S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
1 | NH44784_000031 | NH44784_000631 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_000031 | 0 | 39 | -4.605848 | phage-related hypothetical protein | |
NH44784_000041 | 1 | 40 | -6.243428 | phage-related hypothetical protein | |
NH44784_000051 | 0 | 37 | -6.701962 | Phage protein | |
NH44784_000061 | 1 | 36 | -6.993374 | hypothetical protein | |
NH44784_000071 | 2 | 34 | -6.814985 | hypothetical protein | |
NH44784_000081 | 3 | 33 | -6.525888 | hypothetical protein | |
NH44784_000091 | 4 | 23 | -4.916425 | IS, phage, Tn; Transposon-related functions | |
NH44784_000101 | 3 | 22 | -3.945550 | hypothetical protein | |
NH44784_000111 | 1 | 22 | -4.468529 | hypothetical protein | |
NH44784_000121 | 2 | 23 | -4.625271 | putative baseplate protein | |
NH44784_000131 | 2 | 23 | -4.816273 | hypothetical protein | |
NH44784_000141 | 3 | 23 | -5.083546 | hypothetical protein | |
NH44784_000151 | 1 | 18 | -4.278407 | hypothetical protein | |
NH44784_000161 | 1 | 17 | -3.893583 | hypothetical protein | |
NH44784_000171 | 3 | 15 | -2.575449 | hypothetical protein | |
NH44784_000181 | 2 | 16 | -2.803872 | hypothetical protein | |
NH44784_000191 | 4 | 18 | -2.540673 | hypothetical protein | |
NH44784_000201 | 3 | 16 | -2.515348 | FIG00456185: hypothetical protein | |
NH44784_000211 | 3 | 17 | -3.377696 | Phage protein | |
NH44784_000221 | 3 | 14 | -3.249923 | hypothetical protein | |
NH44784_000231 | 5 | 15 | -3.031583 | hypothetical protein | |
NH44784_000241 | 3 | 15 | -2.411686 | hypothetical protein | |
NH44784_000251 | 4 | 15 | -2.825514 | Phage protein | |
NH44784_000261 | 3 | 15 | -2.234197 | FIG00925362: hypothetical protein | |
NH44784_000271 | 3 | 16 | -1.744121 | hypothetical protein | |
NH44784_000281 | 3 | 16 | -2.122194 | hypothetical protein | |
NH44784_000291 | 3 | 17 | -2.462800 | Phage protein | |
NH44784_000301 | 3 | 15 | -2.400553 | Phage protein | |
NH44784_000311 | 1 | 18 | -0.896037 | Phage terminase, large subunit | |
NH44784_000321 | -1 | 23 | -0.998174 | putative phage-related protein | |
NH44784_000331 | -2 | 21 | -1.020867 | hypothetical protein | |
NH44784_000341 | -1 | 18 | 0.010107 | phage-related hypothetical protein | |
NH44784_000351 | -1 | 13 | 1.708456 | phage-related hypothetical protein | |
NH44784_000361 | 1 | 15 | 0.427343 | hypothetical protein | |
NH44784_000371 | 1 | 16 | -0.581378 | hypothetical protein | |
NH44784_000381 | 2 | 17 | -0.689212 | hypothetical protein | |
NH44784_000391 | 2 | 18 | -0.943863 | hypothetical protein | |
NH44784_000401 | 2 | 17 | -1.461636 | hypothetical protein | |
NH44784_000411 | 3 | 21 | -3.119428 | hypothetical protein | |
NH44784_000421 | 2 | 19 | -2.361227 | hypothetical protein | |
NH44784_000431 | 2 | 20 | -1.366606 | hypothetical protein | |
NH44784_000441 | 2 | 20 | -1.770376 | hypothetical protein | |
NH44784_000451 | 4 | 19 | -0.764648 | phage-related hypothetical protein | |
NH44784_000461 | 2 | 17 | -1.897721 | hypothetical protein | |
NH44784_000471 | 1 | 17 | -1.638676 | hypothetical protein | |
NH44784_000481 | 1 | 16 | -0.149428 | hypothetical protein | |
NH44784_000491 | 4 | 16 | -1.146694 | hypothetical protein | |
NH44784_000501 | 3 | 16 | -1.040667 | hypothetical protein | |
NH44784_000511 | 6 | 16 | -1.162935 | hypothetical protein | |
NH44784_000521 | 7 | 17 | -0.291501 | hypothetical protein | |
NH44784_000531 | 6 | 13 | -0.896191 | TolA protein | |
NH44784_000541 | 5 | 14 | -2.227948 | Phage related protein | |
NH44784_000551 | 3 | 13 | -2.147932 | phage related protein | |
NH44784_000561 | 3 | 17 | -2.734638 | phage-related hypothetical protein | |
NH44784_000571 | 1 | 21 | -2.790364 | hypothetical protein | |
NH44784_000581 | 1 | 25 | -3.700905 | hypothetical protein | |
NH44784_000591 | 0 | 27 | -4.128726 | methyltransferase, putative | |
NH44784_000601 | 1 | 31 | -5.007987 | hypothetical protein | |
NH44784_000611 | 0 | 29 | -4.464106 | phage-related hypothetical protein | |
NH44784_000621 | 1 | 20 | -3.786841 | FIG00434035: hypothetical protein | |
NH44784_000631 | 0 | 16 | -3.215529 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_000511 | PF04619 | 28 | 0.018 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_000531 | IGASERPTASE | 50 | 7e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
2 | NH44784_001311 | NH44784_001531 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_001311 | 2 | 11 | 0.895897 | *hypothetical protein | |
NH44784_001331 | 0 | 9 | 0.827832 | *GNAT family acetyltransferase YjcF | |
NH44784_001341 | 1 | 10 | 0.681058 | Permease of the drug/metabolite transporter | |
NH44784_001351 | -1 | 9 | 0.437331 | hypothetical protein | |
NH44784_001361 | -2 | 8 | 0.065546 | hypothetical protein | |
NH44784_001371 | -1 | 9 | -0.151558 | Ferredoxin-dependent glutamate synthase | |
NH44784_001381 | 1 | 13 | 0.217867 | Cardiolipin synthetase | |
NH44784_001391 | 2 | 15 | -0.004835 | hypothetical protein | |
NH44784_001401 | 3 | 16 | -0.342012 | ABC transporter ATP-binding protein | |
NH44784_001411 | 5 | 20 | -1.508260 | FIG00433932: hypothetical protein | |
NH44784_001431 | 2 | 23 | -1.758589 | *hypothetical protein | |
NH44784_001441 | 1 | 26 | -2.219674 | hypothetical protein | |
NH44784_001451 | 1 | 25 | -2.617425 | hypothetical protein | |
NH44784_001461 | 0 | 25 | -2.790047 | hypothetical protein | |
NH44784_001471 | 0 | 21 | -2.213727 | Permease of the drug/metabolite transporter | |
NH44784_001481 | 0 | 18 | -0.618832 | diguanylate cyclase/phosphodiesterase (GGDEF & | |
NH44784_001491 | 1 | 18 | -0.550698 | phage-related hypothetical protein | |
NH44784_001501 | 1 | 16 | -0.634526 | phage-related putative membrane protein | |
NH44784_001511 | 3 | 12 | -0.742056 | Phage tail fiber protein | |
NH44784_001521 | 3 | 11 | -0.128548 | Putative bacteriophage protein | |
NH44784_001531 | 2 | 13 | -0.393362 | putative bacteriophage protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_001431 | TCRTETB | 29 | 0.035 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_001441 | PF05616 | 24 | 0.018 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein |
3 | NH44784_002291 | NH44784_002601 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_002291 | 2 | 17 | -1.492623 | RecA protein | |
NH44784_002301 | -1 | 10 | -1.237166 | two-component response regulatory protein | |
NH44784_002311 | -1 | 9 | -1.972236 | Sensor protein basS/pmrB | |
NH44784_002321 | -1 | 8 | -3.423864 | Permeases of the major facilitator superfamily | |
NH44784_002331 | -1 | 9 | -3.037441 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_002341 | -1 | 9 | -2.939181 | DNA recombination-dependent growth factor C | |
NH44784_002351 | -3 | 12 | -3.034673 | Putative Heme-regulated two-component response | |
NH44784_002361 | 0 | 17 | -3.470565 | Aspartate carbamoyltransferase | |
NH44784_002371 | 5 | 26 | -2.291824 | hypothetical protein | |
NH44784_002381 | 3 | 18 | 0.818201 | putative integral membrane protein | |
NH44784_002391 | 3 | 22 | 0.002548 | putative lipoprotein | |
NH44784_002401 | 6 | 27 | 0.348231 | entericidin A anti-toxin precursor | |
NH44784_002411 | 7 | 29 | 0.851409 | hypothetical protein | |
NH44784_002421 | 5 | 23 | 1.037526 | hypothetical protein | |
NH44784_002431 | 4 | 20 | 0.817103 | NAD(FAD)-utilizing dehydrogenases | |
NH44784_002441 | 5 | 19 | -0.298809 | hypothetical protein | |
NH44784_002451 | 3 | 18 | -0.252097 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_002471 | 2 | 18 | 0.289243 | *hypothetical protein | |
NH44784_002481 | -1 | 16 | -0.060360 | Transcriptional regulator, GntR family domain / | |
NH44784_002491 | 2 | 18 | -0.856918 | DedA | |
NH44784_002501 | 0 | 16 | 0.420023 | hypothetical protein | |
NH44784_002511 | 0 | 12 | -0.062640 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_002521 | 0 | 9 | -0.474850 | hypothetical protein | |
NH44784_002531 | 0 | 9 | -0.962781 | Transcriptional regulator, AsnC family | |
NH44784_002541 | -1 | 12 | -1.284609 | hypothetical protein | |
NH44784_002551 | -1 | 12 | -1.609285 | 4-hydroxythreonine-4-phosphate dehydrogenase | |
NH44784_002561 | 2 | 11 | -2.812953 | hypothetical protein | |
NH44784_002571 | 3 | 15 | -3.589814 | Replicative DNA helicase | |
NH44784_002581 | 4 | 14 | -3.917933 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_002591 | 3 | 14 | -4.181929 | LSU ribosomal protein L9p | |
NH44784_002601 | 1 | 11 | -4.164249 | SSU ribosomal protein S18p |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002301 | HTHFIS | 93 | 5e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002311 | PF06580 | 41 | 5e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002321 | TCRTETA | 41 | 1e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
4 | NH44784_002921 | NH44784_003011 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_002921 | 2 | 14 | -1.081243 | transcriptional regulator, LysR-family | |
NH44784_002931 | 3 | 16 | -2.302882 | FIG00973797: hypothetical protein | |
NH44784_002941 | 5 | 16 | -2.734435 | GTP-binding protein TypA/BipA | |
NH44784_002951 | 4 | 16 | -1.426023 | tRNA pseudouridine synthase B | |
NH44784_002961 | 5 | 17 | -1.426023 | Ribosome-binding factor A | |
NH44784_002971 | 4 | 16 | -1.470305 | Translation initiation factor 2 | |
NH44784_002981 | 4 | 21 | -2.427884 | Transcription termination protein NusA | |
NH44784_002991 | 4 | 26 | -1.631422 | COG0779: clustered with transcription | |
NH44784_003001 | 3 | 24 | -1.065117 | Ribosomal large subunit pseudouridine synthase | |
NH44784_003011 | 2 | 23 | -1.640287 | Segregation and condensation protein B |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002931 | MICOLLPTASE | 31 | 0.001 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002941 | TCRTETOQM | 168 | 5e-47 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002971 | TCRTETOQM | 77 | 2e-16 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_003001 | cloacin | 32 | 0.009 | Cloacin signature. | |
>cloacin#Cloacin signature. |
5 | NH44784_004431 | NH44784_004491 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_004431 | 1 | 14 | -3.415271 | Probable transmembrane protein | |
NH44784_004441 | 1 | 14 | -3.893815 | hypothetical protein | |
NH44784_004451 | 1 | 19 | -4.844827 | Citrate synthase (si | |
NH44784_004461 | 0 | 17 | -4.028698 | YgfY COG2938 | |
NH44784_004471 | 1 | 19 | -3.711050 | Succinate dehydrogenase iron-sulfur protein | |
NH44784_004481 | 1 | 21 | -2.898036 | Succinate dehydrogenase flavoprotein subunit | |
NH44784_004491 | 0 | 20 | -3.016437 | Succinate dehydrogenase hydrophobic membrane |
6 | NH44784_005741 | NH44784_005811 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_005741 | 2 | 14 | -2.510286 | Transmembrane component BioN of energizing | |
NH44784_005751 | 2 | 12 | -1.721944 | ATPase component BioM of energizing module of | |
NH44784_005761 | 1 | 14 | -1.193870 | Peptide methionine sulfoxide reductase MsrB | |
NH44784_005771 | 4 | 14 | 0.079275 | Intracellular septation protein IspA | |
NH44784_005781 | 4 | 13 | 0.341750 | Cell division protein BolA | |
NH44784_005791 | 2 | 14 | 0.262025 | Peptidyl-prolyl cis-trans isomerase | |
NH44784_005801 | 1 | 10 | 1.273390 | DNA ligase | |
NH44784_005811 | 2 | 10 | 1.850224 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_005791 | SOPEPROTEIN | 28 | 0.038 | Salmonella type III secretion SopE effector protein ... | |
>SOPEPROTEIN#Salmonella type III secretion SopE effector protein |
7 | NH44784_005951 | NH44784_006151 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_005951 | 1 | 10 | -3.132300 | Phosphoserine phosphatase | |
NH44784_005961 | 2 | 12 | -3.711959 | Ferrichrome-iron receptor | |
NH44784_005971 | 3 | 16 | -4.107818 | hypothetical protein | |
NH44784_005981 | 3 | 17 | -3.500449 | Probable transmembrane protein | |
NH44784_005991 | 2 | 18 | -3.634859 | NADH-ubiquinone oxidoreductase chain N | |
NH44784_006001 | 2 | 17 | -4.477318 | NADH-ubiquinone oxidoreductase chain M | |
NH44784_006011 | 0 | 18 | -2.471320 | NADH-ubiquinone oxidoreductase chain L | |
NH44784_006021 | 0 | 19 | -2.230011 | NADH-ubiquinone oxidoreductase chain K | |
NH44784_006031 | -1 | 19 | -2.269115 | NADH-ubiquinone oxidoreductase chain J | |
NH44784_006041 | 0 | 20 | -2.781037 | NADH-ubiquinone oxidoreductase chain I | |
NH44784_006051 | 0 | 20 | -2.545061 | NADH-ubiquinone oxidoreductase chain H | |
NH44784_006061 | 0 | 20 | -2.234937 | NADH-ubiquinone oxidoreductase chain G | |
NH44784_006071 | 1 | 19 | -4.523755 | NADH-ubiquinone oxidoreductase chain F | |
NH44784_006081 | 5 | 22 | -5.489950 | NADH-ubiquinone oxidoreductase chain E | |
NH44784_006091 | 4 | 21 | -4.870468 | NADH-ubiquinone oxidoreductase chain D | |
NH44784_006101 | 4 | 20 | -4.027649 | NADH-ubiquinone oxidoreductase chain C | |
NH44784_006111 | 3 | 18 | -3.141289 | NADH-ubiquinone oxidoreductase chain B | |
NH44784_006121 | 2 | 18 | -1.557984 | NADH ubiquinone oxidoreductase chain A | |
NH44784_006131 | -1 | 15 | -0.089877 | outer membrane porin | |
NH44784_006141 | -1 | 11 | 2.383500 | Transcriptional regulator, TetR family | |
NH44784_006151 | -2 | 8 | 3.003278 | FIG00431876: hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006101 | PF04183 | 28 | 0.045 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006121 | HOKGEFTOXIC | 25 | 0.037 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006131 | ECOLNEIPORIN | 101 | 2e-26 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006141 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
8 | NH44784_006821 | NH44784_006871 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_006821 | 0 | 12 | -3.084039 | Nitroreductase family protein | |
NH44784_006831 | 0 | 18 | -3.480562 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_006841 | 2 | 20 | -4.668032 | hypothetical protein | |
NH44784_006851 | 3 | 20 | -4.203801 | Putative phosphatase | |
NH44784_006861 | 2 | 27 | -4.345462 | hypothetical protein | |
NH44784_006871 | 1 | 20 | -3.006483 | hypothetical protein |
9 | NH44784_007011 | NH44784_007471 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_007011 | 2 | 20 | 0.550912 | hypothetical protein | |
NH44784_007021 | 1 | 38 | -5.545874 | hypothetical protein | |
NH44784_007031 | 3 | 46 | -7.987384 | hypothetical protein | |
NH44784_007041 | 3 | 53 | -9.748936 | phage-related hypothetical protein | |
NH44784_007051 | 4 | 54 | -9.681765 | hypothetical protein | |
NH44784_007061 | 4 | 53 | -9.451072 | hypothetical protein | |
NH44784_007071 | 4 | 53 | -9.498033 | hypothetical protein | |
NH44784_007081 | 4 | 47 | -8.717379 | hypothetical protein | |
NH44784_007091 | 4 | 43 | -7.873799 | hypothetical protein | |
NH44784_007101 | 4 | 34 | -6.380204 | phage tape measure protein | |
NH44784_007111 | 4 | 25 | -5.653236 | hypothetical protein | |
NH44784_007121 | 3 | 25 | -5.970429 | hypothetical protein | |
NH44784_007131 | 3 | 28 | -7.114704 | hypothetical protein | |
NH44784_007141 | 3 | 31 | -7.302911 | hypothetical protein | |
NH44784_007151 | 3 | 32 | -7.845963 | gp7 | |
NH44784_007161 | 5 | 34 | -7.635748 | FIG01047095: hypothetical protein | |
NH44784_007171 | 4 | 32 | -7.447529 | gp5 | |
NH44784_007181 | 3 | 33 | -7.422673 | Phage terminase large subunit | |
NH44784_007191 | 4 | 30 | -6.245300 | Phage terminase, small subunit | |
NH44784_007201 | 4 | 30 | -6.148246 | Putative phage endonuclease | |
NH44784_007211 | 4 | 30 | -5.657457 | DNA replication protein DnaC | |
NH44784_007221 | 2 | 32 | -6.326400 | phage recombination protein | |
NH44784_007231 | 5 | 32 | -7.575364 | hypothetical protein | |
NH44784_007241 | 2 | 34 | -6.788799 | phage-related transcriptional transcriptional | |
NH44784_007251 | 3 | 32 | -6.829983 | hypothetical protein | |
NH44784_007261 | 4 | 34 | -7.482079 | putative phage repressor protein | |
NH44784_007271 | 7 | 29 | -8.630324 | hypothetical protein | |
NH44784_007281 | 6 | 26 | -7.346861 | hypothetical protein | |
NH44784_007291 | 5 | 24 | -6.271552 | hypothetical protein | |
NH44784_007301 | 6 | 24 | -6.772239 | hypothetical protein | |
NH44784_007311 | 6 | 23 | -6.103842 | hypothetical protein | |
NH44784_007321 | 4 | 24 | -6.452680 | putative bacteriophage protein | |
NH44784_007331 | 1 | 24 | -4.859859 | Single-stranded DNA-binding protein | |
NH44784_007341 | 1 | 24 | -4.813907 | hypothetical protein | |
NH44784_007351 | -1 | 24 | -4.273348 | hypothetical protein | |
NH44784_007361 | -1 | 25 | -4.205966 | hypothetical protein | |
NH44784_007371 | 0 | 26 | -4.092690 | Retron-type reverse transcriptase | |
NH44784_007381 | 0 | 17 | -0.846578 | hypothetical protein | |
NH44784_007391 | 1 | 14 | -0.338779 | hypothetical protein | |
NH44784_007401 | -1 | 12 | -0.355464 | FIG00434035: hypothetical protein | |
NH44784_007411 | 0 | 15 | -0.838479 | hypothetical protein | |
NH44784_007421 | 0 | 14 | -1.252813 | hypothetical protein | |
NH44784_007431 | 0 | 15 | -1.156191 | FIG00432251: hypothetical protein | |
NH44784_007441 | 0 | 14 | -1.955404 | Threonine dehydratase | |
NH44784_007451 | 2 | 20 | -2.743257 | putative lipoprotein | |
NH44784_007461 | 3 | 22 | -3.242814 | Polyribonucleotide nucleotidyltransferase | |
NH44784_007471 | 1 | 16 | -3.744319 | SSU ribosomal protein S15p (S13e |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_007101 | PYOCINKILLER | 32 | 0.009 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_007111 | INTIMIN | 34 | 0.001 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_007181 | OUTRSURFACE | 28 | 0.044 | Outer surface protein signature. | |
>OUTRSURFACE#Outer surface protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_007251 | INVEPROTEIN | 24 | 0.040 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_007451 | PF07520 | 29 | 0.021 | Virulence protein SrfB | |
>PF07520#Virulence protein SrfB |
10 | NH44784_008041 | NH44784_010941 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_008041 | -2 | 13 | -3.318821 | Dihydrodipicolinate synthase | |
NH44784_008051 | -2 | 15 | -4.046111 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_008061 | -1 | 15 | -4.773304 | hypothetical protein | |
NH44784_008071 | -2 | 14 | -5.043936 | hypothetical protein | |
NH44784_008081 | -1 | 10 | -3.413248 | hypothetical protein | |
NH44784_008091 | 1 | 14 | -3.339145 | Isocitrate dehydrogenase [NADP] | |
NH44784_008101 | -1 | 13 | -2.120468 | FIG00433688: hypothetical protein | |
NH44784_008111 | -1 | 13 | -2.170308 | putative cytochrome | |
NH44784_008121 | 0 | 12 | -2.074241 | putative cytochrome | |
NH44784_008131 | 0 | 12 | -1.706791 | ATPase associated with various cellular | |
NH44784_008141 | 1 | 13 | -1.664119 | hypothetical protein | |
NH44784_008151 | 1 | 13 | -1.665831 | Phosphinothricin N-acetyltransferase | |
NH44784_008161 | 3 | 14 | -2.550087 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_008171 | 4 | 14 | -2.542250 | acetyltransferase, GNAT family | |
NH44784_008181 | 4 | 16 | -2.590936 | putative zinc protease | |
NH44784_008191 | 6 | 14 | -2.924395 | hypothetical protein | |
NH44784_008201 | 5 | 11 | -2.941175 | Chaperone protein DnaJ | |
NH44784_008211 | 4 | 10 | -3.517527 | Chaperone protein DnaK | |
NH44784_008221 | -1 | 11 | -2.303824 | putative thioredoxin | |
NH44784_008231 | -1 | 10 | -0.638340 | Heat shock protein GrpE | |
NH44784_008241 | -1 | 11 | -1.352602 | hypothetical protein | |
NH44784_008251 | -1 | 12 | -1.269529 | Ferrochelatase, protoheme ferro-lyase | |
NH44784_008261 | 0 | 15 | -0.706201 | Heat-inducible transcription repressor HrcA | |
NH44784_008271 | -2 | 12 | 0.615951 | NAD kinase | |
NH44784_008281 | 0 | 13 | -1.663103 | DNA repair protein RecN | |
NH44784_008291 | 2 | 21 | -4.761150 | Ferric uptake regulation protein FUR | |
NH44784_008301 | 3 | 29 | -6.284020 | Outer membrane lipoprotein SmpA, a component of | |
NH44784_008311 | 2 | 36 | -7.320415 | Dihydrodipicolinate reductase | |
NH44784_008321 | 4 | 45 | -8.313178 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
NH44784_008341 | 5 | 51 | -10.259469 | *Integrase | |
NH44784_008351 | 3 | 54 | -11.507214 | Transcriptional regulator, LysR family | |
NH44784_008361 | 3 | 52 | -10.911118 | Inner membrane component of tripartite multidrug | |
NH44784_008371 | 1 | 48 | -9.251227 | Membrane fusion component of tripartite | |
NH44784_008381 | 1 | 45 | -8.820276 | Outer membrane component of tripartite multidrug | |
NH44784_008391 | 1 | 41 | -8.657944 | Glucoamylase | |
NH44784_008401 | 0 | 34 | -7.513516 | Cytochrome O ubiquinol oxidase subunit I | |
NH44784_008411 | 1 | 32 | -5.586974 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_008421 | 1 | 24 | -4.377412 | Pyruvate/2-oxoglutarate dehydrogenase | |
NH44784_008431 | 2 | 22 | -4.306229 | hypothetical protein | |
NH44784_008441 | 3 | 21 | -3.779640 | FIG01210837: hypothetical protein | |
NH44784_008451 | 2 | 23 | -3.229945 | hypothetical protein | |
NH44784_008461 | 2 | 21 | -1.875636 | hypothetical protein | |
NH44784_008471 | 3 | 20 | -1.854158 | FIG00460544: hypothetical protein | |
NH44784_008481 | 3 | 21 | -1.669000 | hypothetical protein | |
NH44784_008491 | 2 | 20 | -1.017675 | hypothetical protein | |
NH44784_008501 | 2 | 21 | -1.281910 | Protein-disulfide isomerase | |
NH44784_008511 | 2 | 22 | -1.192719 | Type IV secretory pathway, VirB4 components | |
NH44784_008521 | 2 | 21 | -0.712888 | putative lipoprotein | |
NH44784_008531 | 2 | 21 | -0.870870 | hypothetical protein | |
NH44784_008541 | 4 | 21 | 0.013296 | corresponds to STY4569 from Accession AL513382: | |
NH44784_008551 | 5 | 22 | -1.772524 | Possible exported protein | |
NH44784_008561 | 2 | 20 | -2.467690 | FIG00453933: hypothetical protein | |
NH44784_008571 | 2 | 18 | -2.555560 | FIG00455763: hypothetical protein | |
NH44784_008581 | 2 | 19 | -1.681362 | FIG00953352: hypothetical protein | |
NH44784_008591 | 2 | 19 | -0.863523 | Candidate type III effector Hop protein | |
NH44784_008601 | 1 | 20 | -0.795606 | hypothetical protein | |
NH44784_008611 | 1 | 21 | -0.499512 | Type IV secretory pathway, VirD4 components | |
NH44784_008621 | 0 | 23 | 0.897102 | FIG00460984: hypothetical protein | |
NH44784_008631 | 1 | 20 | -1.364219 | FIG016425: Soluble lytic murein transglycosylase | |
NH44784_008641 | 0 | 21 | -2.222750 | probable exported protein STY4558 | |
NH44784_008651 | 1 | 22 | -3.575799 | FIG00978796: hypothetical protein | |
NH44784_008661 | 2 | 22 | -4.003125 | hypothetical protein | |
NH44784_008671 | 2 | 20 | -3.985475 | hypothetical protein | |
NH44784_008681 | 2 | 20 | -4.022642 | Superfamily II DNA/RNA helicases, SNF2 family | |
NH44784_008691 | 3 | 23 | -3.945403 | FIG00957490: hypothetical protein | |
NH44784_008701 | 3 | 26 | -3.802388 | FIG00954465: hypothetical protein | |
NH44784_008711 | 3 | 25 | -3.091254 | FIG023873: Plasmid related protein | |
NH44784_008721 | 4 | 25 | -2.594535 | FIG026997: Hypothetical protein | |
NH44784_008731 | 4 | 26 | -2.881184 | FIG041301: Hypothetical protein | |
NH44784_008741 | 4 | 24 | -2.817278 | FIG046709: Hypothetical protein | |
NH44784_008751 | 4 | 22 | -3.164897 | FIG036757: Plasmid-related protein | |
NH44784_008761 | 4 | 22 | -3.474881 | FIG034376: Hypothetical protein | |
NH44784_008771 | 4 | 22 | -4.018616 | FIG049434: Periplasmic protein TonB, links inner | |
NH44784_008781 | 3 | 22 | -4.812833 | FIG076210: Hypothetical protein | |
NH44784_008791 | 3 | 21 | -4.849087 | FIG076676: Hypothetical protein | |
NH44784_008801 | 1 | 21 | -3.468252 | hypothetical protein | |
NH44784_008811 | 2 | 21 | -3.301925 | FIG00902157: hypothetical protein | |
NH44784_008821 | 1 | 24 | -1.538509 | hypothetical protein | |
NH44784_008831 | 0 | 22 | -1.286065 | hypothetical protein | |
NH44784_008841 | 0 | 23 | -1.514617 | FIG01213233: hypothetical protein | |
NH44784_008851 | 0 | 24 | -1.470616 | DNA methyltransferase | |
NH44784_008861 | 1 | 24 | -1.623392 | hypothetical protein | |
NH44784_008871 | 1 | 25 | -1.868815 | hypothetical protein | |
NH44784_008881 | 2 | 22 | -2.628033 | DNA topoisomerase III | |
NH44784_008891 | 2 | 22 | -2.138521 | Single-stranded DNA-binding protein in | |
NH44784_008901 | 3 | 22 | -1.785951 | Integrase regulator R | |
NH44784_008911 | 2 | 21 | -1.295158 | FIG141694: hypothetical protein in PFGI-1-like | |
NH44784_008921 | 1 | 23 | -1.698047 | FIG141751: hypothetical protein in PFGI-1-like | |
NH44784_008931 | 0 | 23 | -2.615632 | FIG004780: hypothetical protein in PFGI-1-like | |
NH44784_008941 | -1 | 23 | -2.188473 | Protein with ParB-like nuclease domain in | |
NH44784_008951 | -2 | 26 | -3.086050 | FIG034647: hypothetical protein in PFGI-1-like | |
NH44784_008961 | -2 | 21 | -1.857058 | Chromosome partitioning ATPase in PFGI-1-like | |
NH44784_008971 | -2 | 20 | -2.907505 | Transcriptional regulator in PFGI-1-like | |
NH44784_008981 | -1 | 22 | -3.605860 | FIG041388: hypothetical protein in PFGI-1-like | |
NH44784_008991 | 0 | 17 | -1.909115 | NAD(P)H dehydrogenase (quinone | |
NH44784_009001 | 1 | 17 | -2.095734 | Histone acetyltransferase HPA2 and related | |
NH44784_009011 | 1 | 18 | -2.243085 | Transcriptional regulator, GntR family domain / | |
NH44784_009021 | 3 | 21 | -3.269788 | 4-carboxymuconolactone decarboxylase | |
NH44784_009041 | 3 | 22 | -3.284214 | *Integrase | |
NH44784_009051 | 1 | 23 | -2.526464 | Transposase | |
NH44784_009061 | 3 | 26 | -4.137347 | ISPsy4, transposition helper protein | |
NH44784_009071 | 3 | 34 | -5.336927 | Heavy metal RND efflux outer membrane | |
NH44784_009081 | 3 | 35 | -6.614223 | putative transposase | |
NH44784_009091 | 0 | 37 | -6.967297 | IS1480 transposase | |
NH44784_009101 | -1 | 35 | -6.634357 | Transposase | |
NH44784_009111 | 1 | 33 | -5.656793 | transposase subfamily | |
NH44784_009121 | 1 | 35 | -5.619711 | LysR family transcriptional regulator YnfL | |
NH44784_009131 | 1 | 32 | -4.837537 | hypothetical protein | |
NH44784_009141 | 0 | 30 | -4.452531 | Copper resistance protein D | |
NH44784_009151 | 3 | 23 | -3.922902 | Copper resistance protein C precursor | |
NH44784_009161 | 3 | 26 | -4.199573 | Lead, cadmium, zinc and mercury transporting | |
NH44784_009171 | 1 | 33 | -6.343731 | Asl7591 protein | |
NH44784_009181 | 1 | 31 | -6.154840 | CopG protein | |
NH44784_009191 | 1 | 30 | -6.013712 | Copper resistance protein B | |
NH44784_009201 | 2 | 29 | -5.990001 | Multicopper oxidase | |
NH44784_009211 | 1 | 28 | -5.683333 | DNA-binding heavy metal response regulator | |
NH44784_009221 | 1 | 23 | -5.246248 | Heavy metal sensor histidine kinase | |
NH44784_009231 | 2 | 15 | -2.758088 | Transcriptional regulator, ArsR family | |
NH44784_009241 | 2 | 17 | -1.426023 | Lactoylglutathione lyase | |
NH44784_009251 | 3 | 16 | -1.523703 | Arsenate reductase | |
NH44784_009261 | 2 | 16 | -1.321448 | Arsenical-resistance protein ACR3 | |
NH44784_009271 | 2 | 16 | -0.163217 | Arsenate reductase | |
NH44784_009281 | 1 | 15 | -0.156866 | Transcriptional regulator, PadR family | |
NH44784_009291 | 1 | 15 | -0.145561 | Chromate transport protein ChrA | |
NH44784_009301 | 1 | 16 | -0.818040 | GCN5-related N-acetyltransferase | |
NH44784_009311 | 0 | 20 | -1.465848 | HYPOTHETICAL/UNKNOWN PROTEIN | |
NH44784_009321 | 0 | 18 | -1.739619 | putative plasmid stabilization protein | |
NH44784_009331 | 1 | 23 | -2.847721 | RND efflux system, inner membrane transporter | |
NH44784_009341 | 2 | 23 | -2.925141 | RND efflux system, membrane fusion protein CmeA | |
NH44784_009351 | 2 | 24 | -3.666589 | hypothetical protein | |
NH44784_009361 | 2 | 24 | -3.245239 | Pyruvate/2-oxoglutarate dehydrogenase | |
NH44784_009371 | 2 | 21 | -2.303216 | hypothetical protein | |
NH44784_009381 | 3 | 22 | -2.267967 | FIG01210837: hypothetical protein | |
NH44784_009391 | 3 | 22 | -1.987596 | FIG00976384: hypothetical protein | |
NH44784_009401 | 3 | 21 | -2.090735 | hypothetical protein | |
NH44784_009411 | 2 | 20 | -1.105070 | FIG00958347: hypothetical protein | |
NH44784_009421 | 2 | 15 | -1.150421 | FIG00959181: hypothetical protein | |
NH44784_009431 | 1 | 15 | -1.324190 | FIG00956406: hypothetical protein | |
NH44784_009441 | 1 | 15 | -0.828539 | FIG00955362: hypothetical protein | |
NH44784_009451 | 1 | 15 | -0.379360 | DNA repair protein RadC | |
NH44784_009461 | 1 | 14 | -0.012995 | Protein-disulfide isomerase | |
NH44784_009471 | 2 | 14 | 0.183995 | Type IV secretory pathway, VirB4 components | |
NH44784_009481 | 1 | 14 | 0.681256 | putative lipoprotein | |
NH44784_009491 | 1 | 16 | 0.515724 | hypothetical protein | |
NH44784_009501 | 2 | 19 | 1.089067 | FIG00958851: hypothetical protein | |
NH44784_009511 | 0 | 20 | -1.268605 | Possible exported protein | |
NH44784_009521 | 0 | 24 | -2.332080 | hypothetical protein | |
NH44784_009531 | 0 | 27 | -4.368491 | hypothetical protein | |
NH44784_009541 | 2 | 32 | -6.099307 | hypothetical protein | |
NH44784_009551 | 1 | 30 | -7.159745 | Candidate type III effector Hop protein | |
NH44784_009561 | 2 | 32 | -8.687616 | Excisionase domain protein | |
NH44784_009571 | 1 | 28 | -5.288142 | hypothetical protein | |
NH44784_009581 | 1 | 27 | -4.918244 | AAA family ATPase, possible cell division | |
NH44784_009591 | 1 | 23 | -4.055505 | FIG00931459: hypothetical protein | |
NH44784_009601 | 0 | 22 | -2.969966 | hypothetical protein APECO1_2271 | |
NH44784_009611 | 0 | 21 | -1.563651 | FIG00960841: hypothetical protein | |
NH44784_009621 | 0 | 18 | -0.423001 | ATPase involved in DNA repair | |
NH44784_009631 | 0 | 15 | 0.390456 | hypothetical protein | |
NH44784_009641 | -1 | 16 | 0.905383 | Type IV secretory pathway, VirD4 components | |
NH44784_009651 | 1 | 17 | 0.443309 | FIG00954712: hypothetical protein | |
NH44784_009661 | 1 | 18 | -0.282612 | FIG016425: Soluble lytic murein transglycosylase | |
NH44784_009671 | 2 | 18 | -1.323774 | probable exported protein STY4558 | |
NH44784_009681 | 3 | 20 | -1.977145 | FIG00978796: hypothetical protein | |
NH44784_009691 | 3 | 20 | -2.432671 | PilL protein | |
NH44784_009701 | 4 | 21 | -3.090660 | Superfamily II DNA/RNA helicases, SNF2 family | |
NH44784_009711 | 3 | 23 | -2.899501 | FIG00957490: hypothetical protein | |
NH44784_009721 | 3 | 23 | -3.173596 | FIG00954465: hypothetical protein | |
NH44784_009731 | 2 | 23 | -2.408966 | FIG023873: Plasmid related protein | |
NH44784_009741 | 3 | 23 | -3.048003 | FIG026997: Hypothetical protein | |
NH44784_009751 | 4 | 25 | -3.438832 | FIG041301: Hypothetical protein | |
NH44784_009761 | 3 | 24 | -2.213187 | FIG046709: Hypothetical protein | |
NH44784_009771 | 3 | 24 | -1.964680 | FIG036757: Plasmid-related protein | |
NH44784_009781 | 2 | 21 | -1.686440 | FIG034376: Hypothetical protein | |
NH44784_009791 | 2 | 17 | -0.819963 | protein of unknown function DUF932 | |
NH44784_009801 | 2 | 17 | -0.320644 | FIG049434: Periplasmic protein TonB, links inner | |
NH44784_009811 | 1 | 15 | 0.280461 | FIG01218638: hypothetical protein | |
NH44784_009821 | 1 | 17 | -0.793982 | FIG076210: Hypothetical protein | |
NH44784_009831 | 1 | 16 | -1.402231 | TnpA transposase | |
