:: PredictBias ::

A) Input parameters
Genome	Symbioflor.gbk	Threshold dinucleotide bias	2
Threshold codon bias	4	Threshold %GC bias	3
E-value (RPSBlast)	0.05	Genome (non-pathogenic)

B) Compare a potential GI or PAI in related non-pathogenic sp. (phylogenetic tree)
Potential GI or PAI start end
Select Organism

C) Potential GIs and PAIs in NC_019770 (download)

S.No

Start

End

Bias

Virulence

Insertion elements

Prediction

EFS1_RS00005

EFS1_RS00040

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS00005	2	14	1.169677	chromosomal replication initiator protein DnaA
EFS1_RS00010	3	15	1.153543	DNA polymerase III subunit beta
EFS1_RS00015	3	16	1.914427	S4 domain-containing protein YaaA
EFS1_RS00020	4	18	1.845769	DNA replication and repair protein RecF
EFS1_RS00025	5	15	1.700117	DNA topoisomerase (ATP-hydrolyzing) subunit B
EFS1_RS00030	4	16	1.059450	DNA gyrase subunit A
EFS1_RS00035	3	12	0.370608	30S ribosomal protein S6
EFS1_RS00040	2	13	0.373323	single-stranded DNA-binding protein

EFS1_RS00370

EFS1_RS14075

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS00370	2	20	-0.455484	DUF2273 domain-containing protein
EFS1_RS00375	-1	17	-1.617756	Asp23/Gls24 family envelope stress response
EFS1_RS00380	-1	13	-2.920815	Asp23/Gls24 family envelope stress response
EFS1_RS00385	0	13	-3.019524	GlsB/YeaQ/YmgE family stress response membrane
EFS1_RS00390	-1	10	0.336137	MFS transporter
EFS1_RS00395	-1	9	0.575251	hypothetical protein
EFS1_RS00400	-1	9	0.127824	M protein trans-acting positive regulator (MGA)
EFS1_RS00405	-2	9	0.461167	hypothetical protein
EFS1_RS14065	-1	11	1.233379	hypothetical protein
EFS1_RS00410	0	12	1.790849	peptidase
EFS1_RS00415	1	14	0.401075	diacylglycerol kinase
EFS1_RS00420	2	14	0.428317	hypothetical protein
EFS1_RS14070	4	17	1.229387	hypothetical protein
EFS1_RS00430	2	15	0.623709	LPXTG-motif containing, cell wall anchor domain
EFS1_RS00435	0	14	-0.500120	formate/nitrite transporter
EFS1_RS00440	1	12	-0.049518	hypothetical protein
EFS1_RS14075	2	12	-0.330150	IS30 family transposase

EFS1_RS01735

EFS1_RS01780

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS01735	1	16	-3.079711	AraC family transcriptional regulator
EFS1_RS01740	0	17	-1.260831	hypothetical protein
EFS1_RS01745	1	18	0.234137	peptide MFS transporter
EFS1_RS01750	0	17	1.056895	hypothetical protein
EFS1_RS01755	1	15	1.655593	peptidase M23
EFS1_RS14130	2	11	3.062560	PaaI family thioesterase
EFS1_RS01760	1	10	3.656629	1,4-dihydroxy-2-naphthoyl-CoA synthase
EFS1_RS01765	1	12	4.047568	o-succinylbenzoate--CoA ligase
EFS1_RS01775	1	13	3.589680	isochorismate synthase
EFS1_RS01780	0	11	3.025359	2-succinyl-5-enolpyruvyl-6-hydroxy-3-

