| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | HPLT_00265 | HPLT_00435 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_00265 | 6 | 17 | 0.776683 | hypothetical protein | |
| HPLT_00300 | 4 | 16 | 1.595832 | hypothetical protein | |
| HPLT_00315 | 2 | 14 | 1.381247 | hypothetical protein | |
| HPLT_00340 | 1 | 15 | 1.540236 | hypothetical protein | |
| HPLT_00345 | 1 | 13 | 2.187909 | hypothetical protein | |
| HPLT_00370 | 4 | 20 | 3.476873 | urease accessory protein | |
| HPLT_00375 | 4 | 22 | 3.226113 | Urease accessory protein UreG | |
| HPLT_00380 | 3 | 20 | 2.365494 | urease accessory protein (ureF) | |
| HPLT_00385 | 2 | 17 | 2.318247 | urease accessory protein UreE | |
| HPLT_00390 | 3 | 19 | 2.178696 | urea transporter | |
| HPLT_00395 | 0 | 16 | 2.235672 | urease subunit beta | |
| HPLT_00400 | -3 | 10 | 1.673614 | urease subunit alpha | |
| HPLT_00405 | -3 | 10 | 1.204720 | *lipoprotein signal peptidase | |
| HPLT_00410 | 0 | 13 | 2.088902 | phosphoglucosamine mutase | |
| HPLT_00415 | 2 | 15 | 2.294170 | 30S ribosomal protein S20 | |
| HPLT_00420 | 2 | 17 | 2.501367 | peptide chain release factor 1 | |
| HPLT_00425 | 3 | 15 | 1.039316 | hypothetical protein | |
| HPLT_00430 | 2 | 15 | 0.811630 | hypothetical protein | |
| HPLT_00435 | 2 | 16 | 1.242940 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00395 | UREASE | 1043 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 2 | HPLT_01005 | HPLT_01065 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_01005 | -1 | 11 | 3.155848 | fumarate reductase flavoprotein subunit | |
| HPLT_01010 | -2 | 14 | 1.728474 | fumarate reductase cytochrome b-556 subunit | |
| HPLT_01015 | -2 | 16 | 1.905169 | triosephosphate isomerase | |
| HPLT_01020 | -2 | 17 | 3.045858 | enoyl-(acyl carrier protein) reductase | |
| HPLT_01025 | -1 | 17 | 3.194375 | UDP-3-O-[3-hydroxymyristoyl] glucosamine | |
| HPLT_01030 | -2 | 17 | 3.529540 | S-adenosylmethionine synthetase | |
| HPLT_01035 | -2 | 18 | 2.890188 | nucleoside diphosphate kinase | |
| HPLT_01040 | -2 | 20 | 2.504611 | hypothetical protein | |
| HPLT_01045 | 0 | 14 | -2.666426 | 50S ribosomal protein L32 | |
| HPLT_01050 | 0 | 11 | -1.624421 | putative glycerol-3-phosphate acyltransferase | |
| HPLT_01055 | 0 | 12 | -2.595924 | 3-oxoacyl-(acyl carrier protein) synthase III | |
| HPLT_01060 | 1 | 13 | -3.511827 | hypothetical protein | |
| HPLT_01065 | 1 | 12 | -3.145268 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01020 | DHBDHDRGNASE | 55 | 3e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 3 | HPLT_01590 | HPLT_01735 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_01590 | 2 | 14 | 0.181584 | hypothetical protein | |
| HPLT_01595 | 0 | 13 | 0.041582 | polysaccharide deacetylase | |
| HPLT_01600 | 0 | 14 | -1.597347 | typeII restriction enzyme | |
| HPLT_01605 | 2 | 11 | -0.355203 | DNA methylase | |
| HPLT_01610 | 0 | 12 | 0.036467 | hypothetical protein | |
| HPLT_01615 | 0 | 14 | 0.002935 | putative cobalamin syntheis protein, P47K | |
| HPLT_01620 | -1 | 13 | -0.721703 | nitrite extrusion protein | |
| HPLT_01625 | 3 | 15 | -1.347119 | hypothetical protein | |
| HPLT_01630 | 2 | 16 | -1.085385 | putative heme iron utilization protein | |
| HPLT_01635 | 1 | 15 | -1.143246 | arginyl-tRNA synthetase | |
| HPLT_01640 | 2 | 14 | -0.873702 | Sec-independent protein translocase protein | |
