| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | DIP_RS22975 | DIP_RS22900 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS22975 | 1 | 38 | 3.358599 | thiol reductase thioredoxin | |
| DIP_RS22970 | 1 | 34 | 3.430621 | thioredoxin-disulfide reductase | |
| DIP_RS22965 | 2 | 36 | 3.599434 | RNA polymerase sigma factor | |
| DIP_RS22960 | 1 | 36 | 3.523047 | membrane protein | |
| DIP_RS22955 | 1 | 28 | 3.995642 | hypothetical protein | |
| DIP_RS22950 | 0 | 23 | 3.096981 | NUDIX hydrolase | |
| DIP_RS22945 | 0 | 26 | 2.875719 | CCA tRNA nucleotidyltransferase | |
| DIP_RS22940 | 0 | 32 | 3.779392 | hypothetical protein | |
| DIP_RS22935 | 1 | 41 | 4.280538 | branched-chain amino acid ABC transporter | |
| DIP_RS22930 | 0 | 45 | 4.305148 | branched-chain amino acid ABC transporter | |
| DIP_RS22925 | -1 | 37 | 4.331386 | hypothetical protein | |
| DIP_RS22920 | -1 | 37 | 4.350532 | membrane protein | |
| DIP_RS22915 | -2 | 32 | 4.159390 | iron-sulfur protein | |
| DIP_RS22910 | -2 | 24 | 3.615265 | tryptophan synthase subunit alpha | |
| DIP_RS22905 | -1 | 25 | 3.927276 | tryptophan synthase subunit beta | |
| DIP_RS22900 | 0 | 26 | 3.941351 | 3-methyl-2-oxobutanoate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22960 | SECFTRNLCASE | 30 | 0.045 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22910 | UREASE | 34 | 4e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 2 | DIP_RS22855 | DIP_RS22790 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS22855 | 0 | 22 | 3.583571 | sodium:proton antiporter | |
| DIP_RS22845 | 2 | 26 | 3.929429 | hypothetical protein | |
| DIP_RS22840 | 4 | 23 | 5.299152 | hypothetical protein | |
| DIP_RS22835 | 4 | 22 | 4.734807 | hypothetical protein | |
| DIP_RS22830 | 4 | 24 | 4.935576 | ABC transporter ATP-binding protein | |
| DIP_RS22825 | 5 | 21 | 1.953043 | cobalt ABC transporter permease | |
| DIP_RS22820 | 2 | 18 | -0.892675 | glycosyl transferase family 9 | |
| DIP_RS22815 | 1 | 20 | -0.259859 | inosine-uridine preferring nucleoside hydrolase | |
| DIP_RS22810 | 1 | 18 | -0.136187 | hypothetical protein | |
| DIP_RS22805 | 1 | 28 | -1.056190 | hypothetical protein | |
| DIP_RS22800 | 1 | 17 | 0.469891 | hypothetical protein | |
| DIP_RS22795 | 0 | 20 | 1.972232 | phage resistance protein | |
| DIP_RS22790 | -1 | 22 | 4.888314 | PTS fructose transporter subunit IIA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22810 | PF06776 | 33 | 0.001 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| 3 | DIP_RS22670 | DIP_RS22180 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS22670 | -1 | 16 | 3.148800 | hypothetical protein | |
| DIP_RS22665 | -1 | 18 | 3.881771 | DNA-binding protein | |
| DIP_RS22660 | 0 | 22 | 4.659964 | hypothetical protein | |
| DIP_RS22655 | 0 | 24 | 5.071102 | membrane protein | |
| DIP_RS22650 | -1 | 26 | 4.628017 | hydrolase | |
| DIP_RS22645 | -2 | 17 | 2.010394 | carbohydrate kinase | |
| DIP_RS22640 | -2 | 14 | 0.228122 | DNA glycosylase | |
| DIP_RS22635 | -3 | 17 | 0.301636 | DNA starvation/stationary phase protection | |
| DIP_RS22630 | -2 | 17 | 0.824727 | membrane protein | |
| DIP_RS22625 | -3 | 15 | 0.322957 | hypothetical protein | |
| DIP_RS22620 | -1 | 17 | 0.388379 | DNA-binding protein | |
| DIP_RS22615 | 3 | 18 | 2.294340 | membrane protein | |
| DIP_RS22610 | 4 | 20 | 2.025066 | short chain dehydrogenase | |
| DIP_RS22605 | 4 | 20 | 1.466091 | universal stress protein | |
| DIP_RS22600 | 4 | 20 | 1.606478 | MarR family transcriptional regulator | |
| DIP_RS22595 | 4 | 20 | 2.006021 | penicillin-binding protein | |
| DIP_RS22590 | 1 | 33 | 2.252066 | membrane protein | |
| DIP_RS22585 | 0 | 27 | 4.444253 | hypothetical protein | |
| DIP_RS22580 | -3 | 23 | 4.345135 | 30S ribosomal protein S6 | |
| DIP_RS22575 | -3 | 22 | 4.319101 | single-stranded DNA-binding protein | |
| DIP_RS22570 | -2 | 22 | 3.823552 | 50S ribosomal protein L9 | |
| DIP_RS22565 | 0 | 22 | 3.610158 | replicative DNA helicase | |
| DIP_RS22560 | -2 | 25 | 5.059020 | membrane protein | |
| DIP_RS22555 | -1 | 19 | 3.833885 | carbonate dehydratase | |
| DIP_RS22550 | 0 | 30 | 4.414438 | transporter | |
| DIP_RS22545 | -1 | 29 | 3.313164 | thiol reductase thioredoxin | |
| DIP_RS22540 | -2 | 31 | 3.861678 | hypothetical protein | |
| DIP_RS22535 | -1 | 32 | 4.367476 | NYN domain-containing protein | |
| DIP_RS22530 | -1 | 31 | 3.073856 | GntR family transcriptional regulator | |
| DIP_RS22525 | -2 | 29 | 2.440555 | ABC transporter ATP-binding protein | |
| DIP_RS22520 | -2 | 29 | 1.671175 | membrane protein | |
| DIP_RS22500 | -2 | 26 | 2.485347 | 23S rRNA pseudouridylate synthase | |
| DIP_RS22495 | -2 | 32 | 2.210174 | universal stress protein | |
| DIP_RS22490 | -1 | 31 | 2.393339 | membrane protein | |
| DIP_RS22485 | -2 | 29 | 3.182794 | membrane protein insertase YidC | |
| DIP_RS22475 | -3 | 26 | 3.828273 | class E sortase | |
| DIP_RS22465 | -1 | 26 | 3.232048 | antiporter | |
| DIP_RS22460 | 0 | 23 | 4.310296 | hypothetical protein | |
| DIP_RS22455 | 2 | 23 | 3.977466 | two-component sensor histidine kinase | |
| DIP_RS22450 | 2 | 23 | 3.573502 | DNA-binding response regulator | |
| DIP_RS22445 | 3 | 23 | 2.904703 | histone | |
| DIP_RS22440 | 2 | 24 | 3.620470 | hypothetical protein | |
| DIP_RS22435 | 1 | 21 | 2.781598 | recombinase RecB | |
| DIP_RS22430 | 1 | 15 | -0.184234 | alpha-1,2-mannosyltransferase | |
| DIP_RS22425 | 0 | 17 | -2.405305 | oxidoreductase | |
| DIP_RS22420 | 1 | 24 | -3.648113 | superoxide dismutase [Mn] | |
| DIP_RS22415 | 0 | 23 | -2.785990 | peptide-methionine (S)-S-oxide reductase | |
| DIP_RS22410 | 0 | 24 | -2.837950 | nicotinate-nucleotide diphosphorylase | |
| DIP_RS22405 | 0 | 19 | -0.679407 | aspartate oxidase | |
| DIP_RS22400 | -3 | 18 | 1.554521 | quinolinate synthetase | |
| DIP_RS22395 | -3 | 29 | 3.080783 | hypothetical protein | |
| DIP_RS22390 | -3 | 31 | 4.652924 | L-lactate dehydrogenase | |
| DIP_RS22385 | -2 | 15 | 2.108097 | glycerophosphoryl diester phosphodiesterase | |
| DIP_RS22380 | -2 | 15 | 2.066323 | preprotein translocase subunit SecA | |
| DIP_RS22375 | 0 | 13 | 2.218183 | SGNH hydrolase | |
| DIP_RS22370 | 1 | 15 | 2.649608 | sodium:alanine symporter | |
| DIP_RS22365 | 1 | 14 | 2.840769 | LytR family transcriptional regulator | |
| DIP_RS22360 | 0 | 13 | 0.968039 | nitric-oxide reductase large subunit | |
| DIP_RS22355 | 1 | 22 | 3.770201 | membrane protein | |
| DIP_RS22350 | -1 | 19 | 4.151327 | amidase | |
| DIP_RS22345 | -1 | 32 | 3.875051 | prephenate dehydratase | |
| DIP_RS22340 | -2 | 23 | 2.924766 | phosphoglycerate mutase | |
| DIP_RS22335 | -3 | 17 | 2.418862 | ATPase AAA | |
| DIP_RS22330 | -1 | 24 | 4.426424 | hypothetical protein | |
| DIP_RS22325 | -1 | 26 | 5.343609 | hypothetical protein | |
| DIP_RS22320 | -1 | 27 | 5.415542 | GntR family transcriptional regulator | |
| DIP_RS22315 | 0 | 26 | 5.066646 | serine--tRNA ligase | |
| DIP_RS22310 | 1 | 23 | 4.588174 | haloacid dehalogenase | |
| DIP_RS22305 | -1 | 24 | 4.228259 | acyltransferase | |
| DIP_RS22300 | 0 | 37 | 3.952747 | glycerol-3-phosphate dehydrogenase | |
| DIP_RS22295 | 1 | 28 | 1.836027 | glycerol transporter | |
| DIP_RS22290 | 1 | 23 | 0.530371 | glycerol kinase | |
| DIP_RS22285 | 0 | 29 | -3.389034 | hypothetical protein | |
| DIP_RS22280 | 3 | 17 | 0.123521 | transposase | |
| DIP_RS22275 | 5 | 23 | 1.231114 | transposase | |
| DIP_RS22265 | 4 | 18 | 0.636074 | transposase | |