NH44784_009841 | 2 | 17 | -1.634357 | Mercuric ion reductase | |
NH44784_009851 | 4 | 22 | -3.572095 | Periplasmic mercury(+2) binding protein | |
NH44784_009861 | 3 | 21 | -3.767872 | Mercuric transport protein, MerT | |
NH44784_009871 | 3 | 23 | -4.338936 | Mercuric resistance operon regulatory protein | |
NH44784_009881 | 3 | 23 | -4.392531 | FIG076676: Hypothetical protein | |
NH44784_009891 | 2 | 26 | -4.694788 | hypothetical protein | |
NH44784_009901 | 2 | 24 | -4.312859 | FIG00902157: hypothetical protein | |
NH44784_009911 | 2 | 20 | -3.311630 | FIG01213552: hypothetical protein | |
NH44784_009921 | 2 | 21 | -3.633381 | hypothetical protein | |
NH44784_009931 | 2 | 22 | -3.634299 | hypothetical protein | |
NH44784_009941 | 1 | 23 | -3.689930 | hypothetical protein | |
NH44784_009951 | 1 | 22 | -3.041159 | Lipoprotein signal peptidase | |
NH44784_009961 | 1 | 21 | -2.923807 | Lead, cadmium, zinc and mercury transporting | |
NH44784_009971 | 1 | 25 | -3.398125 | Transcriptional regulator, MerR family | |
NH44784_009981 | 1 | 23 | -2.700469 | COG3000: Sterol desaturase | |
NH44784_009991 | 0 | 23 | -1.981579 | Cobalt-zinc-cadmium resistance protein CzcD | |
NH44784_010001 | 2 | 21 | -1.747912 | DNA topoisomerase III | |
NH44784_010011 | 2 | 19 | -0.623271 | Putative single-stranded DNA binding protein | |
NH44784_010021 | 2 | 19 | -0.240487 | Integrase regulator R | |
NH44784_010031 | 2 | 20 | 0.256358 | FIG141694: hypothetical protein in PFGI-1-like | |
NH44784_010041 | 2 | 21 | 0.354515 | FIG141751: hypothetical protein in PFGI-1-like | |
NH44784_010051 | 2 | 23 | -1.310763 | FIG004780: hypothetical protein in PFGI-1-like | |
NH44784_010061 | 2 | 23 | -2.282517 | Protein with ParB-like nuclease domain in | |
NH44784_010071 | 2 | 24 | -3.976332 | FIG034647: hypothetical protein in PFGI-1-like | |
NH44784_010081 | 2 | 26 | -4.857125 | Chromosome partitioning ATPase in PFGI-1-like | |
NH44784_010091 | 2 | 29 | -7.150813 | Transcriptional regulator in PFGI-1-like | |
NH44784_010101 | 2 | 29 | -6.920042 | FIG041388: hypothetical protein in PFGI-1-like | |
NH44784_010121 | 4 | 36 | -8.625123 | *Integrase | |
NH44784_010131 | 3 | 41 | -9.425449 | Predicted dye-decolorizing peroxidase | |
NH44784_010141 | 3 | 43 | -9.876508 | LysR family transcriptional regulator YnfL | |
NH44784_010151 | 3 | 42 | -9.543060 | Threonine dehydrogenase and related Zn-dependent | |
NH44784_010161 | 3 | 42 | -8.530118 | hypothetical protein | |
NH44784_010171 | 2 | 41 | -8.741448 | Excinuclease ABC subunit B | |
NH44784_010181 | 1 | 33 | -5.572533 | Transcriptional regulator, LysR family | |
NH44784_010191 | 2 | 32 | -5.938396 | Isopropylmalate/homocitrate/citramalate | |
NH44784_010201 | 2 | 32 | -6.089632 | Histone acetyltransferase HPA2 and related | |
NH44784_010211 | 1 | 33 | -6.536578 | Carbon-nitrogen hydrolase | |
NH44784_010221 | 2 | 33 | -6.703321 | S-(hydroxymethyl)glutathione dehydrogenase | |
NH44784_010231 | 2 | 35 | -5.980773 | Lactoylglutathione lyase and related lyases | |
NH44784_010241 | 3 | 34 | -4.664463 | Mlr6914 protein | |
NH44784_010251 | 2 | 25 | -2.727021 | S-formylglutathione hydrolase | |
NH44784_010261 | 2 | 28 | -2.758461 | hypothetical protein | |
NH44784_010271 | 3 | 27 | -2.573926 | NADH dehydrogenase | |
NH44784_010281 | 3 | 26 | -2.266359 | ATPase, AAA family | |
NH44784_010291 | 2 | 26 | -2.236306 | Na+/H+ antiporter NhaA type | |
NH44784_010301 | 1 | 24 | -3.321420 | Excinuclease ABC subunit A paralog of unknown | |
NH44784_010311 | 2 | 32 | -4.929208 | Pyruvate/2-oxoglutarate dehydrogenase | |
NH44784_010321 | 1 | 27 | -4.304919 | COGs COG2002 | |
NH44784_010331 | 2 | 27 | -3.971026 | hypothetical protein | |
NH44784_010341 | 2 | 25 | -3.250763 | hypothetical protein | |
NH44784_010351 | 3 | 26 | -3.143130 | hypothetical protein | |
NH44784_010361 | 3 | 25 | -1.477227 | FIG00958347: hypothetical protein | |
NH44784_010371 | 2 | 21 | -2.108829 | FIG00715740: hypothetical protein | |
NH44784_010381 | 1 | 20 | -2.020940 | FIG00956406: hypothetical protein | |
NH44784_010391 | 0 | 18 | -1.892690 | hypothetical protein | |
NH44784_010401 | 0 | 19 | -1.334824 | DNA repair protein RadC | |
NH44784_010411 | 1 | 18 | -1.313316 | Protein-disulfide isomerase | |
NH44784_010421 | 1 | 17 | -1.322227 | Type IV secretory pathway, VirB4 components | |
NH44784_010431 | 1 | 18 | -0.573145 | putative lipoprotein | |
NH44784_010441 | 2 | 20 | -0.753378 | hypothetical protein | |
NH44784_010451 | 3 | 22 | 0.277383 | corresponds to STY4569 from Accession AL513382: | |
NH44784_010461 | 5 | 29 | -2.970166 | Possible exported protein | |
NH44784_010471 | 3 | 33 | -4.867319 | hypothetical protein | |
NH44784_010481 | 3 | 32 | -6.667288 | FIG00953614: hypothetical protein | |
NH44784_010491 | 2 | 37 | -5.798711 | hypothetical protein | |
NH44784_010501 | 2 | 34 | -5.573346 | Candidate type III effector Hop protein | |
NH44784_010511 | 1 | 31 | -5.700157 | hypothetical protein | |
NH44784_010521 | 0 | 29 | -4.751653 | FIG00715720: hypothetical protein | |
NH44784_010531 | 0 | 28 | -3.658630 | FIG00715078: hypothetical protein | |
NH44784_010541 | 0 | 27 | -2.537586 | ATPase involved in DNA repair | |
NH44784_010551 | -1 | 20 | -1.161323 | hypothetical protein | |
NH44784_010561 | -1 | 21 | -0.647662 | Type IV secretory pathway, VirD4 components | |
NH44784_010571 | 1 | 34 | -3.338423 | FIG00954712: hypothetical protein | |
NH44784_010581 | 2 | 44 | -5.863941 | FIG016425: Soluble lytic murein transglycosylase | |
NH44784_010591 | 2 | 40 | -6.312183 | probable exported protein STY4558 | |
NH44784_010601 | 2 | 43 | -7.156451 | FIG00978796: hypothetical protein | |
NH44784_010611 | 2 | 44 | -7.893894 | PilL | |
NH44784_010621 | 3 | 42 | -7.789541 | FIG131328: Predicted ATP-dependent endonuclease | |
NH44784_010631 | 2 | 33 | -5.889898 | ATP-dependent DNA helicase UvrD/PcrA | |
NH44784_010641 | 4 | 24 | -4.547876 | Superfamily II DNA/RNA helicases, SNF2 family | |
NH44784_010651 | 4 | 25 | -4.044840 | FIG00957490: hypothetical protein | |
NH44784_010661 | 4 | 24 | -3.721529 | FIG00954465: hypothetical protein | |
NH44784_010671 | 3 | 23 | -3.159126 | FIG023873: Plasmid related protein | |
NH44784_010681 | 3 | 23 | -3.773907 | FIG026997: Hypothetical protein | |
NH44784_010691 | 3 | 28 | -4.453574 | FIG041301: Hypothetical protein | |
NH44784_010701 | 2 | 26 | -4.918947 | FIG046709: Hypothetical protein | |
NH44784_010711 | 1 | 26 | -5.452317 | FIG036757: Plasmid-related protein | |
NH44784_010721 | 2 | 25 | -5.450875 | FIG034376: Hypothetical protein | |
NH44784_010731 | 2 | 26 | -5.953155 | hypothetical protein | |
NH44784_010741 | 1 | 24 | -4.507991 | FIG049434: Periplasmic protein TonB, links inner | |
NH44784_010751 | 1 | 22 | -4.681040 | hypothetical protein | |
NH44784_010761 | 1 | 22 | -4.194189 | FIG00902157: hypothetical protein | |
NH44784_010771 | 2 | 20 | -3.394795 | hypothetical protein | |
NH44784_010781 | 1 | 24 | -3.196980 | hypothetical protein | |
NH44784_010791 | 1 | 25 | -3.335063 | DNA topoisomerase III | |
NH44784_010801 | 3 | 28 | -2.711939 | Single-stranded DNA-binding protein | |
NH44784_010811 | 3 | 29 | -2.334346 | Integrase regulator R | |
NH44784_010821 | 2 | 29 | -2.075374 | FIG141694: hypothetical protein in PFGI-1-like | |
NH44784_010831 | 2 | 31 | -2.253209 | FIG141751: hypothetical protein in PFGI-1-like | |
NH44784_010841 | 2 | 28 | -3.155130 | FIG004780: hypothetical protein in PFGI-1-like | |
NH44784_010851 | 1 | 26 | -2.895879 | Protein with ParB-like nuclease domain in | |
NH44784_010861 | 0 | 25 | -4.545547 | FIG034647: hypothetical protein in PFGI-1-like | |
NH44784_010871 | 1 | 19 | -4.056190 | Chromosome partitioning ATPase in PFGI-1-like | |
NH44784_010881 | 0 | 19 | -4.071137 | Transcriptional regulator in PFGI-1-like | |
NH44784_010891 | 1 | 19 | -4.128096 | FIG041388: hypothetical protein in PFGI-1-like | |
NH44784_010901 | 0 | 18 | -3.323423 | Transcriptional regulator, ArsR family | |
NH44784_010911 | 0 | 20 | -3.604976 | Arsenate reductase | |
NH44784_010921 | 1 | 20 | -3.131344 | Arsenical-resistance protein ACR3 | |
NH44784_010931 | 1 | 23 | -3.542425 | FIG00460211: hypothetical protein | |
NH44784_010941 | 1 | 20 | -3.596251 | Arsenate reductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008131 | HTHFIS | 29 | 0.027 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008151 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008211 | SHAPEPROTEIN | 141 | 3e-39 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008231 | RTXTOXIND | 30 | 0.006 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008271 | PF06057 | 34 | 3e-04 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008281 | CHANLCOLICIN | 35 | 6e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008291 | ACRIFLAVINRP | 28 | 0.012 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008361 | TCRTETB | 121 | 4e-32 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008371 | RTXTOXIND | 97 | 4e-24 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008421 | PF03544 | 30 | 0.024 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008631 | FLGFLGJ | 29 | 0.010 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008701 | 56KDTSANTIGN | 27 | 0.014 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008941 | ARGREPRESSOR | 33 | 0.001 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009001 | SACTRNSFRASE | 41 | 2e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009061 | HTHFIS | 30 | 0.009 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009111 | DHBDHDRGNASE | 27 | 0.014 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009201 | PF07132 | 31 | 0.011 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009211 | HTHFIS | 82 | 3e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009301 | SACTRNSFRASE | 28 | 0.014 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009331 | ACRIFLAVINRP | 124 | 4e-36 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009341 | RTXTOXIND | 51 | 2e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009391 | OMPADOMAIN | 30 | 0.003 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009811 | PYOCINKILLER | 26 | 0.039 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_009851 | ENTEROVIROMP | 27 | 0.007 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_010061 | ARGREPRESSOR | 29 | 0.032 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_010441 | PF02370 | 30 | 0.009 | M protein repeat | |
>PF02370#M protein repeat | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_010451 | SHIGARICIN | 29 | 0.014 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_010851 | ARGREPRESSOR | 33 | 0.001 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_010931 | TCRTETB | 29 | 0.024 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
11 | NH44784_013391 | NH44784_013581 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_013391 | 2 | 12 | 0.387201 | D-alanine--D-alanine ligase | |
NH44784_013401 | 2 | 12 | 0.920176 | UDP-N-acetylmuramate--alanine ligase | |
NH44784_013411 | 0 | 11 | 0.548898 | UDP-N-acetylglucosamine--N-acetylmuramyl- | |
NH44784_013421 | 0 | 11 | -0.070825 | Cell division protein FtsW | |
NH44784_013431 | -2 | 11 | 0.116867 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |
NH44784_013441 | -3 | 13 | -0.729113 | Phospho-N-acetylmuramoyl-pentapeptide- | |
NH44784_013451 | -1 | 9 | -0.035623 | UDP-N-acetylmuramoylalanyl-D-glutamate--2, | |
NH44784_013461 | 1 | 10 | -1.178766 | Cell division protein FtsI [Peptidoglycan | |
NH44784_013471 | 2 | 15 | -1.865287 | Cell division protein FtsL | |
NH44784_013481 | 2 | 15 | -2.187831 | rRNA small subunit methyltransferase H | |
NH44784_013491 | 1 | 15 | -2.794912 | Cell division protein MraZ | |
NH44784_013501 | 1 | 15 | -2.914428 | COG0488: ATPase components of ABC transporters | |
NH44784_013511 | -1 | 22 | -4.350814 | Dihydroorotase | |
NH44784_013521 | 1 | 25 | -5.150568 | Catalyzes the cleavage of | |
NH44784_013531 | -1 | 17 | -5.214522 | DNA topoisomerase III | |
NH44784_013541 | 0 | 15 | -4.543894 | Glycine cleavage system transcriptional | |
NH44784_013551 | 1 | 13 | -3.836012 | putative amino acid efflux protein | |
NH44784_013561 | 1 | 11 | -3.150161 | Probable transmembrane protein | |
NH44784_013581 | 1 | 9 | -3.225093 | Transcriptional regulator, AsnC family |
12 | NH44784_013781 | NH44784_013981 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_013781 | 0 | 15 | -3.552269 | Tricarboxylate transport transcriptional | |
NH44784_013791 | 3 | 16 | -3.500459 | Adenosine (5')-pentaphospho-(5'')-adenosine | |
NH44784_013801 | 4 | 17 | -3.049457 | prolyl-tRNA synthetase | |
NH44784_013811 | 5 | 22 | -3.612185 | 4-hydroxybenzoyl-CoA thioesterase family active | |
NH44784_013821 | 4 | 20 | -2.552006 | MotA/TolQ/ExbB proton channel family protein | |
NH44784_013831 | 3 | 16 | -1.445747 | Tol biopolymer transport system, TolR protein | |
NH44784_013841 | 3 | 15 | -0.802285 | TolA protein | |
NH44784_013851 | -2 | 13 | -0.479521 | tolB protein precursor, periplasmic protein | |
NH44784_013861 | -1 | 10 | 1.357506 | 18K peptidoglycan-associated outer membrane | |
NH44784_013871 | 0 | 12 | 2.048612 | TPR repeat containing exported protein; Putative | |
NH44784_013881 | 2 | 15 | 2.972739 | Iron(III) dicitrate transport system permease | |
NH44784_013891 | -1 | 12 | 1.059671 | Ferrichrome transport ATP-binding protein FhuC | |
NH44784_013901 | -1 | 12 | 0.628771 | hypothetical protein | |
NH44784_013911 | -1 | 11 | 0.435627 | putative hydrolase | |
NH44784_013921 | -2 | 9 | 0.302630 | Leucine-responsive regulatory protein, regulator | |
NH44784_013931 | -3 | 8 | 0.676516 | Protein of unknown function DUF6, transmembrane | |
NH44784_013941 | -2 | 9 | -0.363270 | Translation elongation factor G | |
NH44784_013951 | -1 | 11 | 0.947008 | Universal stress protein family | |
NH44784_013961 | 3 | 12 | 1.091396 | hypothetical protein | |
NH44784_013971 | 3 | 11 | 1.298336 | Transcriptional regulator, GntR family domain / | |
NH44784_013981 | 2 | 11 | 1.001053 | Permease of the drug/metabolite transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_013781 | HTHFIS | 91 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_013841 | IGASERPTASE | 72 | 8e-16 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_013861 | OMPADOMAIN | 92 | 9e-25 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_013891 | PF05272 | 29 | 0.019 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_013941 | TCRTETOQM | 638 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
13 | NH44784_014501 | NH44784_014661 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_014501 | 2 | 12 | -0.702907 | hypothetical protein | |
NH44784_014511 | 1 | 12 | -0.324652 | Type III secretion inner membrane protein | |
NH44784_014521 | 2 | 13 | 1.225199 | Type III secretion inner membrane protein | |
NH44784_014531 | 2 | 12 | 1.563107 | Type III secretion inner membrane protein | |
NH44784_014541 | 3 | 12 | 1.761477 | Type III secretion inner membrane protein | |
NH44784_014551 | 3 | 11 | 2.918170 | Type III secretion inner membrane protein | |
NH44784_014561 | 2 | 12 | 2.043454 | hypothetical protein | |
NH44784_014571 | 2 | 12 | 1.425159 | Type III secretion spans bacterial envelope | |
NH44784_014581 | 1 | 12 | 1.676430 | Flagellum-specific ATP synthase FliI | |
NH44784_014591 | 1 | 17 | 1.615339 | Type III secretion cytoplasmic protein (YscL | |
NH44784_014601 | 0 | 14 | 0.823783 | hypothetical protein | |
NH44784_014611 | 0 | 13 | -0.395854 | Type III secretion bridge between inner and | |
NH44784_014621 | 0 | 14 | -0.517904 | putative type III secretion protein | |
NH44784_014631 | 2 | 14 | -0.485163 | hypothetical protein | |
NH44784_014641 | 1 | 13 | -2.130958 | putative regulatory protein | |
NH44784_014651 | 2 | 12 | -2.511953 | putative outer protein B | |
NH44784_014661 | 2 | 10 | -1.815602 | putative outer protein D |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014511 | TYPE3IMSPROT | 346 | e-120 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014521 | TYPE3IMRPROT | 143 | 5e-44 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014531 | TYPE3IMQPROT | 71 | 3e-20 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014541 | TYPE3IMPPROT | 230 | 9e-79 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014551 | TYPE3OMOPROT | 74 | 8e-17 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014611 | FLGMRINGFLIF | 98 | 4e-25 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014641 | SYCDCHAPRONE | 56 | 8e-13 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD |
14 | NH44784_015071 | NH44784_015471 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_015071 | 2 | 19 | -2.342960 | probable iron binding protein from the | |
NH44784_015081 | 0 | 16 | -1.983599 | putative integral membrane protein | |
NH44784_015091 | -2 | 15 | -2.745222 | N-acetyl-gamma-glutamyl-phosphate reductase | |
NH44784_015101 | -2 | 13 | -3.444733 | SSU ribosomal protein S9p (S16e | |
NH44784_015111 | -1 | 15 | -3.270965 | LSU ribosomal protein L13p (L13Ae | |
NH44784_015121 | 0 | 13 | -1.925132 | Branched-chain amino acid transport ATP-binding | |
NH44784_015131 | 0 | 15 | -1.473847 | Branched-chain amino acid transport ATP-binding | |
NH44784_015141 | 1 | 15 | -1.558627 | Branched-chain amino acid transport system | |
NH44784_015151 | 1 | 17 | -1.391800 | High-affinity branched-chain amino acid | |
NH44784_015161 | 3 | 17 | -1.091015 | Leucine-, isoleucine-, valine-, threonine-, and | |
NH44784_015171 | 1 | 13 | -0.502072 | TRAP transporter solute receptor, unknown | |
NH44784_015181 | 0 | 14 | -1.026023 | TldE/PmbA protein, part of proposed TldE/TldD | |
NH44784_015191 | 1 | 14 | -0.901777 | FIG138315: Putative alpha helix protein | |
NH44784_015201 | 0 | 14 | 1.241884 | probable carboxylesterase | |
NH44784_015211 | -1 | 13 | 1.291368 | hypothetical protein | |
NH44784_015221 | 0 | 13 | 2.268625 | Hydroxymethylpyrimidine ABC transporter, ATPase | |
NH44784_015231 | 0 | 12 | 2.329646 | Hydroxymethylpyrimidine ABC | |
NH44784_015241 | -1 | 12 | 3.040896 | Nicotinamidase/isochorismatase family protein | |
NH44784_015251 | -2 | 10 | 3.479170 | Acetyl-CoA synthetase (ADP-forming) alpha and | |
NH44784_015261 | -1 | 13 | 2.699982 | Glutamyl-tRNA synthetase | |
NH44784_015271 | -1 | 11 | 2.361855 | putative membrane transport protein | |
NH44784_015281 | -3 | 14 | 1.851754 | putative lipoprotein | |
NH44784_015291 | -2 | 16 | 0.174143 | Transcriptional regulator, LysR family | |
NH44784_015301 | 0 | 18 | -1.073343 | hypothetical protein | |
NH44784_015311 | 2 | 18 | -1.950715 | hypothetical protein | |
NH44784_015321 | 1 | 14 | -2.350755 | Transcriptional regulator, AsnC family | |
NH44784_015331 | 0 | 15 | -1.678475 | Indolepyruvate ferredoxin oxidoreductase, alpha | |
NH44784_015341 | 1 | 15 | -3.611194 | Ribonucleotide reductase of class Ia | |
NH44784_015351 | 2 | 11 | -3.390206 | Ribonucleotide reductase of class Ia | |
NH44784_015361 | 0 | 11 | -2.489442 | histone protein | |
NH44784_015371 | -2 | 11 | -2.559525 | Integral membrane protein YggT, involved in | |
NH44784_015381 | -2 | 11 | -2.424536 | D-alanine--poly(phosphoribitol) ligase subunit | |
NH44784_015391 | -2 | 12 | -3.187928 | D-alanyl transfer protein DltB | |
NH44784_015401 | -1 | 13 | -0.935499 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_015411 | -1 | 13 | -0.081163 | Poly(glycerophosphate chain) D-alanine transfer | |
NH44784_015421 | 1 | 14 | -0.085990 | acyl carrier protein | |
NH44784_015431 | 2 | 14 | -0.031921 | Outer membrane lipoprotein | |
NH44784_015441 | 2 | 12 | -0.430728 | Sugar kinases, ribokinase family | |
NH44784_015451 | 3 | 14 | -1.113218 | Probable transmembrane protein | |
NH44784_015461 | 3 | 16 | -1.741419 | Ribosomal protein L11 methyltransferase | |
NH44784_015471 | 4 | 14 | -2.310420 | Biotin carboxylase of acetyl-CoA carboxylase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015241 | ISCHRISMTASE | 68 | 1e-15 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015271 | TCRTETB | 69 | 9e-15 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015301 | PF06057 | 28 | 0.029 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015311 | PHAGEIV | 31 | 0.004 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015431 | PF07132 | 29 | 0.014 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015451 | PF03544 | 36 | 2e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein |
15 | NH44784_016121 | NH44784_016211 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_016121 | 0 | 13 | 3.159166 | Maltose/maltodextrin transport ATP-binding | |
NH44784_016131 | 0 | 13 | 3.561870 | probable sugar ABC transporter, permease | |
NH44784_016141 | 0 | 11 | 3.838819 | putative sugar uptake ABC transporter permease | |
NH44784_016151 | -1 | 9 | 4.041500 | hypothetical protein | |
NH44784_016161 | 0 | 11 | 2.340578 | transcriptional regulator, TetR family | |
NH44784_016171 | 2 | 15 | 1.964974 | D-aminoacylase | |
NH44784_016181 | 2 | 15 | 1.592315 | D-amino acid dehydrogenase small subunit | |
NH44784_016191 | 1 | 15 | 0.873775 | hypothetical protein | |
NH44784_016201 | 1 | 15 | 0.824048 | RND efflux system, outer membrane | |
NH44784_016211 | 3 | 16 | 0.731142 | AcrB/AcrD/AcrF family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016161 | HTHTETR | 53 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016171 | UREASE | 45 | 4e-07 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016181 | adhesinmafb | 30 | 0.026 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016211 | ACRIFLAVINRP | 820 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
16 | NH44784_017431 | NH44784_017591 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_017431 | 2 | 20 | -0.670410 | Organic hydroperoxide resistance protein | |
NH44784_017441 | 2 | 21 | -1.535027 | putative secreted protein | |
NH44784_017451 | 3 | 24 | -2.147955 | 4-carboxymuconolactone decarboxylase | |
NH44784_017461 | 4 | 28 | -2.167352 | probable major facilitator superfamily (MFS) | |
NH44784_017471 | 6 | 32 | -4.689683 | Glycosyltransferase | |
NH44784_017481 | 5 | 30 | -5.095113 | Endonuclease relaxase | |
NH44784_017491 | 3 | 38 | -7.165154 | hypothetical protein | |
NH44784_017501 | 7 | 48 | -9.092006 | hypothetical protein | |
NH44784_017511 | 6 | 45 | -9.167959 | hypothetical protein | |
NH44784_017521 | 6 | 47 | -9.241466 | hypothetical protein | |
NH44784_017531 | 5 | 40 | -7.222174 | COG1961: Site-specific recombinases, DNA | |
NH44784_017541 | 5 | 49 | -9.791320 | hypothetical protein | |
NH44784_017551 | 5 | 49 | -9.986751 | hypothetical protein | |
NH44784_017561 | 4 | 45 | -9.306591 | putative antirestriction protein | |
NH44784_017571 | 3 | 30 | -6.000032 | hypothetical protein | |
NH44784_017581 | 2 | 23 | -4.481443 | VirD4 protein | |
NH44784_017591 | 1 | 19 | -3.708181 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_017441 | NUCEPIMERASE | 41 | 2e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_017461 | TCRTETA | 86 | 1e-20 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_017571 | CHANLCOLICIN | 27 | 0.004 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. |
17 | NH44784_017921 | NH44784_017971 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_017921 | 2 | 18 | -2.147098 | Uroporphyrinogen III decarboxylase | |
NH44784_017931 | 3 | 19 | -2.431770 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_017941 | 5 | 20 | -3.696171 | ATP synthase epsilon chain | |
NH44784_017951 | 5 | 22 | -4.385067 | ATP synthase beta chain | |
NH44784_017961 | 3 | 20 | -4.698275 | ATP synthase gamma chain | |
NH44784_017971 | 2 | 21 | -4.563278 | ATP synthase alpha chain |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_017931 | HTHFIS | 50 | 2e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
18 | NH44784_018831 | NH44784_018941 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_018831 | 2 | 18 | -0.225195 | Ferredoxin | |
NH44784_018841 | 2 | 17 | -0.560814 | hypothetical protein | |
NH44784_018851 | 2 | 13 | -0.034438 | Ferredoxin | |
NH44784_018861 | 2 | 13 | 0.026122 | Paralog of coenzyme PQQ synthesis protein C | |
NH44784_018871 | 1 | 11 | 1.172677 | hypothetical protein | |
NH44784_018881 | -1 | 8 | 0.777975 | hypothetical protein | |
NH44784_018891 | 0 | 7 | 0.066514 | hypothetical protein | |
NH44784_018901 | 1 | 7 | -0.171231 | Twin-arginine translocation pathway signal | |
NH44784_018911 | 2 | 9 | -0.351551 | probable sulfite:cytochrome c oxidoreductase | |
NH44784_018921 | 3 | 10 | -0.557402 | hypothetical protein | |
NH44784_018931 | 3 | 12 | -0.075179 | Site-specific recombinase | |
NH44784_018941 | 2 | 11 | -0.089514 | Sigma-fimbriae tip adhesin |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_018921 | TCRTETB | 47 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
19 | NH44784_019381 | NH44784_019521 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_019381 | -1 | 18 | 3.019602 | hypothetical protein | |
NH44784_019391 | 0 | 24 | 1.975705 | hypothetical protein | |
NH44784_019401 | 1 | 20 | 1.265488 | Coenzyme F420-dependent N5,N10-methylene | |
NH44784_019411 | 0 | 18 | 0.947071 | The iron-vibriobactin/enterobactin uptake | |
NH44784_019421 | -2 | 23 | -1.328557 | ABC-type Fe3+-siderophore transport | |
NH44784_019431 | -3 | 26 | -2.732567 | COG0609: ABC-type Fe3+-siderophore transport | |
NH44784_019441 | -2 | 27 | -3.690574 | Ferric enterobactin-binding periplasmic protein | |
NH44784_019451 | -2 | 30 | -4.113507 | Ferrichrome-iron receptor | |
NH44784_019461 | -1 | 37 | -4.237072 | putative transcriptional regulator | |
NH44784_019471 | -1 | 38 | -4.810570 | hypothetical protein | |
NH44784_019481 | -1 | 38 | -4.857139 | hypothetical protein | |
NH44784_019491 | -1 | 39 | -4.821940 | hypothetical protein | |
NH44784_019501 | -2 | 29 | -4.191629 | UvrD/REP helicase | |
NH44784_019511 | -3 | 24 | -4.296394 | hypothetical protein | |
NH44784_019521 | -2 | 12 | -4.108210 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_019381 | CHANLCOLICIN | 29 | 0.037 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_019431 | RTXTOXINA | 28 | 0.042 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_019451 | RTXTOXINC | 29 | 0.042 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_019491 | HTHFIS | 32 | 0.004 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
20 | NH44784_019841 | NH44784_019981 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_019841 | 3 | 13 | 1.035186 | Cytosine permease | |
NH44784_019851 | 5 | 13 | 0.926011 | Allophanate hydrolase 2 subunit 2 | |
NH44784_019861 | 4 | 12 | -0.142379 | Allophanate hydrolase 2 subunit 1 | |
NH44784_019871 | 2 | 13 | 0.670282 | Biotin carboxylase | |
NH44784_019881 | 0 | 10 | 1.520213 | Biotin carboxyl carrier protein | |
NH44784_019891 | 0 | 9 | 1.210931 | Lactam utilization protein LamB | |
NH44784_019901 | -1 | 10 | 2.220911 | Transcriptional regulator, LysR family | |
NH44784_019911 | 0 | 11 | 2.446211 | Outer membrane protein W precursor | |
NH44784_019921 | 0 | 10 | 2.671199 | hypothetical protein | |
NH44784_019931 | 0 | 10 | 1.835048 | Possible MFS Superfamily transporter precursor | |
NH44784_019941 | 0 | 12 | 0.479312 | hypothetical protein | |
NH44784_019951 | 2 | 12 | 0.536029 | Enoyl-[acyl-carrier-protein] reductase [FMN] | |
NH44784_019961 | 3 | 14 | -0.945914 | Methionine ABC transporter ATP-binding protein | |
NH44784_019971 | 2 | 12 | -1.610313 | Uncharacterized ABC transporter, permease | |
NH44784_019981 | 3 | 13 | -2.005276 | Uncharacterized ABC transporter, periplasmic |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_019881 | RTXTOXIND | 41 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_019911 | OUTRMMBRANEA | 34 | 4e-04 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_019931 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
21 | NH44784_020191 | NH44784_020341 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_020191 | 3 | 13 | -3.197830 | Outer membrane stress sensor protease DegS | |
NH44784_020201 | 4 | 20 | -4.805138 | FIG137478: Hypothetical protein YbgI | |
NH44784_020211 | 4 | 18 | -5.812606 | Large-conductance mechanosensitive channel | |
NH44784_020221 | 3 | 20 | -4.505367 | Ubiquinol-cytochrome C reductase iron-sulfur | |
NH44784_020231 | -1 | 15 | -3.544509 | Ubiquinol--cytochrome c reductase, cytochrome B | |
NH44784_020241 | 0 | 12 | -3.169542 | ubiquinol cytochrome C oxidoreductase,cytochrome | |
NH44784_020251 | -1 | 9 | -1.108347 | Stringent starvation protein A | |
NH44784_020261 | 0 | 10 | 0.330828 | ClpXP protease specificity-enhancing factor / | |
NH44784_020271 | 1 | 10 | 1.414660 | hypothetical protein | |
NH44784_020291 | 0 | 9 | 1.223986 | *Gluconate transporter family protein | |
NH44784_020311 | -1 | 9 | 2.149886 | *hypothetical protein | |
NH44784_020321 | 0 | 7 | 3.885237 | transcriptional regulator, LysR family | |
NH44784_020331 | 1 | 8 | 3.456696 | hypothetical protein | |
NH44784_020341 | 2 | 7 | 1.654641 | Cysteine desulfurase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_020191 | V8PROTEASE | 70 | 2e-15 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_020211 | MECHCHANNEL | 125 | 5e-40 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. |
22 | NH44784_020871 | NH44784_020971 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_020871 | 2 | 10 | -0.026744 | probable glyoxalase | |
NH44784_020881 | 2 | 10 | 0.848989 | transcriptional regulator, AraC family | |
NH44784_020891 | 2 | 8 | 1.240643 | N-methylhydantoinase A | |
NH44784_020901 | 2 | 8 | 2.149414 | N-methylhydantoinase B | |
NH44784_020911 | 2 | 10 | 3.774279 | MFS general substrate transporter | |
NH44784_020921 | 1 | 10 | 3.847414 | Transcriptional regulator, IclR family | |
NH44784_020931 | 1 | 11 | 3.604280 | thiolase | |
NH44784_020941 | 1 | 12 | 3.469618 | Protein of unknown function DUF35 | |
NH44784_020951 | 0 | 11 | 3.109559 | hypothetical protein | |
NH44784_020961 | 1 | 11 | 3.100392 | Acetyl-CoA synthetase (ADP-forming) alpha and | |
NH44784_020971 | 0 | 14 | 3.104097 | 3-oxoacyl-[acyl-carrier protein] reductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_020911 | TCRTETA | 39 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_020971 | DHBDHDRGNASE | 121 | 1e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
23 | NH44784_021101 | NH44784_021151 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_021101 | 1 | 22 | -3.926023 | Putative threonine efflux protein | |
NH44784_021111 | 1 | 26 | -6.119739 | hypothetical protein | |
NH44784_021121 | 1 | 30 | -4.817366 | protein of unknown function DUF1232 | |
NH44784_021131 | 2 | 36 | -4.551023 | hypothetical protein | |
NH44784_021141 | 2 | 23 | -1.012645 | FIG00954026: hypothetical protein | |
NH44784_021151 | 2 | 18 | 0.405068 | Hypothetical Protein |
24 | NH44784_022011 | NH44784_022141 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_022011 | 2 | 14 | -3.228624 | FIG002283: Isochorismatase family protein | |