| HPLT_01645 | 1 | 13 | -1.080571 | guanylate kinase | |
| HPLT_01650 | 1 | 12 | -1.155115 | poly E-rich protein | |
| HPLT_01655 | -3 | 12 | -2.021940 | nuclease NucT | |
| HPLT_01660 | 0 | 11 | -1.974026 | outer membrane protein HorC | |
| HPLT_01665 | 2 | 14 | -2.369974 | flagellar basal body L-ring protein | |
| HPLT_01670 | 3 | 14 | -2.076801 | putative acylneuraminate cytidylyltransferase | |
| HPLT_01675 | 2 | 12 | -1.289424 | putative acylneuraminate cytidylyltransferase | |
| HPLT_01680 | 2 | 12 | -1.090006 | flagellar biosynthesis protein G | |
| HPLT_01685 | 1 | 14 | 0.371853 | tetraacyldisaccharide 4'-kinase | |
| HPLT_01690 | 1 | 16 | 1.204720 | NAD synthetase | |
| HPLT_01695 | 0 | 17 | 1.106708 | *ketol-acid reductoisomerase | |
| HPLT_01700 | 1 | 17 | 0.096228 | cell division inhibitor | |
| HPLT_01705 | 3 | 14 | -1.204795 | cell division topological specificity factor | |
| HPLT_01710 | 2 | 14 | -0.945234 | hypothetical protein | |
| HPLT_01715 | 2 | 16 | -1.912179 | Holliday junction resolvase-like protein | |
| HPLT_01720 | 0 | 19 | -2.885128 | cysteine-rich protein C | |
| HPLT_01725 | 2 | 22 | -2.116710 | hypothetical protein | |
| HPLT_01730 | 2 | 23 | -0.694929 | hypothetical protein | |
| HPLT_01735 | 2 | 25 | -0.090022 | lysozyme-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01620 | TCRTETB | 31 | 0.006 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01645 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01650 | IGASERPTASE | 72 | 2e-15 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01665 | FLGLRINGFLGH | 191 | 3e-63 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01680 | SACTRNSFRASE | 28 | 0.019 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 4 | HPLT_02325 | HPLT_02415 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_02325 | 1 | 14 | -3.161804 | molybdenum ABC transporter ModB | |
| HPLT_02330 | 0 | 10 | -1.373349 | molybdenum ABC transporter ModD | |
| HPLT_02335 | 0 | 10 | -1.624211 | glutamyl-tRNA synthetase | |
| HPLT_02340 | 0 | 13 | -2.425407 | hypothetical protein | |
| HPLT_02345 | 0 | 13 | -1.970586 | outer membrane protein | |
| HPLT_02350 | -1 | 12 | -1.429949 | DD-heptosyltransferase | |
| HPLT_02355 | 3 | 13 | 0.703846 | GTP-binding protein | |
| HPLT_02360 | 6 | 16 | -0.244492 | type II adenine specific DNA methyltransferase | |
| HPLT_02365 | 6 | 16 | 0.513503 | type II restriction endonuclease | |
| HPLT_02370 | 6 | 18 | 0.998826 | type II DNA modification enzyme | |
| HPLT_02390 | 2 | 16 | -0.195489 | catalase-like protein | |
| HPLT_02395 | 3 | 18 | -0.841102 | outer membrane protein HofC | |
| HPLT_02400 | 4 | 14 | -1.838812 | outer membrane protein HofD | |
| HPLT_02405 | 7 | 17 | -2.046489 | hypothetical protein | |
| HPLT_02410 | 6 | 16 | -2.405868 | hypothetical protein | |
| HPLT_02415 | 3 | 15 | -1.754791 | mosaic CUP0956/HP1116/jhp1044-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02330 | PF05272 | 30 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02355 | TCRTETOQM | 198 | 2e-57 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 5 | HPLT_02560 | HPLT_02695 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_02560 | 2 | 13 | -2.105377 | GTP-binding protein Era | |
| HPLT_02565 | 3 | 13 | -2.320915 | hypothetical protein | |
| HPLT_02570 | 6 | 18 | -2.331753 | hypothetical protein | |
| HPLT_02575 | 9 | 19 | -2.339435 | cag pathogenicity island protein (cag1) | |