| DIP_RS22260 | 4 | 16 | 0.692301 | hypothetical protein | |
| DIP_RS22255 | 4 | 16 | 0.512715 | collagen-binding protein | |
| DIP_RS22250 | 4 | 17 | -0.099731 | surface-anchored fimbrial subunit | |
| DIP_RS22245 | 1 | 19 | -2.321583 | class C sortase | |
| DIP_RS22240 | 0 | 24 | -2.954226 | class C sortase | |
| DIP_RS22235 | -1 | 25 | -2.585077 | surface-anchored protein | |
| DIP_RS22230 | 0 | 32 | -4.985868 | hypothetical protein | |
| DIP_RS22225 | -2 | 30 | -5.834444 | hypothetical protein | |
| DIP_RS22220 | 0 | 32 | -7.092415 | hypothetical protein | |
| DIP_RS22215 | 0 | 34 | -7.492393 | single-stranded DNA-binding protein | |
| DIP_RS22210 | 2 | 35 | -7.281603 | type I-E CRISPR-associated endoribonuclease | |
| DIP_RS22200 | 2 | 38 | -7.954292 | subtype I-E CRISPR-associated endonuclease Cas1 | |
| DIP_RS22190 | 3 | 39 | -7.729872 | CRISPR-associated helicase/endonuclease Cas3 | |
| DIP_RS22185 | 2 | 21 | -3.402310 | type I-E CRISPR-associated protein | |
| DIP_RS22180 | 2 | 21 | -2.566525 | CRISPR-associated protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22665 | CHANLCOLICIN | 30 | 0.009 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22635 | HELNAPAPROT | 116 | 6e-36 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22610 | DHBDHDRGNASE | 69 | 3e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22575 | cloacin | 34 | 3e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22560 | TCRTETA | 55 | 3e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22535 | IGASERPTASE | 47 | 2e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22525 | PF05272 | 28 | 0.041 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22480 | 60KDINNERMP | 78 | 2e-17 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22465 | TCRTETB | 41 | 1e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22455 | TYPE3IMSPROT | 32 | 0.004 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22450 | HTHFIS | 57 | 6e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22325 | TRNSINTIMINR | 30 | 0.010 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22235 | PYOCINKILLER | 28 | 0.037 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 4 | DIP_RS21525 | DIP_RS21185 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS21525 | 0 | 23 | -3.634401 | transposase | |
| DIP_RS21520 | 0 | 13 | -1.987826 | hypothetical protein | |
| DIP_RS21510 | -1 | 14 | 0.504835 | hypothetical protein | |
| DIP_RS21505 | -1 | 13 | -2.783905 | hypothetical protein | |
| DIP_RS21495 | -1 | 13 | -0.795691 | membrane protein | |
| DIP_RS21490 | 0 | 11 | -2.287262 | hypothetical protein | |
| DIP_RS21485 | 0 | 12 | -3.038991 | membrane protein | |
| DIP_RS21480 | 0 | 14 | -3.265837 | hypothetical protein | |
| DIP_RS21475 | 0 | 13 | -3.803182 | surface-anchored fimbrial associated protein | |
| DIP_RS21470 | 0 | 18 | -0.328934 | adenylosuccinate synthetase | |
| DIP_RS21465 | 2 | 14 | -0.028170 | surface anchored protein | |
| DIP_RS21460 | -1 | 22 | 2.059485 | hypothetical protein | |
| DIP_RS21455 | -1 | 20 | 2.586306 | hypothetical protein | |
| DIP_RS21450 | -1 | 25 | 3.831407 | phosphoribosyltransferase | |
| DIP_RS21445 | -2 | 23 | 3.819320 | phosphoribosylglycinamide formyltransferase | |
| DIP_RS21440 | -2 | 30 | 4.295339 | pyridine nucleotide-disulfide oxidoreductase | |
| DIP_RS21435 | -2 | 25 | 4.113958 | phosphate acetyltransferase | |
| DIP_RS21430 | -1 | 32 | 4.596480 | acetate kinase | |
| DIP_RS21425 | -1 | 37 | 5.009188 | serine/threonine protein kinase | |
| DIP_RS21420 | 0 | 43 | 4.195973 | ABC transporter | |
| DIP_RS21415 | 0 | 47 | 4.439439 | hypothetical protein | |
| DIP_RS21410 | 0 | 47 | 4.439748 | ABC transporter | |
| DIP_RS21405 | 0 | 50 | 4.503669 | multidrug ABC transporter permease | |
| DIP_RS21400 | 1 | 48 | 4.797437 | hypothetical protein | |
| DIP_RS21395 | -1 | 45 | 5.063073 | cardiolipin synthase | |
| DIP_RS21390 | -2 | 33 | 5.225010 | exonuclease | |
| DIP_RS21385 | -2 | 30 | 5.366104 | acetyltransferase | |
| DIP_RS21380 | -2 | 29 | 5.157974 | peptide deformylase | |
| DIP_RS21375 | -2 | 37 | 5.373306 | hypothetical protein | |
| DIP_RS21370 | -3 | 35 | 5.020800 | hypothetical protein | |
| DIP_RS21365 | -2 | 37 | 4.665217 | carboxylate--amine ligase | |
| DIP_RS21360 | -1 | 36 | 3.854580 | hypothetical protein | |
| DIP_RS21355 | 0 | 23 | 0.414057 | hypothetical protein | |
| DIP_RS21350 | 0 | 17 | -0.807780 | dipeptidase | |
| DIP_RS21345 | 2 | 20 | -2.522537 | hypothetical protein | |
| DIP_RS21340 | 1 | 21 | -3.064111 | hypothetical protein | |
| DIP_RS21335 | 1 | 20 | -3.119690 | glutamine amidotransferase | |
| DIP_RS21330 | 0 | 13 | -0.401611 | excinuclease ABC subunit A | |
| DIP_RS21325 | 0 | 20 | 1.771731 | alkene reductase | |
| DIP_RS21320 | 2 | 33 | 4.646015 | transposase | |
| DIP_RS21315 | 1 | 27 | 3.177092 | hypothetical protein | |
| DIP_RS23050 | 3 | 31 | 2.935752 | hypothetical protein | |
| DIP_RS21305 | 2 | 30 | 2.343458 | RNA-splicing ligase RtcB | |
| DIP_RS21300 | 1 | 23 | -2.399206 | hypothetical protein | |
| DIP_RS21295 | 1 | 20 | -3.110401 | hypothetical protein | |
| DIP_RS21290 | 1 | 21 | -3.824845 | molecular chaperone GroEL | |
| DIP_RS21285 | 2 | 21 | -4.151944 | transposase | |
| DIP_RS21280 | 1 | 19 | -4.758394 | hypothetical protein | |
| DIP_RS21275 | 2 | 16 | -3.174927 | polyphosphate kinase 2 | |
| DIP_RS21270 | 1 | 20 | -1.284384 | lipase | |
| DIP_RS21265 | 1 | 14 | -4.251014 | membrane protein | |
| DIP_RS21260 | 3 | 14 | -1.052412 | surface-anchored fimbrial subunit | |
| DIP_RS21255 | 3 | 16 | -0.522411 | class C sortase | |
| DIP_RS21250 | 3 | 18 | -0.476606 | surface anchored protein | |
| DIP_RS21240 | 2 | 17 | -0.466444 | surface-anchored membrane protein | |
| DIP_RS21235 | 3 | 23 | 6.273715 | amino acid adenylation protein | |
| DIP_RS21230 | 0 | 34 | 4.131647 | MarR family transcriptional regulator | |
| DIP_RS21225 | 1 | 49 | 4.694780 | sulfurtransferase | |
| DIP_RS21220 | 1 | 54 | 4.786010 | inorganic pyrophosphatase | |
| DIP_RS21215 | 1 | 57 | 5.447070 | D-alanyl-D-alanine carboxypeptidase | |
| DIP_RS21210 | 1 | 55 | 5.806956 | tRNA(Ile)-lysidine synthetase | |
| DIP_RS21205 | 1 | 52 | 4.804419 | hypoxanthine phosphoribosyltransferase | |
| DIP_RS21200 | -1 | 50 | 5.708465 | cell division protein FtsH | |
| DIP_RS21195 | 0 | 42 | 6.050081 | GTP cyclohydrolase I FolE | |
| DIP_RS21190 | -2 | 30 | 4.941268 | hypothetical protein | |
| DIP_RS21185 | -1 | 30 | 4.333592 | dihydropteroate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21510 | NUCEPIMERASE | 34 | 0.001 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21490 | PF02370 | 28 | 0.033 | M protein repeat | |
>PF02370#M protein repeat | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21430 | ACETATEKNASE | 510 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21425 | YERSSTKINASE | 37 | 3e-04 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21385 | SACTRNSFRASE | 45 | 9e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21370 | IGASERPTASE | 28 | 0.019 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21345 | V8PROTEASE | 42 | 6e-07 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21230 | PF05272 | 29 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21200 | HTHFIS | 32 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 5 | DIP_RS21125 | DIP_RS20940 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS21125 | 0 | 32 | 3.514328 | transposase | |
| DIP_RS21120 | -1 | 32 | 3.578454 | lysine--tRNA ligase | |