NH44784_022021 | 2 | 14 | -3.099125 | FIG022886: Transcriptional regulator, LysR | |
NH44784_022031 | 3 | 13 | -3.205959 | DNA gyrase subunit B | |
NH44784_022041 | 2 | 13 | -3.738697 | DNA polymerase III beta subunit | |
NH44784_022051 | 1 | 11 | -2.693852 | Chromosomal replication initiator protein DnaA | |
NH44784_022061 | 3 | 14 | -2.532844 | hypothetical protein | |
NH44784_022071 | 0 | 13 | -0.549983 | LSU ribosomal protein L34p | |
NH44784_022081 | -1 | 12 | -0.104819 | Ribonuclease P protein component | |
NH44784_022091 | 0 | 13 | -0.342785 | hypothetical protein | |
NH44784_022101 | 0 | 12 | -0.557968 | Inner membrane protein translocase component | |
NH44784_022111 | -1 | 10 | -0.021036 | Catalase | |
NH44784_022121 | 1 | 10 | 0.576265 | Cysteine synthase | |
NH44784_022131 | 1 | 12 | -0.394505 | hypothetical protein | |
NH44784_022141 | 2 | 13 | -0.961216 | Alpha-ketoglutarate-dependent taurine |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_022051 | PYOCINKILLER | 31 | 0.008 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_022101 | 60KDINNERMP | 464 | e-161 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. |
25 | NH44784_022271 | NH44784_022401 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_022271 | -2 | 17 | -3.292052 | Tricarboxylate transport protein TctB | |
NH44784_022281 | -2 | 16 | -3.219952 | Tricarboxylate transport membrane protein TctA | |
NH44784_022291 | -2 | 14 | -3.238556 | Aspartate aminotransferase | |
NH44784_022301 | -1 | 17 | -2.841725 | Ammonia monooxygenase | |
NH44784_022311 | -1 | 16 | -3.015997 | Cold shock protein CspG | |
NH44784_022321 | -2 | 13 | -2.044513 | tRNA uridine 5-carboxymethylaminomethyl | |
NH44784_022331 | -1 | 11 | -1.014742 | rRNA small subunit methyltransferase, glucose | |
NH44784_022341 | -2 | 11 | -1.166231 | Chromosome (plasmid) partitioning protein ParA / | |
NH44784_022351 | -1 | 11 | -0.392432 | Putative acetyltransferase, GnaT family | |
NH44784_022361 | -1 | 11 | 0.057608 | Chromosome (plasmid) partitioning protein ParB / | |
NH44784_022371 | 2 | 10 | 0.467374 | L-asparaginase | |
NH44784_022381 | 1 | 10 | 0.245609 | LysR family transcriptional regulator lrhA | |
NH44784_022391 | 2 | 9 | 0.093778 | hypothetical protein | |
NH44784_022401 | 2 | 10 | 0.391407 | Cystathionine beta-lyase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_022351 | SACTRNSFRASE | 34 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
26 | NH44784_023291 | NH44784_023371 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_023291 | -1 | 13 | -3.002008 | Deoxyguanosinetriphosphate triphosphohydrolase | |
NH44784_023301 | 2 | 28 | -6.135196 | Glutathione S-transferase | |
NH44784_023311 | 2 | 33 | -7.274173 | Excinuclease ABC subunit A | |
NH44784_023321 | 4 | 52 | -10.818921 | Putative transport protein | |
NH44784_023331 | 4 | 57 | -12.286930 | Single-stranded DNA-binding protein | |
NH44784_023341 | 4 | 60 | -12.681852 | putative enzyme; Integration, recombination | |
NH44784_023351 | 4 | 52 | -11.293653 | FIG00959392: hypothetical protein | |
NH44784_023361 | 1 | 31 | -6.633463 | Phosphonate ABC transporter permease protein | |
NH44784_023371 | -1 | 23 | -3.839910 | Phosphonate ABC transporter phosphate-binding |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023321 | TCRTETA | 61 | 3e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023331 | PRTACTNFAMLY | 28 | 0.024 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. |
27 | NH44784_023481 | NH44784_023811 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_023481 | 3 | 17 | -0.846111 | hypothetical protein | |
NH44784_023491 | 2 | 12 | -1.085453 | hypothetical protein | |
NH44784_023501 | 1 | 10 | -1.079603 | 4-hydroxybenzoate polyprenyltransferase | |
NH44784_023511 | -1 | 10 | -0.264920 | putative aminotransferase | |
NH44784_023521 | 2 | 15 | -0.509993 | Free methionine-(R)-sulfoxide reductase,contains | |
NH44784_023531 | 1 | 15 | -0.649092 | Dihydrodipicolinate synthase | |
NH44784_023541 | 1 | 14 | -0.951702 | putative desaturase | |
NH44784_023551 | -1 | 13 | -0.592690 | putative fatty acid desaturase | |
NH44784_023561 | -1 | 13 | -0.960839 | 3-oxoacyl-[acyl-carrier-protein] synthase III | |
NH44784_023571 | -1 | 11 | -1.443223 | FIG00431745: hypothetical protein | |
NH44784_023581 | -2 | 11 | -1.132338 | hypothetical protein | |
NH44784_023591 | -1 | 11 | -2.637515 | Type I antifreeze protein | |
NH44784_023601 | -1 | 15 | -3.808013 | Transporter | |
NH44784_023611 | 1 | 23 | -5.446058 | Aspartyl-tRNA synthetase | |
NH44784_023621 | 3 | 37 | -7.994825 | putative endonuclease/exonuclease/phosphatase | |
NH44784_023631 | 2 | 41 | -9.381889 | Cardiolipin synthetase | |
NH44784_023641 | 2 | 49 | -10.780437 | Permease of the drug/metabolite transporter | |
NH44784_023651 | 2 | 49 | -11.552432 | Multidrug resistance protein B | |
NH44784_023661 | 3 | 47 | -12.798740 | UDP-glucose dehydrogenase | |
NH44784_023671 | 4 | 47 | -12.742196 | dTDP-glucose 4,6-dehydratase | |
NH44784_023681 | 3 | 44 | -11.417711 | UDP-N-acetylglucosamine 4,6-dehydratase | |
NH44784_023691 | 2 | 50 | -10.710861 | Bacillosamine/Legionaminic acid biosynthesis | |
NH44784_023701 | 2 | 49 | -10.932023 | hypothetical protein | |
NH44784_023711 | 2 | 52 | -10.248215 | Pseudaminic acid biosynthesis protein | |
NH44784_023721 | 1 | 54 | -9.808826 | Imidazole glycerol phosphate synthase | |
NH44784_023731 | 0 | 53 | -10.018041 | Imidazole glycerol phosphate synthase cyclase | |
NH44784_023741 | 1 | 55 | -11.188458 | N-Acetylneuraminate cytidylyltransferase | |
NH44784_023751 | 2 | 54 | -10.818289 | N-acetylneuraminate synthase | |
NH44784_023761 | 1 | 53 | -10.034370 | ORF_14 | |
NH44784_023771 | 1 | 50 | -9.224188 | hypothetical protein | |
NH44784_023781 | 1 | 50 | -8.627783 | hypothetical protein | |
NH44784_023791 | 1 | 49 | -8.278984 | Putative | |
NH44784_023801 | 0 | 46 | -6.932306 | Undecaprenyl-phosphate N-acetylglucosaminyl | |
NH44784_023811 | -1 | 39 | -5.784702 | UDP-N-acetylglucosamine 4,6-dehydratase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023651 | TCRTETB | 103 | 7e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023671 | NUCEPIMERASE | 172 | 1e-53 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023681 | NUCEPIMERASE | 76 | 1e-17 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023801 | PREPILNPTASE | 30 | 0.015 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023811 | NUCEPIMERASE | 78 | 1e-17 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
28 | NH44784_023931 | NH44784_024201 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_023931 | -1 | 21 | -4.227442 | D-alanyl-D-alanine carboxypeptidase | |
NH44784_023941 | 1 | 34 | -6.850198 | D-alanine aminotransferase | |
NH44784_023951 | 2 | 40 | -7.939921 | Proposed lipoate regulatory protein YbeD | |
NH44784_023961 | 2 | 43 | -8.067229 | Octanoate-[acyl-carrier-protein]-protein-N- | |
NH44784_023971 | 2 | 47 | -9.593165 | FOG: TPR repeat, SEL1 subfamily | |
NH44784_023981 | 2 | 53 | -11.314381 | hypothetical protein | |
NH44784_023991 | 3 | 51 | -11.344550 | Glucose-1-phosphate thymidylyltransferase | |
NH44784_024001 | 3 | 49 | -10.897288 | hypothetical protein; putative methyl | |
NH44784_024011 | 3 | 51 | -11.261295 | hypothetical protein | |
NH44784_024021 | 4 | 49 | -11.426023 | hypothetical protein | |
NH44784_024031 | 3 | 50 | -11.220012 | 3-oxoacyl-[acyl-carrier-protein] | |
NH44784_024041 | 1 | 46 | -10.787863 | UDP-3-O-(3-hydroxymyristoyl) glucosamine | |
NH44784_024051 | 0 | 40 | -9.955435 | hypothetical protein | |
NH44784_024061 | 1 | 23 | -7.173979 | hypothetical protein | |
NH44784_024071 | 1 | 19 | -6.187928 | putative transcription regulator transcription | |
NH44784_024081 | 0 | 17 | -5.987874 | Lipoate synthase | |
NH44784_024091 | 1 | 13 | -4.773822 | dTDP-glucose 4,6-dehydratase | |
NH44784_024101 | 2 | 15 | -2.850924 | hypothetical protein | |
NH44784_024111 | 0 | 13 | -2.681877 | ATP-dependent hsl protease ATP-binding subunit | |
NH44784_024121 | -1 | 12 | -1.804274 | ATP-dependent protease HslV | |
NH44784_024131 | 0 | 13 | -1.575213 | C4-type zinc finger protein, DksA/TraR family | |
NH44784_024141 | 1 | 12 | -1.202036 | Putative metal chaperone, involved in Zn | |
NH44784_024151 | 2 | 18 | 0.881352 | Zinc uptake regulation protein ZUR | |
NH44784_024161 | 4 | 19 | 1.146747 | Zinc ABC transporter, ATP-binding protein ZnuC | |
NH44784_024171 | 4 | 16 | 1.187613 | Zinc ABC transporter, inner membrane permease | |
NH44784_024181 | 3 | 14 | 0.910513 | Zinc ABC transporter, periplasmic-binding | |
NH44784_024191 | 3 | 13 | 0.902691 | hypothetical protein | |
NH44784_024201 | 3 | 11 | 1.678643 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023931 | BLACTAMASEA | 39 | 2e-05 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_024091 | NUCEPIMERASE | 159 | 5e-48 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_024101 | NEISSPPORIN | 26 | 0.037 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_024181 | adhesinb | 262 | 1e-88 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_024201 | FLGMRINGFLIF | 30 | 0.014 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. |
29 | NH44784_025911 | NH44784_026281 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_025911 | 2 | 17 | -1.048461 | hypothetical protein | |
NH44784_025921 | 1 | 15 | -1.103740 | putative transcriptional regulator | |
NH44784_025931 | 2 | 17 | -1.729054 | Glutamate 5-kinase | |
NH44784_025941 | 3 | 13 | -1.348684 | COG0536: GTP-binding protein Obg | |
NH44784_025951 | 2 | 20 | -1.940162 | LSU ribosomal protein L27p | |
NH44784_025961 | 1 | 16 | -0.513795 | LSU ribosomal protein L21p | |
NH44784_025971 | 1 | 14 | 1.221546 | Octaprenyl-diphosphate synthase | |
NH44784_025991 | 2 | 14 | 1.694710 | *hypothetical protein | |
NH44784_026001 | 2 | 13 | 1.504750 | Biotin carboxylase | |
NH44784_026011 | 2 | 11 | -0.363411 | Hydrolases of the alpha/beta superfamily | |
NH44784_026021 | 2 | 10 | -0.306919 | Nitrilase/cyanide hydratase and apolipoprotein | |
NH44784_026031 | 1 | 9 | -0.035203 | Beta-lactamase | |
NH44784_026041 | 1 | 9 | 0.063565 | FIG00732247: hypothetical protein | |
NH44784_026051 | 1 | 13 | 0.141427 | hypothetical protein | |
NH44784_026061 | 0 | 12 | 0.559871 | Malate Na(+) symporter | |
NH44784_026071 | 1 | 14 | 2.864210 | transcriptional regulator of protochatechuate | |
NH44784_026081 | 1 | 10 | 3.730635 | Quinone oxidoreductase | |
NH44784_026091 | -1 | 16 | 3.335881 | IroE protein | |
NH44784_026101 | 0 | 15 | 2.842601 | transcriptional regulator, LysR family | |
NH44784_026111 | 3 | 13 | 3.011026 | Mercuric resistance operon regulatory protein | |
NH44784_026121 | 2 | 14 | 2.958061 | Non-heme chloroperoxidase | |
NH44784_026131 | 1 | 14 | 2.505356 | hypothetical protein | |
NH44784_026141 | 2 | 18 | 2.832683 | hypothetical protein | |
NH44784_026151 | 2 | 16 | 3.152108 | Ribulose-5-phosphate 4-epimerase and related | |
NH44784_026161 | 1 | 14 | 2.979899 | Hydroxypyruvate isomerase | |
NH44784_026171 | 2 | 12 | 2.539097 | Nucleoside-diphosphate-sugar epimerases | |
NH44784_026181 | 2 | 13 | 2.239997 | D-beta-hydroxybutyrate dehydrogenase | |
NH44784_026191 | -1 | 11 | 1.729316 | Predicted pyridoxine biosynthesis protein | |
NH44784_026201 | -1 | 10 | 1.268889 | regulatory protein GntR, HTH:GntR, C-terminal | |
NH44784_026211 | -1 | 12 | 0.916319 | transcriptional regulator, LysR family | |
NH44784_026221 | 0 | 12 | 0.818505 | major facilitator superfamily MFS_1 | |
NH44784_026231 | -1 | 12 | 0.624547 | hypothetical protein | |
NH44784_026241 | -2 | 12 | 0.158034 | Zinc-regulated outer membrane receptor | |
NH44784_026251 | 2 | 14 | -0.023724 | Hydroxypyruvate isomerase | |
NH44784_026261 | 1 | 18 | -3.461647 | hypothetical protein | |
NH44784_026271 | 0 | 15 | -3.006570 | Putative DMT superfamily metabolite efflux | |
NH44784_026281 | -3 | 12 | -3.089788 | Lysine exporter protein (LYSE/YGGA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_025931 | CARBMTKINASE | 37 | 7e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_025951 | TYPE3IMRPROT | 25 | 0.024 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026031 | BLACTAMASEA | 47 | 3e-08 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026171 | NUCEPIMERASE | 91 | 4e-23 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026201 | DHBDHDRGNASE | 31 | 0.002 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026221 | TCRTETB | 29 | 0.029 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026241 | PF00577 | 32 | 0.011 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026271 | PF06580 | 29 | 0.021 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
30 | NH44784_026481 | NH44784_026591 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_026481 | 2 | 13 | 1.890726 | Permeases of the major facilitator superfamily | |
NH44784_026491 | 1 | 12 | 1.193024 | transcriptional regulator, LysR family | |
NH44784_026501 | 1 | 14 | 0.115115 | hypothetical protein | |
NH44784_026511 | -1 | 10 | -2.077224 | Transcriptional regulator, LysR family | |
NH44784_026521 | -2 | 12 | -3.982620 | hypothetical protein | |
NH44784_026531 | 3 | 29 | -8.148556 | hypothetical protein | |
NH44784_026541 | 3 | 31 | -9.150038 | transposase, IS4 family protein | |
NH44784_026551 | 4 | 31 | -8.720757 | Glucosamine--fructose-6-phosphate | |
NH44784_026561 | 5 | 37 | -9.171528 | Glycosyl transferase, group 2 family protein | |
NH44784_026571 | 6 | 36 | -8.684234 | D amino acid oxidase (DAO) family | |
NH44784_026581 | 6 | 35 | -8.436692 | hypothetical protein | |
NH44784_026591 | 0 | 27 | -4.245131 | FIG01204965: hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026481 | TCRTETB | 103 | 6e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
31 | NH44784_027411 | NH44784_027841 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_027411 | 2 | 10 | 1.338536 | response regulator, NarL-family | |
NH44784_027421 | 1 | 10 | 0.963120 | two-component hybrid sensor and regulator | |
NH44784_027431 | 0 | 9 | 0.541190 | Oxalate/formate antiporter | |
NH44784_027441 | 0 | 10 | 0.488219 | cupin domain protein | |
NH44784_027451 | -1 | 9 | 0.246886 | putative integrase (Remnant | |
NH44784_027461 | -1 | 9 | 0.579167 | hypothetical protein | |
NH44784_027471 | -1 | 10 | 0.604949 | hypothetical protein | |
NH44784_027481 | 2 | 14 | -1.107552 | putative phage repressor | |
NH44784_027491 | 2 | 13 | -1.396074 | hypothetical protein | |
NH44784_027501 | 3 | 15 | -2.540412 | hypothetical protein | |
NH44784_027511 | 3 | 25 | -2.958965 | Phage tail assembly chaperone | |
NH44784_027521 | 3 | 30 | -5.035921 | hypothetical protein | |
NH44784_027531 | 2 | 26 | -5.155270 | COG5281: Phage-related minor tail protein | |
NH44784_027541 | 3 | 26 | -4.448324 | hypothetical protein | |
NH44784_027551 | 1 | 24 | -3.694505 | hypothetical protein | |
NH44784_027561 | 2 | 12 | -2.500380 | hypothetical protein | |
NH44784_027571 | 2 | 11 | -2.518448 | hypothetical protein | |
NH44784_027581 | 1 | 9 | -1.725189 | Phage minor tail protein | |
NH44784_027591 | 1 | 9 | -1.281306 | Phage tail assembly protein | |
NH44784_027601 | 1 | 8 | -1.316116 | Phage tail assembly protein I | |
NH44784_027611 | 2 | 8 | -0.863884 | Phage tail fiber protein | |
NH44784_027621 | 1 | 8 | -0.461936 | hypothetical protein | |
NH44784_027631 | 1 | 9 | -0.387668 | hypothetical protein | |
NH44784_027641 | 1 | 10 | -0.341840 | Phage tail assembly protein I | |
NH44784_027651 | 0 | 10 | -0.879202 | transcriptional regulator, LysR-family | |
NH44784_027661 | 0 | 9 | -1.537730 | D-beta-hydroxybutyrate dehydrogenase | |
NH44784_027671 | 1 | 16 | -2.088432 | Leucine-, isoleucine-, valine-, threonine-, and | |
NH44784_027681 | 1 | 21 | -2.343164 | hypothetical protein AF1210 | |
NH44784_027691 | 3 | 46 | -7.044608 | hypothetical protein | |
NH44784_027701 | 2 | 45 | -8.777351 | Peptidyl-prolyl cis-trans isomerase ppiC | |
NH44784_027711 | 1 | 46 | -9.002815 | Glutamate Aspartate periplasmic binding protein | |
NH44784_027721 | 1 | 55 | -10.563450 | hypothetical protein | |
NH44784_027731 | 1 | 50 | -12.264631 | hypothetical protein | |
NH44784_027741 | 0 | 49 | -11.827915 | hypothetical protein | |
NH44784_027751 | -1 | 38 | -10.341412 | Integral inner membrane protein of type IV | |
NH44784_027761 | -1 | 34 | -9.075691 | hypothetical protein | |
NH44784_027771 | -2 | 39 | -6.994063 | Minor pilin of type IV secretion complex (VirB5 | |
NH44784_027781 | -1 | 43 | -6.305506 | FIG00431650: hypothetical protein | |
NH44784_027791 | -2 | 41 | -6.888765 | IncQ plasmid conjugative transfer DNA nicking | |
NH44784_027801 | -1 | 36 | -5.884132 | hypothetical 20.3 kDa protein | |
NH44784_027811 | -2 | 23 | -4.072488 | FIG00482846: hypothetical protein | |
NH44784_027821 | -2 | 19 | -3.477806 | Transcriptional regulator, GntR family domain / | |
NH44784_027831 | 0 | 11 | -3.671043 | hypothetical protein | |
NH44784_027841 | 0 | 10 | -3.553993 | FIG01212980: hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027411 | HTHFIS | 70 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027421 | PF06580 | 41 | 5e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027431 | TCRTETB | 36 | 3e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027661 | DHBDHDRGNASE | 91 | 9e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027741 | cdtoxina | 29 | 0.045 | Cytolethal distending toxin A signature. | |
>cdtoxina#Cytolethal distending toxin A signature. |
32 | NH44784_028001 | NH44784_028201 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_028001 | 0 | 27 | -3.886582 | 2-dehydro-3-deoxygalactonokinase | |
NH44784_028011 | -1 | 30 | -3.409389 | D-galactonate regulator, IclR family | |
NH44784_028021 | -1 | 30 | -2.772825 | FIG006045: Sigma factor, ECF subfamily | |
NH44784_028031 | -1 | 32 | -2.102289 | Iron siderophore sensor protein | |
NH44784_028041 | -1 | 29 | -2.361734 | TonB-dependent receptor | |
NH44784_028051 | -1 | 25 | 1.021918 | extracellular heme-binding protein | |
NH44784_028061 | -1 | 20 | 2.065109 | transport protein HasD | |
NH44784_028071 | 0 | 14 | 1.859463 | ABC exporter for hemopore HasA, membrane fusion | |
NH44784_028081 | 0 | 14 | 0.970713 | putative outer membrane protein | |
NH44784_028091 | 0 | 22 | -3.800655 | probable LysR-family transcriptional regulator | |
NH44784_028101 | 2 | 26 | -5.005110 | hypothetical protein | |
NH44784_028111 | 1 | 25 | -4.910062 | Aldehyde dehydrogenase | |
NH44784_028121 | 1 | 28 | -5.978318 | UDP-glucose 4-epimerase | |
NH44784_028131 | 2 | 32 | -6.547770 | Tricarboxylate transport protein TctC | |
NH44784_028141 | 4 | 36 | -7.124869 | hypothetical protein | |
NH44784_028151 | 2 | 17 | -0.008399 | hypothetical protein | |
NH44784_028161 | 2 | 14 | 0.496041 | hypothetical protein | |
NH44784_028171 | 2 | 16 | 0.416147 | Uncharacterized glutathione S-transferase-like | |
NH44784_028181 | 4 | 16 | 0.297186 | N-acetylmuramoyl-L-alanine amidase | |
NH44784_028191 | 4 | 16 | -0.203316 | hypothetical protein | |
NH44784_028201 | 2 | 16 | -0.477118 | FIG001154: CcsA-related protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028051 | PF06438 | 63 | 2e-14 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028071 | RTXTOXIND | 391 | e-135 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028121 | NUCEPIMERASE | 169 | 3e-52 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028141 | RTXTOXINA | 33 | 0.007 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family |
33 | NH44784_028821 | NH44784_028941 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_028821 | 2 | 13 | 1.332224 | Transcriptional regulator, GntR family domain / | |
NH44784_028831 | 3 | 14 | 1.374930 | hypothetical protein | |
NH44784_028841 | 2 | 13 | 0.896672 | putative Cytochrome bd2, subunit II | |
NH44784_028851 | 2 | 11 | 1.076420 | putative Cytochrome bd2, subunit I | |
NH44784_028861 | 4 | 11 | 0.696324 | Probable signal peptide protein | |
NH44784_028871 | 5 | 13 | 0.650000 | Permease of the drug/metabolite transporter | |
NH44784_028881 | 4 | 13 | 0.589877 | Transcriptional regulator, LysR family | |
NH44784_028891 | 3 | 12 | 1.499786 | Acetoacetyl-CoA reductase | |
NH44784_028901 | 2 | 11 | 2.142881 | hypothetical protein | |
NH44784_028911 | 2 | 11 | 2.188294 | ABC-type multidrug transport system, permease | |
NH44784_028921 | 1 | 9 | 2.415860 | ABC-type multidrug transport system, permease | |
NH44784_028931 | -1 | 8 | 3.209041 | secretion protein HlyD | |
NH44784_028941 | 0 | 9 | 3.055224 | RND efflux system, outer membrane lipoprotein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028891 | DHBDHDRGNASE | 122 | 5e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028911 | ABC2TRNSPORT | 58 | 1e-11 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028931 | RTXTOXIND | 70 | 2e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028941 | RTXTOXIND | 33 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
34 | NH44784_029871 | NH44784_030021 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_029871 | 3 | 13 | -2.134723 | LSU ribosomal protein L25p | |
NH44784_029881 | 1 | 13 | -2.951222 | Peptidyl-tRNA hydrolase | |
NH44784_029891 | 2 | 16 | -5.241018 | hypothetical protein | |
NH44784_029901 | 1 | 19 | -6.989056 | GTP-binding and nucleic acid-binding protein | |
NH44784_029911 | 1 | 27 | -8.828690 | putative integrase | |
NH44784_029921 | 1 | 27 | -8.805636 | Prophage P4 integrase | |
NH44784_029931 | 0 | 28 | -8.851152 | Bacterial regulatory proteins, AsnC family | |
NH44784_029941 | 0 | 29 | -8.673545 | type III restriction-modification | |
NH44784_029951 | 0 | 26 | -7.397823 | Adenine specific DNA methylase (Mod-related | |
NH44784_029961 | -1 | 26 | -5.621462 | Sll1503 protein | |
NH44784_029971 | -1 | 21 | -3.295512 | putative DNA helicase | |
NH44784_029981 | -1 | 19 | -1.717017 | Integrase | |
NH44784_029991 | -1 | 14 | -0.781964 | FIG141751: hypothetical protein in PFGI-1-like | |
NH44784_030001 | 0 | 11 | -0.565592 | TonB-dependent siderophore receptor | |
NH44784_030011 | 2 | 11 | -0.389680 | ABC transporter ATP-binding protein | |
NH44784_030021 | 2 | 9 | -0.027737 | Permeases of the major facilitator superfamily |
35 | NH44784_030381 | NH44784_030671 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_030381 | 3 | 14 | -0.990417 | 2-aminomuconate deaminase | |
NH44784_030391 | 3 | 14 | -1.348051 | 2-aminomuconate semialdehyde dehydrogenase | |
NH44784_030401 | 2 | 16 | -3.125803 | Transcriptional regulator, MarR family | |
NH44784_030411 | 4 | 16 | -3.642153 | serum resistance protein | |
NH44784_030421 | 4 | 23 | -5.064250 | Heat shock protein 60 family chaperone GroEL | |
NH44784_030431 | 3 | 28 | -5.971478 | Heat shock protein 60 family co-chaperone GroES | |
NH44784_030441 | 4 | 39 | -10.371932 | hypothetical protein | |
NH44784_030451 | 4 | 41 | -11.468649 | Integrase, catalytic region | |
NH44784_030461 | 5 | 42 | -11.277839 | transposase IS3/IS911 family protein | |
NH44784_030471 | 4 | 42 | -11.052579 | hypothetical protein | |
NH44784_030481 | 2 | 42 | -10.980524 | hypothetical protein | |
NH44784_030491 | 1 | 42 | -10.334349 | hypothetical protein | |
NH44784_030501 | 1 | 41 | -9.313450 | hypothetical protein | |
NH44784_030511 | 0 | 40 | -8.458613 | outer membrane efflux protein | |
NH44784_030521 | 1 | 37 | -7.454476 | HlyD family secretion protein | |
NH44784_030531 | 2 | 34 | -6.631395 | cyclolysin secretion ATP-binding protein | |
NH44784_030541 | 3 | 31 | -6.086821 | Alkaline phosphatase | |
NH44784_030551 | 1 | 18 | -1.741481 | hypothetical protein | |
NH44784_030561 | 1 | 17 | -2.022149 | hypothetical protein | |
NH44784_030571 | 1 | 17 | -2.132510 | Choline dehydrogenase | |
NH44784_030581 | 0 | 17 | -3.569453 | Betaine aldehyde dehydrogenase | |
NH44784_030591 | 0 | 17 | -4.500244 | Hydroxymethylpyrimidine ABC | |
NH44784_030601 | 1 | 15 | -4.146675 | Hydroxymethylpyrimidine ABC | |
NH44784_030611 | 1 | 18 | -4.058777 | ABC transporter (ATP-binding protein | |
NH44784_030621 | 2 | 18 | -3.900837 | Uncharacterized glutathione S-transferase-like | |
NH44784_030631 | 4 | 18 | -3.943506 | Endoribonuclease L-PSP | |
NH44784_030641 | 5 | 19 | -3.948279 | hypothetical protein | |
NH44784_030651 | 4 | 25 | -4.205715 | Gentisate 1,2-dioxygenase | |
NH44784_030661 | 3 | 30 | -3.589766 | GntR domain protein | |
NH44784_030671 | 3 | 26 | -3.276190 | N-methylhydantoinase B |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_030521 | RTXTOXIND | 356 | e-121 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_030541 | RTXTOXINA | 65 | 5e-12 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family |
36 | NH44784_031111 | NH44784_031241 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_031111 | 2 | 16 | -0.570197 | Transcriptional regulator, TetR family | |
NH44784_031121 | 3 | 14 | 0.008440 | hypothetical protein | |
NH44784_031131 | 3 | 15 | 0.483958 | hypothetical protein | |
NH44784_031141 | 3 | 16 | 0.586109 | LysR family transcriptional regulator STM2281 | |
NH44784_031151 | 1 | 13 | 1.307663 | LysR family transcriptional regulator STM2281 | |
NH44784_031161 | 2 | 15 | 1.404479 | Aspartate aminotransferase | |
NH44784_031171 | 1 | 15 | 1.522502 | similar to acetolactate synthase large subunit | |
NH44784_031181 | -1 | 17 | 1.524490 | hypothetical protein | |
NH44784_031191 | 0 | 15 | 0.931962 | Acetylornithine deacetylase | |
NH44784_031201 | 0 | 14 | 0.553973 | Permease of the drug/metabolite transporter | |
NH44784_031211 | 2 | 18 | -0.059503 | hypothetical protein | |
NH44784_031221 | 1 | 15 | 0.153257 | L-carnitine dehydratase/bile acid-inducible | |
NH44784_031231 | 2 | 16 | 0.460301 | hypothetical protein | |
NH44784_031241 | 3 | 16 | -0.212204 | Acyl-CoA dehydrogenase, short-chain specific |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_031111 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
37 | NH44784_031341 | NH44784_031401 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_031341 | 2 | 10 | 2.904814 | mRNA 3-end processing factor | |
NH44784_031351 | 3 | 9 | 2.861667 | ATP-dependent DNA ligase | |
NH44784_031361 | 4 | 9 | 3.048998 | FIG003033: Helicase domain protein | |
NH44784_031371 | 5 | 7 | 2.535417 | FIG006285: hypothetical protein | |
NH44784_031381 | 5 | 7 | 2.753081 | Inner membrane ABC-transporter YbtQ | |
NH44784_031391 | 4 | 8 | 2.515361 | Putative ABC iron siderophore transporter, fused | |
NH44784_031401 | 3 | 10 | 2.249190 | major facilitator superfamily MFS_1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_031401 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
38 | NH44784_031531 | NH44784_031681 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_031531 | 2 | 14 | 2.920443 | LysR family transcriptional regulator YbhD | |
NH44784_031541 | 2 | 11 | 2.180942 | D-3-phosphoglycerate dehydrogenase | |
NH44784_031551 | 1 | 11 | 2.538813 | 3-hydroxyisobutyrate dehydrogenase | |
NH44784_031561 | -1 | 11 | 1.884419 | Histone acetyltransferase HPA2 and related | |
NH44784_031571 | -2 | 10 | 2.002272 | alpha/beta hydrolase fold | |
NH44784_031581 | -2 | 10 | 1.739535 | Biotin sulfoxide reductase | |
NH44784_031591 | 0 | 10 | 1.069215 | Dihydrodipicolinate synthase | |
NH44784_031601 | 1 | 10 | 2.156352 | hypothetical protein | |
NH44784_031611 | 2 | 10 | 2.357930 | hypothetical protein | |
NH44784_031621 | 3 | 9 | 2.545822 | Transcriptional regulator, AraC family | |
NH44784_031631 | 4 | 9 | 2.691514 | Hypothetical Protein | |
NH44784_031641 | 5 | 10 | 2.658214 | Probable MFS transporter | |
NH44784_031651 | 1 | 9 | 2.461056 | transcriptional regulator | |
NH44784_031661 | 1 | 10 | 1.369792 | Multidrug-efflux transporter, major facilitator | |
NH44784_031671 | 0 | 9 | 2.123949 | ATP-dependent Clp protease proteolytic subunit | |
NH44784_031681 | -1 | 11 | 3.186683 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_031561 | SACTRNSFRASE | 41 | 3e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_031641 | TCRTETA | 96 | 5e-24 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_031661 | TCRTETA | 104 | 6e-27 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
39 | NH44784_031961 | NH44784_032071 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_031961 | 2 | 11 | 3.264480 | hypothetical protein | |
NH44784_031971 | 3 | 13 | 3.640643 | Transcriptional regulator, DeoR family | |
NH44784_031981 | 0 | 9 | 2.202938 | Glutathione S-transferase | |
NH44784_031991 | -1 | 8 | 0.674345 | FIG00455408: hypothetical protein | |
NH44784_032001 | -1 | 10 | -0.209718 | Transcriptional regulator, ArsR family | |
NH44784_032011 | 1 | 9 | -0.117250 | hypothetical protein | |
NH44784_032021 | 0 | 12 | -2.049076 | Transcriptional regulator, AraC family | |
NH44784_032031 | 2 | 13 | -2.800788 | outer membrane porin | |
NH44784_032041 | 3 | 11 | -3.230438 | outer membrane porin | |
NH44784_032051 | 3 | 11 | -2.604056 | outer membrane porin | |
NH44784_032061 | 2 | 12 | -2.277366 | Cytochrome oxidase biogenesis protein | |
NH44784_032071 | 2 | 12 | -3.037398 | Cytochrome O ubiquinol oxidase subunit IV |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032011 | TCRTETB | 57 | 4e-11 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032031 | ECOLNEIPORIN | 96 | 1e-24 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032041 | ECOLNEIPORIN | 85 | 2e-20 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032051 | ECOLNEIPORIN | 94 | 1e-23 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032071 | ACRIFLAVINRP | 27 | 0.038 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
40 | NH44784_032391 | NH44784_032881 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_032391 | 0 | 9 | 3.286081 | Hydrogen peroxide-inducible genes activator | |
NH44784_032401 | 0 | 8 | 3.432029 | RNA polymerase sigma-70 factor, ECF subfamily | |
NH44784_032411 | 0 | 8 | 3.730713 | transmembrane sensor, putative | |
NH44784_032421 | -1 | 8 | 3.314607 | Ferrichrome-iron receptor | |
NH44784_032431 | 1 | 8 | 4.278412 | transcriptional regulator, GntR family | |
NH44784_032441 | 3 | 10 | 4.501383 | Aconitate hydratase | |
NH44784_032451 | 3 | 10 | 3.689755 | hypothetical protein | |
NH44784_032461 | 3 | 12 | 3.927902 | DNA-3-methyladenine glycosylase II | |
NH44784_032471 | 1 | 13 | 3.179425 | Putative phosphatase YieH | |
NH44784_032481 | 2 | 12 | 3.151168 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_032491 | 1 | 11 | 3.234564 | putative Mg(2+) transporter | |
NH44784_032501 | -1 | 10 | 3.332285 | Mannose-6-phosphate isomerase | |
NH44784_032511 | 0 | 10 | 3.805035 | Transcriptional regulator, AraC family | |
NH44784_032521 | 0 | 10 | 3.069988 | Glyoxalase family protein | |
NH44784_032531 | -1 | 9 | 2.990738 | PvdO, pyoverdine responsive serine/threonine | |
NH44784_032541 | -2 | 9 | 2.324990 | Transcriptional regulator, AraC family | |