EFS1_RS01855

EFS1_RS02475

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS01855	2	13	0.400567	DUF1189 domain-containing protein
EFS1_RS01860	2	13	-0.130773	superoxide dismutase
EFS1_RS01865	0	11	-1.159999	diaminopimelate epimerase
EFS1_RS01870	0	9	-1.885608	LytR family transcriptional regulator
EFS1_RS01875	-2	12	-2.814699	glucosamine-6-phosphate deaminase
EFS1_RS01880	-1	10	-2.853535	magnesium transporter MgtC
EFS1_RS01885	-1	12	-3.075551	LemA family protein
EFS1_RS01890	0	12	-2.169930	hypothetical protein
EFS1_RS01895	-2	11	-0.097091	class 1b ribonucleoside-diphosphate reductase
EFS1_RS01900	-3	11	0.273601	class 1b ribonucleoside-diphosphate reductase
EFS1_RS01905	-2	15	-0.566799	class Ib ribonucleoside-diphosphate reductase
EFS1_RS01910	-2	16	-1.311400	NrdH-redoxin
EFS1_RS01915	-1	18	-1.961902	ferrous iron transport protein A
EFS1_RS01920	0	19	-2.760050	ferrous iron transport protein B
EFS1_RS01925	7	30	-8.905224	hypothetical protein
EFS1_RS01930	6	28	-8.796878	site-specific integrase
EFS1_RS01935	6	31	-8.822416	DNA-binding protein
EFS1_RS01945	7	30	-4.633500	*hypothetical protein
EFS1_RS14140	4	24	-3.219936	helix-turn-helix domain-containing protein
EFS1_RS01950	4	22	-3.638263	sigma-70 family RNA polymerase sigma factor
EFS1_RS01955	3	22	-3.007556	hypothetical protein
EFS1_RS14145	3	21	-3.510569	IS3 family transposase
EFS1_RS01965	2	21	-3.531605	zeta toxin
EFS1_RS01975	0	21	-4.644990	antitoxin
EFS1_RS01980	-1	20	-4.658272	peptide-binding protein
EFS1_RS01985	0	21	-3.681308	chromosome partitioning protein ParA
EFS1_RS14150	3	21	-3.549298	PTS sugar transporter subunit IIC
EFS1_RS14155	3	20	-2.618795	hypothetical protein
EFS1_RS01995	1	19	-2.904956	GntR family transcriptional regulator
EFS1_RS02000	2	20	-2.627978	IS30 family transposase
EFS1_RS02005	3	21	-2.666079	IS6 family transposase
EFS1_RS02010	3	25	-1.109428	hypothetical protein
EFS1_RS02015	2	19	-2.992797	putative holin-like toxin
EFS1_RS02020	3	17	-4.231608	hypothetical protein
EFS1_RS02025	3	17	-4.193020	elongation factor GreAB
EFS1_RS14160	3	17	-3.254462	plasmid mobilization relaxosome protein MobC
EFS1_RS02035	3	17	-3.740148	hypothetical protein
EFS1_RS02045	2	19	-1.446937	DNA primase
EFS1_RS02050	3	19	-1.612855	hypothetical protein
EFS1_RS02055	3	22	-1.902195	hypothetical protein
EFS1_RS02060	2	22	-2.041700	conjugal transfer protein TraG
EFS1_RS02065	2	19	-0.989048	PcfB family protein
EFS1_RS02070	1	17	-1.383154	hypothetical protein
EFS1_RS02080	-1	16	-1.314900	hypothetical protein
EFS1_RS02085	-1	16	-1.206441	hypothetical protein
EFS1_RS02090	0	16	-0.844690	CHAP domain-containing protein
EFS1_RS02095	0	18	-1.680538	TraC-F-type conjugal transfer protein
EFS1_RS02100	3	21	-3.090921	PrgI family protein
EFS1_RS02105	4	21	-1.179980	hypothetical protein
EFS1_RS02110	7	22	-1.415220	hypothetical protein
EFS1_RS02115	3	14	-0.322331	hypothetical protein
EFS1_RS02120	3	15	-0.416328	hypothetical protein
EFS1_RS02125	1	16	0.268088	cell wall surface anchor protein
EFS1_RS02130	-1	15	1.019941	PrgU
EFS1_RS02135	-1	17	1.034777	aggregation substance
EFS1_RS02140	-1	16	-0.192878	IS3 family transposase
EFS1_RS02150	1	26	-1.125024	PTS sugar transporter subunit IIC
EFS1_RS02155	1	23	-1.271559	2-dehydropantoate 2-reductase
EFS1_RS02160	1	20	-0.703928	recombinase
EFS1_RS02165	2	23	1.846214	hypothetical protein
EFS1_RS02170	3	23	1.230773	IS30 family transposase
EFS1_RS02180	2	22	4.185750	MFS transporter
EFS1_RS02190	1	24	3.193913	hypothetical protein
EFS1_RS02195	0	21	1.809484	IS6 family transposase
EFS1_RS02205	0	22	-0.475896	D-lactate dehydrogenase
EFS1_RS02210	0	22	-0.422880	IS3 family transposase
EFS1_RS02215	1	21	-0.871726	dihydrolipoamide dehydrogenase
EFS1_RS14165	3	24	-1.656655	cysteine hydrolase
EFS1_RS02230	1	22	0.013692	hypothetical protein
EFS1_RS02235	0	26	0.907292	TetR/AcrR family transcriptional regulator
EFS1_RS02240	2	28	0.430209	hypothetical protein
EFS1_RS02245	4	27	2.634259	ISL3 family transposase
EFS1_RS14170	5	32	4.634802	transposase
EFS1_RS02250	5	35	5.102840	hypothetical protein
EFS1_RS14175	5	33	4.658069	lysophospholipase
EFS1_RS02260	3	24	3.242932	IS256 family transposase
EFS1_RS02265	1	25	3.343066	hypothetical protein
EFS1_RS14180	1	24	1.758553	XRE family transcriptional regulator
EFS1_RS02270	1	23	1.507942	ATP-dependent Clp protease ATP-binding subunit
EFS1_RS02280	1	22	1.281445	SOS response-associated peptidase
EFS1_RS02285	2	27	-0.088123	IS30 family transposase
EFS1_RS02290	2	21	-2.554214	hypothetical protein
EFS1_RS02295	3	21	-2.302100	ParA family protein
EFS1_RS02300	3	20	-2.983241	type IA DNA topoisomerase
EFS1_RS02305	3	21	-3.502789	IS3 family transposase
EFS1_RS02310	2	19	-3.756412	chromosome partitioning protein ParA
EFS1_RS02315	2	20	-3.255829	peptide-binding protein
EFS1_RS02320	4	21	-3.807703	zeta toxin
EFS1_RS02330	3	24	-4.749597	hypothetical protein
EFS1_RS02335	4	25	-3.824074	HAD family hydrolase
EFS1_RS02340	4	26	-5.259752	DeoR/GlpR transcriptional regulator
EFS1_RS02345	4	27	-4.011040	hypothetical protein
EFS1_RS02350	7	27	-2.602366	galactose-6-phosphate isomerase subunit LacA
EFS1_RS02355	8	30	-1.851830	galactose-6-phosphate isomerase subunit LacB
EFS1_RS14190	10	32	-0.903037	tagatose-6-phosphate kinase
EFS1_RS02360	9	36	1.157615	tagatose-bisphosphate aldolase
EFS1_RS02370	8	34	0.936003	PTS lactose/cellobiose transporter subunit IIA
EFS1_RS02380	6	30	0.772924	PTS lactose transporter subunit IIBC
EFS1_RS02385	5	28	0.428945	6-phospho-beta-galactosidase
EFS1_RS02390	6	23	-1.091658	DUF3884 domain-containing protein
EFS1_RS02395	5	24	-3.533403	protein lacX
EFS1_RS02400	5	23	-4.133684	zeta toxin
EFS1_RS02405	4	22	-4.337073	resolvase
EFS1_RS02410	4	24	-4.809925	resolvase
EFS1_RS02415	4	24	-4.960343	choloylglycine hydrolase
EFS1_RS14195	3	26	-4.283268	IS30 family transposase
EFS1_RS02440	3	28	0.505589	PTS sugar transporter subunit IIB
EFS1_RS02445	4	31	1.775666	PTS ascorbate transporter subunit IIB
EFS1_RS02450	4	34	5.547837	MATE family efflux transporter
EFS1_RS14200	4	34	6.068591	phosphoglycerate mutase
EFS1_RS02460	6	33	6.725279	ACT domain-containing protein
EFS1_RS02465	5	31	6.661637	PFL family protein
EFS1_RS02470	4	29	4.619597	hypothetical protein
EFS1_RS02475	3	23	3.936539	hypothetical protein