| DIP_RS21115 | -2 | 25 | 3.373599 | hypothetical protein | |
| DIP_RS21110 | -1 | 29 | 3.570917 | hypothetical protein | |
| DIP_RS21105 | -1 | 26 | 3.343261 | hypothetical protein | |
| DIP_RS21100 | -2 | 23 | 3.467217 | NDP-hexose 4-ketoreductase | |
| DIP_RS21095 | -2 | 14 | 2.649871 | membrane protein | |
| DIP_RS21090 | -1 | 14 | 2.388628 | adenine glycosylase | |
| DIP_RS21085 | -1 | 15 | 1.913824 | beta-hydroxylase | |
| DIP_RS21080 | -1 | 14 | 2.139456 | hypothetical protein | |
| DIP_RS21075 | -1 | 17 | 2.673783 | DNA repair protein RadA | |
| DIP_RS21070 | -1 | 18 | 3.138359 | hypothetical protein | |
| DIP_RS21065 | 0 | 30 | 4.613728 | hypothetical protein | |
| DIP_RS21060 | 0 | 28 | 4.887693 | CarD family transcriptional regulator | |
| DIP_RS21055 | -1 | 23 | 5.137546 | 2-C-methyl-D-erythritol 4-phosphate | |
| DIP_RS21050 | -1 | 24 | 5.065864 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate | |
| DIP_RS21045 | -2 | 19 | 3.837932 | cysteine--tRNA ligase | |
| DIP_RS21040 | -1 | 23 | 3.301770 | 23S rRNA | |
| DIP_RS21035 | 1 | 42 | 1.985595 | LacI family transcriptional regulator | |
| DIP_RS21030 | 2 | 47 | -0.569998 | trehalose-phosphatase | |
| DIP_RS21025 | 2 | 48 | -1.705175 | hypothetical protein | |
| DIP_RS21020 | 2 | 44 | -2.767589 | trehalose-6-phosphate synthase | |
| DIP_RS21015 | 2 | 36 | -4.079122 | hypothetical protein | |
| DIP_RS21010 | 2 | 39 | -4.032792 | amino acid export carrier protein | |
| DIP_RS21000 | 1 | 27 | -5.664707 | *integrase | |
| DIP_RS20995 | 3 | 32 | -5.556311 | hypothetical protein | |
| DIP_RS20990 | 3 | 34 | -4.079536 | hypothetical protein | |
| DIP_RS23045 | 2 | 27 | -2.692081 | hypothetical protein | |
| DIP_RS20980 | 0 | 24 | 1.036691 | hypothetical protein | |
| DIP_RS23040 | -1 | 23 | 1.331254 | hypothetical protein | |
| DIP_RS20970 | -1 | 25 | 2.461271 | hypothetical protein | |
| DIP_RS20965 | -1 | 27 | 3.422063 | integrase | |
| DIP_RS20960 | 1 | 30 | 4.175138 | amino acid transporter | |
| DIP_RS20955 | 1 | 32 | 5.365518 | pyruvate dehydrogenase | |
| DIP_RS20950 | 1 | 35 | 5.587296 | transposase | |
| DIP_RS20945 | 2 | 29 | 4.850193 | acetyltransferase | |
| DIP_RS20940 | 1 | 22 | 3.530043 | sulfonamide-resistant dihydropteroate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS21100 | HTHFIS | 32 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20940 | SACTRNSFRASE | 38 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 6 | DIP_RS20830 | DIP_RS20805 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS20830 | 0 | 31 | 3.273938 | PTS beta-glucoside transporter subunit IIABC | |
| DIP_RS20825 | -1 | 31 | 3.565190 | ribonucleotide-diphosphate reductase subunit | |
| DIP_RS20820 | -1 | 28 | 3.917583 | ribonucleotide reductase assembly protein NrdI | |
| DIP_RS20815 | -1 | 20 | 3.917583 | membrane protein | |
| DIP_RS20810 | 0 | 16 | 3.250524 | hypothetical protein | |
| DIP_RS20805 | -1 | 20 | 3.112371 | amidophosphoribosyltransferase |
| 7 | DIP_RS20455 | DIP_RS20180 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS20455 | 0 | 23 | 3.276594 | ATP-dependent Clp protease adaptor ClpS | |
| DIP_RS20450 | -1 | 17 | 3.730318 | hypothetical protein | |
| DIP_RS20445 | 0 | 17 | 4.265970 | peptidase | |
| DIP_RS20440 | 0 | 18 | 3.127004 | rhomboid family intramembrane serine protease | |
| DIP_RS20435 | 0 | 18 | 2.743708 | glutamate racemase | |
| DIP_RS20430 | 1 | 19 | 2.487862 | hypothetical protein | |
| DIP_RS20425 | 1 | 34 | 4.725859 | ribonuclease PH | |
| DIP_RS20420 | 1 | 35 | 4.845226 | non-canonical purine NTP pyrophosphatase | |
| DIP_RS20415 | 1 | 35 | 4.886972 | membrane protein | |
| DIP_RS20410 | 1 | 34 | 4.976216 | hypothetical protein | |
| DIP_RS23035 | 1 | 34 | 5.108885 | *hypothetical protein | |
| DIP_RS20395 | 2 | 35 | 5.232593 | 3-oxoacyl-ACP synthase | |
| DIP_RS20390 | 0 | 32 | 3.886881 | holo-ACP synthase | |
| DIP_RS20385 | -1 | 32 | 2.440972 | TetR family transcriptional regulator | |
| DIP_RS20380 | 1 | 23 | 2.053791 | peroxiredoxin | |
| DIP_RS20375 | 2 | 27 | 2.341739 | hypothetical protein | |
| DIP_RS20370 | 4 | 29 | -0.279885 | monooxygenase | |
| DIP_RS20365 | 9 | 28 | -0.423193 | hypothetical protein | |
| DIP_RS20360 | 9 | 28 | -0.978218 | hypothetical protein | |
| DIP_RS20355 | 11 | 29 | -0.492632 | integrase | |
| DIP_RS23030 | 12 | 29 | -1.820808 | triple helix repeat-containing collagen | |
| DIP_RS20345 | 12 | 31 | -2.768887 | hypothetical protein | |
| DIP_RS20340 | 12 | 31 | -1.103049 | hypothetical protein | |
| DIP_RS20335 | 7 | 30 | 0.003653 | hypothetical protein | |
| DIP_RS20330 | 7 | 31 | 1.032996 | hypothetical protein | |
| DIP_RS20325 | 6 | 31 | 1.121240 | hypothetical protein | |
| DIP_RS20320 | 6 | 31 | 3.150623 | hypothetical protein | |
| DIP_RS20315 | 6 | 31 | 4.466439 | hypothetical protein | |
| DIP_RS20310 | 7 | 30 | 4.401304 | hypothetical protein | |
| DIP_RS20305 | 7 | 31 | 4.829063 | hypothetical protein | |
| DIP_RS20300 | 7 | 29 | 3.814447 | hypothetical protein | |
| DIP_RS20295 | 6 | 28 | 3.248939 | hypothetical protein | |
| DIP_RS20290 | 4 | 25 | 1.255858 | terminase | |
| DIP_RS20285 | 3 | 26 | -3.823507 | hypothetical protein | |
| DIP_RS20275 | 0 | 23 | -0.387417 | hypothetical protein | |
| DIP_RS20265 | -1 | 19 | -0.717351 | hypothetical protein | |
| DIP_RS20260 | -1 | 23 | -0.078296 | hypothetical protein | |
| DIP_RS20255 | 0 | 33 | 0.678309 | hypothetical protein | |
| DIP_RS20250 | 1 | 38 | 1.671175 | hypothetical protein | |
| DIP_RS20235 | 1 | 31 | 2.645577 | *hypothetical protein | |
| DIP_RS20230 | 3 | 37 | 1.328366 | dihydrodipicolinate synthase family protein | |
| DIP_RS20220 | 1 | 33 | 1.528390 | *oligoribonuclease | |
| DIP_RS20215 | 1 | 27 | 1.823410 | short-chain dehydrogenase/reductase | |
| DIP_RS20210 | 1 | 24 | 3.282048 | NADPH:quinone dehydrogenase | |
| DIP_RS20200 | 1 | 27 | 3.129003 | *MFS transporter | |
| DIP_RS20195 | 1 | 26 | 2.817403 | transposase | |
| DIP_RS20190 | -1 | 30 | 3.258838 | DNA-binding protein | |
| DIP_RS20185 | 0 | 32 | 3.418356 | hypothetical protein | |
| DIP_RS20180 | 0 | 31 | 3.622615 | carbon starvation protein CstA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20390 | ENTSNTHTASED | 27 | 0.030 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20385 | HTHTETR | 62 | 3e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20365 | ISCHRISMTASE | 28 | 0.009 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20215 | DHBDHDRGNASE | 94 | 4e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20210 | NUCEPIMERASE | 29 | 0.029 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20200 | TCRTETA | 31 | 0.013 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 8 | DIP_RS19435 | DIP_RS19385 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS19435 | -1 | 17 | -3.660494 | GntR family transcriptional regulator | |
| DIP_RS19430 | 4 | 17 | -4.674799 | sodium:proton antiporter | |
| DIP_RS19425 | 5 | 14 | -4.136336 | hypothetical protein | |
| DIP_RS19420 | 4 | 17 | -4.116934 | hypothetical protein | |
| DIP_RS19415 | 3 | 25 | -3.767305 | hypothetical protein | |
| DIP_RS19410 | 3 | 26 | -4.079863 | hypothetical protein | |
| DIP_RS19405 | 3 | 25 | -3.880279 | hypothetical protein | |
| DIP_RS19400 | 1 | 27 | -3.080349 | hypothetical protein | |
| DIP_RS19395 | 3 | 28 | -2.974545 | hypothetical protein | |
| DIP_RS19390 | 4 | 26 | -3.036803 | hypothetical protein | |