NH44784_032551 | 0 | 8 | 1.588507 | Macrophage infectivity potentiator-related | |
NH44784_032561 | -1 | 8 | 0.937076 | Alkylated DNA repair protein AlkB | |
NH44784_032571 | -1 | 8 | 1.437887 | hypothetical protein | |
NH44784_032581 | -2 | 10 | 1.965209 | Cardiolipin synthetase | |
NH44784_032591 | 1 | 13 | 1.796973 | Predicted transcriptional regulators | |
NH44784_032601 | 0 | 12 | 3.016582 | Histone acetyltransferase HPA2 and related | |
NH44784_032611 | 1 | 12 | 3.628409 | hypothetical protein | |
NH44784_032621 | 1 | 13 | 4.314158 | Epoxide hydrolase | |
NH44784_032631 | 2 | 13 | 3.877007 | Transcriptional regulator | |
NH44784_032641 | 4 | 13 | 3.549434 | hypothetical protein | |
NH44784_032651 | 3 | 12 | 3.407310 | short-chain dehydrogenase/reductase SDR | |
NH44784_032661 | 5 | 13 | 3.411999 | hypothetical protein | |
NH44784_032671 | 5 | 13 | 3.398264 | hypothetical protein | |
NH44784_032681 | 5 | 12 | 3.964708 | Hydrogen peroxide-inducible genes activator | |
NH44784_032691 | 3 | 13 | 3.412378 | MATE efflux family protein | |
NH44784_032701 | -2 | 20 | 1.499147 | probable transcriptional regulator | |
NH44784_032711 | -2 | 20 | 1.482613 | FIG00986051: hypothetical protein | |
NH44784_032721 | -2 | 23 | 0.846704 | Permease of the drug/metabolite transporter | |
NH44784_032731 | -1 | 26 | 0.089128 | Transcriptional regulator, AraC family | |
NH44784_032741 | 2 | 30 | -1.569805 | Galactose-binding protein regulator | |
NH44784_032751 | 1 | 23 | -0.074672 | Chloramphenicol acetyltransferase | |
NH44784_032761 | 0 | 10 | 1.920180 | NADP-dependent malic enzyme | |
NH44784_032771 | 1 | 10 | 2.415455 | hypothetical protein | |
NH44784_032781 | -1 | 10 | 2.318470 | hypothetical protein | |
NH44784_032791 | -2 | 11 | 1.130991 | hypothetical protein | |
NH44784_032801 | -1 | 12 | -0.868829 | TonB-dependent receptor | |
NH44784_032811 | 2 | 15 | -3.677159 | Nitrogenase FeMo-cofactor synthesis molybdenum | |
NH44784_032821 | 2 | 17 | -4.334582 | hypothetical protein | |
NH44784_032831 | 2 | 15 | -3.620663 | Cytochrome O ubiquinol oxidase subunit IV | |
NH44784_032841 | 1 | 15 | -2.899708 | Cytochrome O ubiquinol oxidase subunit III | |
NH44784_032851 | 1 | 16 | -1.916993 | Cytochrome O ubiquinol oxidase subunit I | |
NH44784_032861 | 0 | 13 | 0.887101 | Cytochrome O ubiquinol oxidase subunit II | |
NH44784_032871 | 0 | 15 | 2.557872 | Dna binding response regulator PrrA (RegA | |
NH44784_032881 | 2 | 14 | 2.992752 | Sensor histidine kinase PrrB (RegB |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032481 | DHBDHDRGNASE | 108 | 2e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032601 | SACTRNSFRASE | 37 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032651 | DHBDHDRGNASE | 95 | 2e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032871 | HTHFIS | 96 | 8e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
41 | NH44784_033201 | NH44784_033251 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_033201 | 0 | 13 | 3.690165 | hypothetical protein | |
NH44784_033211 | 0 | 15 | 4.192358 | ADA regulatory protein / | |
NH44784_033221 | 2 | 13 | 3.417658 | Methylated-DNA--protein-cysteine | |
NH44784_033231 | 1 | 13 | 3.930473 | probable permease protein | |
NH44784_033241 | -1 | 13 | 3.165384 | hypothetical protein | |
NH44784_033251 | 0 | 14 | 3.061699 | Probable two-component sensor, near polyamine |
42 | NH44784_033531 | NH44784_033621 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_033531 | 2 | 11 | 1.753893 | hypothetical protein | |
NH44784_033541 | 1 | 8 | 2.199883 | Propeptide, PepSY amd peptidase M4 | |
NH44784_033551 | 1 | 9 | 2.680573 | Two-component system response regulator QseB | |
NH44784_033561 | 1 | 9 | 2.868592 | Sensor protein PhoQ | |
NH44784_033571 | 3 | 11 | 2.424362 | Universal stress protein family | |
NH44784_033581 | 2 | 11 | 2.243466 | putative universal stress protein | |
NH44784_033591 | 1 | 10 | 2.528779 | Glutamate racemase | |
NH44784_033601 | 2 | 11 | 1.400064 | LysR family transcriptional regulator STM3121 | |
NH44784_033611 | 3 | 11 | 0.841550 | Chromate transport protein ChrA | |
NH44784_033621 | 2 | 12 | 1.521553 | Chromate transport protein ChrA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_033551 | HTHFIS | 95 | 1e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_033561 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
43 | NH44784_035781 | NH44784_036041 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_035781 | 0 | 20 | -6.608950 | Phosphate ABC transporter, periplasmic | |
NH44784_035791 | 0 | 24 | -6.891140 | Phosphate transport system permease protein PstC | |
NH44784_035801 | 1 | 27 | -7.000206 | Phosphate transport system permease protein PstA | |
NH44784_035811 | 1 | 32 | -7.341684 | Phosphate transport ATP-binding protein PstB (TC | |
NH44784_035821 | 1 | 37 | -6.976353 | benzoate MFS transporter BenK | |
NH44784_035841 | 1 | 43 | -8.137782 | *type III restriction enzyme, res subunit | |
NH44784_035851 | -2 | 23 | -3.947497 | Transcriptional regulator, LysR family | |
NH44784_035861 | -2 | 22 | -2.750988 | hypothetical protein | |
NH44784_035871 | -1 | 21 | -1.678549 | 4-carboxymuconolactone decarboxylase | |
NH44784_035881 | -1 | 24 | -2.326924 | 4-carboxymuconolactone decarboxylase | |
NH44784_035891 | -2 | 22 | -2.885877 | FIG01219199: hypothetical protein | |
NH44784_035901 | -1 | 20 | -3.197360 | oxidoreductase, short-chain | |
NH44784_035911 | 0 | 20 | -2.675202 | hypothetical protein | |
NH44784_035921 | -1 | 17 | -3.256169 | drug:proton antiporter | |
NH44784_035931 | 0 | 16 | -3.821567 | NAD(P)H oxidoreductase YRKL | |
NH44784_035941 | 0 | 16 | -3.714756 | Butyryl-CoA dehydrogenase | |
NH44784_035951 | 1 | 17 | -3.307232 | hypothetical protein | |
NH44784_035961 | 0 | 16 | -2.330502 | hypothetical protein | |
NH44784_035971 | -1 | 18 | -2.100885 | Aldehyde dehydrogenase | |
NH44784_035981 | 0 | 18 | -2.596695 | putative thiolase | |
NH44784_035991 | 1 | 21 | -2.920099 | protein of unknown function DUF35 | |
NH44784_036001 | 1 | 18 | -3.233604 | Enoyl-CoA hydratase | |
NH44784_036011 | 1 | 18 | -2.892404 | Enoyl-CoA hydratase | |
NH44784_036021 | 1 | 18 | -3.911782 | hypothetical protein | |
NH44784_036031 | 1 | 18 | -3.860574 | FIG01198985: hypothetical protein | |
NH44784_036041 | 0 | 15 | -3.401455 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_035821 | TCRTETA | 56 | 1e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_035901 | DHBDHDRGNASE | 87 | 2e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_035911 | TCRTETB | 36 | 2e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_035921 | TCRTETB | 28 | 0.028 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
44 | NH44784_036161 | NH44784_036401 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_036161 | 0 | 17 | -3.453246 | Enoyl-CoA hydratase/isomerase | |
NH44784_036171 | 0 | 19 | -3.982349 | Long-chain-fatty-acid--CoA ligase | |
NH44784_036181 | -1 | 22 | -4.884670 | Naphthoate synthase | |
NH44784_036191 | -1 | 27 | -5.029174 | L-carnitine dehydratase/bile acid-inducible | |
NH44784_036201 | -1 | 30 | -6.020410 | sigma54 specific transcriptional regulator, Fis | |
NH44784_036211 | 0 | 34 | -6.305216 | hypothetical protein | |
NH44784_036221 | -1 | 28 | -4.616990 | Oxidoreductase, aldo/keto reductase family | |
NH44784_036231 | 0 | 23 | -4.608258 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_036241 | 0 | 24 | -4.563278 | D-beta-hydroxybutyrate dehydrogenase | |
NH44784_036251 | 0 | 23 | -4.050878 | Cupin 2 conserved barrel domain protein | |
NH44784_036261 | 1 | 27 | -5.038191 | 4-carboxymuconolactone decarboxylase | |
NH44784_036271 | 0 | 29 | -5.895630 | hypothetical protein | |
NH44784_036281 | 1 | 31 | -6.315745 | conserved hypothetical signal peptide protein | |
NH44784_036291 | 2 | 39 | -7.966108 | hypothetical protein | |
NH44784_036301 | 2 | 38 | -7.795071 | Xanthine transporter,putative | |
NH44784_036311 | 2 | 33 | -7.243359 | Transcriptional regulator, LysR family | |
NH44784_036321 | 1 | 29 | -6.311810 | Outer membrane protein romA | |
NH44784_036331 | 1 | 26 | -5.207049 | DNA repair protein RadC | |
NH44784_036341 | 2 | 26 | -4.668751 | phage integrase, putative | |
NH44784_036351 | -1 | 17 | -2.245695 | hypothetical protein | |
NH44784_036361 | -2 | 13 | -2.944746 | putative transferase | |
NH44784_036371 | 1 | 12 | -4.241237 | hypothetical protein | |
NH44784_036381 | 0 | 12 | -3.819986 | Transporter, LysE family | |
NH44784_036391 | -1 | 11 | -3.742165 | hypothetical protein | |
NH44784_036401 | -2 | 8 | -3.252232 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_036201 | HTHFIS | 358 | e-120 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_036231 | DHBDHDRGNASE | 103 | 1e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_036241 | DHBDHDRGNASE | 134 | 1e-40 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
45 | NH44784_037561 | NH44784_038201 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_037561 | 0 | 11 | -3.099383 | GTP-binding protein EngA | |
NH44784_037571 | 0 | 13 | -2.897121 | Histidinol-phosphate aminotransferase | |
NH44784_037581 | 0 | 15 | -2.691425 | RNA-binding protein Hfq | |
NH44784_037591 | -1 | 14 | -2.598393 | GTP-binding protein HflX | |
NH44784_037601 | -1 | 13 | -2.791841 | HflK protein | |
NH44784_037611 | -1 | 13 | -2.508700 | HflC protein | |
NH44784_037621 | 1 | 13 | -2.938134 | ATP phosphoribosyltransferase regulatory | |
NH44784_037631 | 1 | 12 | -3.463665 | Adenylosuccinate synthetase | |
NH44784_037641 | 1 | 13 | -3.432496 | Xanthine-guanine phosphoribosyltransferase | |
NH44784_037651 | 1 | 12 | -2.905133 | SSU ribosomal protein S21p | |
NH44784_037661 | 0 | 11 | -2.308140 | DNA primase | |
NH44784_037671 | -1 | 10 | -2.568676 | RNA polymerase sigma factor RpoD | |
NH44784_037691 | -1 | 17 | -1.910872 | *hypothetical protein | |
NH44784_037701 | -2 | 17 | -1.938485 | Putative lipopolysaccharide biosynthesis-related | |
NH44784_037711 | 0 | 18 | -2.854929 | hypothetical protein | |
NH44784_037721 | 1 | 18 | -3.159727 | Probable lipopolysaccharide modification | |
NH44784_037731 | 3 | 21 | -3.758471 | hypothetical protein | |
NH44784_037741 | 2 | 19 | -2.987239 | hypothetical protein | |
NH44784_037751 | 2 | 20 | -3.016295 | phage-related hypothetical protein | |
NH44784_037761 | 5 | 37 | -7.137287 | Recombinational DNA repair protein RecT | |
NH44784_037771 | 5 | 42 | -7.164218 | hypothetical protein | |
NH44784_037781 | 3 | 46 | -7.287558 | hypothetical protein | |
NH44784_037791 | 2 | 46 | -7.240681 | phage-related hypothetical protein | |
NH44784_037801 | 2 | 47 | -7.654980 | hypothetical protein | |
NH44784_037811 | 1 | 43 | -6.131054 | hypothetical protein | |
NH44784_037821 | -1 | 30 | 0.146029 | hypothetical protein | |
NH44784_037831 | -2 | 28 | -0.778774 | hypothetical protein | |
NH44784_037841 | -2 | 28 | -0.869002 | hypothetical protein | |
NH44784_037851 | -1 | 25 | -0.748266 | hypothetical protein | |
NH44784_037861 | 1 | 24 | -1.211108 | hypothetical protein | |
NH44784_037871 | 2 | 23 | -1.446792 | hypothetical protein | |
NH44784_037881 | 2 | 19 | -2.065462 | hypothetical protein | |
NH44784_037891 | 2 | 18 | -1.247388 | FIG00956635: hypothetical protein | |
NH44784_037901 | 2 | 16 | -1.012503 | hypothetical protein | |
NH44784_037911 | 2 | 15 | -1.359984 | hypothetical protein | |
NH44784_037921 | 2 | 14 | -0.829316 | hypothetical protein | |
NH44784_037931 | 1 | 13 | -0.767962 | hypothetical protein | |
NH44784_037941 | 1 | 14 | -1.075996 | Mlr8006 protein | |
NH44784_037951 | 2 | 17 | -1.289830 | hypothetical protein | |
NH44784_037961 | 2 | 16 | -1.732146 | hypothetical protein | |
NH44784_037971 | 0 | 20 | -1.605718 | hypothetical protein | |
NH44784_037981 | -1 | 18 | -1.903493 | hypothetical protein | |
NH44784_037991 | 0 | 18 | -2.279942 | hypothetical protein | |
NH44784_038001 | -1 | 17 | -2.012237 | hypothetical protein | |
NH44784_038011 | 0 | 17 | -2.300216 | hypothetical protein | |
NH44784_038021 | 0 | 17 | -2.399544 | hypothetical protein | |
NH44784_038031 | 1 | 18 | -2.214096 | hypothetical protein | |
NH44784_038041 | 2 | 20 | -1.966564 | hypothetical protein | |
NH44784_038051 | 2 | 19 | -1.880479 | tail length tape measure protein | |
NH44784_038061 | 3 | 20 | -1.471561 | hypothetical protein | |
NH44784_038071 | 2 | 21 | -1.899316 | hypothetical protein | |
NH44784_038081 | 2 | 21 | -1.799814 | putative bacteriophage protein | |
NH44784_038091 | 1 | 25 | -1.329684 | hypothetical protein | |
NH44784_038101 | 1 | 27 | -1.953801 | hypothetical protein | |
NH44784_038111 | 1 | 29 | -2.377555 | Putative bacteriophage protein | |
NH44784_038121 | 3 | 33 | -3.306606 | hypothetical membrane associated protein | |
NH44784_038131 | 0 | 36 | -0.594498 | phage-related putative membrane protein | |
NH44784_038141 | 0 | 38 | -0.262846 | phage-related hypothetical protein | |
NH44784_038151 | 0 | 37 | 0.255658 | hypothetical protein | |
NH44784_038161 | 0 | 32 | 0.546766 | hypothetical protein | |
NH44784_038171 | 1 | 31 | 0.780478 | integral membrane protein | |
NH44784_038181 | 1 | 31 | 0.889638 | hypothetical protein | |
NH44784_038191 | 3 | 32 | 0.958502 | hypothetical protein | |
NH44784_038201 | 3 | 30 | 0.111432 | Flp pilus assembly protein RcpC/CpaB |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_037941 | RTXTOXIND | 29 | 0.034 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
46 | NH44784_038351 | NH44784_038401 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_038351 | 5 | 15 | -2.308974 | diguanylate cyclase/phosphodiesterase (GGDEF & | |
NH44784_038361 | 6 | 18 | -2.180683 | Chorismate synthase | |
NH44784_038371 | 6 | 18 | -2.025712 | Zn-dependent protease with chaperone function | |
NH44784_038381 | 6 | 19 | -2.155353 | GGDEF and EAL domain proteins | |
NH44784_038391 | 6 | 19 | -2.292396 | FIGfam010717 | |
NH44784_038401 | 7 | 20 | -2.338950 | T1SS secreted agglutinin (RTX |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_038401 | CABNDNGRPT | 97 | 1e-22 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. |
47 | NH44784_038521 | NH44784_038591 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_038521 | 0 | 22 | -3.760290 | tRNA pseudouridine synthase A | |
NH44784_038531 | 1 | 22 | -4.680793 | TRAP transporter solute receptor, unknown | |
NH44784_038541 | 1 | 30 | -7.059826 | Phosphoribosylanthranilate isomerase | |
NH44784_038561 | 3 | 26 | -6.461270 | *Phage integrase | |
NH44784_038571 | 2 | 30 | -5.566550 | hypothetical protein | |
NH44784_038581 | 1 | 27 | -3.893556 | hypothetical protein | |
NH44784_038591 | 1 | 26 | -3.591056 | hypothetical protein |
48 | NH44784_038861 | NH44784_039081 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_038861 | 2 | 15 | -2.996257 | hypothetical protein | |
NH44784_038871 | 1 | 13 | -2.763045 | Coproporphyrinogen III | |
NH44784_038881 | -1 | 12 | -2.575449 | probable two-component response regulator | |
NH44784_038891 | 0 | 13 | -3.100664 | dTDP-4-dehydrorhamnose reductase | |
NH44784_038901 | -3 | 10 | -2.174110 | Threonyl-tRNA synthetase | |
NH44784_038911 | -1 | 9 | -0.929400 | Translation initiation factor 3 | |
NH44784_038921 | 0 | 9 | -0.584480 | Glutathione synthetase | |
NH44784_038931 | 0 | 11 | -0.333873 | PTS system, mannose-specific IIA component | |
NH44784_038941 | -1 | 11 | -0.577967 | phosphocarrier protein HPr | |
NH44784_038951 | -1 | 10 | 1.869287 | Phosphoenolpyruvate-protein phosphotransferase | |
NH44784_038961 | 1 | 10 | 1.092052 | Ammonium transporter | |
NH44784_038971 | 3 | 15 | 1.575254 | Nitrogen regulatory protein P-II | |
NH44784_038981 | 3 | 13 | 0.486975 | hypothetical protein | |
NH44784_038991 | 1 | 9 | 0.557077 | COGs COG2960 | |
NH44784_039001 | 2 | 9 | 0.667950 | MG(2+) CHELATASE FAMILY PROTEIN / ComM-related | |
NH44784_039011 | 3 | 11 | -1.615178 | LSU ribosomal protein L35p | |
NH44784_039021 | 0 | 13 | -1.370406 | LSU ribosomal protein L20p | |
NH44784_039031 | 0 | 13 | -1.117916 | Phenylalanyl-tRNA synthetase alpha chain | |
NH44784_039041 | -1 | 13 | -0.368893 | Phenylalanyl-tRNA synthetase beta chain | |
NH44784_039051 | -1 | 26 | -2.384357 | Integration host factor alpha subunit | |
NH44784_039061 | 1 | 27 | -2.576918 | Transcriptional regulator, MerR family | |
NH44784_039081 | 1 | 27 | -3.182780 | *hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_038881 | HTHFIS | 54 | 8e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_038951 | PHPHTRNFRASE | 570 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_039001 | HTHFIS | 34 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_039051 | DNABINDINGHU | 117 | 2e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. |
49 | NH44784_039211 | NH44784_039361 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_039211 | 1 | 20 | -3.140309 | putative lipoprotein | |
NH44784_039221 | 1 | 21 | -1.680963 | hypothetical protein | |
NH44784_039231 | 2 | 22 | -1.748085 | Transcriptional regulator BkdR of isoleucine and | |
NH44784_039241 | 3 | 19 | -0.307455 | Permease of the drug/metabolite transporter | |
NH44784_039251 | 0 | 13 | -0.311287 | hypothetical protein | |
NH44784_039261 | 0 | 14 | 0.028270 | FIG00431532: hypothetical protein | |
NH44784_039271 | -1 | 14 | 0.488391 | Mannose-6-phosphate isomerase | |
NH44784_039281 | -1 | 13 | 0.292190 | FIG00431487: hypothetical protein | |
NH44784_039291 | -3 | 15 | 0.946662 | transcriptional regulator, LysR-family | |
NH44784_039301 | -2 | 21 | 0.781614 | hypothetical protein | |
NH44784_039311 | -1 | 25 | 2.880889 | putative hydrolase | |
NH44784_039321 | -1 | 26 | 3.054471 | hypothetical protein | |
NH44784_039331 | 1 | 22 | 3.451170 | ABC-type nitrate/sulfonate/bicarbonate transport | |
NH44784_039341 | 2 | 24 | 3.684498 | Alkanesulfonates transport system permease | |
NH44784_039351 | 2 | 20 | 3.830846 | Alkanesulfonates ABC transporter ATP-binding | |
NH44784_039361 | 2 | 13 | 3.276742 | hypothetical protein |
50 | NH44784_039581 | NH44784_039901 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_039581 | -1 | 16 | 3.597694 | Transamidase GatB domain protein | |
NH44784_039591 | 1 | 12 | 4.559244 | FIG138576: 3-oxoacyl-[ACP] synthase | |
NH44784_039601 | 2 | 10 | 5.332340 | 3-oxoacyl-[ACP] reductase | |
NH44784_039611 | 3 | 9 | 5.151842 | 3-hydroxydecanoyl-[ACP] dehydratase | |
NH44784_039621 | 3 | 9 | 5.127755 | 3-oxoacyl-[ACP] synthase | |
NH44784_039631 | 3 | 10 | 4.833074 | FIG085779: Lipoprotein | |
NH44784_039641 | 3 | 11 | 4.750061 | FIG021862: membrane protein, exporter | |
NH44784_039651 | 2 | 11 | 3.584459 | FIG027190: Putative transmembrane protein | |
NH44784_039661 | 1 | 13 | 3.084577 | Lysophospholipid acyltransferase | |
NH44784_039671 | 1 | 13 | 2.712221 | FIG143263: Glycosyl transferase / | |
NH44784_039681 | 1 | 12 | 2.470081 | FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) | |
NH44784_039691 | 1 | 14 | 2.188791 | FIG017861: hypothetical protein | |
NH44784_039701 | 0 | 11 | 1.351754 | Acyl carrier protein | |
NH44784_039711 | 0 | 11 | 2.054472 | Acyl carrier protein (ACP1 | |
NH44784_039721 | 0 | 10 | 2.850418 | FIG018329: 1-acyl-sn-glycerol-3-phosphate | |
NH44784_039731 | 0 | 10 | 2.429627 | 3-oxoacyl-[ACP] synthase | |
NH44784_039741 | 1 | 11 | 3.043964 | 4'-phosphopantetheinyl transferase superfamily | |
NH44784_039751 | 3 | 12 | 2.993769 | Flavohemoprotein (Hemoglobin-like protein) | |
NH44784_039761 | 4 | 14 | 3.266443 | Nitrite-sensitive transcriptional repressor | |
NH44784_039771 | 4 | 15 | 3.525667 | D-amino acid dehydrogenase small subunit | |
NH44784_039781 | 3 | 15 | 4.449276 | Permease of the drug/metabolite transporter | |
NH44784_039791 | 2 | 16 | 5.601372 | Proline dehydrogenase | |
NH44784_039801 | 2 | 16 | 5.374595 | Transcriptional regulator, AraC family | |
NH44784_039811 | 2 | 17 | 4.922247 | Hydrolases of the alpha/beta superfamily | |
NH44784_039821 | 3 | 18 | 5.416412 | Glycine cleavage system transcriptional | |
NH44784_039831 | 0 | 17 | 5.358100 | Permeases of the major facilitator superfamily | |
NH44784_039841 | -1 | 19 | 4.125527 | Probable transcriptional regulator lrhA | |
NH44784_039851 | 0 | 21 | 4.194892 | putative lysR-family transcriptional regulator | |
NH44784_039861 | 0 | 20 | 4.088101 | hypothetical protein | |
NH44784_039871 | 1 | 17 | 4.260251 | Glutathione S-transferase, unnamed subgroup | |
NH44784_039881 | -1 | 12 | 3.789148 | Phenylacetate-CoA oxygenase/reductase, PaaK | |
NH44784_039891 | 0 | 13 | 3.555377 | Transcriptional regulator, HxlR family | |
NH44784_039901 | 0 | 13 | 3.248275 | Permeases of the major facilitator superfamily |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_039581 | IGASERPTASE | 32 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_039601 | DHBDHDRGNASE | 102 | 2e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_039641 | ACRIFLAVINRP | 41 | 3e-05 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_039831 | TCRTETA | 34 | 8e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_039901 | TCRTETB | 37 | 1e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
51 | NH44784_040071 | NH44784_040221 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_040071 | 2 | 13 | 3.684251 | COG1801: Uncharacterized conserved protein | |
NH44784_040081 | 3 | 15 | 3.577917 | Putative threonine efflux protein | |
NH44784_040091 | 2 | 13 | 3.963303 | Transcriptional regulator, GntR family domain / | |
NH44784_040101 | 3 | 14 | 3.302617 | GNAT family acetyltransferase PA5433 | |
NH44784_040111 | 3 | 14 | 3.715821 | Permease of the drug/metabolite transporter | |
NH44784_040121 | 2 | 16 | 3.517479 | Permease of the drug/metabolite transporter | |
NH44784_040131 | 1 | 15 | 3.304328 | putative thioredoxin | |
NH44784_040141 | 1 | 15 | 3.216834 | N-carbamoyl-L-amino acid hydrolase | |
NH44784_040151 | -1 | 13 | 2.420657 | Na+-driven multidrug efflux pump | |
NH44784_040161 | -3 | 13 | 2.121377 | Methylglutaconyl-CoA hydratase | |
NH44784_040171 | -2 | 16 | 2.061815 | Citronellol and citronellal dehydrogenase | |
NH44784_040181 | -2 | 16 | 1.821392 | Predicted transcriptional regulator LiuQ of | |
NH44784_040191 | -1 | 17 | 2.137351 | Acetyl-coenzyme A synthetase | |
NH44784_040201 | -1 | 18 | 2.761132 | Phosphoenolpyruvate carboxykinase [GTP] | |
NH44784_040211 | -1 | 16 | 3.236468 | SAM-dependent methyltransferases | |
NH44784_040221 | -3 | 14 | 3.088814 | short-chain dehydrogenase/reductase SDR |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_040171 | DHBDHDRGNASE | 107 | 9e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_040181 | HTHTETR | 77 | 4e-19 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_040221 | DHBDHDRGNASE | 108 | 1e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
52 | NH44784_040381 | NH44784_040671 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_040381 | 2 | 17 | -3.270355 | hypothetical protein | |
NH44784_040391 | 0 | 22 | -3.946259 | ferripyoverdine receptor | |
NH44784_040401 | 0 | 23 | -3.085774 | Fe2+-dicitrate sensor, membrane component | |
NH44784_040411 | 1 | 24 | -4.421562 | heme uptake regulator | |
NH44784_040421 | 2 | 23 | -2.330745 | hypothetical protein | |
NH44784_040431 | 1 | 19 | -0.271289 | hypothetical protein | |
NH44784_040441 | -1 | 16 | 1.652533 | Ribose 5-phosphate isomerase B | |
NH44784_040451 | -2 | 10 | 3.255625 | Pirin | |
NH44784_040461 | 0 | 11 | 4.034797 | G:T/U mismatch-specific uracil/thymine | |
NH44784_040471 | 0 | 10 | 4.288262 | Cytochrome c heme lyase subunit CcmH | |
NH44784_040481 | 1 | 11 | 3.817172 | Cytochrome c heme lyase subunit CcmL | |
NH44784_040491 | 1 | 11 | 3.154622 | Cytochrome c-type biogenesis protein | |
NH44784_040501 | 2 | 10 | 3.254559 | Cytochrome c heme lyase subunit CcmF | |
NH44784_040511 | 0 | 9 | 1.391587 | Cytochrome c-type biogenesis protein CcmE, heme | |
NH44784_040521 | -3 | 8 | -0.515277 | cytochrome c biogenesis protein | |
NH44784_040531 | -2 | 10 | -0.750140 | Cytochrome c-type biogenesis protein | |
NH44784_040541 | -2 | 9 | -1.318248 | ABC transporter involved in cytochrome c | |
NH44784_040551 | -2 | 8 | -0.900399 | ABC transporter involved in cytochrome c | |
NH44784_040561 | -2 | 8 | 0.134983 | Cytochrome c-type protein NapC | |
NH44784_040571 | -1 | 7 | 1.605233 | Trimethylamine-N-oxide reductase | |
NH44784_040581 | 0 | 7 | 3.244123 | Chaperone protein TorD | |
NH44784_040591 | 0 | 9 | 3.374961 | Tetrathionate reductase subunit B | |
NH44784_040601 | 2 | 12 | 3.955982 | Tetrathionate reductase subunit C | |
NH44784_040611 | 1 | 12 | 3.945463 | Tetrathionate reductase subunit A | |
NH44784_040621 | 5 | 13 | 4.734058 | Cytochrome c heme lyase subunit CcmH | |
NH44784_040631 | 5 | 15 | 3.744418 | Cytochrome c heme lyase subunit CcmL | |
NH44784_040641 | 6 | 17 | 4.027729 | Cytochrome c-type biogenesis protein | |
NH44784_040651 | 7 | 18 | 5.186239 | Cytochrome c heme lyase subunit CcmF | |
NH44784_040661 | 4 | 15 | 3.679610 | Cytochrome c-type biogenesis protein CcmE, heme | |
NH44784_040671 | 3 | 14 | 2.744289 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_040401 | PRTACTNFAMLY | 28 | 0.049 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_040431 | SYCDCHAPRONE | 35 | 1e-04 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_040561 | TCRTETA | 30 | 0.022 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_040621 | SYCDCHAPRONE | 31 | 0.007 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD |
53 | NH44784_040971 | NH44784_041091 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_040971 | 3 | 14 | 3.713665 | Transcriptional Regulator, AraC family | |
NH44784_040981 | 2 | 13 | 3.917488 | putative streptomycin phosphotransferase | |
NH44784_040991 | 2 | 15 | 3.158504 | ADP-ribose pyrophosphatase | |
NH44784_041001 | 4 | 16 | 3.008484 | Transcriptional regulator, TetR family | |
NH44784_041011 | 3 | 14 | 2.406154 | Tetracycline efflux protein TetA | |
NH44784_041021 | 0 | 14 | 0.966407 | transcriptional regulator, LysR-family | |
NH44784_041031 | -1 | 13 | 1.984682 | Ribulose-5-phosphate 4-epimerase and related | |
NH44784_041041 | -1 | 13 | 2.174706 | major facilitator superfamily MFS_1 | |
NH44784_041051 | -1 | 13 | 2.029261 | 2-hydroxychromene-2-carboxylate isomerase | |
NH44784_041061 | -2 | 13 | 1.999807 | Leucine-, isoleucine-, valine-, threonine-, and | |
NH44784_041071 | -1 | 11 | 2.987980 | putative transcriptional regulator | |
NH44784_041081 | -1 | 12 | 3.717884 | Long-chain-fatty-acid--CoA ligase | |
NH44784_041091 | -1 | 12 | 3.359339 | putative cyclase SCIF3.09c |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041001 | TETREPRESSOR | 257 | 5e-90 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041011 | TCRTETA | 387 | e-135 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041041 | TCRTETB | 31 | 0.007 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
54 | NH44784_041241 | NH44784_041561 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_041241 | 0 | 20 | 3.247074 | Long-chain-fatty-acid--CoA ligase | |
NH44784_041251 | -2 | 16 | 1.917982 | Gluconate 5-dehydrogenase | |
NH44784_041261 | 0 | 11 | 2.799661 | hypothetical protein | |
NH44784_041271 | 0 | 11 | 3.092796 | FIG01027227: hypothetical protein | |
NH44784_041281 | 0 | 11 | 3.105324 | hypothetical protein | |
NH44784_041291 | 0 | 11 | 3.092603 | transcriptional regulator, LysR-family | |
NH44784_041301 | 0 | 13 | 2.810682 | Penicillin G acylase precursor | |
NH44784_041311 | 1 | 12 | 3.850093 | Transport ATP-binding protein CydCD | |
NH44784_041321 | 1 | 10 | 4.025843 | transcriptional regulator, LysR family | |
NH44784_041331 | 2 | 12 | 4.179393 | Sarcosine oxidase beta subunit | |
NH44784_041341 | 2 | 12 | 3.917754 | transcriptional regulator, LysR family | |
NH44784_041351 | 3 | 13 | 3.833019 | N-formylglutamate deformylase | |
NH44784_041361 | 4 | 14 | 4.382734 | Transcriptional regulator, LysR family | |
NH44784_041371 | 3 | 16 | 3.954554 | Transcription regulatory protein opdE | |
NH44784_041381 | 0 | 13 | 2.218817 | Major facilitator family transporter | |
NH44784_041391 | -1 | 10 | 2.636030 | transcriptional regulator, TetR family | |
NH44784_041401 | -2 | 9 | 3.566094 | hypothetical protein | |
NH44784_041411 | -2 | 7 | 3.044720 | Methyltransferase | |
NH44784_041421 | -1 | 6 | 2.524170 | LacI family transcriptional regulator | |
NH44784_041431 | -1 | 5 | 2.460156 | D-galactonate transporter | |
NH44784_041441 | -1 | 6 | 3.364288 | Aspartyl-tRNA(Asn) amidotransferase subunit A | |
NH44784_041451 | 0 | 8 | 1.952080 | hypothetical protein | |
NH44784_041461 | 0 | 16 | 0.036743 | Multiple antibiotic resistance protein MarC | |
NH44784_041471 | -1 | 15 | -0.076698 | hypothetical protein | |
NH44784_041481 | 0 | 22 | -2.160118 | hypothetical protein | |
NH44784_041491 | -1 | 21 | -2.704867 | DUF1275 domain-containing protein | |
NH44784_041501 | 0 | 25 | -3.905794 | hypothetical protein | |
NH44784_041511 | -1 | 24 | -5.404182 | Methyltransferase type 12 | |
NH44784_041521 | -2 | 24 | -5.963060 | hypothetical protein | |
NH44784_041531 | -1 | 27 | -4.588416 | hypothetical protein | |
NH44784_041541 | 1 | 20 | -2.721068 | hypothetical protein | |
NH44784_041551 | 0 | 22 | -2.756287 | hypothetical protein | |
NH44784_041561 | -1 | 20 | -3.858909 | Archaeal seryl-tRNA synthetase-related sequence |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041251 | DHBDHDRGNASE | 128 | 4e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041281 | ACRIFLAVINRP | 28 | 0.009 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041371 | TCRTETB | 38 | 6e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041381 | TCRTETB | 36 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041391 | HTHTETR | 77 | 6e-20 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041431 | TCRTETA | 44 | 5e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041451 | IGASERPTASE | 38 | 7e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
55 | NH44784_041951 | NH44784_042001 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_041951 | 1 | 13 | 5.752317 | hypothetical protein | |
NH44784_041961 | 3 | 13 | 5.525225 | General secretion pathway protein N | |
NH44784_041971 | 1 | 14 | 4.902771 | type II secretion system protein M (XcpZ-2); | |
NH44784_041981 | 0 | 13 | 4.090131 | General secretion pathway protein L | |
NH44784_041991 | 0 | 12 | 4.584403 | General secretion pathway protein K | |
NH44784_042001 | -2 | 11 | 3.306057 | General secretion pathway protein J |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042001 | PilS_PF08805 | 31 | 0.003 | PilS N terminal | |
>PilS_PF08805#PilS N terminal |
56 | NH44784_042351 | NH44784_042911 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_042351 | 2 | 20 | -1.813370 | Nitrogen regulation protein NR(I | |
NH44784_042361 | 1 | 18 | -1.332038 | tw-component sensor kinase | |
NH44784_042371 | 3 | 20 | -1.376123 | Pyruvate dehydrogenase E1 component | |
NH44784_042381 | 2 | 15 | 0.587729 | Dihydrolipoamide acetyltransferase component of | |