| HPLT_02580 | 8 | 18 | -2.602979 | hypothetical protein | |
| HPLT_02585 | 10 | 17 | -2.220867 | cag pathogenicity island protein 3 | |
| HPLT_02590 | 10 | 18 | -2.794161 | cag pathogenicity island protein gamma | |
| HPLT_02595 | 9 | 20 | -2.811718 | cag pathogenicity island protein 5 | |
| HPLT_02600 | 9 | 21 | -3.169689 | cag pathogenicity island protein alpha | |
| HPLT_02605 | 9 | 21 | -3.355685 | cag pathogenicity island protein Z | |
| HPLT_02610 | 10 | 21 | -3.169006 | cag pathogenicity island protein (cag7, cagY) | |
| HPLT_02620 | 10 | 28 | -4.453046 | cag pathogenicity island protein X VirB9-like | |
| HPLT_02625 | 9 | 26 | -4.435342 | cag pathogenicity island protein W | |
| HPLT_02630 | 11 | 23 | -4.911306 | cag pathogenicity island protein V | |
| HPLT_02635 | 11 | 23 | -4.672320 | cag pathogenicity island protein U | |
| HPLT_02640 | 9 | 20 | -3.606857 | CAG pathogenicity island protein 12 | |
| HPLT_02645 | 7 | 18 | -2.881703 | CAG pathogenicity island protein 13 | |
| HPLT_02650 | 5 | 18 | -2.555220 | cag pathogenicity island protein M | |
| HPLT_02655 | 6 | 20 | -2.885446 | cag pathogenicity island protein (cag17) | |
| HPLT_02660 | 5 | 20 | -2.828020 | cag pathogenicity island protein L | |
| HPLT_02665 | 5 | 20 | -3.095248 | cag pathogenicity island protein I | |
| HPLT_02670 | 6 | 20 | -3.216522 | cag pathogenicity island protein H | |
| HPLT_02675 | 7 | 22 | -4.105766 | cag pathogenicity island protein G | |
| HPLT_02680 | 8 | 22 | -3.572013 | cag pathogenicity island protein (cagF, cag22) | |
| HPLT_02685 | 5 | 20 | -2.708784 | cag pathogenicity island protein E VirB4-like | |
| HPLT_02690 | 4 | 18 | -1.385636 | cag pathogenicity island protein D | |
| HPLT_02695 | 3 | 18 | -0.815336 | cag pathogenicity island protein C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02560 | PF03944 | 33 | 0.002 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02585 | PF07201 | 30 | 0.023 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02610 | IGASERPTASE | 42 | 3e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02620 | TYPE4SSCAGX | 873 | 0.0 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02630 | PF04335 | 118 | 6e-35 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02685 | ACRIFLAVINRP | 33 | 0.008 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 6 | HPLT_03370 | HPLT_03475 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_03370 | 2 | 11 | 0.433172 | methylated-DNA--protein-cysteine | |
| HPLT_03375 | 2 | 10 | 1.085782 | hypothetical protein | |
| HPLT_03380 | 1 | 11 | 1.438459 | putative oxidoreductase | |
| HPLT_03385 | 1 | 11 | 1.299343 | ribonucleotide-diphosphate reductase subunit | |
| HPLT_03390 | 6 | 15 | 0.975654 | hypothetical protein | |
| HPLT_03395 | 3 | 12 | 0.457647 | hypothetical protein | |
| HPLT_03400 | 1 | 12 | -0.100297 | bifunctional N-acetylglucosamine-1-phosphate | |
| HPLT_03405 | 2 | 13 | -2.135247 | flagellar biosynthesis protein FliP | |
| HPLT_03410 | 2 | 15 | -3.294268 | flagellar biosynthesis protein FliP | |
| HPLT_03415 | 2 | 16 | -3.567340 | iron(III) dicitrate transport protein | |
| HPLT_03420 | -1 | 17 | -3.118371 | iron(II) transport protein | |
| HPLT_03425 | 0 | 17 | -3.043282 | hypothetical protein | |
| HPLT_03430 | 1 | 17 | -2.110592 | putative type II cytosine specific | |
| HPLT_03435 | 0 | 13 | 0.687623 | putative type II restriction enzyme | |