| DIP_RS19385 | 1 | 18 | -3.577241 | transposase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS19435 | FLGMOTORFLIG | 29 | 0.021 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS19390 | RTXTOXINA | 38 | 3e-04 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 9 | DIP_RS19210 | DIP_RS19135 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS19210 | 0 | 22 | -3.412098 | transcriptional regulator | |
| DIP_RS19205 | 0 | 24 | -3.338000 | alpha 1,6 mannopyranosyltransferase | |
| DIP_RS19200 | 1 | 25 | -3.020926 | geranylgeranyl pyrophosphate synthase | |
| DIP_RS19195 | 2 | 26 | -3.483066 | methylenetetrahydrofolate reductase [NAD(P)H] | |
| DIP_RS19190 | 2 | 29 | -3.421829 | acetyltransferase | |
| DIP_RS19185 | 1 | 28 | -4.207075 | hypothetical protein | |
| DIP_RS19180 | 0 | 26 | -3.486995 | membrane protein | |
| DIP_RS19175 | -1 | 27 | -3.181461 | division/cell wall cluster transcriptional | |
| DIP_RS19170 | -2 | 25 | -3.214827 | ribosomal RNA small subunit methyltransferase H | |
| DIP_RS19165 | -3 | 24 | -2.728315 | hypothetical protein | |
| DIP_RS19160 | -2 | 24 | -3.129932 | cell division protein FtsI | |
| DIP_RS19155 | -1 | 23 | -2.570548 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, | |
| DIP_RS19150 | -1 | 23 | -2.698952 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- | |
| DIP_RS19145 | -1 | 25 | -3.201506 | phospho-N-acetylmuramoyl-pentapeptide- | |
| DIP_RS19140 | -1 | 24 | -2.830732 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |
| DIP_RS19135 | -1 | 24 | -3.087315 | cell division protein FtsW |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS19190 | SACTRNSFRASE | 39 | 4e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 10 | DIP_RS19000 | DIP_RS18970 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS19000 | -1 | 20 | -3.644110 | TetR family transcriptional regulator | |
| DIP_RS18995 | -1 | 21 | -3.630830 | hypothetical protein | |
| DIP_RS18990 | -2 | 23 | -4.419756 | hypothetical protein | |
| DIP_RS18985 | -1 | 24 | -4.048819 | histidinol dehydrogenase | |
| DIP_RS18980 | -1 | 25 | -3.347137 | histidinol-phosphate aminotransferase | |
| DIP_RS18975 | -2 | 28 | -3.537575 | imidazoleglycerol-phosphate dehydratase | |
| DIP_RS18970 | 0 | 29 | -3.143693 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS19000 | TETREPRESSOR | 86 | 5e-23 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS18995 | PF05616 | 30 | 0.007 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| 11 | DIP_RS16505 | DIP_RS16445 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS16505 | 2 | 23 | -1.846059 | TIGR02611 family protein | |
| DIP_RS16500 | 1 | 23 | -1.655398 | ABC transporter substrate-binding protein | |
| DIP_RS16495 | 2 | 23 | -1.264904 | iron-siderophore uptake system protein | |
| DIP_RS16490 | 0 | 22 | -2.222595 | membrane protein | |
| DIP_RS16485 | -1 | 21 | -3.208997 | ABC transporter ATP-binding protein | |
| DIP_RS16480 | 2 | 30 | -0.326697 | hypothetical protein | |
| DIP_RS16475 | 3 | 31 | 0.102205 | methylmalonyl-CoA epimerase | |
| DIP_RS16470 | 3 | 35 | 0.976630 | endonuclease NucS | |
| DIP_RS16465 | 5 | 37 | 1.961707 | hypothetical protein | |
| DIP_RS16460 | 6 | 41 | 2.572262 | ATP synthase epsilon chain | |
| DIP_RS16455 | 6 | 43 | 2.551302 | ATP synthase subunit beta | |
| DIP_RS16450 | 5 | 37 | 1.414446 | ATP synthase subunit gamma | |
| DIP_RS16445 | 3 | 33 | 1.313154 | ATP synthase subunit alpha |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16500 | FERRIBNDNGPP | 88 | 4e-22 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 12 | DIP_RS16345 | DIP_RS16270 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS16345 | 1 | 20 | -3.504756 | hypothetical protein | |
| DIP_RS16335 | 2 | 21 | -3.926582 | *hypothetical protein | |
| DIP_RS16330 | 1 | 19 | -3.387248 | MarR family transcriptional regulator | |
| DIP_RS16325 | -1 | 16 | -3.358711 | polyisoprenoid-binding protein | |
| DIP_RS16320 | -1 | 18 | -3.230026 | ATP-binding protein | |
| DIP_RS16315 | -2 | 14 | -2.298777 | DNA repair exonuclease | |
| DIP_RS16310 | -2 | 14 | -2.121443 | hypothetical protein | |
| DIP_RS16305 | -1 | 9 | -0.880614 | ATP-dependent helicase | |
| DIP_RS16300 | -2 | 17 | -0.501139 | sodium:proline symporter | |
| DIP_RS16295 | 0 | 15 | -3.859739 | hypothetical protein | |
| DIP_RS16290 | 0 | 16 | -2.935465 | membrane protein | |
| DIP_RS16285 | 0 | 17 | -2.692919 | hypothetical protein | |
| DIP_RS16280 | -1 | 17 | -2.920374 | DEAD/DEAH box helicase | |
| DIP_RS16275 | -1 | 18 | -4.228999 | DNA mismatch repair protein MutT | |
| DIP_RS16270 | -1 | 17 | -3.742090 | helicase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16320 | RTXTOXIND | 38 | 1e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16280 | SECETRNLCASE | 38 | 1e-05 | Bacterial translocase SecE signature. | |
>SECETRNLCASE#Bacterial translocase SecE signature. | |||||
| 13 | DIP_RS16200 | DIP_RS16010 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS16200 | -1 | 36 | 3.393037 | alpha-ketoglutarate decarboxylase | |
| DIP_RS16195 | 0 | 30 | 2.707134 | hypothetical protein | |
| DIP_RS16190 | 1 | 36 | 3.337767 | membrane protein | |
| DIP_RS16185 | 3 | 41 | 3.183483 | magnesium transporter | |
| DIP_RS16180 | 1 | 31 | 2.075336 | membrane protein | |
| DIP_RS16175 | 0 | 19 | 1.241723 | sodium:proton antiporter | |
| DIP_RS16170 | 0 | 17 | 0.749380 | Sec-independent protein translocase TatB | |
| DIP_RS16165 | 0 | 22 | 1.365545 | anti-sigma factor | |
| DIP_RS16160 | 3 | 32 | 2.077535 | RNA polymerase sigma factor SigE | |
| DIP_RS16155 | 2 | 27 | 1.962301 | methyltransferase | |
| DIP_RS16150 | 2 | 26 | 1.781584 | glucose-1-phosphate adenylyltransferase | |
| DIP_RS16145 | 3 | 31 | 3.093510 | glycosyl transferase family 1 | |
| DIP_RS16140 | 3 | 23 | 3.219016 | decarboxylase | |
| DIP_RS16135 | 2 | 18 | 2.899728 | beta-fructosidase | |
| DIP_RS16130 | 0 | 17 | 2.262351 | SAM-dependent methyltransferase | |
| DIP_RS16125 | -1 | 16 | 1.883271 | hypothetical protein | |
| DIP_RS16120 | 0 | 17 | 2.405326 | glucosyl-3-phosphoglycerate synthase | |
| DIP_RS16115 | 0 | 25 | 2.871760 | dihydropteroate synthase | |
| DIP_RS16110 | 2 | 39 | 3.282293 | Rossman fold protein, TIGR00730 family | |
| DIP_RS16105 | 3 | 42 | 3.976248 | succinyl-diaminopimelate desuccinylase | |
| DIP_RS16100 | 2 | 42 | 3.595230 | succinyltransferase | |
| DIP_RS16095 | 3 | 44 | 4.171749 | amino acid transporter | |
| DIP_RS16090 | 1 | 34 | 4.433661 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | |
| DIP_RS16085 | 1 | 26 | 3.537997 | amino acid transporter | |
| DIP_RS16080 | 1 | 21 | 2.361300 | hypothetical protein | |
| DIP_RS16075 | 1 | 20 | 2.411691 | membrane protein | |
| DIP_RS16070 | 0 | 19 | 2.709077 | RNA pseudouridine synthase | |
| DIP_RS16065 | -2 | 20 | 2.777800 | succinyldiaminopimelate transaminase | |
| DIP_RS16060 | 0 | 21 | 2.651211 | ferredoxin | |
| DIP_RS16055 | 0 | 24 | 2.691964 | membrane protein | |
| DIP_RS16050 | 0 | 26 | 2.954242 | 1D-myo-inositol | |
| DIP_RS16045 | 0 | 26 | 3.273192 | hypothetical protein | |
| DIP_RS16040 | -1 | 26 | 1.989662 | GTP-binding protein | |
| DIP_RS16035 | 1 | 30 | -1.249102 | hypothetical protein | |
| DIP_RS16030 | 1 | 27 | -3.717717 | hypothetical protein | |
| DIP_RS16025 | 1 | 28 | -4.888687 | arsenate reductase (glutaredoxin) | |
| DIP_RS16020 | -1 | 20 | -3.615660 | peptidase | |
| DIP_RS16015 | -2 | 18 | -4.538657 | hypothetical protein | |