NH44784_042391 | 3 | 17 | -0.384357 | Dihydrolipoamide dehydrogenase of pyruvate | |
NH44784_042401 | 3 | 15 | -0.745354 | Dehydrogenases with different specificities | |
NH44784_042411 | 3 | 17 | -1.697815 | LysR family transcriptional regulator PA2877 | |
NH44784_042421 | 2 | 18 | -2.312763 | hypothetical protein | |
NH44784_042431 | 1 | 19 | -2.683144 | hypothetical protein | |
NH44784_042441 | 1 | 21 | -4.402214 | Flagellar biosynthesis protein FliC | |
NH44784_042451 | 0 | 18 | -5.006270 | hypothetical protein | |
NH44784_042461 | 0 | 14 | -4.564932 | Methyltransferase | |
NH44784_042471 | 0 | 14 | -3.990126 | RNA polymerase sigma factor for flagellar | |
NH44784_042481 | -2 | 10 | -3.012415 | Flagellar transcriptional activator FlhD | |
NH44784_042491 | -1 | 9 | -2.923527 | Flagellar transcriptional activator FlhC | |
NH44784_042501 | 0 | 9 | -2.466733 | Flagellar motor rotation protein MotA | |
NH44784_042511 | 2 | 8 | -2.179754 | Flagellar motor rotation protein MotB | |
NH44784_042521 | 1 | 10 | -1.655803 | Chemotaxis regulator-transmits chemoreceptor | |
NH44784_042531 | 2 | 10 | -1.836233 | Signal transduction histidine kinase CheA | |
NH44784_042541 | 2 | 11 | -2.232316 | Positive regulator of CheA protein activity | |
NH44784_042551 | 1 | 14 | -0.884418 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_042561 | -1 | 13 | -0.758274 | Chemotaxis protein methyltransferase CheR | |
NH44784_042571 | 1 | 10 | -0.151298 | Chemotaxis response regulator protein-glutamate | |
NH44784_042581 | 1 | 11 | 1.415812 | Chemotaxis regulator-transmits chemoreceptor | |
NH44784_042591 | 1 | 10 | 1.739194 | Chemotaxis response-phosphatase CheZ | |
NH44784_042601 | 1 | 10 | 1.941102 | methyl-accepting chemotaxis sensory transducer | |
NH44784_042611 | 1 | 8 | 2.111555 | Flagellar biosynthesis protein FlhB | |
NH44784_042621 | 2 | 8 | 2.221663 | Flagellar biosynthesis protein FlhA | |
NH44784_042631 | 1 | 10 | 2.817483 | Flagellar biosynthesis protein FlhF | |
NH44784_042641 | -2 | 13 | -0.851893 | Flagellar biosynthesis protein FlgN | |
NH44784_042651 | 1 | 14 | -1.375936 | Negative regulator of flagellin synthesis FlgM | |
NH44784_042661 | 2 | 11 | -1.358774 | Flagellar basal-body P-ring formation protein | |
NH44784_042671 | 3 | 13 | -2.220199 | Flagellar basal-body rod protein FlgB | |
NH44784_042681 | 4 | 14 | -2.033990 | Flagellar basal-body rod protein FlgC | |
NH44784_042691 | 4 | 13 | -1.590858 | Flagellar basal-body rod modification protein | |
NH44784_042701 | 2 | 13 | -1.391229 | Flagellar hook protein FlgE | |
NH44784_042711 | 1 | 12 | -1.744601 | Flagellar basal-body rod protein FlgF | |
NH44784_042721 | 2 | 12 | -2.091452 | Flagellar basal-body rod protein FlgG | |
NH44784_042731 | 1 | 10 | -2.266215 | Flagellar L-ring protein FlgH | |
NH44784_042741 | 0 | 9 | -2.059469 | Flagellar P-ring protein FlgI | |
NH44784_042751 | 0 | 10 | -1.530027 | Flagellar protein FlgJ [peptidoglycan | |
NH44784_042761 | 1 | 11 | -1.439947 | Flagellar hook-associated protein FlgK | |
NH44784_042771 | 2 | 16 | -0.807102 | Flagellar hook-associated protein FlgL | |
NH44784_042781 | 3 | 16 | -0.593506 | hypothetical protein | |
NH44784_042791 | 2 | 13 | -0.433960 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_042801 | 1 | 13 | -0.166695 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_042811 | -1 | 11 | -1.246167 | putative lipoprotein | |
NH44784_042821 | 0 | 12 | -1.162519 | hypothetical protein | |
NH44784_042831 | 1 | 12 | -1.006851 | Aerotaxis sensor receptor protein | |
NH44784_042841 | 2 | 12 | -0.382908 | methyl-accepting chemotaxis protein | |
NH44784_042851 | 1 | 15 | -1.372433 | Flagellar biosynthesis protein FliR | |
NH44784_042861 | 0 | 15 | -1.137423 | Flagellar biosynthesis protein FliQ | |
NH44784_042871 | -2 | 14 | -0.822705 | Flagellar biosynthesis protein FliP | |
NH44784_042881 | 0 | 15 | 1.827884 | Flagellar biosynthesis protein FliQ | |
NH44784_042891 | 0 | 15 | 1.080802 | Flagellar motor switch protein FliN | |
NH44784_042901 | -1 | 15 | 1.545475 | Flagellar motor switch protein FliM | |
NH44784_042911 | -1 | 17 | 3.250466 | Flagellar biosynthesis protein FliL |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042351 | HTHFIS | 117 | 5e-33 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042381 | IGASERPTASE | 38 | 1e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042391 | RTXTOXIND | 34 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042401 | DHBDHDRGNASE | 70 | 2e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042431 | IGASERPTASE | 33 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042441 | FLAGELLIN | 217 | 3e-66 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042501 | ACRIFLAVINRP | 37 | 1e-04 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042511 | OMPADOMAIN | 44 | 4e-07 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042521 | HTHFIS | 81 | 3e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042531 | PF06580 | 43 | 2e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042571 | HTHFIS | 53 | 6e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042581 | HTHFIS | 85 | 2e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042601 | CHANLCOLICIN | 30 | 0.026 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042611 | TYPE3IMSPROT | 366 | e-128 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042631 | PF03544 | 40 | 3e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042681 | FLGHOOKAP1 | 30 | 0.004 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042701 | FLGHOOKAP1 | 43 | 2e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042721 | FLGHOOKAP1 | 42 | 1e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042731 | FLGLRINGFLGH | 197 | 3e-66 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042741 | FLGPRINGFLGI | 381 | e-134 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042751 | FLGFLGJ | 226 | 9e-75 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042761 | FLGHOOKAP1 | 327 | e-108 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042771 | FLAGELLIN | 44 | 9e-07 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042791 | PF03544 | 33 | 0.002 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042801 | PF05272 | 35 | 7e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042851 | TYPE3IMRPROT | 167 | 3e-53 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042861 | TYPE3IMQPROT | 60 | 8e-16 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042871 | FLGBIOSNFLIP | 287 | e-100 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042891 | FLGMOTORFLIN | 143 | 2e-46 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042901 | FLGMOTORFLIM | 272 | 4e-92 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. |
57 | NH44784_043211 | NH44784_043331 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_043211 | 3 | 20 | -3.678276 | Methionine aminopeptidase | |
NH44784_043221 | 2 | 16 | -2.766506 | SSU ribosomal protein S2p (SAe | |
NH44784_043231 | 0 | 10 | -1.263620 | Translation elongation factor Ts | |
NH44784_043241 | 0 | 12 | -0.849708 | Uridylate kinase | |
NH44784_043251 | 1 | 11 | -1.968261 | Ribosome recycling factor | |
NH44784_043261 | 1 | 11 | -2.239379 | Undecaprenyl pyrophosphate synthetase | |
NH44784_043271 | 2 | 12 | -2.129201 | Phosphatidate cytidylyltransferase | |
NH44784_043281 | 3 | 12 | -2.856025 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | |
NH44784_043291 | 3 | 12 | -3.277875 | Membrane-associated zinc metalloprotease | |
NH44784_043301 | 2 | 11 | -3.068670 | Outer membrane protein assembly factor YaeT | |
NH44784_043311 | -1 | 12 | -1.065548 | Outer membrane chaperone Skp (OmpH) precursor @ | |
NH44784_043321 | 1 | 12 | 0.596630 | UDP-3-O-[3-hydroxymyristoyl] glucosamine | |
NH44784_043331 | 2 | 11 | 0.744845 | (3R)-hydroxymyristoyl-[acyl carrier protein] |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_043241 | CARBMTKINASE | 28 | 0.025 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. |
58 | NH44784_043761 | NH44784_044041 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_043761 | 0 | 10 | 3.234900 | Leucine-responsive regulatory protein, regulator | |
NH44784_043771 | 2 | 11 | 4.325150 | Glutathione peroxidase | |
NH44784_043781 | 4 | 12 | 4.865056 | Major facilitator superfamily (MFS_1) | |
NH44784_043791 | 2 | 10 | 4.453296 | FOG: TPR repeat | |
NH44784_043801 | 2 | 9 | 4.745207 | Transcriptional regulator | |
NH44784_043811 | 3 | 10 | 4.281372 | Probable pyrodoxal phosphate biosynthesis | |
NH44784_043821 | 2 | 11 | 3.492249 | 4-hydroxythreonine-4-phosphate dehydrogenase | |
NH44784_043831 | 0 | 11 | 3.161004 | 4-hydroxythreonine-4-phosphate dehydrogenase | |
NH44784_043841 | 1 | 10 | 2.675837 | methyl-accepting chemotaxis protein | |
NH44784_043851 | 3 | 12 | 2.425238 | Deoxyribodipyrimidine photolyase | |
NH44784_043861 | 3 | 12 | 1.478638 | CAIB/BAIF family protein | |
NH44784_043871 | 4 | 16 | -0.008254 | Alkyl hydroperoxide reductase subunit C-like | |
NH44784_043881 | 3 | 15 | 0.659002 | Exonuclease SbcC | |
NH44784_043891 | 1 | 15 | 0.505441 | hypothetical protein | |
NH44784_043901 | 0 | 15 | 0.587987 | hypothetical protein | |
NH44784_043911 | -1 | 14 | 0.890803 | Hypothetical protein YaeJ with similarity to | |
NH44784_043921 | 2 | 12 | 1.654112 | Transcriptional regulator, ArsR family | |
NH44784_043931 | 1 | 10 | 3.709211 | N-ethylmaleimide reductase | |
NH44784_043941 | 3 | 12 | 4.005029 | CAAX amino terminal protease family protein | |
NH44784_043951 | 1 | 14 | 3.692656 | probable membrane protein NMA1176 | |
NH44784_043961 | 0 | 12 | 4.877557 | hypothetical protein | |
NH44784_043971 | -1 | 9 | 3.979382 | COG3332 | |
NH44784_043981 | 0 | 10 | 3.551286 | integral membrane protein | |
NH44784_043991 | 0 | 12 | 3.198353 | Putative uncharacterized protein YeaK | |
NH44784_044001 | 1 | 12 | 3.562414 | two-component response regulator | |
NH44784_044011 | 1 | 11 | 3.170055 | Outer membrane component of tripartite multidrug | |
NH44784_044021 | 0 | 10 | 1.873242 | ABC-type multidrug transport system, permease | |
NH44784_044031 | -2 | 9 | 2.640520 | ABC-type multidrug transport system, ATPase | |
NH44784_044041 | 0 | 9 | 3.117779 | Predicted membrane fusion protein (MFP) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_043781 | TCRTETB | 46 | 2e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_043801 | RTXTOXINC | 28 | 0.029 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_043831 | FLGMOTORFLIM | 32 | 0.002 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_043881 | PF03544 | 34 | 0.001 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_044021 | ABC2TRNSPORT | 45 | 2e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_044041 | RTXTOXIND | 53 | 7e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
59 | NH44784_044381 | NH44784_044471 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_044381 | 2 | 11 | 3.627055 | D-amino acid dehydrogenase small subunit | |
NH44784_044391 | 4 | 11 | 3.891680 | DNA double-strand break repair protein Mre11 | |
NH44784_044401 | 4 | 11 | 3.253262 | DNA double-strand break repair Rad50 ATPase | |
NH44784_044411 | 3 | 16 | -0.197803 | hypothetical protein | |
NH44784_044421 | 2 | 11 | 0.572687 | Permease of the drug/metabolite transporter | |
NH44784_044431 | 1 | 13 | 0.459107 | hypothetical protein | |
NH44784_044441 | 0 | 12 | 0.503637 | hypothetical protein | |
NH44784_044451 | 0 | 12 | 0.209697 | hypothetical protein | |
NH44784_044461 | 1 | 13 | -0.077561 | hypothetical protein | |
NH44784_044471 | 3 | 15 | 0.691702 | Na(+) H(+) antiporter subunit A; Na(+) H(+) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_044401 | RTXTOXIND | 38 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
60 | NH44784_046311 | NH44784_046421 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_046311 | 0 | 14 | 3.088206 | hypothetical protein | |
NH44784_046321 | 0 | 12 | 3.022783 | hypothetical protein | |
NH44784_046331 | 1 | 15 | 2.551701 | hypothetical protein | |
NH44784_046341 | 0 | 17 | 1.601844 | hypothetical protein | |
NH44784_046351 | 0 | 15 | 1.275020 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_046361 | 0 | 15 | 0.912463 | hypothetical protein | |
NH44784_046371 | 2 | 15 | 1.904336 | hypothetical protein | |
NH44784_046381 | 2 | 16 | 1.773381 | DNA topoisomerase IB (poxvirus type | |
NH44784_046391 | 1 | 13 | 1.831730 | ThiJ/PfpI family protein | |
NH44784_046401 | 1 | 11 | 3.013488 | hypothetical protein | |
NH44784_046411 | 0 | 11 | 2.624733 | hypothetical protein | |
NH44784_046421 | 2 | 10 | 2.916898 | PepSY-associated TM helix domain protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046341 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046351 | DHBDHDRGNASE | 97 | 7e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046401 | PRTACTNFAMLY | 27 | 0.003 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046411 | PF06580 | 24 | 0.043 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
61 | NH44784_046591 | NH44784_047251 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_046591 | 2 | 12 | 2.588575 | Sensory histidine kinase in two-component | |
NH44784_046601 | 4 | 13 | 3.673479 | hypothetical protein | |
NH44784_046611 | 4 | 12 | 3.796066 | Chromate transport protein ChrA | |
NH44784_046621 | 4 | 10 | 2.104728 | Enoyl-CoA hydratase | |
NH44784_046631 | 5 | 11 | 1.954144 | transcriptional regulator, LysR family | |
NH44784_046641 | 3 | 11 | 1.034179 | Integral membrane protein | |
NH44784_046651 | 2 | 12 | 0.533338 | drug resistance transporter, Bcr/CflA subfamily | |
NH44784_046661 | 1 | 12 | 0.840849 | hypothetical protein | |
NH44784_046671 | 2 | 13 | 2.502921 | Tricarboxylate transport membrane protein TctA | |
NH44784_046681 | 4 | 17 | 4.830467 | Tricarboxylate transport protein TctB | |
NH44784_046691 | 3 | 19 | 5.319339 | hypothetical protein | |
NH44784_046701 | 2 | 13 | 4.875290 | General secretion pathway protein G | |
NH44784_046711 | 2 | 13 | 5.034201 | General secretion pathway protein K | |
NH44784_046721 | -1 | 10 | 3.691753 | General secretion pathway protein L | |
NH44784_046731 | -1 | 9 | -0.019204 | General secretion pathway protein M | |
NH44784_046741 | -1 | 12 | -0.960138 | hypothetical protein | |
NH44784_046751 | -1 | 12 | -1.111840 | General secretion pathway protein E | |
NH44784_046761 | -1 | 10 | 1.867218 | General secretion pathway protein F | |
NH44784_046771 | 0 | 11 | 1.729936 | Phosphate-binding DING protein (related to PstS | |
NH44784_046781 | 0 | 12 | 1.852157 | Phosphate-binding DING protein (related to PstS) | |
NH44784_046791 | 0 | 11 | 3.089983 | Phosphate-binding DING protein (related to PstS) | |
NH44784_046801 | 0 | 11 | 3.348162 | hypothetical protein | |
NH44784_046811 | 0 | 11 | 3.265096 | Filamentous haemagglutinin family outer membrane | |
NH44784_046821 | 0 | 12 | 2.340310 | hypothetical protein | |
NH44784_046831 | 0 | 14 | 2.966134 | Extracytoplasmic function (ECF) sigma factor | |
NH44784_046841 | 0 | 15 | 3.658722 | Sigma factor regulator VreR (cytoplasmic | |
NH44784_046851 | 4 | 18 | 3.550420 | Transposase | |
NH44784_046861 | 4 | 18 | 4.883610 | Transposase and inactivated derivatives | |
NH44784_046871 | 2 | 17 | 4.886376 | RNA polymerase sigma-70 factor, ECF subfamily | |
NH44784_046881 | 1 | 17 | 4.575913 | General secretion pathway protein H | |
NH44784_046891 | 2 | 15 | 3.876204 | General secretion pathway protein I | |
NH44784_046901 | 3 | 16 | 3.231405 | General secretion pathway protein J | |
NH44784_046911 | 6 | 17 | 1.883329 | hypothetical protein | |
NH44784_046921 | 3 | 14 | 0.217169 | COGs COG3558 | |
NH44784_046931 | 4 | 15 | -0.011346 | Transcriptional regulator, TetR family | |
NH44784_046941 | 3 | 15 | -0.576550 | hypothetical protein | |
NH44784_046951 | 2 | 17 | -0.650078 | hypothetical protein | |
NH44784_046961 | -1 | 14 | -0.387883 | hypothetical protein | |
NH44784_046971 | 1 | 15 | 1.010783 | diguanylate cyclase (GGDEF domain | |
NH44784_046981 | -1 | 15 | 1.134683 | Redox-sensitive transcriptional activator SoxR | |
NH44784_046991 | 0 | 15 | 2.115215 | hypothetical protein | |
NH44784_047001 | 0 | 16 | 1.994414 | hypothetical protein | |
NH44784_047011 | 0 | 16 | 3.285835 | GGDEF family protein | |
NH44784_047021 | 0 | 17 | 4.029612 | Phage-related integrase | |
NH44784_047031 | 0 | 16 | 2.938012 | hypothetical protein | |
NH44784_047041 | 0 | 16 | 2.633403 | hypothetical protein | |
NH44784_047051 | 0 | 14 | 2.521345 | hypothetical protein | |
NH44784_047061 | -1 | 12 | 2.930258 | FIG00456855: hypothetical protein | |
NH44784_047071 | -1 | 12 | 1.864223 | ABC-type nitrate/sulfonate/bicarbonate transport | |
NH44784_047081 | 0 | 14 | 1.742776 | FIG00905417: hypothetical protein | |
NH44784_047091 | 1 | 12 | 3.438842 | putative taurine-binding periplasmic protein | |
NH44784_047101 | -1 | 13 | 4.384922 | Threonine dehydratase, catabolic | |
NH44784_047111 | -1 | 15 | 4.019408 | hypothetical protein | |
NH44784_047121 | 1 | 15 | 4.389021 | FIG00538434: hypothetical protein | |
NH44784_047131 | 3 | 10 | 4.004466 | hypothetical protein | |
NH44784_047141 | 3 | 9 | 3.977812 | Carboxyl-terminal protease | |
NH44784_047151 | 4 | 9 | 2.764574 | hypothetical protein | |
NH44784_047161 | 4 | 10 | 2.062132 | hypothetical protein | |
NH44784_047171 | 3 | 10 | 2.114749 | FIG00770418: hypothetical protein | |
NH44784_047181 | 2 | 14 | 1.912394 | hypothetical protein | |
NH44784_047191 | 0 | 15 | 2.393840 | tRNA pseudouridine synthase A | |
NH44784_047201 | 0 | 15 | 2.146880 | Muramoyltetrapeptide carboxypeptidase | |
NH44784_047211 | -1 | 12 | 2.101412 | hypothetical protein | |
NH44784_047221 | 0 | 13 | 2.630109 | hypothetical protein | |
NH44784_047231 | 0 | 12 | 2.829675 | amino acid transporter | |
NH44784_047241 | 1 | 14 | 2.232036 | hypothetical protein | |
NH44784_047251 | 2 | 16 | 1.709628 | transcriptional regulator, XRE family with cupin |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046651 | TCRTETA | 52 | 2e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046701 | BCTERIALGSPG | 175 | 1e-59 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046761 | BCTERIALGSPF | 352 | e-121 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046811 | PF05860 | 62 | 5e-13 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046821 | TONBPROTEIN | 30 | 0.008 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046881 | BCTERIALGSPH | 47 | 4e-09 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046891 | PilS_PF08805 | 31 | 0.001 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046901 | PF05946 | 32 | 0.001 | Toxin-coregulated pilus subunit TcpA | |
>PF05946#Toxin-coregulated pilus subunit TcpA | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046931 | HTHTETR | 69 | 8e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046981 | HTHTETR | 27 | 0.020 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_047041 | cloacin | 27 | 0.018 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_047171 | RTXTOXIND | 38 | 7e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
62 | NH44784_048071 | NH44784_048231 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_048071 | 3 | 12 | 3.425462 | Alkanesulfonates transport system permease | |
NH44784_048081 | 3 | 12 | 3.400935 | Alkanesulfonates transport system permease | |
NH44784_048091 | 4 | 12 | 4.126395 | Alkanesulfonates ABC transporter ATP-binding | |
NH44784_048101 | 3 | 11 | 4.091362 | Nitrilotriacetate monooxygenase component A | |
NH44784_048111 | 7 | 13 | 5.806924 | GMP synthase [glutamine-hydrolyzing] | |
NH44784_048121 | 6 | 12 | 5.133034 | L-lactate permease | |
NH44784_048131 | 3 | 18 | 3.654740 | hypothetical protein | |
NH44784_048141 | 2 | 13 | 3.175789 | Copper resistance protein D | |
NH44784_048151 | 1 | 10 | 2.420882 | Protein yobA precursor | |
NH44784_048161 | -2 | 10 | 2.236593 | hypothetical protein | |
NH44784_048171 | -2 | 11 | 2.411648 | ProQ activator of osmoprotectant transporter | |
NH44784_048181 | -2 | 10 | 2.723910 | hypothetical protein | |
NH44784_048191 | -2 | 9 | 2.974921 | Gluconolactonase | |
NH44784_048201 | -2 | 9 | 3.206279 | D-galactarate dehydratase | |
NH44784_048211 | -2 | 9 | 3.413876 | 5-dehydro-4-deoxyglucarate dehydratase | |
NH44784_048221 | -1 | 9 | 3.763029 | Ketoglutarate semialdehyde dehydrogenase | |
NH44784_048231 | 1 | 8 | 3.297396 | two-component system sensor protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048131 | ALARACEMASE | 26 | 0.018 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. |
63 | NH44784_048331 | NH44784_048651 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_048331 | 2 | 12 | -0.397831 | YbbM seven transmembrane helix protein | |
NH44784_048341 | 0 | 14 | -0.925711 | YbbL ABC transporter ATP-binding protein | |
NH44784_048351 | 0 | 14 | -0.992151 | Siderophore [Alcaligin] biosynthetic enzyme | |
NH44784_048361 | 0 | 12 | 0.366256 | alcaligin biosynthesis protein | |
NH44784_048371 | 1 | 12 | -0.185085 | Siderophore [Alcaligin] biosynthesis | |
NH44784_048381 | 0 | 10 | 1.203427 | Putative iron reductase in siderophore | |
NH44784_048391 | 1 | 8 | 1.765880 | Iron-sulfur protein in siderophore [Alcaligin] | |
NH44784_048401 | 2 | 7 | 3.010522 | Transcriptional regulator AlcR in siderophore | |
NH44784_048411 | 2 | 7 | 3.410108 | Siderophore [Alcaligin] translocase AlcS | |
NH44784_048421 | 0 | 8 | 2.806555 | Iron-siderophore [Alcaligin] receptor @ | |
NH44784_048431 | 5 | 11 | 3.993880 | Iron-siderophore [Alcaligin-like] transport | |
NH44784_048441 | 2 | 10 | 2.457280 | transport system permease protein | |
NH44784_048451 | 0 | 10 | 2.530107 | hypothetical protein | |
NH44784_048461 | -2 | 10 | 2.020131 | Ferric enterobactin transport ATP-binding | |
NH44784_048471 | -2 | 10 | 1.852665 | Glutamate transport ATP-binding protein | |
NH44784_048481 | 0 | 11 | 3.341856 | ABC transporter membrane-spanning | |
NH44784_048491 | 0 | 11 | 3.455580 | Amino acid ABC transporter, amino acid-binding | |
NH44784_048501 | 0 | 15 | 4.368310 | Enoyl-[acyl-carrier-protein] reductase [FMN] | |
NH44784_048511 | 1 | 14 | 3.564192 | putative thiol:disulfide interchange protein | |
NH44784_048521 | 0 | 14 | 3.059295 | hypothetical protein | |
NH44784_048531 | 1 | 14 | 2.654138 | FIG00460718: hypothetical protein | |
NH44784_048541 | 1 | 11 | 2.535113 | Permeases of the major facilitator superfamily | |
NH44784_048551 | 1 | 10 | 3.140378 | Long-chain-fatty-acid--CoA ligase | |
NH44784_048561 | 1 | 10 | 2.968670 | LysR-type transcriptional regulator NahR | |
NH44784_048571 | 1 | 9 | 3.149140 | Metallo-beta-lactamase superfamily protein | |
NH44784_048581 | 3 | 10 | 4.036532 | N-acetyl-gamma-glutamyl-phosphate reductase | |
NH44784_048591 | 2 | 10 | 4.200454 | Transcriptional regulators, LysR family | |
NH44784_048601 | 2 | 12 | 3.846000 | Chloride channel protein | |
NH44784_048611 | -1 | 15 | 0.133431 | hypothetical protein | |
NH44784_048621 | -1 | 17 | -1.378652 | Probable transmembrane protein | |
NH44784_048631 | -1 | 12 | -0.368253 | histidine kinase | |
NH44784_048641 | 1 | 15 | -1.905954 | two component transcriptional regulator, LuxR | |
NH44784_048651 | 2 | 18 | -2.167437 | (Y14336) putative extracellular protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048371 | PF04183 | 545 | 0.0 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048411 | TCRTETA | 76 | 5e-17 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048431 | FERRIBNDNGPP | 42 | 2e-06 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048461 | PF05272 | 29 | 0.018 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048541 | TCRTETB | 29 | 0.032 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048551 | PF06057 | 30 | 0.014 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048601 | ACRIFLAVINRP | 31 | 0.022 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048631 | PF06580 | 30 | 0.025 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_048641 | HTHFIS | 95 | 7e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
64 | NH44784_049011 | NH44784_049071 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_049011 | 2 | 10 | 2.431754 | Dihydroxy-acid dehydratase | |
NH44784_049021 | 1 | 14 | 2.743102 | transcriptional regulator, GntR family | |
NH44784_049031 | 1 | 15 | 3.163070 | acetyltransferase (putative | |
NH44784_049041 | 0 | 14 | 3.757267 | hypothetical protein | |
NH44784_049051 | 1 | 13 | 3.525452 | hypothetical protein | |
NH44784_049061 | 1 | 12 | 3.664017 | Alkanesulfonates transport system permease | |
NH44784_049071 | 1 | 11 | 3.142690 | Nitrate ABC transporter, nitrate-binding |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049031 | SACTRNSFRASE | 41 | 3e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
65 | NH44784_049311 | NH44784_049391 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_049311 | 0 | 10 | 4.269947 | NnrS protein involved in response to NO | |
NH44784_049321 | 0 | 11 | 3.525567 | hypothetical protein | |
NH44784_049331 | 3 | 11 | 3.567695 | hypothetical protein | |
NH44784_049341 | 3 | 11 | 3.558944 | monooxygenase, FAD-binding | |
NH44784_049351 | 3 | 11 | 3.352134 | transcriptional regulator, LysR family | |
NH44784_049361 | 2 | 13 | 3.490926 | HlyD family secretion protein | |
NH44784_049371 | 2 | 12 | 2.981003 | Cobalt-zinc-cadmium resistance protein CzcA; | |
NH44784_049381 | 0 | 10 | 2.924467 | RND multidrug efflux transporter; Acriflavin | |
NH44784_049391 | -1 | 9 | 3.131125 | Transcriptional regulator, LysR family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049361 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049371 | ACRIFLAVINRP | 791 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049381 | ACRIFLAVINRP | 733 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
66 | NH44784_050051 | NH44784_050281 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_050051 | 0 | 19 | 3.451205 | Transcriptional regulator, MarR family | |
NH44784_050061 | 0 | 20 | 3.444918 | Inner membrane component of tripartite multidrug | |
NH44784_050071 | -1 | 20 | 3.613116 | hypothetical protein | |
NH44784_050081 | -1 | 20 | 3.652916 | Membrane fusion component of tripartite | |
NH44784_050091 | -1 | 17 | 3.892158 | Outer membrane component of tripartite multidrug | |
NH44784_050101 | 0 | 17 | 3.490898 | hypothetical protein | |
NH44784_050111 | 0 | 16 | 3.080043 | Acetolactate synthase large subunit | |
NH44784_050121 | 0 | 15 | 1.624482 | hypothetical protein | |
NH44784_050131 | 0 | 14 | 1.340146 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_050141 | -1 | 13 | 0.975772 | Transcriptional regulator, IclR family | |
NH44784_050151 | -1 | 11 | 1.357506 | FIG00638051: hypothetical protein | |
NH44784_050161 | 0 | 13 | 2.821944 | hypothetical protein | |
NH44784_050171 | 0 | 16 | 2.917449 | Lysine-specific permease | |
NH44784_050181 | -1 | 15 | 3.780899 | Methyl-accepting chemotaxis protein | |
NH44784_050191 | -1 | 18 | 4.115581 | hypothetical protein | |
NH44784_050201 | -2 | 18 | 3.635213 | RecA/RadA recombinase | |
NH44784_050211 | -2 | 15 | 3.174149 | DNA polymerase-like protein PA0670 | |
NH44784_050221 | -3 | 14 | 1.913409 | DNA polymerase III alpha subunit | |
NH44784_050231 | -2 | 14 | 1.010550 | hypothetical protein | |
NH44784_050241 | -2 | 13 | 0.776243 | hypothetical protein | |
NH44784_050251 | 0 | 12 | -0.056618 | Albicidin resistance protein | |
NH44784_050261 | 1 | 10 | -0.541900 | Transcriptional regulator | |
NH44784_050271 | 1 | 15 | -0.668889 | Aldo-keto reductase | |
NH44784_050281 | 3 | 16 | -1.673344 | conserved hypothetical protein; putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_050081 | RTXTOXIND | 53 | 8e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_050091 | RTXTOXIND | 33 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_050131 | DHBDHDRGNASE | 119 | 9e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
67 | NH44784_050371 | NH44784_050521 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_050371 | -1 | 22 | -3.010752 | Glutamate Aspartate transport system permease | |
NH44784_050381 | 2 | 26 | -4.657907 | probable solute-binding protein | |
NH44784_050391 | 1 | 31 | -4.914561 | Aspartate aminotransferase | |
NH44784_050401 | 2 | 36 | -6.299609 | Dimethylmenaquinone methyltransferase family | |
NH44784_050411 | 3 | 41 | -7.239384 | hypothetical protein | |
NH44784_050421 | 1 | 38 | -6.800392 | possible DNA helicase | |
NH44784_050431 | 0 | 36 | -6.349349 | hypothetical protein | |
NH44784_050441 | -2 | 35 | -5.771151 | Transcriptional regulator, GntR family domain / | |
NH44784_050451 | -1 | 33 | -6.596091 | FIG00482846: hypothetical protein | |
NH44784_050461 | 1 | 33 | -5.711738 | cytochrome B561 | |
NH44784_050471 | 1 | 24 | -3.766784 | Cobalt-zinc-cadmium resistance protein | |
NH44784_050481 | 3 | 26 | -4.354671 | Isochorismatase | |
NH44784_050491 | 4 | 26 | -4.481370 | hypothetical protein | |
NH44784_050501 | 3 | 25 | -3.150161 | hypothetical protein | |
NH44784_050511 | 3 | 20 | -1.873451 | hypothetical protein | |
NH44784_050521 | 3 | 16 | -1.878728 | Methyl-accepting chemotaxis protein I (serine |
68 | NH44784_050661 | NH44784_050711 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_050661 | 1 | 11 | 3.364058 | PhnB protein; putative DNA binding | |
NH44784_050671 | 2 | 12 | 4.194351 | MFS family multidrug efflux protein in | |
NH44784_050681 | 2 | 11 | 4.154425 | Probable transmembrane protein | |
NH44784_050691 | 1 | 11 | 4.618353 | transcriptional regulator, AraC family | |
NH44784_050701 | 1 | 12 | 3.758085 | TonB-dependent receptor | |
NH44784_050711 | 2 | 13 | 3.423475 | Methyltransferase type 12 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_050671 | TCRTETB | 116 | 2e-30 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
69 | NH44784_050801 | NH44784_051351 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_050801 | 0 | 17 | 4.230542 | hypothetical protein | |
NH44784_050811 | 2 | 14 | 3.881027 | putative lipoprotein | |
NH44784_050821 | 1 | 12 | 3.858224 | hypothetical protein | |
NH44784_050831 | 0 | 10 | 2.831643 | Purine nucleoside phosphorylase | |
NH44784_050841 | 0 | 8 | 2.554076 | FIG00453891: hypothetical protein | |
NH44784_050851 | 1 | 8 | 2.498991 | Transcriptional regulator, AraC family | |
NH44784_050861 | 1 | 12 | 1.429307 | Maebl | |
NH44784_050871 | -1 | 16 | 0.041308 | hypothetical protein | |
NH44784_050881 | 0 | 15 | 1.528732 | Flagellar motor rotation protein MotA | |
NH44784_050891 | 2 | 13 | 2.761442 | Flagellar motor rotation protein MotB | |
NH44784_050901 | 1 | 12 | 3.511166 | PhnB protein | |
NH44784_050911 | 1 | 14 | 3.545391 | PhnB protein | |
NH44784_050921 | 1 | 12 | 2.947587 | Glyoxalase/bleomycin resistance | |
NH44784_050931 | 2 | 11 | 3.587904 | RNA polymerase sigma-70 factor, ECF subfamily | |
NH44784_050941 | 3 | 12 | 3.281807 | hypothetical protein | |