EFS1_RS04040

EFS1_RS04085

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS04040	2	17	0.349074	hypothetical protein
EFS1_RS04045	2	14	-0.290577	phosphatase
EFS1_RS04050	1	13	-1.473273	pyrroline-5-carboxylate reductase
EFS1_RS04055	0	17	-3.531909	AraC family transcriptional regulator
EFS1_RS04060	2	21	-5.869662	hypothetical protein
EFS1_RS04065	4	20	-5.992411	nucleotide pyrophosphohydrolase
EFS1_RS04070	3	25	-6.416850	VOC family protein
EFS1_RS04075	2	20	-3.747854	hypothetical protein
EFS1_RS04080	2	20	-2.969315	hypothetical protein
EFS1_RS04085	2	20	-3.130920	hypothetical protein

EFS1_RS04515

EFS1_RS04545

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS04515	3	30	0.564367	ATP-dependent 6-phosphofructokinase
EFS1_RS04520	3	24	-0.915365	pyruvate kinase
EFS1_RS04525	3	16	-1.636850	hypothetical protein
EFS1_RS04530	2	17	-2.072180	50S ribosomal protein L32
EFS1_RS04535	2	15	-2.517162	phosphogluconate dehydrogenase
EFS1_RS04540	-1	13	-2.958226	DNA-binding response regulator
EFS1_RS04545	1	14	-3.250908	sensor histidine kinase

EFS1_RS04830

EFS1_RS04870

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS04830	1	19	-3.388122	class C sortase
EFS1_RS04835	4	22	-4.008108	hypothetical protein
EFS1_RS04840	0	20	-3.111355	hypothetical protein
EFS1_RS04845	-1	18	-4.256270	DUF378 domain-containing protein
EFS1_RS04850	-2	18	-3.719191	hypothetical protein
EFS1_RS04855	-1	17	-4.033474	hypothetical protein
EFS1_RS04860	-1	13	-3.123045	DUF898 domain-containing protein
EFS1_RS04865	-1	13	-3.260996	LPXTG-motif cell wall anchor domain protein
EFS1_RS04870	0	12	-3.555125	ABC transporter ATP-binding protein

EFS1_RS05980

EFS1_RS06025

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS05980	5	22	-2.430921	heme biosynthesis protein HemY
EFS1_RS14325	8	28	-4.615456	hypothetical protein
EFS1_RS05990	9	29	-5.044952	ABC transporter ATP-binding protein
EFS1_RS05995	7	28	-5.927182	IS982 family transposase
EFS1_RS06000	7	28	-6.983035	ABC transporter permease
EFS1_RS06005	7	26	-7.259306	ABC transporter ATP-binding protein
EFS1_RS06010	6	26	-7.751119	accessory gene regulator AgrC
EFS1_RS06015	2	21	-6.369552	GHKL domain-containing protein
EFS1_RS06025	0	18	-4.642337	DNA-binding response regulator