| DIP_RS16010 | -3 | 15 | -3.208428 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16200 | GPOSANCHOR | 34 | 0.005 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16185 | FLGMOTORFLIG | 32 | 0.003 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16170 | TATBPROTEIN | 55 | 3e-12 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16040 | TCRTETOQM | 179 | 1e-50 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS16020 | V8PROTEASE | 38 | 1e-05 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 14 | DIP_RS15740 | DIP_RS15710 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS15740 | 1 | 14 | 3.136604 | ABC transporter | |
| DIP_RS15735 | 2 | 28 | 3.701618 | reductase | |
| DIP_RS15730 | 3 | 34 | 3.969351 | C4-dicarboxylate ABC transporter | |
| DIP_RS15725 | 4 | 42 | 3.513249 | LysR family transcriptional regulator | |
| DIP_RS15720 | 3 | 34 | 2.515359 | bifunctional N-acetylglucosamine-1-phosphate | |
| DIP_RS15715 | 3 | 27 | 2.188842 | ribose-phosphate pyrophosphokinase | |
| DIP_RS15710 | 4 | 20 | 1.388701 | type I pullulanase |
| 15 | DIP_RS15355 | DIP_RS15260 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS15355 | 2 | 24 | 4.214937 | thymidylate synthase | |
| DIP_RS15350 | 3 | 29 | 5.719772 | diacylglycerol kinase | |
| DIP_RS15345 | 3 | 35 | 6.584387 | NrdH-redoxin | |
| DIP_RS15340 | 3 | 37 | 7.475508 | precorrin-6A synthase (deacetylating) | |
| DIP_RS15335 | 5 | 42 | 8.728935 | hypothetical protein | |
| DIP_RS15325 | 6 | 45 | 9.434169 | *hypothetical protein | |
| DIP_RS15320 | 7 | 46 | 9.888352 | hypothetical protein | |
| DIP_RS15315 | 8 | 49 | 10.889097 | integrase | |
| DIP_RS15310 | 11 | 45 | 11.102797 | hypothetical protein | |
| DIP_RS15305 | 8 | 41 | 7.683931 | hypothetical protein | |
| DIP_RS15300 | 2 | 33 | 0.700302 | hypothetical protein | |
| DIP_RS15295 | 1 | 26 | 1.818829 | hypothetical protein | |
| DIP_RS15290 | 2 | 35 | 3.918765 | hypothetical protein | |
| DIP_RS15285 | 1 | 35 | 3.965227 | hypothetical protein | |
| DIP_RS15280 | 1 | 32 | 3.539985 | hypothetical protein | |
| DIP_RS15275 | 2 | 34 | 4.244468 | hypothetical protein | |
| DIP_RS15270 | 3 | 38 | 6.052217 | DNA methylase | |
| DIP_RS15265 | 3 | 38 | 6.221837 | DNA restriction-modification system, restriction | |
| DIP_RS15260 | 3 | 27 | 2.837950 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS15340 | BCTERIALGSPD | 30 | 0.013 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS15265 | TONBPROTEIN | 33 | 0.003 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 16 | DIP_RS15145 | DIP_RS15040 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS15145 | -1 | 26 | 3.269163 | cold-shock protein | |
| DIP_RS15135 | -2 | 31 | 2.972697 | hypothetical protein | |
| DIP_RS15130 | -1 | 28 | 2.221160 | hypothetical protein | |
| DIP_RS15125 | -1 | 25 | 3.070520 | DNA-binding protein | |
| DIP_RS15120 | 1 | 26 | 2.405945 | helicase | |
| DIP_RS15115 | 0 | 21 | 0.799231 | membrane protein | |
| DIP_RS15110 | 0 | 18 | 2.059451 | aminotransferase | |
| DIP_RS15090 | 1 | 19 | 2.391039 | transposase | |
| DIP_RS15085 | 2 | 23 | 3.695239 | transposase | |
| DIP_RS15080 | 0 | 17 | -0.864745 | methyltransferase | |
| DIP_RS15075 | 1 | 21 | -2.371028 | cupin | |
| DIP_RS15070 | 1 | 25 | -4.352638 | integrase | |
| DIP_RS15065 | 2 | 27 | -6.439755 | transposase | |
| DIP_RS15060 | 1 | 25 | -6.443564 | transposase | |
| DIP_RS15055 | 0 | 25 | -6.968045 | lantibiotic ABC transporter permease | |
| DIP_RS15050 | 0 | 22 | -6.171002 | lantibiotic ABC transporter ATP-binding protein | |
| DIP_RS15045 | 0 | 19 | -5.718725 | lantibiotic ABC transporter permease | |
| DIP_RS15040 | -2 | 14 | -4.488882 | lantibiotic-modifying protein |
| 17 | DIP_RS14450 | DIP_RS14405 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS14450 | 0 | 20 | -3.319813 | O-acetylhomoserine | |
| DIP_RS14445 | -2 | 27 | -4.268669 | hypothetical protein | |
| DIP_RS14440 | 0 | 22 | -2.874531 | hemin ABC transporter ATP-binding protein | |
| DIP_RS14435 | 1 | 21 | -3.292660 | iron ABC transporter permease | |
| DIP_RS14430 | 2 | 20 | -3.110022 | ABC transporter substrate-binding protein | |
| DIP_RS14425 | 1 | 22 | -3.142429 | hemin receptor | |
| DIP_RS14420 | 0 | 22 | -3.124765 | hypothetical protein | |
| DIP_RS14415 | 0 | 21 | -3.498625 | homoserine O-acetyltransferase | |
| DIP_RS14410 | 0 | 24 | -4.277419 | hypothetical protein | |
| DIP_RS14405 | -1 | 28 | -3.211605 | membrane protein |
| 18 | DIP_RS14280 | DIP_RS14240 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS14280 | -1 | 37 | 3.671593 | hypothetical protein | |
| DIP_RS14275 | -2 | 34 | 3.506905 | GMP synthetase | |
| DIP_RS14270 | -1 | 19 | 2.708842 | hypothetical protein | |
| DIP_RS14265 | 0 | 25 | 3.923775 | hypothetical protein | |
| DIP_RS14260 | 1 | 22 | 3.778653 | DMT transporter permease | |
| DIP_RS14255 | 1 | 21 | 4.043981 | membrane protein | |
| DIP_RS14250 | 2 | 20 | 3.902047 | MFS transporter | |
| DIP_RS14245 | 0 | 17 | 3.449091 | siderophore biosynthesis protein | |
| DIP_RS14240 | 0 | 17 | 3.158955 | iron-enterobactin transporter ATP-binding |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14240 | PF04183 | 183 | 5e-51 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| 19 | DIP_RS14185 | DIP_RS14125 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS14185 | 1 | 29 | 3.529893 | tRNA | |
| DIP_RS14180 | 1 | 26 | 3.423240 | ribosomal-protein-alanine N-acetyltransferase | |
| DIP_RS14175 | -1 | 14 | 2.682018 | tRNA threonylcarbamoyladenosine biosynthesis | |
| DIP_RS14170 | -3 | 17 | 2.508239 | hypothetical protein | |
| DIP_RS14165 | -3 | 18 | 2.453719 | transporter | |
| DIP_RS14160 | -3 | 15 | 2.510795 | tRNA threonylcarbamoyladenosine biosynthesis | |
| DIP_RS14155 | -1 | 16 | 1.492401 | alanine racemase | |
| DIP_RS14150 | 0 | 15 | 1.550056 | alpha/beta hydrolase | |
| DIP_RS14140 | 3 | 21 | 2.336483 | hypothetical protein | |
| DIP_RS14135 | 3 | 21 | 2.203423 | hypothetical protein | |
| DIP_RS14130 | 3 | 25 | 2.063523 | hypothetical protein | |
| DIP_RS14125 | 2 | 20 | 0.901267 | phosphoglucosamine mutase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14175 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14155 | PF05272 | 28 | 0.022 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14150 | ALARACEMASE | 284 | 7e-96 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14135 | PF03544 | 41 | 4e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 20 | DIP_RS13945 | DIP_RS13810 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS13945 | 0 | 20 | -3.045697 | 50S ribosomal protein L18 | |
| DIP_RS13940 | 0 | 22 | -2.047653 | 50S ribosomal protein L6 | |
| DIP_RS13935 | -1 | 25 | -1.349674 | 30S ribosomal protein S8 | |
| DIP_RS13930 | -2 | 30 | -0.376335 | hypothetical protein | |
| DIP_RS13925 | -1 | 35 | 0.813754 | hypothetical protein | |
| DIP_RS13920 | 1 | 43 | 3.216410 | glucosamine-6-phosphate deaminase | |
| DIP_RS13915 | 1 | 42 | 3.585319 | N-acetylglucosamine-6-phosphate deacetylase | |
| DIP_RS13910 | 0 | 38 | 3.101431 | N-acetylmannosamine-6-phosphate 2-epimerase | |
| DIP_RS13905 | 1 | 36 | 2.790626 | N-acetylglucosamine kinase | |
| DIP_RS13900 | 2 | 38 | 2.530146 | GntR family transcriptional regulator | |
| DIP_RS13895 | 1 | 32 | 1.838973 | ABC transporter substrate-binding protein | |
| DIP_RS13890 | 1 | 21 | 1.487752 | ABC transporter permease | |
| DIP_RS13885 | 1 | 19 | 1.165938 | ABC transporter | |
| DIP_RS13880 | 2 | 17 | 0.369303 | ABC transporter | |
| DIP_RS13875 | 5 | 20 | -0.604121 | dihydrodipicolinate synthase family protein | |