NH44784_050951 | 3 | 12 | 3.504825 | L-rhamnose operon transcriptional activator | |
NH44784_050961 | 5 | 13 | 2.920932 | FIG006442: Integral membrane protein | |
NH44784_050971 | 3 | 14 | 2.648299 | hypothetical protein | |
NH44784_050981 | 4 | 17 | 3.813528 | HAD-superfamily hydrolase, subfamily IA, variant | |
NH44784_050991 | 3 | 16 | 3.799090 | major facilitator superfamily MFS_1 | |
NH44784_051001 | 3 | 16 | 4.046275 | probable transcriptional regulator | |
NH44784_051011 | 2 | 17 | 3.778438 | COGs COG2043 | |
NH44784_051021 | 3 | 15 | 3.144270 | FIG00553879: hypothetical protein | |
NH44784_051031 | 2 | 14 | 3.241621 | LysR family transcriptional regulator STM2281 | |
NH44784_051041 | -1 | 13 | 2.524193 | Glutathione S-transferase | |
NH44784_051051 | 0 | 13 | 3.548407 | hypothetical protein | |
NH44784_051061 | -2 | 9 | 3.945129 | Transcriptional regulator, MarR family | |
NH44784_051071 | -2 | 9 | 3.778193 | Hypothetical cytosolic protein | |
NH44784_051081 | 0 | 13 | 4.009874 | GCN5-related N-acetyltransferase | |
NH44784_051091 | 1 | 14 | 3.876019 | hypothetical protein | |
NH44784_051101 | 4 | 17 | 5.274332 | Citrate synthase (si | |
NH44784_051111 | 2 | 12 | 4.687880 | CoA transferase, CAIB/BAIF family | |
NH44784_051121 | 4 | 22 | 3.837135 | hypothetical protein | |
NH44784_051131 | 4 | 8 | 3.966134 | COG0666: FOG: Ankyrin repeat | |
NH44784_051141 | 5 | 11 | 4.148940 | hypothetical protein | |
NH44784_051151 | 4 | 10 | 4.640724 | hypothetical protein | |
NH44784_051161 | 1 | 12 | 3.550690 | FOG: WD40-like repeat | |
NH44784_051171 | 2 | 11 | 2.689361 | FIG00432598: hypothetical protein | |
NH44784_051181 | 0 | 10 | 1.309346 | hypothetical protein | |
NH44784_051191 | -2 | 16 | -1.169461 | Flagellar motor protein | |
NH44784_051201 | 0 | 20 | -1.727228 | hypothetical protein | |
NH44784_051211 | 1 | 25 | -3.741649 | Lignostilbene-alpha,beta-dioxygenase and related | |
NH44784_051221 | 2 | 36 | -6.685410 | hypothetical protein | |
NH44784_051231 | 3 | 35 | -5.320835 | hypothetical protein | |
NH44784_051241 | 1 | 22 | -2.409741 | hypothetical protein | |
NH44784_051251 | 0 | 15 | -1.280859 | hypothetical protein | |
NH44784_051261 | 0 | 12 | -0.828310 | hypothetical protein | |
NH44784_051271 | 0 | 11 | -0.359549 | COG1526: Uncharacterized protein required for | |
NH44784_051281 | -1 | 11 | 1.967619 | hypothetical protein | |
NH44784_051291 | 0 | 12 | 1.294407 | VgrG protein | |
NH44784_051301 | 2 | 12 | -0.178648 | ClpB protein | |
NH44784_051311 | 5 | 12 | -1.527084 | Uncharacterized protein ImpH/VasB | |
NH44784_051321 | 4 | 11 | -1.626827 | Protein ImpG/VasA | |
NH44784_051331 | 7 | 15 | -2.674463 | Uncharacterized protein ImpF | |
NH44784_051341 | 5 | 12 | -2.186401 | Uncharacterized protein ImpD | |
NH44784_051351 | 5 | 12 | -1.601053 | Uncharacterized protein ImpC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_050811 | cloacin | 27 | 0.038 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_050891 | OMPADOMAIN | 74 | 4e-17 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_050991 | TCRTETB | 38 | 6e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051021 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051181 | RTXTOXIND | 38 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051191 | OMPADOMAIN | 77 | 8e-19 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051301 | RTXTOXIND | 41 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
70 | NH44784_051611 | NH44784_051861 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_051611 | -1 | 10 | 3.520433 | MFS permease | |
NH44784_051621 | -1 | 9 | 2.586504 | Uncharacterized glutathione S-transferase-like | |
NH44784_051631 | 1 | 10 | 3.209992 | Superoxide dismutase [Cu-Zn] precursor | |
NH44784_051641 | 1 | 11 | 3.577782 | probable membrane protein STY4873 | |
NH44784_051651 | -1 | 11 | 3.004356 | Glycine cleavage system transcriptional | |
NH44784_051661 | -1 | 11 | 2.026832 | Enolase | |
NH44784_051671 | 0 | 15 | 1.447946 | hypothetical protein | |
NH44784_051681 | -2 | 10 | 2.273926 | hypothetical protein | |
NH44784_051691 | -2 | 9 | 2.590990 | hypothetical protein | |
NH44784_051701 | -2 | 12 | 2.126476 | hypothetical protein | |
NH44784_051711 | -2 | 15 | 2.872686 | Transcriptional regulator, LysR family | |
NH44784_051721 | -2 | 14 | 3.432431 | hypothetical protein | |
NH44784_051731 | -2 | 17 | 3.017644 | Enoyl-CoA hydratase / | |
NH44784_051741 | -2 | 15 | 3.058341 | 3-ketoacyl-CoA thiolase | |
NH44784_051751 | -1 | 13 | 2.662296 | Acyl-CoA dehydrogenase, long-chain | |
NH44784_051761 | -1 | 12 | 3.007788 | Acyl-CoA dehydrogenase family protein | |
NH44784_051771 | -1 | 11 | 2.499459 | Long-chain-fatty-acid--CoA ligase | |
NH44784_051781 | 0 | 11 | 2.468225 | hypothetical protein | |
NH44784_051791 | 1 | 10 | 2.617369 | pyridoxal phosphate-dependent | |
NH44784_051801 | 1 | 11 | 1.334540 | Transcriptional regulator, GntR family | |
NH44784_051811 | 1 | 11 | 3.180276 | Universal stress protein family | |
NH44784_051821 | 1 | 13 | 3.454558 | Transcriptional regulator, LysR family | |
NH44784_051831 | 0 | 10 | 3.081865 | Permeases of the major facilitator superfamily | |
NH44784_051841 | -1 | 10 | 2.708344 | Transcriptional regulator, MarR family | |
NH44784_051851 | 0 | 9 | 3.463249 | Niacin transporter NiaP | |
NH44784_051861 | 0 | 8 | 3.774394 | Putative diheme cytochrome c-553 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051611 | TCRTETA | 51 | 3e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051831 | TCRTETB | 194 | 2e-58 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051851 | TCRTETB | 55 | 2e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051861 | RTXTOXINA | 35 | 0.001 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family |
71 | NH44784_052071 | NH44784_052211 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_052071 | 0 | 11 | 3.399344 | putative amidase | |
NH44784_052081 | -1 | 13 | 3.214981 | hypothetical protein | |
NH44784_052091 | -1 | 14 | 2.934683 | putative esterase | |
NH44784_052101 | 0 | 15 | 2.363104 | Transcriptional regulator, LysR family | |
NH44784_052111 | 0 | 13 | 2.464071 | Permeases of the major facilitator superfamily | |
NH44784_052121 | -1 | 16 | 1.704535 | hypothetical protein | |
NH44784_052131 | -1 | 17 | 1.440219 | DinG family ATP-dependent helicase CPE1197 | |
NH44784_052141 | 2 | 17 | 0.783251 | Hypothetical protein, restriction | |
NH44784_052151 | 3 | 19 | -0.415922 | hypothetical protein | |
NH44784_052161 | 2 | 20 | -0.817359 | Putative acetyltransferase | |
NH44784_052171 | -2 | 14 | -0.646947 | FIG00433914: hypothetical protein | |
NH44784_052181 | -1 | 10 | -1.426023 | hypothetical protein | |
NH44784_052191 | 1 | 10 | -1.389048 | Enoyl-[acyl-carrier-protein] reductase [NADPH] | |
NH44784_052201 | 2 | 9 | -1.141447 | Quaternary ammonium compound-resistance protein | |
NH44784_052211 | 2 | 10 | -0.760757 | putative TetR-family transcriptional regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052111 | TCRTETB | 100 | 5e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052161 | SACTRNSFRASE | 48 | 1e-09 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052191 | DHBDHDRGNASE | 128 | 3e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052211 | HTHTETR | 52 | 7e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
72 | NH44784_052601 | NH44784_052761 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_052601 | 2 | 25 | 0.297228 | hypothetical protein | |
NH44784_052611 | 2 | 24 | -0.215902 | hypothetical protein | |
NH44784_052621 | 1 | 21 | -0.629563 | hypothetical protein | |
NH44784_052631 | 3 | 21 | -0.180424 | hypothetical protein | |
NH44784_052641 | -1 | 14 | -0.337691 | hypothetical protein | |
NH44784_052651 | -1 | 14 | -0.293093 | Transcriptional regulator, ArsR family | |
NH44784_052661 | 0 | 13 | -2.212909 | Transcriptional regulator, ArsR family | |
NH44784_052671 | 1 | 13 | -2.673189 | Bifunctional protein: zinc-containing alcohol | |
NH44784_052681 | 2 | 14 | -3.662262 | 5,10-methylenetetrahydrofolate reductase | |
NH44784_052691 | 3 | 13 | -4.916893 | Transcriptional activator MetR | |
NH44784_052701 | 4 | 19 | -5.871698 | FMN reductase | |
NH44784_052711 | 3 | 20 | -6.037742 | hypothetical protein | |
NH44784_052721 | 4 | 24 | -5.664594 | 5-methyltetrahydropteroyltriglutamate-- | |
NH44784_052731 | 5 | 29 | -5.859273 | Transcriptional regulator, LysR family | |
NH44784_052741 | 3 | 18 | -5.368837 | putative transposase | |
NH44784_052751 | 3 | 17 | -4.533244 | Transcriptional regulator, AraC family | |
NH44784_052761 | 2 | 14 | -3.463804 | TonB-dependent siderophore receptor |
73 | NH44784_053631 | NH44784_053801 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_053631 | 3 | 17 | 1.364012 | Transcriptional regulator, LysR family | |
NH44784_053641 | 3 | 18 | 1.230324 | putative hybrid sensor and regulator protein( | |
NH44784_053651 | 4 | 20 | 1.060546 | two-component hybrid sensor and regulator | |
NH44784_053661 | 4 | 20 | 1.003476 | hypothetical protein | |
NH44784_053671 | 4 | 21 | 1.086388 | Hemolysin activation/secretion protein | |
NH44784_053681 | 4 | 21 | 1.039539 | PUTATIVE HEMAGGLUTININ-RELATED PROTEIN | |
NH44784_053691 | -2 | 10 | 0.261740 | Peptide transport system permease protein sapC | |
NH44784_053701 | -1 | 12 | 0.836581 | putative acyl coenzyme A thioester hydrolase( | |
NH44784_053711 | -1 | 12 | 0.737986 | hypothetical protein | |
NH44784_053721 | -2 | 13 | 0.816470 | FIG00433859: hypothetical protein | |
NH44784_053731 | -1 | 12 | 2.021115 | Protein crcB homolog | |
NH44784_053741 | 0 | 12 | 2.316115 | Acetylornithine | |
NH44784_053751 | -1 | 11 | 2.521578 | transcriptional regulator, LysR family | |
NH44784_053761 | -1 | 10 | 3.187398 | hypothetical protein | |
NH44784_053771 | -1 | 11 | 2.326413 | hypothetical protein | |
NH44784_053781 | 0 | 9 | 2.749452 | putative two component sensor kinase | |
NH44784_053791 | 0 | 11 | 3.182098 | Response regulators consisting of a CheY-like | |
NH44784_053801 | 2 | 14 | 2.792304 | putative outer membrane (scaffolding) protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053641 | HTHFIS | 68 | 5e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053651 | HTHFIS | 73 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053671 | PYOCINKILLER | 31 | 0.017 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053681 | PF05860 | 71 | 4e-16 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053711 | FERRIBNDNGPP | 33 | 0.001 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053791 | HTHFIS | 87 | 4e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
74 | NH44784_054351 | NH44784_054451 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_054351 | 2 | 14 | 0.495481 | Transcriptional regulator, MarR family | |
NH44784_054361 | 3 | 15 | 0.605870 | Hydroxyethylthiazole kinase | |
NH44784_054371 | 3 | 14 | 0.127595 | Ferrichrome-iron receptor | |
NH44784_054381 | 2 | 15 | -0.302571 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | |
NH44784_054391 | 2 | 14 | -0.149361 | Iron(III) dicitrate transport ATP-binding | |
NH44784_054401 | 0 | 13 | 0.840587 | Petrobactin ABC transporter, permease protein | |
NH44784_054411 | -1 | 10 | 1.258638 | Ferric anguibactin transport system permease | |
NH44784_054421 | -2 | 11 | 1.096006 | Iron compound ABC transporter, periplasmic iron | |
NH44784_054431 | -2 | 11 | 0.892817 | TonB-dependent receptor; Outer membrane receptor | |
NH44784_054441 | 0 | 11 | 2.717006 | Copper-sensing two-component system response | |
NH44784_054451 | -1 | 13 | 3.074123 | Copper sensory histidine kinase CpxA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_054421 | FERRIBNDNGPP | 58 | 6e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_054441 | HTHFIS | 84 | 7e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_054451 | PF06580 | 31 | 0.009 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
75 | NH44784_054751 | NH44784_055011 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_054751 | 2 | 15 | -3.980656 | Chaperone protein HscB | |
NH44784_054761 | 1 | 12 | -3.750144 | Iron binding protein IscA for iron-sulfur | |
NH44784_054771 | 0 | 12 | -3.534394 | Iron-sulfur cluster assembly scaffold protein | |
NH44784_054781 | 0 | 12 | -2.708075 | Cysteine desulfurase | |
NH44784_054791 | -1 | 12 | -1.968519 | Iron-sulfur cluster regulator IscR | |
NH44784_054801 | 2 | 13 | -2.809508 | Low molecular weight protein tyrosine | |
NH44784_054811 | 3 | 14 | -3.113787 | Excinuclease ABC subunit B | |
NH44784_054821 | 4 | 18 | -3.477305 | hypothetical protein | |
NH44784_054831 | 6 | 20 | -3.382143 | Aromatic-amino-acid aminotransferase | |
NH44784_054841 | 5 | 19 | -3.728747 | SOS-response repressor and protease LexA | |
NH44784_054851 | 4 | 18 | -4.233491 | ATP-dependent protease La | |
NH44784_054861 | 4 | 19 | -4.149677 | ATP-dependent Clp protease ATP-binding subunit | |
NH44784_054871 | 2 | 19 | -3.134790 | ATP-dependent Clp protease proteolytic subunit | |
NH44784_054881 | 4 | 20 | -3.460583 | Cell division trigger factor | |
NH44784_054891 | 0 | 16 | -4.659280 | Putative metalloprotease yggG | |
NH44784_054901 | 1 | 17 | -3.701793 | hypothetical protein | |
NH44784_054911 | 4 | 18 | -3.039740 | cold shock-like protein | |
NH44784_054921 | 1 | 17 | -1.962871 | FIG027190: Putative transmembrane protein | |
NH44784_054931 | 1 | 22 | -2.489288 | Cold shock protein CspA | |
NH44784_054941 | -2 | 17 | -0.202782 | FIG00431460: hypothetical protein | |
NH44784_054951 | 1 | 16 | 1.285841 | hypothetical protein | |
NH44784_054961 | 2 | 18 | 0.410135 | hypothetical protein | |
NH44784_054971 | 3 | 17 | 1.837537 | hypothetical protein | |
NH44784_054981 | 3 | 17 | 2.004111 | Endoribonuclease L-PSP | |
NH44784_054991 | 3 | 16 | 2.177580 | METAL-ACTIVATED PYRIDOXAL ENZYME | |
NH44784_055001 | 3 | 16 | 2.651449 | Transcriptional regulator, LysR family | |
NH44784_055011 | 2 | 14 | 2.435213 | putative translational inhibitor |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_054851 | GPOSANCHOR | 34 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_054861 | HTHFIS | 29 | 0.048 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_054991 | ALARACEMASE | 42 | 4e-06 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. |
76 | NH44784_055181 | NH44784_055721 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_055181 | 1 | 28 | -3.064441 | hypothetical protein | |
NH44784_055191 | 1 | 26 | -3.453050 | hypothetical protein | |
NH44784_055201 | 1 | 27 | -2.969233 | hypothetical protein | |
NH44784_055211 | 2 | 32 | -5.317407 | phage-related hypothetical protein | |
NH44784_055221 | 2 | 30 | -4.433828 | hypothetical protein | |
NH44784_055231 | 2 | 29 | -4.079679 | phage-related putative exported protein | |
NH44784_055241 | 3 | 31 | -3.696766 | phage-related hypothetical protein | |
NH44784_055251 | 4 | 32 | -4.246305 | phage-related putative membrane protein | |
NH44784_055261 | 1 | 32 | -4.242458 | Phage tail fiber protein | |
NH44784_055271 | 3 | 31 | -3.313115 | Phage tail assembly protein | |
NH44784_055281 | 4 | 30 | -3.739767 | Phage minor tail protein | |
NH44784_055291 | 3 | 31 | -3.517723 | EBNA-1 | |
NH44784_055301 | 3 | 28 | -4.240395 | Phage minor tail protein #tail protein M | |
NH44784_055311 | 2 | 23 | -3.957890 | Phage tail length tape-measure protein 1 | |
NH44784_055321 | 3 | 16 | -3.582524 | hypothetical protein | |
NH44784_055331 | 2 | 19 | -2.910300 | hypothetical protein | |
NH44784_055341 | 3 | 23 | -3.079510 | hypothetical protein | |
NH44784_055351 | 2 | 22 | -3.557249 | hypothetical protein | |
NH44784_055361 | 3 | 25 | -3.504077 | hypothetical protein | |
NH44784_055371 | 4 | 30 | -3.553683 | hypothetical protein | |
NH44784_055381 | 3 | 31 | -3.970701 | Prophage Clp protease-like protein | |
NH44784_055391 | 3 | 31 | -4.495260 | Phage portal | |
NH44784_055401 | 4 | 29 | -4.678758 | hypothetical protein | |
NH44784_055411 | 5 | 30 | -4.133849 | COG5525: Bacteriophage tail assembly protein | |
NH44784_055421 | 5 | 26 | -2.993156 | hypothetical protein | |
NH44784_055431 | 5 | 27 | -2.916019 | hypothetical protein | |
NH44784_055441 | 4 | 26 | -1.924212 | hypothetical protein | |
NH44784_055451 | 3 | 26 | -1.671121 | hypothetical protein | |
NH44784_055461 | 4 | 28 | -2.176575 | phage-related hypothetical protein | |
NH44784_055471 | 1 | 29 | -3.233252 | hypothetical protein | |
NH44784_055481 | 1 | 36 | -6.934498 | hypothetical protein | |
NH44784_055491 | 0 | 38 | -7.932047 | hypothetical protein | |
NH44784_055501 | -1 | 35 | -7.734267 | hypothetical protein | |
NH44784_055511 | 1 | 39 | -7.638145 | hypothetical protein | |
NH44784_055521 | 1 | 40 | -6.410447 | hypothetical protein | |
NH44784_055531 | 1 | 39 | -4.744927 | hypothetical protein | |
NH44784_055541 | 1 | 36 | -3.285527 | hypothetical protein | |
NH44784_055551 | 1 | 34 | -2.605415 | hypothetical protein | |
NH44784_055561 | 0 | 35 | -2.741147 | hypothetical protein | |
NH44784_055571 | 0 | 31 | -2.976411 | hypothetical protein | |
NH44784_055581 | 0 | 28 | -3.168651 | hypothetical protein | |
NH44784_055591 | 2 | 24 | -3.368444 | hypothetical protein | |
NH44784_055601 | 3 | 24 | -2.934581 | hypothetical protein | |
NH44784_055611 | 4 | 24 | -3.194608 | hypothetical protein | |
NH44784_055621 | 3 | 22 | -2.684918 | Single-stranded DNA-binding protein | |
NH44784_055631 | 2 | 23 | -2.503511 | phage-related hypothetical protein | |
NH44784_055641 | 1 | 18 | -1.753009 | DNA recombination-dependent growth factor C | |
NH44784_055651 | 0 | 16 | -1.601770 | hypothetical protein | |
NH44784_055661 | 0 | 11 | -0.920973 | hypothetical protein | |
NH44784_055671 | 0 | 10 | -0.533309 | hypothetical protein | |
NH44784_055681 | 0 | 12 | 0.357469 | hypothetical protein | |
NH44784_055701 | 2 | 15 | 0.724022 | *N-succinyl-L,L-diaminopimelate aminotransferase | |
NH44784_055711 | 2 | 15 | 1.656277 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | |
NH44784_055721 | 2 | 13 | 1.259542 | N-succinyl-L,L-diaminopimelate desuccinylase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_055231 | BACINVASINB | 25 | 0.029 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_055291 | cloacin | 33 | 0.003 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_055311 | RTXTOXIND | 48 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_055411 | PF03544 | 30 | 0.019 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_055531 | ABC2TRNSPORT | 26 | 0.009 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein |
77 | NH44784_055821 | NH44784_055951 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_055821 | 2 | 13 | 0.021927 | chorismate mutase | |
NH44784_055831 | 1 | 13 | 0.278933 | ATP-dependent DNA helicase UvrD/PcrA | |
NH44784_055841 | 2 | 15 | 0.505816 | Fatty acid desaturase | |
NH44784_055851 | 2 | 13 | 0.870895 | hypothetical protein | |
NH44784_055861 | 2 | 13 | 0.854463 | Ribosomal RNA small subunit methyltransferase B | |
NH44784_055871 | -1 | 14 | -0.000691 | hypothetical protein | |
NH44784_055881 | -1 | 15 | -0.019973 | Phosphoribosylglycinamide formyltransferase | |
NH44784_055891 | -2 | 15 | 0.145102 | Riboflavin kinase / FMN adenylyltransferase | |
NH44784_055901 | -1 | 15 | 0.451516 | Isoleucyl-tRNA synthetase | |
NH44784_055911 | 2 | 13 | 1.606105 | Lipoprotein signal peptidase | |
NH44784_055921 | 2 | 11 | 2.096704 | Phosphopantothenoylcysteine decarboxylase | |
NH44784_055931 | 2 | 8 | 1.442829 | probable extra-cytoplasmic solute receptor | |
NH44784_055941 | 4 | 10 | 1.569996 | AroM protein | |
NH44784_055951 | 2 | 10 | 1.647570 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_055821 | TYPE3IMSPROT | 31 | 5e-04 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein |
78 | NH44784_056331 | NH44784_056461 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_056331 | 4 | 16 | -0.351600 | ATP-dependent Clp protease adaptor protein ClpS | |
NH44784_056341 | 3 | 10 | 0.253046 | Cold shock protein CspD | |
NH44784_056351 | 3 | 9 | 0.764900 | exported protein | |
NH44784_056361 | 2 | 9 | 0.430125 | Acetyl-CoA acetyltransferase | |
NH44784_056371 | 2 | 9 | 2.097467 | hypothetical protein | |
NH44784_056381 | 2 | 9 | 2.396162 | Chloride channel protein | |
NH44784_056391 | 2 | 8 | 2.364389 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_056401 | 4 | 13 | 2.078115 | hypothetical protein | |
NH44784_056411 | 3 | 10 | 2.311841 | Superoxide dismutase [Fe] | |
NH44784_056421 | 3 | 11 | 2.996254 | Ankyrin | |
NH44784_056431 | 0 | 10 | 2.312053 | hypothetical protein | |
NH44784_056441 | -1 | 11 | 2.749095 | Exodeoxyribonuclease VII large subunit | |
NH44784_056451 | -1 | 13 | 2.355134 | hypothetical protein | |
NH44784_056461 | 0 | 11 | 3.281646 | MotA/TolQ/ExbB proton channel family protein |
79 | NH44784_057031 | NH44784_057251 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_057031 | -2 | 12 | 3.308825 | Probable glutathione S-transferase-related | |
NH44784_057041 | -1 | 11 | 3.422462 | Ferredoxin | |
NH44784_057051 | 0 | 11 | 2.660880 | ADP-ribose pyrophosphatase | |
NH44784_057061 | 0 | 10 | 2.157806 | Transcriptional regulator, LysR family | |
NH44784_057071 | 1 | 10 | 2.227461 | Putative heat shock protein YegD | |
NH44784_057081 | 1 | 10 | 2.729246 | Inner-membrane permease FptX, ferripyochelin | |
NH44784_057091 | 1 | 10 | 2.283465 | hypothetical protein | |
NH44784_057101 | 1 | 11 | 2.255842 | Outer membrane receptor for ferric-pyochelin | |
NH44784_057111 | -1 | 9 | 2.592146 | Outer membrane receptor for ferric-pyochelin | |
NH44784_057121 | 0 | 10 | 4.226572 | iron aquisition regulator | |
NH44784_057131 | 1 | 9 | 4.073589 | Transcriptional regulator, AraC family | |
NH44784_057141 | 2 | 13 | 3.488327 | major facilitator superfamily MFS_1 | |
NH44784_057151 | 1 | 11 | 2.313293 | hypothetical protein | |
NH44784_057161 | 3 | 11 | 2.509887 | FIG00431968: hypothetical protein | |
NH44784_057171 | 1 | 10 | 2.441706 | Isochorismatase | |
NH44784_057181 | -1 | 10 | 1.854817 | GCN5-related N-acetyltransferase | |
NH44784_057191 | -1 | 13 | 2.213097 | Uncharacterized glutathione S-transferase-like | |
NH44784_057201 | -1 | 13 | 2.574907 | OsmC/Ohr family protein | |
NH44784_057211 | 0 | 13 | 2.854305 | Gfa-like protein | |
NH44784_057221 | 0 | 12 | 2.743113 | Transcriptional regulator, IclR family | |
NH44784_057231 | 2 | 12 | 3.100039 | hypothetical protein | |
NH44784_057241 | 2 | 13 | 3.357152 | putative 2-pyrone-4,6-dicarboxylic acid | |
NH44784_057251 | 0 | 13 | 3.034943 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_057071 | SHAPEPROTEIN | 46 | 2e-07 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_057141 | TCRTETB | 30 | 0.014 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_057171 | ISCHRISMTASE | 40 | 2e-06 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. |
80 | NH44784_057851 | NH44784_058041 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_057851 | 1 | 10 | 3.020480 | D-amino acid dehydrogenase small subunit | |
NH44784_057861 | -1 | 9 | 3.015167 | putative inner membrane protein | |
NH44784_057871 | 0 | 11 | 3.418657 | Phenazine biosynthesis protein PhzF like | |
NH44784_057881 | -2 | 10 | 3.196618 | Transcriptional regulator, GntR family domain / | |
NH44784_057891 | -1 | 10 | 3.329020 | hypothetical protein | |
NH44784_057901 | -1 | 9 | 1.698409 | hypothetical protein | |
NH44784_057911 | -2 | 10 | 1.649483 | Predicted dye-decolorizing peroxidase | |
NH44784_057921 | -1 | 12 | 1.786098 | FIG00460227: hypothetical protein | |
NH44784_057931 | -2 | 12 | 0.852077 | Transcriptional regulator, LysR family | |
NH44784_057941 | 0 | 10 | 1.332597 | permease | |
NH44784_057951 | -1 | 8 | -0.252511 | transcriptional regulator, AraC family | |
NH44784_057961 | 0 | 11 | -0.377578 | hypothetical protein | |
NH44784_057971 | 2 | 11 | 0.097971 | PhnB protein; putative DNA binding | |
NH44784_057981 | 2 | 13 | -0.217042 | hypothetical protein | |
NH44784_057991 | 4 | 16 | -0.691298 | Poly(3-hydroxybutyrate) depolymerase | |
NH44784_058001 | 2 | 22 | -3.475646 | hypothetical protein | |
NH44784_058011 | 2 | 15 | -0.745751 | hypothetical protein | |
NH44784_058021 | 3 | 15 | 1.016095 | COG1272: Predicted membrane protein hemolysin | |
NH44784_058031 | 3 | 14 | 1.669215 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_058041 | 2 | 12 | 1.606741 | Cold shock protein CspA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_057941 | TCRTETB | 96 | 1e-23 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_057981 | LIPOLPP20 | 29 | 0.008 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. |
81 | NH44784_058311 | NH44784_058741 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_058311 | 1 | 12 | 3.321528 | Cyanate ABC transporter, ATP-binding protein | |
NH44784_058321 | 1 | 13 | 3.475937 | Cyanate hydratase | |
NH44784_058331 | 4 | 14 | 4.405400 | Pyridoxal kinase | |
NH44784_058341 | 4 | 16 | 2.370914 | hypothetical protein | |
NH44784_058351 | 2 | 13 | 2.253241 | hypothetical protein | |
NH44784_058361 | 2 | 13 | 1.809271 | Survival protein SurA precursor (Peptidyl-prolyl | |
NH44784_058371 | 0 | 16 | 0.896121 | FIG00958542: hypothetical protein | |
NH44784_058381 | -1 | 16 | 1.792115 | hypothetical protein | |
NH44784_058391 | -1 | 15 | 0.860944 | Putative outer membrane TonB-dependent receptor | |
NH44784_058401 | 0 | 10 | 0.930472 | Ferric siderophore transport system, periplasmic | |
NH44784_058411 | -1 | 11 | 3.235898 | Biopolymer transport protein ExbD/TolR | |
NH44784_058421 | 0 | 12 | 3.606724 | MotA/TolQ/ExbB proton channel family protein | |
NH44784_058431 | 0 | 12 | 3.556286 | MotA/TolQ/ExbB proton channel family protein | |
NH44784_058441 | 0 | 13 | 3.708187 | Hemolysin activation/secretion protein | |
NH44784_058451 | 1 | 12 | 3.996649 | hypothetical protein | |
NH44784_058461 | 1 | 13 | 4.385017 | Filamentous haemagglutinin family outer membrane | |
NH44784_058471 | 0 | 17 | 4.520375 | Sigma factor regulator VreR (cytoplasmic | |
NH44784_058481 | 0 | 18 | 4.135049 | RNA polymerase sigma-70 factor, ECF subfamily | |
NH44784_058491 | 1 | 19 | 4.380767 | hypothetical protein | |
NH44784_058501 | 1 | 18 | 4.250571 | Filamentous haemagglutinin family outer membrane | |
NH44784_058511 | 0 | 19 | 4.419989 | Filamentous haemagglutinin family outer membrane | |
NH44784_058521 | 0 | 21 | 2.779452 | Sigma factor regulator VreR (cytoplasmic | |
NH44784_058531 | 0 | 17 | 1.844304 | RNA polymerase sigma-70 factor, ECF subfamily | |
NH44784_058541 | 2 | 18 | 2.521345 | hypothetical protein | |
NH44784_058551 | -1 | 20 | 1.964267 | hypothetical protein | |
NH44784_058561 | -1 | 19 | 0.566120 | hypothetical protein | |
NH44784_058571 | -1 | 19 | 0.383420 | Transcriptional regulator, MerR family | |
NH44784_058581 | -1 | 23 | -0.100935 | Ribulose-5-phosphate 4-epimerase and related | |
NH44784_058591 | -1 | 25 | -1.978815 | glutathione S-transferase-like | |
NH44784_058601 | 0 | 29 | -3.001191 | uncharacterized protein UPF0065 | |
NH44784_058611 | -1 | 34 | -4.697716 | hypothetical protein | |
NH44784_058621 | 0 | 31 | -4.426834 | transcriptional regulator, LysR-family | |
NH44784_058631 | 0 | 31 | -4.466891 | 2-Methylcitrate dehydratase( EC:4.2.1.79 | |
NH44784_058641 | 0 | 30 | -4.272870 | hypothetical protein | |
NH44784_058651 | 0 | 30 | -4.112160 | Immune-responsive protein 1 | |
NH44784_058661 | 0 | 27 | -3.954896 | Transcriptional regulator, LysR family | |
NH44784_058671 | 0 | 28 | -3.976543 | hypothetical protein | |
NH44784_058681 | -1 | 28 | -4.311771 | hypothetical protein | |
NH44784_058691 | 0 | 29 | -5.178062 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_058701 | 0 | 30 | -4.609880 | hypothetical protein | |
NH44784_058711 | -1 | 31 | -4.660774 | amidohydrolase 2 | |
NH44784_058721 | 0 | 34 | -5.145095 | Gluconolactonase | |
NH44784_058731 | 0 | 35 | -4.991271 | hypothetical protein | |
NH44784_058741 | 0 | 36 | -4.347743 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058361 | cdtoxina | 28 | 0.049 | Cytolethal distending toxin A signature. | |
>cdtoxina#Cytolethal distending toxin A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058381 | RTXTOXIND | 36 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058401 | TONBPROTEIN | 42 | 6e-07 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058421 | RTXTOXINA | 30 | 0.008 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058441 | PF00577 | 36 | 4e-04 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058461 | PF05860 | 58 | 8e-12 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058511 | PF05860 | 60 | 1e-12 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058691 | DHBDHDRGNASE | 112 | 9e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
82 | NH44784_058931 | NH44784_059071 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_058931 | 2 | 20 | 1.818143 | MFS transporter | |
NH44784_058941 | 2 | 20 | 1.187457 | hypothetical protein | |
NH44784_058951 | 3 | 21 | 1.807656 | putative secreted protein | |
NH44784_058961 | 4 | 19 | 0.957791 | Response regulator of zinc sigma-54-dependent | |
NH44784_058971 | 2 | 22 | 0.850900 | Sensor protein of zinc sigma-54-dependent | |
NH44784_058981 | -2 | 15 | 0.059362 | Lactoylglutathione lyase and related lyases | |
NH44784_058991 | -3 | 14 | 0.197663 | Ferredoxin | |
NH44784_059001 | -3 | 12 | 1.591218 | Transcriptional regulator, LysR family | |
NH44784_059011 | -3 | 10 | 1.733397 | Glutathione S-transferase | |
NH44784_059021 | -2 | 9 | 1.973535 | hypothetical protein | |
NH44784_059031 | -1 | 9 | 2.179997 | putative autotransporter | |
NH44784_059041 | 4 | 11 | 3.607740 | Transcriptional repressor, BlaI/MecI family | |
NH44784_059051 | 3 | 12 | 3.621750 | Murein-DD-endopeptidase | |
NH44784_059061 | 3 | 13 | 2.502843 | hypothetical protein | |
NH44784_059071 | 2 | 11 | 2.800534 | Beta-lactamase class D |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058961 | HTHFIS | 475 | e-168 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059031 | PERTACTIN | 79 | 5e-17 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059051 | BLACTAMASEA | 42 | 4e-06 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059071 | BLACTAMASEA | 28 | 0.022 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. |
83 | NH44784_059311 | NH44784_059511 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_059311 | 2 | 14 | 3.773310 | *Xanthine and CO dehydrogenases maturation | |
NH44784_059321 | 2 | 13 | 3.984798 | CTP:molybdopterin cytidylyltransferase | |
NH44784_059331 | 2 | 12 | 3.858934 | Isoquinoline 1-oxidoreductase beta subunit | |
NH44784_059341 | 1 | 14 | 4.354954 | Isoquinoline 1-oxidoreductase alpha subunit | |
NH44784_059351 | 1 | 15 | 4.043254 | Transcriptional regulator, AraC family | |
NH44784_059361 | 2 | 14 | 5.338004 | Transcriptional regulator, GntR family domain / | |
NH44784_059371 | 1 | 12 | 4.580921 | putative dioxygenase | |
NH44784_059381 | 3 | 12 | 4.804864 | L-lysine permease | |