EFS1_RS06330

EFS1_RS06355

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS06330	3	15	0.785600	molybdenum cofactor biosynthesis protein
EFS1_RS06335	3	17	0.874232	molybdenum cofactor biosynthesis protein MoaB
EFS1_RS06340	2	17	0.697446	molybdate ABC transporter substrate-binding
EFS1_RS06345	2	11	0.087871	molybdate ABC transporter permease subunit
EFS1_RS06350	2	12	-0.296134	molybdenum ABC transporter ATP-binding protein
EFS1_RS06355	2	12	-0.684420	heavy metal translocating P-type ATPase

EFS1_RS07690

EFS1_RS08010

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS07690	2	17	-0.237947	hypothetical protein
EFS1_RS07695	1	18	-0.958776	endonuclease
EFS1_RS07700	-2	17	0.421406	hypothetical protein
EFS1_RS07705	-1	21	0.134259	hypothetical protein
EFS1_RS07710	0	21	-0.953565	hypothetical protein
EFS1_RS14355	1	19	-2.090477	hypothetical protein
EFS1_RS07715	2	17	-2.959392	*hypothetical protein
EFS1_RS07725	2	17	-2.803536	hypothetical protein
EFS1_RS07730	2	17	-2.949343	holin
EFS1_RS07735	2	16	-2.748067	DUF2479 domain-containing protein
EFS1_RS07740	2	16	-2.568860	phage minor structural protein
EFS1_RS07745	2	16	-2.045924	phage tail protein
EFS1_RS07750	1	15	-0.760070	phage tail tape measure protein
EFS1_RS07755	1	14	-0.636350	hypothetical protein
EFS1_RS07760	2	19	0.822541	hypothetical protein
EFS1_RS07765	1	22	0.945799	hypothetical protein
EFS1_RS07770	2	18	0.786795	hypothetical protein
EFS1_RS07775	1	14	-0.645883	hypothetical protein
EFS1_RS07780	2	13	-1.411509	phage capsid protein
EFS1_RS07785	3	14	-1.215834	hypothetical protein
EFS1_RS07790	4	15	-1.225240	hypothetical protein
EFS1_RS07795	4	17	-2.234162	hypothetical protein
EFS1_RS07800	2	17	-2.095458	hypothetical protein
EFS1_RS07805	3	18	-1.640525	hypothetical protein
EFS1_RS07810	3	18	-1.608475	phage capsid protein
EFS1_RS07815	2	18	-1.790570	poly(3-hydroxybutyrate) depolymerase
EFS1_RS07820	3	19	-2.082440	PBSX family phage terminase large subunit
EFS1_RS07825	2	18	-1.013613	hypothetical protein
EFS1_RS07830	4	22	-0.865741	hypothetical protein
EFS1_RS07835	6	25	-2.448438	*hypothetical protein
EFS1_RS07845	6	21	-2.904956	autolysin
EFS1_RS07850	7	21	-2.674276	hypothetical protein
EFS1_RS14360	4	23	-3.437169	hypothetical protein
EFS1_RS07855	5	24	-2.973951	hypothetical protein
EFS1_RS07860	4	25	-2.466508	hypothetical protein
EFS1_RS07870	3	26	-3.543427	hypothetical protein
EFS1_RS07875	2	26	-3.360914	site-specific integrase
EFS1_RS07880	0	25	-3.065413	SAM-dependent DNA methyltransferase
EFS1_RS07885	0	24	-2.714252	hypothetical protein
EFS1_RS07890	1	22	-2.747471	hypothetical protein
EFS1_RS07895	0	21	-3.698198	hypothetical protein
EFS1_RS07900	1	21	-2.685829	hypothetical protein
EFS1_RS07905	1	20	-2.582972	hypothetical protein
EFS1_RS07910	2	20	-3.016824	hypothetical protein
EFS1_RS07915	3	22	-3.232297	DUF1351 domain-containing protein
EFS1_RS07920	3	22	-3.878086	single-stranded DNA-binding protein
EFS1_RS07930	4	22	-3.019150	hypothetical protein
EFS1_RS07935	3	23	-2.990363	hypothetical protein
EFS1_RS07940	3	25	-3.150054	hypothetical protein
EFS1_RS07945	3	24	-3.248179	hypothetical protein
EFS1_RS07950	3	20	-2.816118	phage regulatory protein
EFS1_RS07955	2	20	-2.640068	hypothetical protein
EFS1_RS07960	4	27	-3.958025	hypothetical protein
EFS1_RS07965	3	27	-4.738352	hypothetical protein
EFS1_RS07970	1	26	-4.743529	hypothetical protein
EFS1_RS07975	0	18	-3.450756	hypothetical protein
EFS1_RS07980	-1	15	-2.005335	XRE family transcriptional regulator
EFS1_RS07985	-1	14	-2.817426	DUF4352 domain-containing protein
EFS1_RS07990	-1	13	-3.340262	site-specific integrase
EFS1_RS07995	-1	12	-3.041179	Tyrosine--tRNA ligase 2
EFS1_RS08000	-2	12	-2.043196	ABC transporter permease
EFS1_RS08005	-1	14	-2.187471	ABC transporter ATP-binding protein
EFS1_RS08010	1	18	-3.503952	catabolite control protein A