| DIP_RS13870 | 6 | 18 | -1.503503 | cyclic pyranopterin phosphate synthase MoaA | |
| DIP_RS13865 | 5 | 16 | -0.874589 | molybdopterin molybdenumtransferase MoeA | |
| DIP_RS13860 | 3 | 16 | -0.931783 | cyclic pyranopterin monophosphate synthase | |
| DIP_RS13855 | 2 | 16 | -0.902520 | molybdenum cofactor guanylyltransferase | |
| DIP_RS13850 | 2 | 17 | -0.962935 | molybdenum cofactor biosynthesis protein | |
| DIP_RS13845 | 2 | 18 | -0.999522 | nitrate/nitrite transporter integral membrane | |
| DIP_RS13840 | 2 | 22 | -1.365808 | MFS transporter | |
| DIP_RS13835 | 2 | 26 | -1.319074 | nitrate reductase subunit alpha | |
| DIP_RS13830 | 2 | 34 | -1.864487 | nitrate reductase subunit beta | |
| DIP_RS13825 | 3 | 37 | -1.460836 | nitrate reductase molybdenum cofactor assembly | |
| DIP_RS13820 | 4 | 30 | -1.262168 | nitrate reductase subunit gamma | |
| DIP_RS13815 | 3 | 19 | 0.407531 | molybdenum ABC transporter substrate-binding | |
| DIP_RS13810 | 2 | 12 | 1.125090 | molybdenum ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13915 | UREASE | 29 | 0.027 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13845 | TCRTETB | 47 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 21 | DIP_RS13345 | DIP_RS13210 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS13345 | 2 | 42 | 1.924112 | metal-transporting ATPase | |
| DIP_RS13340 | 2 | 43 | 2.504515 | hypothetical protein | |
| DIP_RS13335 | 1 | 31 | 3.146153 | delta-aminolevulinic acid dehydratase | |
| DIP_RS13330 | 0 | 30 | 3.418635 | bifunctional uroporphyrinogen-III | |
| DIP_RS13325 | 0 | 26 | 2.928418 | hydroxymethylbilane synthase | |
| DIP_RS13320 | -1 | 24 | 2.439934 | glutamyl-tRNA reductase | |
| DIP_RS13315 | -1 | 21 | 1.905079 | glutaredoxin | |
| DIP_RS13310 | -2 | 20 | 2.642584 | phosphoserine phosphatase | |
| DIP_RS13305 | -3 | 22 | 2.171915 | hypothetical protein | |
| DIP_RS13300 | -2 | 22 | 1.908886 | excisionase | |
| DIP_RS13295 | -3 | 21 | 2.260116 | pyrroline-5-carboxylate reductase | |
| DIP_RS13290 | -1 | 23 | 3.164151 | hypothetical protein | |
| DIP_RS13285 | 1 | 22 | 3.680635 | hypothetical protein | |
| DIP_RS13280 | 0 | 25 | 3.960571 | DNA-binding response regulator | |
| DIP_RS13275 | 0 | 24 | 3.657336 | histidine kinase | |
| DIP_RS13270 | 0 | 27 | 4.591525 | 2,3-bisphosphoglycerate-dependent | |
| DIP_RS13265 | 1 | 28 | 4.495523 | D-inositol-3-phosphate glycosyltransferase | |
| DIP_RS13260 | 0 | 28 | 4.268509 | long-chain-fatty-acid--CoA ligase | |
| DIP_RS13255 | -1 | 34 | 4.083579 | long-chain-fatty-acid--CoA ligase | |
| DIP_RS13250 | 0 | 30 | 3.312643 | hypothetical protein | |
| DIP_RS13245 | 0 | 32 | 3.636175 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
| DIP_RS13240 | 1 | 34 | 2.992926 | hypothetical protein | |
| DIP_RS13235 | 0 | 31 | 3.611583 | hypothetical protein | |
| DIP_RS13230 | 1 | 37 | 3.269487 | formate acetyltransferase | |
| DIP_RS13225 | -2 | 22 | 2.289110 | formate acetyltransferase | |
| DIP_RS13220 | -2 | 21 | 2.469712 | pyruvate formate-lyase 1-activating enzyme | |
| DIP_RS13215 | -2 | 22 | 2.814992 | hypothetical protein | |
| DIP_RS13210 | 0 | 29 | 3.284413 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13310 | RTXTOXINA | 29 | 0.027 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13305 | PRPHPHLPASEC | 28 | 0.032 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13280 | HTHFIS | 87 | 5e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13275 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13240 | THERMOLYSIN | 30 | 0.006 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| 22 | DIP_RS13110 | DIP_RS12145 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS13110 | 2 | 24 | 0.141380 | protease | |
| DIP_RS13105 | 2 | 23 | -0.673015 | alkylated DNA repair protein | |
| DIP_RS13100 | 2 | 23 | -3.078307 | hypothetical protein | |
| DIP_RS13095 | 0 | 24 | -5.328964 | hypothetical protein | |
| DIP_RS13090 | 0 | 31 | -5.785548 | hypothetical protein | |
| DIP_RS13085 | 0 | 30 | -4.477225 | DNA-binding protein | |
| DIP_RS13080 | 2 | 37 | -3.515556 | DNA-binding protein | |
| DIP_RS13075 | 3 | 55 | 2.676493 | hypothetical protein | |
| DIP_RS13070 | 3 | 29 | 3.454105 | integrase | |
| DIP_RS13065 | 2 | 33 | 4.407319 | integrase | |
| DIP_RS13060 | 2 | 37 | 5.628230 | hypothetical protein | |
| DIP_RS13055 | 2 | 40 | 5.573330 | *DNA polymerase III subunit delta' | |
| DIP_RS13045 | 2 | 34 | 5.933317 | adenylate cyclase | |
| DIP_RS13040 | -1 | 33 | 5.472156 | hypothetical protein | |
| DIP_RS13035 | -3 | 32 | 4.432939 | hypothetical protein | |
| DIP_RS13030 | -2 | 29 | 4.585042 | oligopeptide transporter, OPT family | |
| DIP_RS13025 | -2 | 28 | 4.398856 | hypothetical protein | |
| DIP_RS23025 | -1 | 25 | 4.252226 | DNA topoisomerase I | |
| DIP_RS13015 | -1 | 27 | 4.383184 | NAD-dependent dehydratase | |
| DIP_RS13010 | -1 | 24 | 3.968962 | membrane protein | |
| DIP_RS13005 | -1 | 27 | 5.812437 | ABC transporter substrate-binding protein | |
| DIP_RS13000 | -1 | 25 | 5.553417 | ABC transporter | |
| DIP_RS12995 | 2 | 20 | 5.307021 | ABC transporter ATP-binding protein | |
| DIP_RS12990 | 3 | 20 | 5.786858 | ABC transporter ATP-binding protein | |
| DIP_RS12985 | 3 | 20 | 5.898715 | cold-shock protein | |
| DIP_RS12975 | 6 | 21 | 5.262514 | DEAD/DEAH box helicase | |
| DIP_RS12970 | 6 | 27 | 4.162281 | hypothetical protein | |
| DIP_RS12965 | 5 | 24 | 4.613146 | hypothetical protein | |
| DIP_RS12960 | 3 | 22 | 3.999645 | hypothetical protein | |
| DIP_RS12955 | 2 | 20 | 4.362728 | hypothetical protein | |
| DIP_RS12950 | 0 | 17 | 3.864401 | hypothetical protein | |
| DIP_RS12945 | -1 | 18 | 4.467897 | general secretion pathway protein GspE | |
| DIP_RS12940 | -2 | 22 | 4.623353 | morphological differentiation | |
| DIP_RS12935 | -2 | 23 | 4.083513 | phosphoserine phosphatase | |
| DIP_RS12930 | -1 | 22 | 4.210233 | hypothetical protein | |
| DIP_RS12925 | 0 | 23 | 3.581173 | membrane protein | |
| DIP_RS12920 | 0 | 25 | 3.959919 | hydrolase | |
| DIP_RS12915 | -1 | 24 | 3.269903 | serine protease (mycosin) | |
| DIP_RS12910 | -1 | 21 | 3.073436 | coenzyme A pyrophosphatase | |
| DIP_RS12905 | -1 | 21 | 2.795267 | membrane protein | |
| DIP_RS12900 | -1 | 20 | 2.678635 | endonuclease III | |
| DIP_RS12895 | -1 | 29 | 4.191199 | Crp/Fnr family transcriptional regulator | |
| DIP_RS12890 | -2 | 26 | 4.098416 | MBL fold metallo-hydrolase | |
| DIP_RS12885 | 0 | 31 | 4.284591 | LysR family transcriptional regulator | |
| DIP_RS12880 | 0 | 27 | 3.074641 | hypothetical protein | |
| DIP_RS12875 | 0 | 35 | 4.009148 | WhiB family transcriptional regulator | |
| DIP_RS12870 | 2 | 23 | 3.232941 | penicillin-binding protein | |
| DIP_RS12865 | 2 | 21 | 2.463939 | hypothetical protein | |
| DIP_RS12860 | 3 | 22 | 2.724230 | metallophosphoesterase | |
| DIP_RS12850 | 3 | 27 | 2.392739 | *hypothetical protein | |
| DIP_RS12845 | 4 | 31 | 2.791272 | membrane protein | |
| DIP_RS12840 | 5 | 48 | 1.741083 | cation:proton antiporter | |
| DIP_RS12835 | 6 | 44 | 2.635728 | cation:proton antiporter | |
| DIP_RS12830 | 6 | 51 | 2.293478 | cation:proton antiporter | |
| DIP_RS12825 | 4 | 58 | -0.265202 | cation:proton antiporter | |
| DIP_RS12820 | 4 | 66 | 0.321402 | cation:proton antiporter | |
| DIP_RS12815 | 7 | 68 | 1.378645 | Na+/H+ antiporter subunit G | |
| DIP_RS12810 | 6 | 67 | 1.541638 | two-component sensor histidine kinase | |