NH44784_059391 | 4 | 14 | 3.031570 | Phenazine biosynthesis protein PhzF like | |
NH44784_059401 | 3 | 19 | 2.128845 | hypothetical protein | |
NH44784_059411 | 2 | 18 | 3.416841 | hypothetical protein | |
NH44784_059421 | 3 | 19 | 2.859691 | hypothetical protein | |
NH44784_059431 | 6 | 18 | 2.411319 | hypothetical protein | |
NH44784_059441 | 0 | 15 | 1.088262 | hypothetical protein | |
NH44784_059451 | 0 | 15 | 2.105330 | hypothetical protein | |
NH44784_059461 | 2 | 16 | 3.520882 | hypothetical protein | |
NH44784_059471 | 3 | 17 | 3.441909 | hypothetical protein | |
NH44784_059481 | 1 | 15 | 2.073893 | hypothetical protein | |
NH44784_059491 | 1 | 15 | 2.573395 | dTDP-glucose 4,6-dehydratase | |
NH44784_059501 | 1 | 16 | 3.311631 | Glycosyl transferase, group 1 | |
NH44784_059511 | 1 | 16 | 3.146319 | ADP-heptose--lipooligosaccharide |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059411 | IGASERPTASE | 28 | 0.011 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059471 | CHANLCOLICIN | 29 | 0.006 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059491 | NUCEPIMERASE | 173 | 1e-53 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
84 | NH44784_059601 | NH44784_059801 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_059601 | 2 | 15 | 5.106235 | hypothetical protein | |
NH44784_059611 | 2 | 13 | 5.434039 | hypothetical protein | |
NH44784_059621 | 2 | 14 | 5.792051 | Glycosyl transferase, family 2 | |
NH44784_059631 | 1 | 13 | 5.393178 | No significant database matches | |
NH44784_059641 | 0 | 12 | 4.145270 | Potassium efflux system KefA protein / | |
NH44784_059651 | 1 | 12 | 3.518382 | hypothetical protein | |
NH44784_059661 | 0 | 13 | 2.610163 | Transaldolase / Glucose-6-phosphate isomerase | |
NH44784_059671 | 3 | 12 | -1.052138 | hypothetical protein | |
NH44784_059681 | 1 | 10 | -0.927395 | Protein yciF | |
NH44784_059691 | 1 | 10 | 0.047165 | hypothetical protein | |
NH44784_059701 | 2 | 13 | 1.206970 | Multimeric flavodoxin WrbA | |
NH44784_059711 | 1 | 13 | 2.065413 | hypothetical protein | |
NH44784_059721 | 0 | 10 | 3.172858 | Calcium/proton antiporter | |
NH44784_059731 | -1 | 9 | 3.222812 | Endonuclease/Exonuclease/phosphatase family | |
NH44784_059741 | -1 | 9 | 3.368002 | Cardiolipin synthetase | |
NH44784_059751 | -2 | 9 | 3.206517 | hypothetical protein | |
NH44784_059761 | -2 | 9 | 3.104036 | Glycogen synthase, ADP-glucose transglucosylase | |
NH44784_059771 | -1 | 10 | 3.574656 | Alpha-amylase | |
NH44784_059781 | 0 | 10 | 3.611513 | Trehalose synthase | |
NH44784_059791 | 1 | 9 | 3.472365 | 1,4-alpha-glucan (glycogen) branching | |
NH44784_059801 | 0 | 8 | 3.226052 | Glycogen debranching enzyme |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059741 | STREPKINASE | 30 | 0.019 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. |
85 | NH44784_059951 | NH44784_060001 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_059951 | 2 | 12 | 3.655115 | putative phosphotransferase | |
NH44784_059961 | 2 | 13 | 3.824042 | putative aminotransferase | |
NH44784_059971 | 2 | 12 | 3.848582 | Transcriptional regulator, GntR family domain / | |
NH44784_059981 | -1 | 12 | 3.348631 | Permeases of the major facilitator superfamily | |
NH44784_059991 | -1 | 11 | 3.904859 | hypothetical protein | |
NH44784_060001 | -1 | 11 | 3.541416 | Two-component response regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059981 | TCRTETA | 30 | 0.018 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
86 | NH44784_060391 | NH44784_060441 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_060391 | -1 | 15 | 3.720916 | Outer membrane protein A precursor | |
NH44784_060401 | 1 | 14 | 4.932847 | hypothetical protein | |
NH44784_060411 | 1 | 13 | 4.836149 | Transcriptional regulator, LysR family | |
NH44784_060421 | 1 | 13 | 5.098348 | Outer membrane component of tripartite multidrug | |
NH44784_060431 | 0 | 11 | 3.784302 | Membrane fusion component of tripartite | |
NH44784_060441 | -1 | 10 | 3.450076 | Inner membrane component of tripartite multidrug |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_060391 | OMPADOMAIN | 85 | 7e-21 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_060431 | RTXTOXIND | 90 | 7e-22 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_060441 | TCRTETB | 119 | 3e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
87 | NH44784_061191 | NH44784_061321 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_061191 | 0 | 15 | 3.197320 | ABC transporter, ATP-binding/permease protein | |
NH44784_061201 | -1 | 11 | 4.100138 | hypothetical protein | |
NH44784_061211 | -1 | 11 | 4.086599 | 2-keto-3-deoxygluconate permease (KDG permease | |
NH44784_061221 | 0 | 9 | 4.881753 | FIG00432481: hypothetical protein | |
NH44784_061231 | -1 | 11 | 3.573977 | 4-hydroxythreonine-4-phosphate dehydrogenase | |
NH44784_061241 | 0 | 15 | 3.175678 | probable GntR-family transcriptional regulator | |
NH44784_061251 | -1 | 17 | 2.631061 | 3-oxoadipate CoA-transferase subunit B | |
NH44784_061261 | 0 | 14 | 3.332976 | 3-oxoadipate CoA-transferase subunit A | |
NH44784_061271 | 2 | 15 | 4.114698 | Enoyl-CoA hydratase | |
NH44784_061281 | 3 | 13 | 2.417491 | CAIB/BAIF family protein | |
NH44784_061291 | 3 | 16 | 2.125651 | Transcriptional regulator, IclR family | |
NH44784_061301 | 2 | 17 | 2.520240 | Cysteine dioxygenase | |
NH44784_061311 | 3 | 15 | 1.989162 | NAD-dependent protein deacetylase of SIR2 | |
NH44784_061321 | 3 | 15 | 0.880454 | hypothetical protein |
88 | NH44784_062921 | NH44784_063211 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_062921 | 2 | 13 | 2.976160 | Gamma-glutamyltranspeptidase | |
NH44784_062931 | 2 | 13 | 2.416969 | protease Do | |
NH44784_062941 | 3 | 13 | 2.263937 | Arsenic efflux pump protein | |
NH44784_062951 | 0 | 11 | 1.638252 | Thiol-disulfide isomerase and thioredoxins | |
NH44784_062961 | 4 | 13 | 2.874302 | Cytochrome c-type biogenesis protein CcdA (DsbD | |
NH44784_062971 | 4 | 13 | 1.366298 | hypothetical protein | |
NH44784_062981 | 4 | 14 | 0.921395 | Transcriptional regulatory protein ompR | |
NH44784_062991 | 5 | 14 | 1.356242 | sensor histidine kinase | |
NH44784_063001 | 4 | 15 | 1.073977 | Organic hydroperoxide resistance protein | |
NH44784_063011 | 2 | 15 | 1.380178 | transcriptional regulator, LysR family | |
NH44784_063021 | 0 | 16 | 1.657141 | Dipeptide transport system permease protein DppB | |
NH44784_063031 | 0 | 15 | 2.029671 | Dipeptide transport system permease protein DppC | |
NH44784_063041 | -2 | 14 | 2.073056 | Oligopeptide transport ATP-binding protein OppD | |
NH44784_063051 | -2 | 12 | 2.635094 | Oligopeptide transport ATP-binding protein OppF | |
NH44784_063061 | -2 | 12 | 2.680050 | Oligopeptide ABC transporter, periplasmic | |
NH44784_063071 | 0 | 10 | 2.573354 | FIG00482872: hypothetical protein | |
NH44784_063081 | 1 | 12 | 2.356771 | Outer membrane protein (porin | |
NH44784_063091 | 3 | 17 | 2.532921 | hypothetical protein | |
NH44784_063101 | 3 | 19 | 2.458981 | Transcriptional regulator, GntR family domain / | |
NH44784_063111 | 2 | 24 | 0.970732 | FIG00840301: hypothetical protein | |
NH44784_063121 | 0 | 26 | -0.675755 | alpha/beta superfamily hydrolase | |
NH44784_063131 | 2 | 29 | -1.860177 | hypothetical protein | |
NH44784_063141 | 0 | 24 | -1.585132 | hypothetical protein | |
NH44784_063151 | 1 | 24 | -0.998673 | hypothetical protein | |
NH44784_063161 | 2 | 29 | -2.943595 | hypothetical protein | |
NH44784_063171 | 4 | 30 | -3.695141 | FIG00901576: hypothetical protein | |
NH44784_063181 | 5 | 34 | -3.867857 | hypothetical protein | |
NH44784_063191 | 3 | 30 | -4.031536 | hypothetical protein | |
NH44784_063201 | 3 | 26 | -3.110316 | hypothetical protein | |
NH44784_063211 | 1 | 23 | -3.552149 | diguanylate cyclase/phosphodiesterase (GGDEF & |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062931 | V8PROTEASE | 75 | 6e-17 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062981 | HTHFIS | 89 | 1e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_063081 | ECOLNEIPORIN | 71 | 7e-16 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_063111 | FLGMRINGFLIF | 28 | 0.030 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_063181 | IGASERPTASE | 26 | 0.034 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
89 | NH44784_063411 | NH44784_063501 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_063411 | 0 | 11 | -3.064249 | Type cbb3 cytochrome oxidase biogenesis protein | |
NH44784_063421 | 0 | 11 | -2.119071 | Cytochrome c oxidase subunit CcoP | |
NH44784_063431 | 1 | 10 | -0.737232 | Cytochrome c oxidase subunit CcoQ | |
NH44784_063441 | 0 | 9 | 0.676700 | Cytochrome c oxidase subunit CcoO | |
NH44784_063451 | 1 | 9 | 1.761020 | Cytochrome c oxidase subunit CcoN | |
NH44784_063461 | 3 | 10 | 4.397869 | Type cbb3 cytochrome oxidase biogenesis protein | |
NH44784_063471 | 3 | 11 | 4.683883 | Type cbb3 cytochrome oxidase biogenesis protein | |
NH44784_063481 | 2 | 13 | 4.875707 | Adenosylmethionine-8-amino-7-oxononanoate | |
NH44784_063491 | 2 | 12 | 5.534822 | 8-amino-7-oxononanoate synthase | |
NH44784_063501 | -1 | 13 | 3.692880 | Biotin synthesis protein bioH |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_063441 | PYOCINKILLER | 31 | 0.005 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_063491 | PERTACTIN | 30 | 0.014 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. |
90 | NH44784_002931 | NH44784_003101 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_002931 | 3 | 16 | -2.302882 | FIG00973797: hypothetical protein | |
NH44784_002941 | 5 | 16 | -2.734435 | GTP-binding protein TypA/BipA | |
NH44784_002951 | 4 | 16 | -1.426023 | tRNA pseudouridine synthase B | |
NH44784_002961 | 5 | 17 | -1.426023 | Ribosome-binding factor A | |
NH44784_002971 | 4 | 16 | -1.470305 | Translation initiation factor 2 | |
NH44784_002981 | 4 | 21 | -2.427884 | Transcription termination protein NusA | |
NH44784_002991 | 4 | 26 | -1.631422 | COG0779: clustered with transcription | |
NH44784_003001 | 3 | 24 | -1.065117 | Ribosomal large subunit pseudouridine synthase | |
NH44784_003011 | 2 | 23 | -1.640287 | Segregation and condensation protein B | |
NH44784_003031 | 0 | 17 | -1.278204 | *LysR-family transcriptional regulator clustered | |
NH44784_003041 | 1 | 16 | -0.990700 | Putative metal chaperone, involved in Zn | |
NH44784_003051 | 0 | 10 | -0.552116 | Putative metal chaperone, involved in Zn | |
NH44784_003081 | 0 | 10 | -0.511553 | **Two-component system response regulator QseB | |
NH44784_003091 | -1 | 10 | -0.045353 | Sensory histidine kinase QseC | |
NH44784_003101 | 0 | 11 | -0.603486 | Peptidase S1C, Do |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002931 | MICOLLPTASE | 31 | 0.001 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002941 | TCRTETOQM | 168 | 5e-47 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_002971 | TCRTETOQM | 77 | 2e-16 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_003001 | cloacin | 32 | 0.009 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_003081 | HTHFIS | 87 | 3e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_003091 | 56KDTSANTIGN | 32 | 0.004 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_003101 | V8PROTEASE | 85 | 3e-20 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. |
91 | NH44784_005791 | NH44784_005881 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_005791 | 2 | 14 | 0.262025 | Peptidyl-prolyl cis-trans isomerase | |
NH44784_005801 | 1 | 10 | 1.273390 | DNA ligase | |
NH44784_005811 | 2 | 10 | 1.850224 | hypothetical protein | |
NH44784_005821 | 1 | 10 | 0.952159 | Chromosome partition protein smc | |
NH44784_005831 | -1 | 8 | 0.181694 | hypothetical protein | |
NH44784_005841 | -2 | 7 | -0.379686 | Probable transmembrane protein | |
NH44784_005851 | 0 | 8 | -0.072869 | Uracil-DNA glycosylase, family 4 | |
NH44784_005861 | -1 | 8 | -1.394651 | Inactive homolog of metal-dependent | |
NH44784_005871 | 0 | 10 | -2.401293 | Two-component system response regulator OmpR | |
NH44784_005881 | -2 | 9 | -1.092514 | Osmolarity sensory histidine kinase EnvZ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_005791 | SOPEPROTEIN | 28 | 0.038 | Salmonella type III secretion SopE effector protein ... | |
>SOPEPROTEIN#Salmonella type III secretion SopE effector protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_005821 | GPOSANCHOR | 52 | 1e-08 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_005851 | PF05616 | 31 | 0.008 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_005861 | SACTRNSFRASE | 47 | 2e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_005871 | HTHFIS | 102 | 4e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_005881 | PF06580 | 42 | 4e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
92 | NH44784_006101 | NH44784_006141 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_006101 | 4 | 20 | -4.027649 | NADH-ubiquinone oxidoreductase chain C | |
NH44784_006111 | 3 | 18 | -3.141289 | NADH-ubiquinone oxidoreductase chain B | |
NH44784_006121 | 2 | 18 | -1.557984 | NADH ubiquinone oxidoreductase chain A | |
NH44784_006131 | -1 | 15 | -0.089877 | outer membrane porin | |
NH44784_006141 | -1 | 11 | 2.383500 | Transcriptional regulator, TetR family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006101 | PF04183 | 28 | 0.045 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006121 | HOKGEFTOXIC | 25 | 0.037 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006131 | ECOLNEIPORIN | 101 | 2e-26 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006141 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
93 | NH44784_006231 | NH44784_006351 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_006231 | -1 | 14 | 1.870286 | Transcription repressor of multidrug efflux pump | |
NH44784_006241 | -1 | 15 | 1.208950 | RND efflux system, membrane fusion protein CmeA | |
NH44784_006251 | -1 | 15 | 1.238423 | RND efflux system, inner membrane transporter | |
NH44784_006261 | -2 | 12 | 0.720834 | RND efflux system, outer membrane lipoprotein | |
NH44784_006271 | -2 | 10 | -0.186447 | Transcriptional regulator, DeoR family | |
NH44784_006281 | -1 | 9 | 0.391198 | RND efflux system, outer membrane lipoprotein | |
NH44784_006291 | 0 | 13 | -0.248293 | RND multidrug efflux transporter; Acriflavin | |
NH44784_006301 | -1 | 10 | 0.780242 | Probable Co/Zn/Cd efflux system membrane fusion | |
NH44784_006311 | -1 | 12 | 0.414850 | High-affinity choline uptake protein BetT | |
NH44784_006321 | -1 | 15 | 0.909156 | Transcriptional regulator, TetR family | |
NH44784_006331 | -1 | 13 | 0.526062 | Probable Co/Zn/Cd efflux system membrane fusion | |
NH44784_006341 | -2 | 12 | -0.162448 | Acriflavin resistance protein | |
NH44784_006351 | -2 | 11 | 0.311380 | RND efflux system, outer membrane |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006231 | HTHTETR | 102 | 5e-29 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006241 | RTXTOXIND | 44 | 7e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006251 | ACRIFLAVINRP | 1111 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006291 | ACRIFLAVINRP | 800 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006301 | RTXTOXIND | 54 | 5e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006321 | HTHTETR | 78 | 4e-20 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006331 | RTXTOXIND | 45 | 4e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006341 | ACRIFLAVINRP | 472 | e-152 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006351 | RTXTOXIND | 32 | 0.006 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
94 | NH44784_006511 | NH44784_006631 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_006511 | -1 | 14 | -0.927998 | Functional role page for Anaerobic nitric oxide | |
NH44784_006521 | -1 | 20 | -1.250585 | hypothetical protein | |
NH44784_006531 | 0 | 17 | -0.578260 | Osmosensitive K+ channel histidine kinase KdpD | |
NH44784_006541 | -1 | 14 | 0.242584 | Two-component hybrid sensor and regulator | |
NH44784_006551 | 0 | 9 | 0.752759 | UTP--glucose-1-phosphate uridylyltransferase | |
NH44784_006561 | -2 | 9 | 0.267844 | Chemotaxis protein methyltransferase CheR | |
NH44784_006571 | -2 | 9 | 0.088586 | Bis(5'-nucleosyl)-tetraphosphatase, symmetrical | |
NH44784_006581 | -2 | 7 | 0.146935 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_006591 | -2 | 6 | 0.212084 | Acetoacetyl-CoA reductase | |
NH44784_006601 | -2 | 7 | -0.020085 | Uncharacterized transporter, similarity to | |
NH44784_006611 | -1 | 7 | 0.180516 | autotransporter | |
NH44784_006621 | 0 | 8 | 1.316593 | two-component system regulatory protein | |
NH44784_006631 | 1 | 6 | 1.703614 | Two-component system sensor protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006511 | HTHFIS | 360 | e-122 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006541 | HTHFIS | 76 | 9e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006561 | HTHFIS | 74 | 8e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006581 | DHBDHDRGNASE | 123 | 3e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006591 | DHBDHDRGNASE | 89 | 1e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006611 | SUBTILISIN | 109 | 4e-28 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006621 | HTHFIS | 90 | 8e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_006631 | PF06580 | 43 | 2e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
95 | NH44784_008211 | NH44784_008291 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_008211 | 4 | 10 | -3.517527 | Chaperone protein DnaK | |
NH44784_008221 | -1 | 11 | -2.303824 | putative thioredoxin | |
NH44784_008231 | -1 | 10 | -0.638340 | Heat shock protein GrpE | |
NH44784_008241 | -1 | 11 | -1.352602 | hypothetical protein | |
NH44784_008251 | -1 | 12 | -1.269529 | Ferrochelatase, protoheme ferro-lyase | |
NH44784_008261 | 0 | 15 | -0.706201 | Heat-inducible transcription repressor HrcA | |
NH44784_008271 | -2 | 12 | 0.615951 | NAD kinase | |
NH44784_008281 | 0 | 13 | -1.663103 | DNA repair protein RecN | |
NH44784_008291 | 2 | 21 | -4.761150 | Ferric uptake regulation protein FUR |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008211 | SHAPEPROTEIN | 141 | 3e-39 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008231 | RTXTOXIND | 30 | 0.006 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008271 | PF06057 | 34 | 3e-04 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008281 | CHANLCOLICIN | 35 | 6e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_008291 | ACRIFLAVINRP | 28 | 0.012 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
96 | NH44784_011401 | NH44784_011501 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_011401 | -1 | 9 | 2.045882 | NAD-dependent epimerase/dehydratase | |
NH44784_011411 | -2 | 12 | 1.811002 | Threonine dehydratase, catabolic | |
NH44784_011421 | -2 | 11 | 1.706411 | Holliday junction DNA helicase RuvB | |
NH44784_011431 | -1 | 11 | 1.549480 | putative two-component sensor | |
NH44784_011441 | -2 | 10 | 0.327054 | Two-component system response regulator OmpR | |
NH44784_011451 | -2 | 9 | 0.540369 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_011461 | -2 | 10 | -0.351570 | ATP-dependent DNA helicase RecQ | |
NH44784_011471 | -1 | 8 | -1.173618 | Cytochrome d ubiquinol oxidase subunit II | |
NH44784_011481 | 0 | 8 | -1.643888 | Cytochrome d ubiquinol oxidase subunit I | |
NH44784_011491 | 2 | 10 | -2.192307 | Glutaminyl-tRNA synthetase | |
NH44784_011501 | 3 | 15 | -2.475204 | Septum site-determining protein MinC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_011401 | NUCEPIMERASE | 51 | 2e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_011431 | PERTACTIN | 33 | 0.003 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_011441 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_011451 | PF00577 | 59 | 2e-11 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_011501 | IGASERPTASE | 33 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
97 | NH44784_012021 | NH44784_012071 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_012021 | -2 | 12 | 0.698811 | Macrolide-specific efflux protein MacA | |
NH44784_012031 | -1 | 13 | 0.375231 | putative inner membrane efflux protein | |
NH44784_012041 | -1 | 14 | -0.003518 | Cation transport protein chaC | |
NH44784_012051 | -2 | 11 | 0.283894 | Pyridoxamine 5'-phosphate oxidase | |
NH44784_012061 | -2 | 11 | -0.486786 | Nitrilotriacetate monooxygenase component B | |
NH44784_012071 | -3 | 12 | -0.615165 | Aminobutyraldehyde dehydrogenase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_012021 | RTXTOXIND | 58 | 3e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_012031 | TCRTETA | 51 | 4e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_012061 | RTXTOXINA | 28 | 0.015 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_012071 | PF04183 | 33 | 0.002 | IucA / IucC family | |
>PF04183#IucA / IucC family |
98 | NH44784_014491 | NH44784_014551 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_014491 | 0 | 13 | -1.739012 | Type III secretion outermembrane pore forming | |
NH44784_014501 | 2 | 12 | -0.702907 | hypothetical protein | |
NH44784_014511 | 1 | 12 | -0.324652 | Type III secretion inner membrane protein | |
NH44784_014521 | 2 | 13 | 1.225199 | Type III secretion inner membrane protein | |
NH44784_014531 | 2 | 12 | 1.563107 | Type III secretion inner membrane protein | |
NH44784_014541 | 3 | 12 | 1.761477 | Type III secretion inner membrane protein | |
NH44784_014551 | 3 | 11 | 2.918170 | Type III secretion inner membrane protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014491 | TYPE3OMGPROT | 430 | e-146 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014511 | TYPE3IMSPROT | 346 | e-120 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014521 | TYPE3IMRPROT | 143 | 5e-44 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014531 | TYPE3IMQPROT | 71 | 3e-20 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014541 | TYPE3IMPPROT | 230 | 9e-79 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_014551 | TYPE3OMOPROT | 74 | 8e-17 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein |
99 | NH44784_015241 | NH44784_015311 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_015241 | -1 | 12 | 3.040896 | Nicotinamidase/isochorismatase family protein | |
NH44784_015251 | -2 | 10 | 3.479170 | Acetyl-CoA synthetase (ADP-forming) alpha and | |
NH44784_015261 | -1 | 13 | 2.699982 | Glutamyl-tRNA synthetase | |
NH44784_015271 | -1 | 11 | 2.361855 | putative membrane transport protein | |
NH44784_015281 | -3 | 14 | 1.851754 | putative lipoprotein | |
NH44784_015291 | -2 | 16 | 0.174143 | Transcriptional regulator, LysR family | |
NH44784_015301 | 0 | 18 | -1.073343 | hypothetical protein | |
NH44784_015311 | 2 | 18 | -1.950715 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015241 | ISCHRISMTASE | 68 | 1e-15 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015271 | TCRTETB | 69 | 9e-15 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015301 | PF06057 | 28 | 0.029 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_015311 | PHAGEIV | 31 | 0.004 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. |
100 | NH44784_016161 | NH44784_016261 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_016161 | 0 | 11 | 2.340578 | transcriptional regulator, TetR family | |
NH44784_016171 | 2 | 15 | 1.964974 | D-aminoacylase | |
NH44784_016181 | 2 | 15 | 1.592315 | D-amino acid dehydrogenase small subunit | |
NH44784_016191 | 1 | 15 | 0.873775 | hypothetical protein | |
NH44784_016201 | 1 | 15 | 0.824048 | RND efflux system, outer membrane | |
NH44784_016211 | 3 | 16 | 0.731142 | AcrB/AcrD/AcrF family protein | |
NH44784_016221 | 0 | 13 | 1.343873 | AcrB/AcrD/AcrF family protein | |
NH44784_016231 | -2 | 10 | 2.147684 | Probable Co/Zn/Cd efflux system membrane fusion | |
NH44784_016241 | -2 | 10 | 1.846534 | FIG002842: hypothetical protein | |
NH44784_016251 | -2 | 11 | 1.939143 | Dephospho-CoA kinase | |
NH44784_016261 | -1 | 11 | 1.421041 | Leader peptidase (Prepilin peptidase) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016161 | HTHTETR | 53 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016171 | UREASE | 45 | 4e-07 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016181 | adhesinmafb | 30 | 0.026 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016211 | ACRIFLAVINRP | 820 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016221 | ACRIFLAVINRP | 827 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016231 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_016261 | PREPILNPTASE | 240 | 8e-81 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family |
101 | NH44784_023801 | NH44784_023931 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_023801 | 0 | 46 | -6.932306 | Undecaprenyl-phosphate N-acetylglucosaminyl | |
NH44784_023811 | -1 | 39 | -5.784702 | UDP-N-acetylglucosamine 4,6-dehydratase | |
NH44784_023821 | -1 | 32 | -2.738934 | Lipopolysaccharide heptosyltransferase I | |
NH44784_023831 | -1 | 20 | -0.358408 | 3-deoxy-D-manno-octulosonic-acid transferase | |
NH44784_023841 | 0 | 15 | -0.217372 | UDP-glucose 4-epimerase | |
NH44784_023851 | 0 | 11 | 1.612005 | hypothetical protein | |
NH44784_023861 | 0 | 10 | 2.198008 | Pantothenate kinase type III, CoaX-like | |
NH44784_023871 | 0 | 11 | 1.989195 | Biotin-protein ligase | |
NH44784_023881 | -1 | 12 | 1.387229 | ABC-type transport system involved in resistance | |
NH44784_023891 | 1 | 11 | 0.768764 | Methionine ABC transporter ATP-binding protein | |
NH44784_023901 | -1 | 10 | 0.712425 | Mammalian cell entry related domain protein | |
NH44784_023911 | -2 | 11 | 0.457216 | Probable lipoprotein | |
NH44784_023921 | -3 | 9 | -0.538651 | Alpha/beta hydrolase | |
NH44784_023931 | -1 | 21 | -4.227442 | D-alanyl-D-alanine carboxypeptidase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023801 | PREPILNPTASE | 30 | 0.015 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023811 | NUCEPIMERASE | 78 | 1e-17 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023841 | NUCEPIMERASE | 81 | 2e-19 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023861 | PF03309 | 96 | 2e-25 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023901 | PF07201 | 30 | 0.012 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023921 | PF06057 | 28 | 0.023 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_023931 | BLACTAMASEA | 39 | 2e-05 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. |
102 | NH44784_026171 | NH44784_026271 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_026171 | 2 | 12 | 2.539097 | Nucleoside-diphosphate-sugar epimerases | |
NH44784_026181 | 2 | 13 | 2.239997 | D-beta-hydroxybutyrate dehydrogenase | |
NH44784_026191 | -1 | 11 | 1.729316 | Predicted pyridoxine biosynthesis protein | |
NH44784_026201 | -1 | 10 | 1.268889 | regulatory protein GntR, HTH:GntR, C-terminal | |
NH44784_026211 | -1 | 12 | 0.916319 | transcriptional regulator, LysR family | |
NH44784_026221 | 0 | 12 | 0.818505 | major facilitator superfamily MFS_1 | |
NH44784_026231 | -1 | 12 | 0.624547 | hypothetical protein | |
NH44784_026241 | -2 | 12 | 0.158034 | Zinc-regulated outer membrane receptor | |
NH44784_026251 | 2 | 14 | -0.023724 | Hydroxypyruvate isomerase | |
NH44784_026261 | 1 | 18 | -3.461647 | hypothetical protein | |
NH44784_026271 | 0 | 15 | -3.006570 | Putative DMT superfamily metabolite efflux |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026171 | NUCEPIMERASE | 91 | 4e-23 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026201 | DHBDHDRGNASE | 31 | 0.002 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026221 | TCRTETB | 29 | 0.029 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026241 | PF00577 | 32 | 0.011 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026271 | PF06580 | 29 | 0.021 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
103 | NH44784_026621 | NH44784_026741 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_026621 | -2 | 10 | 0.126264 | glycosyltransferase( EC:2.4.- | |
NH44784_026631 | -3 | 10 | 1.733828 | transposase, IS4 family protein | |
NH44784_026641 | -3 | 12 | 1.565190 | hypothetical protein | |
NH44784_026651 | -2 | 16 | 1.746781 | Glutathione S-transferase family protein | |
NH44784_026661 | -1 | 13 | 1.419077 | FIG01197967: hypothetical protein | |
NH44784_026671 | -1 | 14 | 0.394018 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_026681 | -2 | 15 | -0.418749 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_026691 | -1 | 14 | -0.369881 | Branched-chain amino acid transport ATP-binding | |
NH44784_026701 | -1 | 8 | -0.996518 | Branched-chain amino acid transport ATP-binding | |
NH44784_026711 | -1 | 9 | -1.254300 | Branched-chain amino acid transport system | |
NH44784_026721 | -1 | 11 | -1.579129 | High-affinity branched-chain amino acid | |
NH44784_026731 | -2 | 15 | -1.549847 | ABC branched chain amino acid family | |
NH44784_026741 | -3 | 14 | -0.495069 | 3-oxoacyl-[acyl-carrier protein] reductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026621 | AUTOINDCRSYN | 29 | 0.020 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026671 | DHBDHDRGNASE | 113 | 2e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026681 | DHBDHDRGNASE | 121 | 2e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026691 | YERSSTKINASE | 29 | 0.029 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_026741 | DHBDHDRGNASE | 105 | 1e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
104 | NH44784_027341 | NH44784_027431 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_027341 | 0 | 9 | 0.892909 | Transcriptional regulator, PadR family | |
NH44784_027351 | 0 | 9 | 0.560443 | iron-chelator utilization protein | |
NH44784_027361 | -1 | 10 | 0.532797 | Transcriptional regulator, LysR family | |
NH44784_027371 | -2 | 9 | 0.550387 | Methylisocitrate lyase | |
NH44784_027381 | -2 | 10 | 0.696209 | hypothetical protein | |
NH44784_027391 | -1 | 10 | 0.463094 | hypothetical protein | |
NH44784_027401 | 1 | 12 | 0.937245 | putative RNA polymerase sigma factor | |
NH44784_027411 | 2 | 10 | 1.338536 | response regulator, NarL-family | |
NH44784_027421 | 1 | 10 | 0.963120 | two-component hybrid sensor and regulator | |
NH44784_027431 | 0 | 9 | 0.541190 | Oxalate/formate antiporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027341 | cloacin | 30 | 0.014 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027351 | OMPADOMAIN | 29 | 0.026 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027391 | PYOCINKILLER | 31 | 0.041 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027411 | HTHFIS | 70 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027421 | PF06580 | 41 | 5e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_027431 | TCRTETB | 36 | 3e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