EFS1_RS08165

EFS1_RS08195

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS08165	-1	14	3.584964	3-oxoacyl-ACP reductase
EFS1_RS08170	0	13	3.924613	QueT transporter family protein
EFS1_RS08175	-1	15	3.235269	hypothetical protein
EFS1_RS08180	0	14	3.028032	DUF1648 domain-containing protein
EFS1_RS08185	0	14	3.293221	phosphoribosylamine--glycine ligase
EFS1_RS08190	0	11	3.687953	bifunctional
EFS1_RS08195	0	12	3.273794	phosphoribosylglycinamide formyltransferase

EFS1_RS08330

EFS1_RS08365

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS08330	2	15	-0.945812	tagatose-6-phosphate ketose
EFS1_RS08335	2	16	-0.353574	GntR family transcriptional regulator
EFS1_RS08340	2	17	-0.366037	glycosyltransferase family 8 protein
EFS1_RS08345	3	18	-0.455769	glycosyltransferase family 8 protein
EFS1_RS08350	4	20	0.001400	PTS fructose transporter subunit IIA
EFS1_RS14370	2	18	0.436905	hypothetical protein
EFS1_RS08365	2	13	0.516105	peptidase

EFS1_RS08530

EFS1_RS08585

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS08530	4	22	-1.571373	hypothetical protein
EFS1_RS08535	0	15	-0.724906	hypothetical protein
EFS1_RS08540	-1	13	-0.814690	hypothetical protein
EFS1_RS14385	-1	10	-0.725757	N-acetyltransferase
EFS1_RS08545	-2	10	-0.050926	cation-translocating P-type ATPase
EFS1_RS08550	-2	10	0.201056	membrane protein
EFS1_RS08555	-1	10	-0.737732	transcriptional regulator YeiL
EFS1_RS08560	3	16	-2.134518	DUF3224 domain-containing protein
EFS1_RS08565	3	15	-2.164910	Bcr/CflA family drug resistance efflux
EFS1_RS08570	3	15	-1.760922	membrane protein
EFS1_RS08575	2	15	-2.297606	hypothetical protein
EFS1_RS08580	0	15	-2.889191	hypothetical protein
EFS1_RS08585	2	17	-0.966019	hypothetical protein

EFS1_RS08625

EFS1_RS14395

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS08625	-1	13	-3.507534	hypothetical protein
EFS1_RS08630	-1	14	-3.814922	deoxyguanosinetriphosphate triphosphohydrolase
EFS1_RS08635	2	13	-2.546114	TIR domain-containing protein
EFS1_RS08640	2	26	-1.794142	hypothetical protein
EFS1_RS08645	1	30	-1.294950	enolase
EFS1_RS08650	3	45	0.076064	triose-phosphate isomerase
EFS1_RS14395	2	44	1.038183	phosphoglycerate kinase

EFS1_RS09070

EFS1_RS09115

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS09070	1	15	-3.449671	glycerophosphodiester phosphodiesterase
EFS1_RS09075	3	18	-5.707982	glycosyltransferase
EFS1_RS09080	5	21	-7.934945	epimerase
EFS1_RS09085	6	23	-8.923463	polymerase
EFS1_RS09090	6	23	-8.640126	glycosyl transferase
EFS1_RS09095	7	25	-9.208464	hypothetical protein
EFS1_RS09100	5	22	-6.283893	glycosyltransferase family 2 protein
EFS1_RS09105	3	20	-5.258889	dTDP-glucose 4,6-dehydratase
EFS1_RS09110	2	17	-4.093844	2-C-methyl-D-erythritol 4-phosphate
EFS1_RS09115	1	13	-3.449185	hypothetical protein