| HPLT_03440 | 1 | 12 | 2.792776 | hypothetical protein | |
| HPLT_03445 | 1 | 13 | 3.925367 | acetyl-CoA acetyltransferase | |
| HPLT_03450 | 3 | 12 | 3.808842 | succinyl-CoA-transferase subunit A | |
| HPLT_03455 | 3 | 13 | 3.657184 | succinyl-CoA-transferase subunit B | |
| HPLT_03460 | 3 | 13 | 3.275260 | short-chain fatty acids transporter | |
| HPLT_03465 | 3 | 13 | 2.505008 | outer membrane protein | |
| HPLT_03470 | 3 | 13 | 2.796901 | hydantoin utilization protein A | |
| HPLT_03475 | 2 | 11 | 1.538431 | acetone carboxylase subunit alpha |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_03395 | PHAGEIV | 27 | 0.021 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_03410 | FLGBIOSNFLIP | 276 | 2e-96 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| 7 | HPLT_03575 | HPLT_03650 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_03575 | 3 | 13 | -0.682988 | RNA polymerase factor sigma-54 | |
| HPLT_03580 | 2 | 12 | 0.156691 | ABC-type transport system, ATP binding protein | |
| HPLT_03585 | 1 | 12 | 0.460519 | hypothetical protein | |
| HPLT_03590 | 1 | 11 | 1.564084 | DNA polymerase III subunits gamma and tau | |
| HPLT_03595 | 2 | 13 | 2.934174 | hypothetical protein | |
| HPLT_03600 | 1 | 16 | 2.673491 | hypothetical protein | |
| HPLT_03605 | 2 | 15 | 2.562741 | hypothetical protein | |
| HPLT_03610 | 1 | 14 | 2.470405 | outer membrane protein SabA | |
| HPLT_03615 | 0 | 11 | 1.805262 | anaerobic C4-dicarboxylate transporter | |
| HPLT_03620 | -2 | 10 | -0.171285 | L-asparaginase II | |
| HPLT_03625 | -2 | 12 | -1.347451 | outer membrane protein SabB | |
| HPLT_03630 | 0 | 12 | -2.186863 | outer membrane protein | |
| HPLT_03635 | 1 | 15 | -3.339471 | putative transcriptional regulator | |
| HPLT_03640 | 1 | 17 | -4.493741 | tRNA(Ile)-lysidine synthase | |
| HPLT_03645 | 2 | 20 | -4.597002 | hypothetical protein | |
| HPLT_03650 | 2 | 13 | -2.508940 | hypothetical protein |
| 8 | HPLT_04400 | HPLT_04440 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_04400 | 2 | 13 | 3.170042 | hydrogenase nickel incorporation protein | |
| HPLT_04405 | 2 | 12 | 3.033441 | flagellar hook protein FlgE | |
| HPLT_04410 | 1 | 15 | 2.200679 | CDP-diacylglycerol pyrophosphatase | |
| HPLT_04415 | 1 | 14 | 2.220151 | alkylphosphonate uptake protein | |
| HPLT_04420 | 2 | 14 | 2.128820 | hypothetical protein | |
| HPLT_04425 | 2 | 14 | 2.224632 | hypothetical protein | |
| HPLT_04430 | 3 | 15 | 1.788409 | catalase | |
| HPLT_04435 | 2 | 15 | 1.234478 | iron-regulated outer membrane protein | |
| HPLT_04440 | 2 | 18 | -0.916745 | Holliday junction resolvase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_04405 | FLGHOOKAP1 | 42 | 7e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 9 | HPLT_04970 | HPLT_05085 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_04970 | 3 | 14 | 0.833852 | cell division protein FtsA | |
| HPLT_04975 | 4 | 18 | -0.567688 | cell division protein FtsZ | |
| HPLT_04980 | 2 | 15 | -4.037011 | hypothetical protein | |
| HPLT_04985 | 3 | 18 | -4.303752 | mechanosensitive channel MscS | |
| HPLT_04990 | 3 | 22 | -4.931325 | hypothetical protein | |
| HPLT_05005 | 2 | 23 | -5.376358 | hypothetical protein | |
| HPLT_05010 | 2 | 23 | -5.499895 | hypothetical protein | |
| HPLT_05030 | 2 | 24 | -5.040655 | hypothetical protein | |