105 | NH44784_028891 | NH44784_028961 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_028891 | 3 | 12 | 1.499786 | Acetoacetyl-CoA reductase | |
NH44784_028901 | 2 | 11 | 2.142881 | hypothetical protein | |
NH44784_028911 | 2 | 11 | 2.188294 | ABC-type multidrug transport system, permease | |
NH44784_028921 | 1 | 9 | 2.415860 | ABC-type multidrug transport system, permease | |
NH44784_028931 | -1 | 8 | 3.209041 | secretion protein HlyD | |
NH44784_028941 | 0 | 9 | 3.055224 | RND efflux system, outer membrane lipoprotein | |
NH44784_028951 | 0 | 10 | 1.919625 | Polyhydroxyalkanoic acid synthase | |
NH44784_028961 | -2 | 12 | 0.787091 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028891 | DHBDHDRGNASE | 122 | 5e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028911 | ABC2TRNSPORT | 58 | 1e-11 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028931 | RTXTOXIND | 70 | 2e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028941 | RTXTOXIND | 33 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_028961 | HTHTETR | 64 | 5e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
106 | NH44784_032011 | NH44784_032071 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_032011 | 1 | 9 | -0.117250 | hypothetical protein | |
NH44784_032021 | 0 | 12 | -2.049076 | Transcriptional regulator, AraC family | |
NH44784_032031 | 2 | 13 | -2.800788 | outer membrane porin | |
NH44784_032041 | 3 | 11 | -3.230438 | outer membrane porin | |
NH44784_032051 | 3 | 11 | -2.604056 | outer membrane porin | |
NH44784_032061 | 2 | 12 | -2.277366 | Cytochrome oxidase biogenesis protein | |
NH44784_032071 | 2 | 12 | -3.037398 | Cytochrome O ubiquinol oxidase subunit IV |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032011 | TCRTETB | 57 | 4e-11 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032031 | ECOLNEIPORIN | 96 | 1e-24 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032041 | ECOLNEIPORIN | 85 | 2e-20 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032051 | ECOLNEIPORIN | 94 | 1e-23 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_032071 | ACRIFLAVINRP | 27 | 0.038 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
107 | NH44784_041371 | NH44784_041451 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_041371 | 3 | 16 | 3.954554 | Transcription regulatory protein opdE | |
NH44784_041381 | 0 | 13 | 2.218817 | Major facilitator family transporter | |
NH44784_041391 | -1 | 10 | 2.636030 | transcriptional regulator, TetR family | |
NH44784_041401 | -2 | 9 | 3.566094 | hypothetical protein | |
NH44784_041411 | -2 | 7 | 3.044720 | Methyltransferase | |
NH44784_041421 | -1 | 6 | 2.524170 | LacI family transcriptional regulator | |
NH44784_041431 | -1 | 5 | 2.460156 | D-galactonate transporter | |
NH44784_041441 | -1 | 6 | 3.364288 | Aspartyl-tRNA(Asn) amidotransferase subunit A | |
NH44784_041451 | 0 | 8 | 1.952080 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041371 | TCRTETB | 38 | 6e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041381 | TCRTETB | 36 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041391 | HTHTETR | 77 | 6e-20 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041431 | TCRTETA | 44 | 5e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_041451 | IGASERPTASE | 38 | 7e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
108 | NH44784_042001 | NH44784_042031 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_042001 | -2 | 11 | 3.306057 | General secretion pathway protein J | |
NH44784_042011 | 0 | 12 | 2.830943 | General secretion pathway protein I | |
NH44784_042021 | 1 | 13 | 1.556154 | General secretion pathway protein H | |
NH44784_042031 | 1 | 13 | 1.361263 | General secretion pathway protein G |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042001 | PilS_PF08805 | 31 | 0.003 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042011 | BCTERIALGSPG | 44 | 7e-09 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042021 | BCTERIALGSPH | 31 | 8e-04 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042031 | BCTERIALGSPG | 171 | 3e-58 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G |
109 | NH44784_042161 | NH44784_042201 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_042161 | 2 | 10 | 2.721238 | Transcriptional regulator, TetR family | |
NH44784_042171 | 3 | 9 | 3.528633 | Putative oxidoreductase YncB | |
NH44784_042181 | 1 | 8 | 3.390110 | Transcriptional regulator, TetR family | |
NH44784_042191 | -1 | 8 | 2.188969 | Short-chain dehydrogenase/reductase SDR | |
NH44784_042201 | -1 | 12 | 0.979475 | Permeases of the major facilitator superfamily |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042161 | HTHTETR | 71 | 2e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042181 | HTHTETR | 55 | 2e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042191 | DHBDHDRGNASE | 50 | 1e-09 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042201 | TCRTETB | 118 | 4e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
110 | NH44784_042321 | NH44784_042441 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_042321 | -1 | 13 | -1.465668 | IcsA | |
NH44784_042331 | 0 | 22 | -0.794945 | Oligopeptidase A | |
NH44784_042341 | 1 | 21 | -1.639425 | Methylenetetrahydrofolate dehydrogenase (NADP+ | |
NH44784_042351 | 2 | 20 | -1.813370 | Nitrogen regulation protein NR(I | |
NH44784_042361 | 1 | 18 | -1.332038 | tw-component sensor kinase | |
NH44784_042371 | 3 | 20 | -1.376123 | Pyruvate dehydrogenase E1 component | |
NH44784_042381 | 2 | 15 | 0.587729 | Dihydrolipoamide acetyltransferase component of | |
NH44784_042391 | 3 | 17 | -0.384357 | Dihydrolipoamide dehydrogenase of pyruvate | |
NH44784_042401 | 3 | 15 | -0.745354 | Dehydrogenases with different specificities | |
NH44784_042411 | 3 | 17 | -1.697815 | LysR family transcriptional regulator PA2877 | |
NH44784_042421 | 2 | 18 | -2.312763 | hypothetical protein | |
NH44784_042431 | 1 | 19 | -2.683144 | hypothetical protein | |
NH44784_042441 | 1 | 21 | -4.402214 | Flagellar biosynthesis protein FliC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042321 | PRTACTNFAMLY | 54 | 5e-09 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042351 | HTHFIS | 117 | 5e-33 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042381 | IGASERPTASE | 38 | 1e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042391 | RTXTOXIND | 34 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042401 | DHBDHDRGNASE | 70 | 2e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042431 | IGASERPTASE | 33 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042441 | FLAGELLIN | 217 | 3e-66 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. |
111 | NH44784_042501 | NH44784_042631 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_042501 | 0 | 9 | -2.466733 | Flagellar motor rotation protein MotA | |
NH44784_042511 | 2 | 8 | -2.179754 | Flagellar motor rotation protein MotB | |
NH44784_042521 | 1 | 10 | -1.655803 | Chemotaxis regulator-transmits chemoreceptor | |
NH44784_042531 | 2 | 10 | -1.836233 | Signal transduction histidine kinase CheA | |
NH44784_042541 | 2 | 11 | -2.232316 | Positive regulator of CheA protein activity | |
NH44784_042551 | 1 | 14 | -0.884418 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_042561 | -1 | 13 | -0.758274 | Chemotaxis protein methyltransferase CheR | |
NH44784_042571 | 1 | 10 | -0.151298 | Chemotaxis response regulator protein-glutamate | |
NH44784_042581 | 1 | 11 | 1.415812 | Chemotaxis regulator-transmits chemoreceptor | |
NH44784_042591 | 1 | 10 | 1.739194 | Chemotaxis response-phosphatase CheZ | |
NH44784_042601 | 1 | 10 | 1.941102 | methyl-accepting chemotaxis sensory transducer | |
NH44784_042611 | 1 | 8 | 2.111555 | Flagellar biosynthesis protein FlhB | |
NH44784_042621 | 2 | 8 | 2.221663 | Flagellar biosynthesis protein FlhA | |
NH44784_042631 | 1 | 10 | 2.817483 | Flagellar biosynthesis protein FlhF |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042501 | ACRIFLAVINRP | 37 | 1e-04 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042511 | OMPADOMAIN | 44 | 4e-07 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042521 | HTHFIS | 81 | 3e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042531 | PF06580 | 43 | 2e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042571 | HTHFIS | 53 | 6e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042581 | HTHFIS | 85 | 2e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042601 | CHANLCOLICIN | 30 | 0.026 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042611 | TYPE3IMSPROT | 366 | e-128 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042631 | PF03544 | 40 | 3e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein |
112 | NH44784_042681 | NH44784_043031 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_042681 | 4 | 14 | -2.033990 | Flagellar basal-body rod protein FlgC | |
NH44784_042691 | 4 | 13 | -1.590858 | Flagellar basal-body rod modification protein | |
NH44784_042701 | 2 | 13 | -1.391229 | Flagellar hook protein FlgE | |
NH44784_042711 | 1 | 12 | -1.744601 | Flagellar basal-body rod protein FlgF | |
NH44784_042721 | 2 | 12 | -2.091452 | Flagellar basal-body rod protein FlgG | |
NH44784_042731 | 1 | 10 | -2.266215 | Flagellar L-ring protein FlgH | |
NH44784_042741 | 0 | 9 | -2.059469 | Flagellar P-ring protein FlgI | |
NH44784_042751 | 0 | 10 | -1.530027 | Flagellar protein FlgJ [peptidoglycan | |
NH44784_042761 | 1 | 11 | -1.439947 | Flagellar hook-associated protein FlgK | |
NH44784_042771 | 2 | 16 | -0.807102 | Flagellar hook-associated protein FlgL | |
NH44784_042781 | 3 | 16 | -0.593506 | hypothetical protein | |
NH44784_042791 | 2 | 13 | -0.433960 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_042801 | 1 | 13 | -0.166695 | Methyl-accepting chemotaxis protein I (serine | |
NH44784_042811 | -1 | 11 | -1.246167 | putative lipoprotein | |
NH44784_042821 | 0 | 12 | -1.162519 | hypothetical protein | |
NH44784_042831 | 1 | 12 | -1.006851 | Aerotaxis sensor receptor protein | |
NH44784_042841 | 2 | 12 | -0.382908 | methyl-accepting chemotaxis protein | |
NH44784_042851 | 1 | 15 | -1.372433 | Flagellar biosynthesis protein FliR | |
NH44784_042861 | 0 | 15 | -1.137423 | Flagellar biosynthesis protein FliQ | |
NH44784_042871 | -2 | 14 | -0.822705 | Flagellar biosynthesis protein FliP | |
NH44784_042881 | 0 | 15 | 1.827884 | Flagellar biosynthesis protein FliQ | |
NH44784_042891 | 0 | 15 | 1.080802 | Flagellar motor switch protein FliN | |
NH44784_042901 | -1 | 15 | 1.545475 | Flagellar motor switch protein FliM | |
NH44784_042911 | -1 | 17 | 3.250466 | Flagellar biosynthesis protein FliL | |
NH44784_042921 | -1 | 18 | 2.324943 | hypothetical protein | |
NH44784_042931 | -2 | 20 | 2.016575 | Flagellar hook-length control protein FliK | |
NH44784_042941 | -2 | 21 | 0.541015 | Flagellar protein FliJ | |
NH44784_042951 | -2 | 18 | 0.694885 | Flagellum-specific ATP synthase FliI | |
NH44784_042961 | 0 | 18 | -0.102616 | Flagellar assembly protein FliH | |
NH44784_042971 | -1 | 16 | -0.450000 | Flagellar motor switch protein FliG | |
NH44784_042981 | 0 | 16 | 1.705359 | Flagellar M-ring protein FliF | |
NH44784_042991 | -1 | 16 | 1.894539 | Flagellar hook-basal body complex protein FliE | |
NH44784_043001 | 0 | 17 | 1.795786 | hypothetical protein | |
NH44784_043011 | 1 | 22 | -0.354128 | Flagellar biosynthesis protein FlhB | |
NH44784_043021 | 2 | 22 | -0.824716 | ortholog of Bordetella pertussis (BX470248) | |
NH44784_043031 | 1 | 19 | -1.349920 | ortholog of Bordetella pertussis (BX470248) |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042681 | FLGHOOKAP1 | 30 | 0.004 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042701 | FLGHOOKAP1 | 43 | 2e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042721 | FLGHOOKAP1 | 42 | 1e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042731 | FLGLRINGFLGH | 197 | 3e-66 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042741 | FLGPRINGFLGI | 381 | e-134 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042751 | FLGFLGJ | 226 | 9e-75 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042761 | FLGHOOKAP1 | 327 | e-108 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042771 | FLAGELLIN | 44 | 9e-07 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042791 | PF03544 | 33 | 0.002 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042801 | PF05272 | 35 | 7e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042851 | TYPE3IMRPROT | 167 | 3e-53 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042861 | TYPE3IMQPROT | 60 | 8e-16 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042871 | FLGBIOSNFLIP | 287 | e-100 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042891 | FLGMOTORFLIN | 143 | 2e-46 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042901 | FLGMOTORFLIM | 272 | 4e-92 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042931 | FLGHOOKFLIK | 59 | 1e-11 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042941 | FLGFLIJ | 68 | 3e-17 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042961 | FLGFLIH | 89 | 1e-23 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042971 | FLGMOTORFLIG | 301 | e-103 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042981 | FLGMRINGFLIF | 459 | e-159 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_042991 | FLGHOOKFLIE | 60 | 2e-15 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_043011 | TYPE3IMSPROT | 69 | 2e-17 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_043031 | PF05616 | 30 | 0.005 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein |
113 | NH44784_046211 | NH44784_046411 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_046211 | 2 | 18 | 1.531770 | Permeases of the major facilitator superfamily | |
NH44784_046221 | 0 | 16 | 0.797281 | Lactoylglutathione lyase | |
NH44784_046231 | 0 | 13 | 0.626632 | hypothetical protein | |
NH44784_046241 | 0 | 12 | 0.333059 | FIG00433089: hypothetical protein | |
NH44784_046251 | -1 | 11 | -0.124563 | two-component sensor histidine kinase | |
NH44784_046261 | -1 | 12 | -0.445631 | hypothetical protein | |
NH44784_046271 | -1 | 11 | -0.522282 | RNA polymerase sigma-54 factor RpoN | |
NH44784_046281 | 0 | 11 | 0.644529 | Response regulator of zinc sigma-54-dependent | |
NH44784_046291 | 1 | 14 | 1.518421 | Putative transcriptional regulatory protein | |
NH44784_046301 | 1 | 14 | 2.263422 | hypothetical protein | |
NH44784_046311 | 0 | 14 | 3.088206 | hypothetical protein | |
NH44784_046321 | 0 | 12 | 3.022783 | hypothetical protein | |
NH44784_046331 | 1 | 15 | 2.551701 | hypothetical protein | |
NH44784_046341 | 0 | 17 | 1.601844 | hypothetical protein | |
NH44784_046351 | 0 | 15 | 1.275020 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_046361 | 0 | 15 | 0.912463 | hypothetical protein | |
NH44784_046371 | 2 | 15 | 1.904336 | hypothetical protein | |
NH44784_046381 | 2 | 16 | 1.773381 | DNA topoisomerase IB (poxvirus type | |
NH44784_046391 | 1 | 13 | 1.831730 | ThiJ/PfpI family protein | |
NH44784_046401 | 1 | 11 | 3.013488 | hypothetical protein | |
NH44784_046411 | 0 | 11 | 2.624733 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046211 | TCRTETB | 51 | 3e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046251 | HTHFIS | 75 | 6e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046261 | GPOSANCHOR | 33 | 2e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046281 | HTHFIS | 328 | e-112 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046291 | HTHFIS | 491 | e-174 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046301 | INFPOTNTIATR | 26 | 0.041 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046341 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046351 | DHBDHDRGNASE | 97 | 7e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046401 | PRTACTNFAMLY | 27 | 0.003 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046411 | PF06580 | 24 | 0.043 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
114 | NH44784_046881 | NH44784_046931 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_046881 | 1 | 17 | 4.575913 | General secretion pathway protein H | |
NH44784_046891 | 2 | 15 | 3.876204 | General secretion pathway protein I | |
NH44784_046901 | 3 | 16 | 3.231405 | General secretion pathway protein J | |
NH44784_046911 | 6 | 17 | 1.883329 | hypothetical protein | |
NH44784_046921 | 3 | 14 | 0.217169 | COGs COG3558 | |
NH44784_046931 | 4 | 15 | -0.011346 | Transcriptional regulator, TetR family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046881 | BCTERIALGSPH | 47 | 4e-09 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046891 | PilS_PF08805 | 31 | 0.001 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046901 | PF05946 | 32 | 0.001 | Toxin-coregulated pilus subunit TcpA | |
>PF05946#Toxin-coregulated pilus subunit TcpA | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_046931 | HTHTETR | 69 | 8e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
115 | NH44784_049361 | NH44784_049411 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_049361 | 2 | 13 | 3.490926 | HlyD family secretion protein | |
NH44784_049371 | 2 | 12 | 2.981003 | Cobalt-zinc-cadmium resistance protein CzcA; | |
NH44784_049381 | 0 | 10 | 2.924467 | RND multidrug efflux transporter; Acriflavin | |
NH44784_049391 | -1 | 9 | 3.131125 | Transcriptional regulator, LysR family | |
NH44784_049401 | -1 | 12 | 1.888894 | Acetylornithine | |
NH44784_049411 | -2 | 12 | 0.865643 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049361 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049371 | ACRIFLAVINRP | 791 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049381 | ACRIFLAVINRP | 733 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049411 | PRTACTNFAMLY | 29 | 0.038 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. |
116 | NH44784_049621 | NH44784_049691 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_049621 | -1 | 11 | 1.597160 | autotransporter | |
NH44784_049631 | -2 | 11 | 0.722279 | hypothetical protein | |
NH44784_049641 | -1 | 8 | 1.253441 | Non-specific DNA-binding protein Dps / | |
NH44784_049651 | -1 | 10 | 2.526749 | Xaa-Pro aminopeptidase | |
NH44784_049661 | 1 | 11 | 2.793386 | Transcriptional regulator YbiH, TetR family | |
NH44784_049671 | 1 | 13 | 2.680835 | Transcriptional regulator, TetR family | |
NH44784_049681 | 0 | 14 | 1.324559 | FIG01111792: hypothetical protein | |
NH44784_049691 | 1 | 13 | 1.510218 | Major facilitator superfamily MFS_1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049621 | PERTACTIN | 32 | 0.010 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049641 | HELNAPAPROT | 93 | 1e-26 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049661 | HTHTETR | 56 | 8e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049671 | HTHTETR | 49 | 2e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049691 | TCRTETB | 32 | 0.004 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
117 | NH44784_049801 | NH44784_049871 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_049801 | -1 | 20 | -3.157821 | Taurine transport ATP-binding protein TauB | |
NH44784_049811 | -2 | 19 | -2.915141 | Taurine transport system permease protein TauC | |
NH44784_049821 | -1 | 21 | -3.148021 | Type I secretion outer membrane protein, TolC | |
NH44784_049831 | -1 | 21 | -2.975001 | HlyD family secretion protein | |
NH44784_049841 | -1 | 21 | -3.094984 | cyclolysin secretion ATP-binding protein | |
NH44784_049851 | -1 | 20 | -2.581435 | Alkaline phosphatase | |
NH44784_049861 | -1 | 15 | -1.731571 | Transcriptional regulator, GntR family domain / | |
NH44784_049871 | 0 | 17 | -1.496432 | Per-activated serine protease autotransporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049801 | PF05272 | 31 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049831 | RTXTOXIND | 378 | e-129 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049851 | RTXTOXINA | 133 | 4e-33 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_049871 | IGASERPTASE | 460 | e-137 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
118 | NH44784_051961 | NH44784_052041 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_051961 | -1 | 8 | 1.805740 | outer membrane protein (porin | |
NH44784_051971 | 0 | 10 | 2.330030 | ABC transporter ATP-binding protein | |
NH44784_051981 | 0 | 12 | 2.328736 | Ferric iron ABC transporter, iron-binding | |
NH44784_051991 | 0 | 14 | 2.860050 | Ferric iron ABC transporter, permease protein | |
NH44784_052001 | -1 | 14 | 2.285831 | diguanylate cyclase (GGDEF domain) with PAS/PAC | |
NH44784_052011 | 0 | 13 | 1.901899 | Chemotaxis response regulator protein-glutamate | |
NH44784_052021 | 0 | 13 | 2.181700 | Sensor histidine kinase/response regulator | |
NH44784_052031 | -2 | 12 | 2.549958 | Chemotaxis signal transduction protein | |
NH44784_052041 | -1 | 13 | 2.870086 | Chemotaxis protein methyltransferase CheR |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051961 | ECOLNEIPORIN | 57 | 3e-11 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_051971 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052001 | HTHFIS | 66 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052011 | HTHFIS | 44 | 5e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052021 | HTHFIS | 75 | 4e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_052041 | PF03544 | 28 | 0.047 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein |
119 | NH44784_053581 | NH44784_053711 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_053581 | 0 | 15 | 2.830503 | 3-oxoacyl-[acyl-carrier protein] reductase | |
NH44784_053591 | 0 | 12 | 2.756171 | putative Hydrolase, alpha/beta fold family | |
NH44784_053601 | 0 | 11 | 2.762888 | Transcriptional regulator, TetR family | |
NH44784_053611 | 0 | 12 | 2.115195 | O-methyltransferase | |
NH44784_053621 | -1 | 10 | 2.027883 | Permeases of the major facilitator superfamily | |
NH44784_053631 | 3 | 17 | 1.364012 | Transcriptional regulator, LysR family | |
NH44784_053641 | 3 | 18 | 1.230324 | putative hybrid sensor and regulator protein( | |
NH44784_053651 | 4 | 20 | 1.060546 | two-component hybrid sensor and regulator | |
NH44784_053661 | 4 | 20 | 1.003476 | hypothetical protein | |
NH44784_053671 | 4 | 21 | 1.086388 | Hemolysin activation/secretion protein | |
NH44784_053681 | 4 | 21 | 1.039539 | PUTATIVE HEMAGGLUTININ-RELATED PROTEIN | |
NH44784_053691 | -2 | 10 | 0.261740 | Peptide transport system permease protein sapC | |
NH44784_053701 | -1 | 12 | 0.836581 | putative acyl coenzyme A thioester hydrolase( | |
NH44784_053711 | -1 | 12 | 0.737986 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053581 | DHBDHDRGNASE | 78 | 2e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053601 | HTHTETR | 59 | 8e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053621 | TCRTETB | 100 | 7e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053641 | HTHFIS | 68 | 5e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053651 | HTHFIS | 73 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053671 | PYOCINKILLER | 31 | 0.017 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053681 | PF05860 | 71 | 4e-16 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_053711 | FERRIBNDNGPP | 33 | 0.001 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. |
120 | NH44784_058361 | NH44784_058461 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_058361 | 2 | 13 | 1.809271 | Survival protein SurA precursor (Peptidyl-prolyl | |
NH44784_058371 | 0 | 16 | 0.896121 | FIG00958542: hypothetical protein | |
NH44784_058381 | -1 | 16 | 1.792115 | hypothetical protein | |
NH44784_058391 | -1 | 15 | 0.860944 | Putative outer membrane TonB-dependent receptor | |
NH44784_058401 | 0 | 10 | 0.930472 | Ferric siderophore transport system, periplasmic | |
NH44784_058411 | -1 | 11 | 3.235898 | Biopolymer transport protein ExbD/TolR | |
NH44784_058421 | 0 | 12 | 3.606724 | MotA/TolQ/ExbB proton channel family protein | |
NH44784_058431 | 0 | 12 | 3.556286 | MotA/TolQ/ExbB proton channel family protein | |
NH44784_058441 | 0 | 13 | 3.708187 | Hemolysin activation/secretion protein | |
NH44784_058451 | 1 | 12 | 3.996649 | hypothetical protein | |
NH44784_058461 | 1 | 13 | 4.385017 | Filamentous haemagglutinin family outer membrane |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058361 | cdtoxina | 28 | 0.049 | Cytolethal distending toxin A signature. | |
>cdtoxina#Cytolethal distending toxin A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058381 | RTXTOXIND | 36 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058401 | TONBPROTEIN | 42 | 6e-07 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058421 | RTXTOXINA | 30 | 0.008 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058441 | PF00577 | 36 | 4e-04 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_058461 | PF05860 | 58 | 8e-12 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. |
121 | NH44784_059161 | NH44784_059201 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_059161 | -2 | 9 | 0.487001 | efflux transporter, RND family, MFP subunit | |
NH44784_059171 | -2 | 9 | -0.405502 | RND multidrug efflux transporter; Acriflavin | |
NH44784_059181 | -2 | 8 | 0.227508 | RND efflux system, outer membrane lipoprotein | |
NH44784_059191 | -2 | 11 | -0.399488 | hypothetical protein | |
NH44784_059201 | -2 | 10 | -0.830051 | TRAP-type C4-dicarboxylate transport |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059161 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059171 | ACRIFLAVINRP | 1055 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059181 | PYOCINKILLER | 30 | 0.023 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_059201 | PF03544 | 33 | 0.003 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein |
122 | NH44784_061441 | NH44784_061541 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_061441 | -2 | 10 | 0.983728 | Transcriptional regulator, TetR family | |
NH44784_061451 | -2 | 11 | 0.839864 | Acid phosphatase | |
NH44784_061461 | -2 | 11 | 1.032860 | possible MutT-like domain | |
NH44784_061471 | -2 | 11 | 0.932120 | Selenophosphate-dependent tRNA 2-selenouridine | |
NH44784_061481 | -2 | 11 | 0.612501 | outer membrane autotransporter | |
NH44784_061491 | -3 | 11 | -0.305967 | Signal transduction histidine kinase | |
NH44784_061501 | -1 | 16 | -0.098002 | Probable response regulator | |
NH44784_061511 | 0 | 14 | 0.301988 | periplasmic sensor hybrid histidine kinase | |
NH44784_061521 | 3 | 16 | 0.000002 | hypothetical protein | |
NH44784_061531 | 1 | 13 | 0.087854 | hypothetical protein | |
NH44784_061541 | 1 | 10 | -1.274705 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_061441 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_061481 | PRTACTNFAMLY | 94 | 1e-21 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_061491 | HTHFIS | 68 | 8e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_061501 | HTHFIS | 63 | 8e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_061511 | HTHFIS | 70 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_061541 | RTXTOXINA | 29 | 0.003 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family |
123 | NH44784_062431 | NH44784_062571 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_062431 | -1 | 14 | 1.271708 | Protein secretion chaperonin CsaA | |
NH44784_062441 | -1 | 13 | 0.859241 | Co-activator of prophage gene expression IbrA | |
NH44784_062451 | 0 | 10 | 0.686094 | hypothetical protein | |
NH44784_062461 | -1 | 9 | 0.467741 | Sensory histidine kinase QseC | |
NH44784_062471 | 1 | 10 | -0.508936 | Two-component system response regulator QseB | |
NH44784_062481 | 0 | 10 | -0.464107 | probable membrane protein | |
NH44784_062491 | 0 | 11 | -1.790521 | Putative fimbrial-like protein | |
NH44784_062501 | -1 | 11 | -2.003277 | FIG036507: Fimbriae usher protein StdB | |
NH44784_062511 | -2 | 12 | -2.797830 | Probable fimbrial chaperone protein | |
NH44784_062521 | -3 | 12 | -2.488738 | hypothetical protein | |
NH44784_062531 | -3 | 12 | -2.784607 | hypothetical protein | |
NH44784_062541 | -2 | 11 | -2.973970 | two component response regulator | |
NH44784_062551 | -1 | 12 | -3.129289 | kinase sensor protein | |
NH44784_062561 | 0 | 14 | -2.419401 | DNA-binding response regulator, LuxR family | |
NH44784_062571 | 0 | 13 | -1.991364 | ABC opine/polyamine transporter, periplasmic |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062431 | PF07675 | 27 | 0.017 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062461 | PF06580 | 30 | 0.019 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062471 | HTHFIS | 97 | 2e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062501 | PF00577 | 596 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062521 | BCTERIALGSPF | 24 | 0.028 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062541 | HTHFIS | 67 | 3e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062551 | HTHFIS | 77 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062561 | HTHFIS | 58 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_062571 | MALTOSEBP | 29 | 0.038 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
124 | NH44784_064141 | NH44784_064261 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
NH44784_064141 | 1 | 10 | 0.877953 | Multidrug resistance transporter, Bcr/CflA | |
NH44784_064151 | 1 | 10 | 1.015432 | LSU ribosomal protein L28p | |
NH44784_064161 | 0 | 9 | 1.099003 | LSU ribosomal protein L33p | |
NH44784_064171 | 1 | 10 | 1.726366 | branched-chain amino acid-binding protein | |
NH44784_064181 | 1 | 12 | 1.920235 | inner-membrane translocator | |
NH44784_064191 | 2 | 12 | 0.972967 | Branched-chain amino acid transport ATP-binding | |
NH44784_064201 | 2 | 12 | 0.444725 | Sulfate permease | |
NH44784_064211 | 0 | 11 | 0.248060 | Phosphonopyruvate hydrolase | |
NH44784_064221 | 1 | 11 | 0.206732 | hypothetical protein | |
NH44784_064231 | 0 | 16 | -0.933412 | D-alanyl-D-alanine carboxypeptidase | |
NH44784_064241 | 0 | 19 | -0.965276 | histone-like protein | |
NH44784_064251 | -1 | 16 | -0.032463 | Transcriptional regulator, MarR family | |
NH44784_064261 | -2 | 17 | 0.346418 | MFS permease protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064141 | TCRTETB | 60 | 6e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064161 | IGASERPTASE | 24 | 0.030 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064191 | PF05272 | 28 | 0.041 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064201 | FLGBIOSNFLIP | 29 | 0.029 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064221 | PF05272 | 30 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064231 | BLACTAMASEA | 32 | 0.002 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064241 | DNABINDINGHU | 35 | 2e-05 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
NH44784_064261 | TCRTETA | 52 | 2e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |