 | gamma-hemolysin component C | |
| blahblah112675 | -1 | 15 | -1.401706 | gamma-hemolysin component B | |
| blahblah112680 | -3 | 15 | -1.222983 | hypothetical protein | |
| blahblah112685 | -2 | 18 | -1.223994 | 6-carboxyhexanoate--CoA ligase | |
| blahblah112690 | -2 | 18 | -1.107743 | 8-amino-7-oxononanoate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112665 | PF05704 | 24 | 0.049 | Capsular polysaccharide synthesis protein | |
>PF05704#Capsular polysaccharide synthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112670 | BICOMPNTOXIN | 428 | e-154 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112675 | BICOMPNTOXIN | 469 | e-170 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112680 | BICOMPNTOXIN | 383 | e-136 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah112695 | CLENTEROTOXN | 28 | 0.047 | Clostridium enterotoxin signature. | |
>CLENTEROTOXN#Clostridium enterotoxin signature. | |||||
| 50 | blahblah113090 | blahblah113125 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah113090 | 6 | 21 | -2.984141 | hypothetical protein | |
| blahblah113095 | 4 | 16 | -1.677983 | hypothetical protein | |
| blahblah113100 | 5 | 13 | -1.611970 | transcriptional regulator | |
| blahblah113105 | 3 | 10 | -0.413247 | transcriptional regulator | |
| blahblah113110 | 3 | 11 | 1.053459 | UTP--glucose-1-phosphate uridylyltransferase | |
| blahblah113115 | 3 | 11 | 1.383029 | transposase | |
| blahblah113120 | 3 | 11 | 2.012322 | fibronectin-binding protein A | |
| blahblah113125 | 2 | 11 | 2.048440 | fibronectin-binding protein A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113100 | V8PROTEASE | 34 | 2e-04 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113105 | GPOSANCHOR | 30 | 0.014 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113130 | TONBPROTEIN | 51 | 6e-09 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113135 | PF03544 | 58 | 3e-11 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 51 | blahblah113515 | blahblah113550 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah113515 | -1 | 16 | 0.015859 | TetR family transcriptional regulator | |
| blahblah113520 | -2 | 17 | -0.326791 | hypothetical protein | |
| blahblah113525 | -3 | 13 | 0.561268 | hypothetical protein | |
| blahblah113530 | -2 | 8 | 0.674372 | glyoxalase | |
| blahblah113535 | -3 | 9 | 1.340542 | hypothetical protein | |
| blahblah113540 | -3 | 12 | 1.851605 | hypothetical protein | |
| blahblah113545 | -2 | 13 | 1.681440 | TetR family transcriptional regulator | |
| blahblah113550 | 0 | 14 | 2.188001 | short-chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113515 | HTHTETR | 43 | 1e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113530 | TRNSINTIMINR | 28 | 0.011 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113535 | NUCEPIMERASE | 36 | 2e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113545 | HTHTETR | 62 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113550 | DHBDHDRGNASE | 70 | 2e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 52 | blahblah113885 | blahblah113920 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah113885 | -1 | 14 | 2.236278 | clumping factor B | |
| blahblah113890 | -1 | 13 | 2.097674 | transcriptional regulator | |
| blahblah113895 | 0 | 14 | 2.188571 | carbamate kinase 2 | |
| blahblah113900 | -2 | 12 | 0.500050 | arginine-ornithine antiporter | |
| blahblah113905 | -2 | 11 | 0.742846 | ornithine carbamoyltransferase | |
| blahblah113910 | -3 | 10 | 0.650358 | arginine deiminase | |
| blahblah113915 | -3 | 9 | 0.009281 | ArgR family transcriptional regulator | |
| blahblah113920 | -4 | 10 | 0.123880 | aureolysin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113895 | PF05616 | 51 | 2e-08 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113905 | CARBMTKINASE | 388 | e-138 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113920 | ARGDEIMINASE | 506 | 0.0 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113930 | ARGREPRESSOR | 82 | 7e-23 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113935 | THERMOLYSIN | 440 | e-152 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| 53 | blahblah113950 | blahblah113980 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah113950 | -2 | 9 | 0.996573 | phage infection protein | |
| blahblah113955 | -2 | 8 | 1.198611 | N-acetylmuramoyl-L-alanine amidase | |
| blahblah113960 | -2 | 8 | 0.253149 | hypothetical protein | |
| blahblah113965 | -1 | 9 | 0.199783 | hypothetical protein | |
| blahblah113970 | 0 | 11 | -0.058808 | accessory Sec system glycosylation chaperone | |
| blahblah113975 | 1 | 16 | -0.000883 | accessory Sec system glycosyltransferase GtfA | |
| blahblah113980 | -1 | 14 | 0.321515 | accessory Sec system translocase SecA2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113965 | ABC2TRNSPORT | 39 | 6e-05 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113970 | FLGFLGJ | 64 | 5e-13 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113975 | ISCHRISMTASE | 77 | 3e-19 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah113995 | SECA | 656 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 54 | blahblah114000 | blahblah114070 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| blahblah114000 | 8 | 14 | 2.731807 | accessory Sec system protein translocase subunit | |
| blahblah114010 | 10 | 14 | 2.760962 | serine-rich adhesin for platelets | |
| blahblah114015 | 11 | 16 | 3.067065 | flavin reductase | |
| blahblah114020 | 13 | 16 | 4.016197 | hypothetical protein | |
| blahblah114025 | -1 | 15 | 1.287843 | hypothetical protein | |
| blahblah114030 | -2 | 14 | 0.087465 | hypothetical protein | |
| blahblah114035 | -2 | 15 | 0.157482 | hypothetical protein | |
| blahblah114045 | -2 | 15 | -0.308160 | methionine sulfoxide reductase A | |
| blahblah114050 | -1 | 16 | -1.456636 | GNAT family acetyltransferase | |
| blahblah114055 | -2 | 17 | -1.145286 | capsular polysaccharide biosynthesis protein | |
| blahblah114060 | -1 | 17 | -1.261005 | capsular polysaccharide biosynthesis protein | |
| blahblah114065 | -1 | 16 | -1.880570 | capsular polysaccharide biosynthesis protein | |
| blahblah114070 | -1 | 15 | -3.496218 | biofilm operon icaADBC HTH-type negative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah114015 | SECYTRNLCASE | 130 | 4e-36 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah114020 | ICENUCLEATIN | 55 | 3e-09 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah114040 | ENTEROTOXINA | 28 | 0.005 | Heat-labile enterotoxin A chain signature. | |
>ENTEROTOXINA#Heat-labile enterotoxin A chain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah114045 | NUCEPIMERASE | 27 | 0.043 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah114055 | SACTRNSFRASE | 45 | 1e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| blahblah114075 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||