| DIP_RS12805 | 5 | 43 | 2.298328 | DNA-binding response regulator | |
| DIP_RS12800 | 4 | 35 | 3.081893 | MFS transporter | |
| DIP_RS12795 | 3 | 30 | 4.621110 | ABC transporter | |
| DIP_RS12790 | 1 | 16 | 1.239169 | transporter | |
| DIP_RS12785 | 0 | 17 | 1.255037 | ABC transporter ATP-binding protein | |
| DIP_RS12780 | 1 | 20 | 1.595813 | catalase | |
| DIP_RS12775 | 0 | 16 | 1.445913 | RNA polymerase sigma factor SigC | |
| DIP_RS12770 | 0 | 21 | 2.167322 | aspartate-semialdehyde dehydrogenase | |
| DIP_RS12765 | -1 | 22 | 2.075389 | membrane protein | |
| DIP_RS12760 | -2 | 37 | 5.508457 | aspartate kinase | |
| DIP_RS12755 | -1 | 40 | 5.193433 | membrane protein | |
| DIP_RS12750 | 0 | 41 | 4.373681 | hypothetical protein | |
| DIP_RS12745 | 0 | 32 | 3.361402 | phosphomannomutase | |
| DIP_RS12740 | 0 | 25 | 1.514904 | 2-deoxyribose-5-phosphate aldolase | |
| DIP_RS12735 | 0 | 22 | 1.270984 | antibiotic MFS transporter | |
| DIP_RS12730 | 0 | 19 | 1.821708 | purine-nucleoside phosphorylase | |
| DIP_RS12725 | 0 | 22 | 3.462763 | hypothetical protein | |
| DIP_RS12720 | -2 | 23 | 4.296064 | DNA-directed RNA polymerase sigma-70 factor | |
| DIP_RS12715 | -2 | 26 | 4.873074 | 2-isopropylmalate synthase | |
| DIP_RS12710 | -1 | 27 | 5.939867 | NADPH-dependent oxidoreductase | |
| DIP_RS12705 | -2 | 28 | 7.060943 | DNA polymerase III subunit epsilon | |
| DIP_RS12700 | -3 | 30 | 7.380196 | UDP-N-acetylmuramyl peptide synthase | |
| DIP_RS12695 | -2 | 24 | 5.242283 | glutamine amidotransferase | |
| DIP_RS12690 | -2 | 24 | 4.702831 | recombination protein RecR | |
| DIP_RS12685 | -3 | 24 | 4.458361 | nucleoid-associated protein | |
| DIP_RS12680 | -3 | 25 | 5.676824 | DNA polymerase III subunit gamma/tau | |
| DIP_RS12675 | -2 | 26 | 5.058624 | hypothetical protein | |
| DIP_RS12670 | -3 | 27 | 5.304120 | aminotransferase | |
| DIP_RS12660 | -1 | 28 | 5.427914 | *hypothetical protein | |
| DIP_RS12655 | -2 | 25 | 4.771669 | gluconate kinase | |
| DIP_RS12650 | -2 | 28 | 5.418391 | gluconate permease | |
| DIP_RS12645 | -1 | 27 | 4.483052 | tRNA glutamyl-Q synthetase | |
| DIP_RS12640 | -1 | 24 | 3.850463 | tRNA-guanine(34) transglycosylase | |
| DIP_RS12635 | 0 | 25 | 2.906291 | multidrug RND transporter | |
| DIP_RS12630 | -1 | 21 | 2.017262 | excisionase | |
| DIP_RS12620 | 0 | 22 | 1.908249 | *tRNA-specific adenosine deaminase | |
| DIP_RS12615 | 0 | 26 | 1.617498 | hypothetical protein | |
| DIP_RS12610 | -1 | 32 | 1.541173 | prephenate dehydrogenase | |
| DIP_RS12605 | 1 | 22 | 0.258331 | hypothetical protein | |
| DIP_RS12600 | 1 | 25 | 2.263776 | hypothetical protein | |
| DIP_RS12595 | 2 | 27 | 3.197860 | transposase | |
| DIP_RS12590 | 3 | 31 | 3.565239 | hypothetical protein | |
| DIP_RS12585 | 2 | 29 | 2.703617 | hypothetical protein | |
| DIP_RS12580 | 2 | 32 | 3.610930 | surface-anchored fimbrial subunit | |
| DIP_RS12575 | 2 | 38 | 5.255665 | surface anchored protein | |
| DIP_RS12570 | 2 | 34 | 3.568698 | class C sortase | |
| DIP_RS12565 | 0 | 30 | 3.562456 | fimbrial protein | |
| DIP_RS12560 | -1 | 25 | 4.122314 | hypothetical protein | |
| DIP_RS12555 | 2 | 30 | 5.820089 | class C sortase | |
| DIP_RS12550 | 3 | 22 | 4.298715 | pyridoxal 5'-phosphate synthase subunit PdxT | |
| DIP_RS12545 | 2 | 26 | 4.693403 | pyridoxal biosynthesis lyase PdxS | |
| DIP_RS12540 | 1 | 22 | 0.593322 | GntR family transcriptional regulator | |
| DIP_RS12535 | 1 | 24 | -0.134635 | polysaccharide deacetylase | |
| DIP_RS12530 | 2 | 27 | -0.473353 | hypothetical protein | |
| DIP_RS12525 | 1 | 44 | -3.078583 | toxin | |
| DIP_RS12520 | 2 | 31 | -4.978478 | hypothetical protein | |
| DIP_RS12515 | 3 | 32 | -5.215524 | hypothetical protein | |
| DIP_RS12510 | 2 | 31 | -0.283920 | hypothetical protein | |
| DIP_RS12505 | 1 | 29 | -0.496269 | peptidoglycan-binding protein | |
| DIP_RS12500 | 1 | 27 | -0.964825 | hypothetical protein | |
| DIP_RS12495 | 1 | 27 | -1.356187 | phage tail fiber protein | |
| DIP_RS12485 | 3 | 25 | -1.056230 | hypothetical protein | |
| DIP_RS23020 | 4 | 24 | -0.929774 | hypothetical protein | |
| DIP_RS12475 | 5 | 25 | -1.261200 | hypothetical protein | |
| DIP_RS12470 | 5 | 23 | -1.297919 | hypothetical protein | |
| DIP_RS12465 | 5 | 22 | -1.261333 | hypothetical protein | |
| DIP_RS12460 | 6 | 21 | -0.918770 | hypothetical protein | |
| DIP_RS12455 | 2 | 26 | -1.664178 | phage tail protein | |
| DIP_RS12450 | 4 | 30 | -1.172638 | hypothetical protein | |
| DIP_RS12445 | 4 | 30 | -1.260376 | hypothetical protein | |
| DIP_RS12440 | 5 | 32 | -0.754360 | hypothetical protein | |
| DIP_RS12435 | 4 | 27 | -1.455123 | hypothetical protein | |
| DIP_RS12430 | 5 | 27 | -1.564816 | hypothetical protein | |
| DIP_RS12425 | 6 | 28 | -1.443535 | phage capsid protein | |
| DIP_RS12420 | 5 | 26 | -1.554745 | primosomal replication protein N | |
| DIP_RS12415 | 6 | 24 | -1.694605 | phage portal protein | |
| DIP_RS12410 | 5 | 24 | -0.969073 | hypothetical protein | |
| DIP_RS12400 | 6 | 27 | -1.036151 | hypothetical protein | |
| DIP_RS12385 | 7 | 30 | -1.393930 | hypothetical protein | |
| DIP_RS12380 | 4 | 33 | -1.850623 | hypothetical protein | |
| DIP_RS12375 | 4 | 32 | -4.276314 | hypothetical protein | |
| DIP_RS12370 | 3 | 32 | -3.224092 | hypothetical protein | |
| DIP_RS12365 | 4 | 34 | -2.339077 | hypothetical protein | |
| DIP_RS12360 | 5 | 33 | -1.047117 | antirepressor | |
| DIP_RS12355 | 3 | 28 | -0.506979 | hypothetical protein | |
| DIP_RS12350 | 3 | 29 | 1.241181 | hypothetical protein | |
| DIP_RS12345 | 4 | 34 | 1.169281 | transcriptional regulator | |
| DIP_RS12340 | 2 | 39 | 0.878493 | hypothetical protein | |
| DIP_RS12335 | 2 | 32 | -1.219929 | hypothetical protein | |
| DIP_RS12330 | -1 | 19 | -1.465172 | XRE family transcriptional regulator | |
| DIP_RS12325 | 0 | 19 | -1.588318 | integrase | |
| DIP_RS12320 | 1 | 18 | -0.587593 | *carboxylate transporter | |
| DIP_RS12315 | -1 | 19 | 0.550460 | hypothetical protein | |
| DIP_RS12310 | -1 | 28 | 1.827502 | **aminotransferase | |
| DIP_RS12300 | 0 | 29 | 4.398630 | *NADPH:quinone oxidoreductase | |
| DIP_RS12295 | 0 | 33 | 6.238770 | cysteine desulfurase | |
| DIP_RS12280 | -1 | 31 | 5.769923 | sugar ABC transporter permease | |
| DIP_RS12270 | -1 | 29 | 5.290111 | ABC transporter ATP-binding protein | |
| DIP_RS12265 | 1 | 29 | 4.487780 | iron ABC transporter substrate-binding protein | |
| DIP_RS12260 | 1 | 29 | 3.373288 | hypothetical protein | |
| DIP_RS12255 | -1 | 35 | 1.979155 | hypothetical protein | |
| DIP_RS12250 | 0 | 34 | 2.785385 | manganese ABC transporter ATP-binding protein | |
| DIP_RS12245 | 2 | 42 | 2.703219 | hypothetical protein | |
| DIP_RS12240 | 1 | 35 | 2.605644 | glycosyl transferase | |
| DIP_RS12235 | -1 | 26 | 3.316297 | hypothetical protein | |
| DIP_RS12230 | -1 | 25 | 4.084556 | hypothetical protein | |
| DIP_RS12225 | 0 | 28 | 5.254131 | hypothetical protein | |
| DIP_RS12220 | 0 | 26 | 4.257689 | hypothetical protein | |
| DIP_RS12215 | 0 | 35 | 4.785887 | hypothetical protein | |
| DIP_RS12210 | 1 | 27 | 4.090185 | decaprenylphosphoryl-beta-D-ribose oxidase | |
| DIP_RS12200 | 1 | 35 | 4.546683 | short-chain dehydrogenase | |
| DIP_RS12195 | 1 | 35 | 4.534725 | membrane protein | |
| DIP_RS12190 | 0 | 33 | 4.252741 | arabinosyltransferase | |
| DIP_RS12185 | 0 | 32 | 4.015910 | hypothetical protein | |
| DIP_RS12180 | 0 | 33 | 4.346204 | glycine/betaine ABC transporter permease | |
| DIP_RS12175 | -1 | 25 | 3.476119 | hypothetical protein | |