EFS1_RS09260

EFS1_RS09580

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS09260	4	17	-3.461411	DUF4950 domain-containing protein
EFS1_RS09265	2	15	-2.960056	IS256 family transposase
EFS1_RS09270	2	15	-2.853357	membrane protein
EFS1_RS09275	5	17	-4.146907	peptidase M23
EFS1_RS09280	3	21	-2.565546	hypothetical protein
EFS1_RS09285	3	17	-2.046674	1,4-beta-N-acetylmuramidase
EFS1_RS09290	3	18	-1.569896	holin
EFS1_RS09295	2	18	-1.520711	hypothetical protein
EFS1_RS09300	2	19	-1.704420	hypothetical protein
EFS1_RS09305	2	18	-1.680224	phage protein
EFS1_RS09310	2	20	-1.308748	tail protein
EFS1_RS09315	2	19	-1.465741	phage tail tape measure protein
EFS1_RS09320	2	21	-1.385887	hypothetical protein
EFS1_RS09325	5	25	-2.111939	hypothetical protein
EFS1_RS09330	6	24	-1.839058	hypothetical protein
EFS1_RS09335	5	22	-2.057879	phage major tail protein, TP901-1 family
EFS1_RS09340	3	24	-2.470728	hypothetical protein
EFS1_RS09345	1	25	-2.612522	hypothetical protein
EFS1_RS09350	0	25	-2.109835	hypothetical protein
EFS1_RS09355	1	25	-2.455693	hypothetical protein
EFS1_RS09360	0	23	-2.747685	minor capsid protein E
EFS1_RS09365	3	23	-3.058512	hypothetical protein
EFS1_RS09370	6	24	-4.425212	DUF4355 domain-containing protein
EFS1_RS09375	5	23	-3.711673	hypothetical protein
EFS1_RS09380	5	23	-3.800718	hypothetical protein
EFS1_RS09385	6	24	-4.298507	phage head morphogenesis protein
EFS1_RS09390	6	25	-4.155441	phage portal protein
EFS1_RS09395	5	25	-4.005988	hypothetical protein
EFS1_RS09400	6	26	-3.462935	small subunit of terminase
EFS1_RS09405	8	31	-4.951799	hypothetical protein
EFS1_RS09410	7	30	-5.187491	hypothetical protein
EFS1_RS09415	7	28	-4.426566	hypothetical protein
EFS1_RS09420	7	28	-3.991997	transcriptional regulator
EFS1_RS09425	7	28	-4.008292	hypothetical protein
EFS1_RS09430	9	28	-3.490495	*autolysin
EFS1_RS09440	2	23	-2.178601	hypothetical protein
EFS1_RS09445	-1	21	-2.411403	hypothetical protein
EFS1_RS09450	2	22	-2.453777	hypothetical protein
EFS1_RS09455	2	23	-3.276277	hypothetical protein
EFS1_RS09460	2	23	-3.455019	hypothetical protein
EFS1_RS09465	2	23	-3.519739	RNA-binding protein
EFS1_RS09470	2	25	-3.423246	hypothetical protein
EFS1_RS09480	2	24	-4.179870	hypothetical protein
EFS1_RS09485	0	22	-4.237994	class I SAM-dependent methyltransferase
EFS1_RS09490	2	22	-3.890774	hypothetical protein
EFS1_RS09495	2	20	-3.568335	hypothetical protein
EFS1_RS09500	3	20	-3.820184	hypothetical protein
EFS1_RS09505	4	20	-4.036553	hypothetical protein
EFS1_RS09510	5	23	-3.983906	DUF1351 domain-containing protein
EFS1_RS09515	7	23	-4.033448	single-stranded DNA-binding protein
EFS1_RS09520	2	24	-3.583689	hypothetical protein
EFS1_RS09525	3	28	-4.693327	hypothetical protein
EFS1_RS09530	2	28	-4.962080	hypothetical protein
EFS1_RS09535	3	25	-5.109050	hypothetical protein
EFS1_RS09545	2	24	-6.080460	oxidoreductase
EFS1_RS09550	4	27	-6.487158	DUF739 domain-containing protein
EFS1_RS09555	5	25	-7.059833	transcriptional regulator
EFS1_RS09560	2	22	-5.579211	hypothetical protein
EFS1_RS09565	2	19	-5.334491	hypothetical protein
EFS1_RS09570	1	16	-3.776416	hypothetical protein
EFS1_RS09575	-1	15	-3.811630	hypothetical protein
EFS1_RS09580	-1	11	-3.047972	site-specific integrase

EFS1_RS11050

EFS1_RS11100

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS11050	2	10	-0.321948	hypothetical protein
EFS1_RS11055	1	11	-0.319474	hypothetical protein
EFS1_RS11060	1	12	-0.398070	Snf2 family helicase
EFS1_RS11065	1	12	0.122174	SMC family ATPase
EFS1_RS11070	2	12	0.437290	exonuclease sbcCD subunit D
EFS1_RS11075	3	15	1.066688	1-acyl-sn-glycerol-3-phosphate acyltransferase
EFS1_RS11080	2	15	1.129910	tRNA1(Val) (adenine(37)-N6)-methyltransferase
EFS1_RS11085	4	14	0.481036	hypothetical protein
EFS1_RS11090	2	13	-0.517915	5'-methylthioadenosine/adenosylhomocysteine
EFS1_RS11095	2	11	-0.758849	hypothetical protein
EFS1_RS11100	2	12	-1.035260	NUDIX hydrolase

EFS1_RS11405

EFS1_RS11500

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS11405	2	12	-0.231313	DNA polymerase III subunit delta'
EFS1_RS11410	1	13	0.593768	hypothetical protein
EFS1_RS11415	0	14	1.034259	thymidylate kinase
EFS1_RS11420	2	16	1.364093	hypothetical protein
EFS1_RS11425	2	19	1.482261	recombination protein RecR
EFS1_RS11430	1	16	1.039516	thiaminase II
EFS1_RS11435	2	15	0.701511	cobalt ABC transporter permease
EFS1_RS11440	2	15	0.260918	ABC transporter ATP-binding protein
EFS1_RS11445	2	12	0.359091	cobalt ABC transporter permease
EFS1_RS11455	3	11	0.661792	membrane protein
EFS1_RS14485	1	12	1.861690	MFS transporter
EFS1_RS11460	0	16	2.897875	MFS transporter
EFS1_RS11465	0	18	3.622872	transcriptional regulator
EFS1_RS11470	0	20	4.449249	bifunctional hydroxymethylpyrimidine
EFS1_RS11475	0	16	4.024511	thiamine phosphate synthase
EFS1_RS11480	0	15	4.040835	hydroxyethylthiazole kinase
EFS1_RS11485	0	13	3.600713	energy coupling factor transporter S component
EFS1_RS11490	0	11	2.880597	nucleoid-associated protein, YbaB/EbfC family
EFS1_RS11495	0	11	2.970851	DNA polymerase III subunit gamma/tau
EFS1_RS11500	0	12	3.005288	galactose-1-phosphate uridylyltransferase

EFS1_RS14505

EFS1_RS12210

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS14505	2	18	-3.163863	DNA repair protein
EFS1_RS11965	1	18	-3.052269	hypothetical protein
EFS1_RS11975	2	18	-3.307216	*hypothetical protein
EFS1_RS11980	2	17	-1.242552	hypothetical protein
EFS1_RS11985	3	15	-0.473849	endolysin
EFS1_RS11990	0	20	-0.742628	holin
EFS1_RS11995	2	19	-1.053105	holin
EFS1_RS12000	3	20	-1.197479	XkdX family protein
EFS1_RS12005	2	20	-0.765289	hypothetical protein
EFS1_RS12010	2	18	-1.307996	hypothetical protein
EFS1_RS12015	0	17	-0.969993	hypothetical protein
EFS1_RS12020	0	16	-1.069295	hypothetical protein
EFS1_RS12025	0	15	-0.998765	DUF2479 domain-containing protein
EFS1_RS12030	1	15	-1.040377	minor structural protein (phage-associated)
EFS1_RS12035	0	15	-1.372291	hypothetical protein
EFS1_RS12040	0	14	-0.780884	phage tail tape measure protein
EFS1_RS12045	1	14	-2.257045	hypothetical protein
EFS1_RS12050	-1	21	-3.025620	tail protein
EFS1_RS12055	2	23	-2.643518	hypothetical protein
EFS1_RS12060	1	21	-3.184454	hypothetical protein
EFS1_RS12065	0	17	-3.190882	hypothetical protein
EFS1_RS12070	0	18	-3.281829	phage gp6-like head-tail connector protein
EFS1_RS12075	0	18	-2.889525	phage major capsid protein
EFS1_RS12080	1	16	-2.219238	HK97 family phage prohead protease
EFS1_RS12085	1	17	-2.395809	phage portal protein
EFS1_RS12090	3	18	-2.067140	terminase large subunit
EFS1_RS12095	7	27	-1.448530	hypothetical protein
EFS1_RS12100	7	27	-0.947612	HNH endonuclease
EFS1_RS12105	4	24	-2.537698	hypothetical protein
EFS1_RS12115	3	25	-2.998405	*transcriptional regulator, ArpU family
EFS1_RS12120	3	24	-3.148081	hypothetical protein
EFS1_RS12125	2	25	-2.654574	site-specific integrase
EFS1_RS12130	1	23	-2.360759	SAM-dependent DNA methyltransferase
EFS1_RS12135	0	20	-2.892056	hypothetical protein
EFS1_RS12140	2	19	-2.005753	hypothetical protein
EFS1_RS12145	3	18	-1.710765	hypothetical protein
EFS1_RS12150	3	18	-1.692745	DUF1064 domain-containing protein
EFS1_RS12155	4	17	-1.999613	DNA replication protein DnaC
EFS1_RS12160	4	17	-2.394658	GntR family transcriptional regulator
EFS1_RS12165	5	18	-2.745178	DNA recombination protein RecT
EFS1_RS12170	4	20	-2.459324	hypothetical protein
EFS1_RS12175	6	26	-3.209426	hypothetical protein
EFS1_RS12180	6	24	-4.328106	hypothetical protein
EFS1_RS12185	6	21	-5.144447	hypothetical protein
EFS1_RS12190	5	20	-6.666152	hypothetical protein
EFS1_RS12195	3	22	-6.903737	XRE family transcriptional regulator
EFS1_RS12200	2	18	-5.542872	XRE family transcriptional regulator
EFS1_RS12205	1	15	-4.704840	ImmA/IrrE family metallo-endopeptidase
EFS1_RS12210	-1	11	-3.509521	hypothetical protein

EFS1_RS12795

EFS1_RS12870

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS12795	2	21	0.446417	rod shape-determining protein MreD
EFS1_RS12800	4	22	-0.231276	rod shape-determining protein MreC
EFS1_RS12805	1	20	0.768641	hypothetical protein
EFS1_RS12810	1	18	0.911751	polyribonucleotide nucleotidyltransferase
EFS1_RS12815	0	19	1.403549	30S ribosomal protein S15
EFS1_RS12820	0	18	1.409728	peptide deformylase
EFS1_RS12825	-1	15	1.334487	Cof-type HAD-IIB family hydrolase
EFS1_RS12830	1	15	1.589558	DNA-7-methylguanine glycosylase
EFS1_RS12835	2	18	1.604667	formate/nitrite transporter
EFS1_RS12840	4	13	2.415365	30S ribosomal protein S4
EFS1_RS12845	4	15	2.900665	hypothetical protein
EFS1_RS12850	4	16	3.151137	biotin transporter BioY
EFS1_RS12855	4	15	3.062022	signal peptidase I
EFS1_RS12860	4	16	3.082353	WxL domain-containing protein
EFS1_RS12865	3	15	2.933956	WxL domain-containing protein
EFS1_RS12870	1	16	3.135367	cell wall surface anchor protein