| DIP_RS12170 | -1 | 26 | 3.874073 | hypothetical protein | |
| DIP_RS12165 | -1 | 25 | 4.273692 | peptidase M13 | |
| DIP_RS12155 | -2 | 23 | 4.614496 | hypothetical protein | |
| DIP_RS12150 | -1 | 23 | 3.561208 | alpha/beta hydrolase | |
| DIP_RS12145 | -1 | 25 | 3.026920 | methylated-DNA--protein-cysteine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13105 | V8PROTEASE | 42 | 2e-06 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13100 | BORPETOXINA | 28 | 0.034 | Bordetella pertussis toxin A subunit signature. | |
>BORPETOXINA#Bordetella pertussis toxin A subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13010 | NUCEPIMERASE | 40 | 2e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12995 | TCRTETA | 56 | 7e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12945 | PF05272 | 32 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12915 | V8PROTEASE | 50 | 6e-09 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12805 | HTHFIS | 100 | 3e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12765 | TONBPROTEIN | 38 | 2e-04 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12760 | CARBMTKINASE | 32 | 0.005 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12735 | TCRTETB | 149 | 2e-42 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12680 | GPOSANCHOR | 41 | 2e-05 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12670 | BCTERIALGSPD | 32 | 0.006 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12635 | ACRIFLAVINRP | 53 | 6e-09 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12580 | PRTACTNFAMLY | 35 | 0.002 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12535 | PHPHTRNFRASE | 32 | 0.003 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12515 | DPTHRIATOXIN | 1114 | 0.0 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12460 | RTXTOXINA | 32 | 0.025 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12385 | ARGREPRESSOR | 27 | 0.030 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12250 | ADHESNFAMILY | 199 | 6e-64 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12230 | adhesinb | 215 | 2e-70 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12200 | TACYTOLYSIN | 26 | 0.014 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12190 | DHBDHDRGNASE | 50 | 2e-09 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS12150 | TCRTETB | 28 | 0.025 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 23 | DIP_RS22485 | DIP_RS22450 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS22485 | -2 | 29 | 3.182794 | membrane protein insertase YidC | |
| DIP_RS22475 | -3 | 26 | 3.828273 | class E sortase | |
| DIP_RS22465 | -1 | 26 | 3.232048 | antiporter | |
| DIP_RS22460 | 0 | 23 | 4.310296 | hypothetical protein | |
| DIP_RS22455 | 2 | 23 | 3.977466 | two-component sensor histidine kinase | |
| DIP_RS22450 | 2 | 23 | 3.573502 | DNA-binding response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22480 | 60KDINNERMP | 78 | 2e-17 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22465 | TCRTETB | 41 | 1e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22455 | TYPE3IMSPROT | 32 | 0.004 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS22450 | HTHFIS | 57 | 6e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 24 | DIP_RS20945 | DIP_RS20900 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS20945 | 2 | 29 | 4.850193 | acetyltransferase | |
| DIP_RS20940 | 1 | 22 | 3.530043 | sulfonamide-resistant dihydropteroate synthase | |
| DIP_RS20935 | 0 | 16 | 1.464965 | transposase | |
| DIP_RS20930 | -2 | 16 | 0.233664 | uracil-xanthine permease | |
| DIP_RS20925 | -1 | 16 | -0.470000 | TetR family transcriptional regulator | |
| DIP_RS20920 | -2 | 15 | -2.345143 | membrane protein | |
| DIP_RS20910 | -1 | 18 | -2.346561 | hypothetical protein | |
| DIP_RS20905 | -1 | 19 | -2.034164 | DNA-binding response regulator | |
| DIP_RS20900 | -2 | 17 | -0.416064 | two-component sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20940 | SACTRNSFRASE | 38 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20915 | HTHTETR | 46 | 2e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20910 | TCRTETB | 136 | 2e-37 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20895 | HTHFIS | 102 | 1e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS20890 | PF06580 | 38 | 6e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 25 | DIP_RS14040 | DIP_RS14015 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS14040 | -2 | 17 | -2.425983 | peptidase | |
| DIP_RS14035 | -3 | 14 | -1.253939 | sialidase | |
| DIP_RS14030 | -2 | 14 | -1.144631 | type I methionyl aminopeptidase | |
| DIP_RS14025 | -3 | 18 | 0.935060 | adenylate kinase | |
| DIP_RS14020 | -2 | 19 | 0.026999 | preprotein translocase subunit SecY | |
| DIP_RS14015 | -2 | 17 | -1.125095 | sugar ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14035 | RTXTOXINA | 32 | 0.002 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14030 | GPOSANCHOR | 45 | 6e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14015 | SECYTRNLCASE | 495 | e-177 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS14010 | PF05272 | 36 | 2e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 26 | DIP_RS13310 | DIP_RS13275 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS13310 | -2 | 20 | 2.642584 | phosphoserine phosphatase | |
| DIP_RS13305 | -3 | 22 | 2.171915 | hypothetical protein | |
| DIP_RS13300 | -2 | 22 | 1.908886 | excisionase | |
| DIP_RS13295 | -3 | 21 | 2.260116 | pyrroline-5-carboxylate reductase | |
| DIP_RS13290 | -1 | 23 | 3.164151 | hypothetical protein | |
| DIP_RS13285 | 1 | 22 | 3.680635 | hypothetical protein | |
| DIP_RS13280 | 0 | 25 | 3.960571 | DNA-binding response regulator | |
| DIP_RS13275 | 0 | 24 | 3.657336 | histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13310 | RTXTOXINA | 29 | 0.027 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13305 | PRPHPHLPASEC | 28 | 0.032 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13280 | HTHFIS | 87 | 5e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13275 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 27 | DIP_RS13150 | DIP_RS13105 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| DIP_RS13150 | -2 | 13 | 0.259527 | dTDP-glucose 4,6-dehydratase | |
| DIP_RS13145 | -2 | 12 | 0.173143 | dTDP-4-dehydrorhamnose reductase | |
| DIP_RS13140 | -1 | 13 | -0.395669 | glucose-1-phosphate thymidylyltransferase | |
| DIP_RS13135 | -1 | 12 | -0.494402 | hydrolase | |
| DIP_RS13130 | -1 | 12 | -0.298910 | acyl-CoA synthetase | |
| DIP_RS13125 | -1 | 10 | -1.066370 | alpha-amylase | |
| DIP_RS13120 | -1 | 20 | 0.854062 | hypothetical protein | |
| DIP_RS13115 | 1 | 21 | 0.836496 | plasmid replication protein | |
| DIP_RS13110 | 2 | 24 | 0.141380 | protease | |
| DIP_RS13105 | 2 | 23 | -0.673015 | alkylated DNA repair protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13150 | NUCEPIMERASE | 149 | 1e-44 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13145 | NUCEPIMERASE | 42 | 4e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13125 | INTIMIN | 35 | 0.006 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13110 | HTHTETR | 26 | 0.032 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13105 | V8PROTEASE | 42 | 2e-06 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| DIP_RS13100 | BORPETOXINA | 28 | 0.034 | Bordetella pertussis toxin A subunit signature. | |
>BORPETOXINA#Bordetella pertussis toxin A subunit signature. | |||||