EFS1_RS12945

EFS1_RS13095

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS12945	2	13	1.904677	cupin
EFS1_RS12950	2	14	2.011481	signal recognition particle-docking protein
EFS1_RS12955	3	14	2.060296	Cof-type HAD-IIB family hydrolase
EFS1_RS12960	1	13	1.812960	chromosome segregation protein SMC
EFS1_RS12965	0	14	1.434070	ribonuclease 3
EFS1_RS12970	-1	14	1.489981	hypothetical protein
EFS1_RS12975	0	13	0.350686	oligopeptide ABC transporter substrate-binding
EFS1_RS14530	2	13	0.605331	ABC transporter permease
EFS1_RS12980	2	10	-0.047379	ABC transporter permease
EFS1_RS12985	3	13	-0.580026	ABC transporter ATP-binding protein
EFS1_RS12990	2	11	0.272985	ABC transporter ATP-binding protein
EFS1_RS12995	1	11	1.497308	IS30 family transposase
EFS1_RS13000	0	10	2.066668	acyl carrier protein
EFS1_RS13005	-1	11	2.030262	phosphate acetyltransferase PlsX
EFS1_RS13010	-1	13	2.025126	DNA helicase RecG
EFS1_RS13015	-2	11	0.580789	hypothetical protein
EFS1_RS13020	0	11	-0.459446	Asp23/Gls24 family envelope stress response
EFS1_RS13025	2	14	-2.766257	DNA-binding response regulator
EFS1_RS13030	3	18	-4.884177	GHKL domain-containing protein
EFS1_RS13035	4	19	-5.056217	IS30 family transposase
EFS1_RS13040	3	17	-3.855640	ABC transporter permease
EFS1_RS13045	0	13	-1.928404	sodium ABC transporter ATP-binding protein
EFS1_RS13050	-1	11	-0.892231	50S ribosomal protein L28
EFS1_RS13055	0	11	1.852321	thiamine diphosphokinase
EFS1_RS13060	0	13	3.188712	ribulose-phosphate 3-epimerase
EFS1_RS13065	-2	13	3.236111	ribosome small subunit-dependent GTPase A
EFS1_RS13070	-2	14	3.161410	serine/threonine protein kinase
EFS1_RS13075	-1	15	3.036949	serine/threonine-protein phosphatase
EFS1_RS13080	-1	14	3.286766	16S rRNA (cytosine(967)-C(5))-methyltransferase
EFS1_RS13085	0	14	2.816799	methionyl-tRNA formyltransferase
EFS1_RS13090	-1	13	2.839044	peptide deformylase
EFS1_RS13095	-1	13	3.000862	primosomal protein N'

EFS1_RS13140

EFS1_RS13170

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS13140	-1	13	3.070767	mannonate dehydratase
EFS1_RS13145	0	15	3.615387	PTS fructose transporter subunit IIA
EFS1_RS13150	1	16	4.101483	PTS mannose/fructose/sorbose transporter subunit
EFS1_RS13155	0	19	4.048258	PTS mannose transporter subunit IID
EFS1_RS13160	1	18	4.032078	PTS sugar transporter subunit IIC
EFS1_RS13165	1	18	4.180714	oxidoreductase
EFS1_RS13170	0	20	3.442202	2-hydroxyacid dehydrogenase

EFS1_RS13215

EFS1_RS13305

Genomic Island

LocusTag	DNBias	CDNBias	%GCBias	Product
EFS1_RS13215	-2	19	3.105683	large conductance mechanosensitive channel
EFS1_RS13220	-2	20	2.819122	hypothetical protein
EFS1_RS13230	-1	22	5.705402	hypothetical protein
EFS1_RS13235	-1	19	4.997181	trehalose operon repressor
EFS1_RS13240	0	23	5.082864	glycoside hydrolase family 65 protein
EFS1_RS13245	1	27	4.991110	beta-phosphoglucomutase
EFS1_RS13255	0	19	2.631619	hypothetical protein
EFS1_RS13260	-1	21	2.383804	hypothetical protein
EFS1_RS14545	0	19	4.380989	putative holin-like toxin
EFS1_RS14550	-1	16	3.467593	ribose-phosphate pyrophosphokinase
EFS1_RS13265	-1	16	3.492426	peptide-methionine (R)-S-oxide reductase
EFS1_RS13270	0	17	3.936820	maf-like protein
EFS1_RS13275	1	15	3.380005	DNA mismatch repair endonuclease MutL
EFS1_RS13280	1	15	2.929212	DNA mismatch repair protein MutS
EFS1_RS13285	1	13	2.522814	hypothetical protein
EFS1_RS13290	1	11	3.462739	TIGR00282 family metallophosphoesterase
EFS1_RS13295	1	9	3.622146	ribonuclease Y
EFS1_RS13300	1	9	3.329852	hypothetical protein
EFS1_RS14555	0	11	3.558463	DNA recombination/repair protein RecA
EFS1_RS13305	-1	11	3.452377	competence/damage-inducible protein A