| HPLT_05045 | 2 | 26 | -5.019397 | putative serine/threonine kinase | |
| HPLT_05050 | 1 | 29 | -5.557094 | protein phosphatase 2 C-like protein (ptc1) | |
| HPLT_05055 | 3 | 31 | -6.485159 | hypothetical protein | |
| HPLT_05060 | 7 | 34 | -6.611260 | hypothetical protein | |
| HPLT_05065 | 4 | 19 | -4.393478 | hypothetical protein | |
| HPLT_05070 | 2 | 17 | -4.344892 | hypothetical protein | |
| HPLT_05080 | 0 | 15 | -3.579974 | hypothetical protein | |
| HPLT_05085 | 1 | 14 | -3.044741 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_04970 | SHAPEPROTEIN | 41 | 8e-06 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 10 | HPLT_05460 | HPLT_05535 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_05460 | 4 | 10 | 1.181184 | glucokinase | |
| HPLT_05465 | 6 | 12 | -0.240327 | NADP-dependent alcohol dehydrogenase | |
| HPLT_05470 | 3 | 15 | -0.686033 | hypothetical protein | |
| HPLT_05475 | 3 | 13 | -0.262221 | LPS biosynthesis protein | |
| HPLT_05480 | 2 | 14 | 1.574175 | hypothetical protein | |
| HPLT_05485 | 2 | 13 | 2.203307 | hypothetical protein | |
| HPLT_05490 | 0 | 14 | 2.902620 | outer membrane protein (omp23) | |
| HPLT_05495 | 0 | 11 | 2.567438 | pyruvate flavodoxin oxidoreductase subunit | |
| HPLT_05500 | -1 | 9 | 2.324892 | pyruvate flavodoxin oxidoreductase subunit | |
| HPLT_05505 | -2 | 9 | 1.608357 | pyruvate flavodoxin oxidoreductase subunit | |
| HPLT_05510 | -3 | 12 | 0.230441 | pyruvate ferredoxin oxidoreductase, beta | |
| HPLT_05515 | 1 | 13 | -1.266108 | adenylosuccinate lyase | |
| HPLT_05520 | 3 | 15 | -2.039841 | putative outer membrane protein; putative signal | |
| HPLT_05525 | 5 | 17 | -1.992028 | excinuclease ABC subunit B | |
| HPLT_05530 | 7 | 21 | -3.254696 | hypothetical protein | |
| HPLT_05535 | 6 | 21 | -3.242679 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05495 | YERSSTKINASE | 29 | 0.010 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 11 | HPLT_05580 | HPLT_05605 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_05580 | 2 | 19 | -1.106837 | type II DNA modification enzyme | |
| HPLT_05585 | 3 | 16 | -0.557652 | hypothetical protein | |
| HPLT_05590 | 2 | 13 | -1.642555 | hypothetical protein | |
| HPLT_05595 | 3 | 14 | -1.512231 | FKBP-type peptidyl-prolyl cis-trans isomerase | |
| HPLT_05600 | 3 | 15 | -2.353125 | hypothetical protein | |
| HPLT_05605 | 3 | 14 | -2.164213 | peptidoglycan-associated lipoprotein precursor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05605 | OMPADOMAIN | 148 | 4e-46 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 12 | HPLT_05660 | HPLT_05705 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_05660 | 1 | 19 | -3.582360 | F0F1 ATP synthase subunit B' | |
| HPLT_05665 | 2 | 19 | -3.080526 | putative plasmid replication-partition related | |
| HPLT_05670 | 2 | 21 | -3.757790 | chromosome partitioning protein | |
| HPLT_05675 | 2 | 22 | -4.245771 | biotin--protein ligase | |
| HPLT_05680 | 3 | 21 | -3.825304 | methionyl-tRNA formyltransferase | |
| HPLT_05685 | 2 | 22 | -3.887184 | ATPase | |
| HPLT_05690 | 1 | 18 | -0.262221 | hypothetical protein | |
| HPLT_05695 | 1 | 20 | -1.625282 | hypothetical protein | |
| HPLT_05700 | 2 | 18 | -0.282803 | hypothetical protein | |
| HPLT_05705 | 2 | 18 | 0.132998 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05670 | PF07675 | 31 | 0.004 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05680 | FERRIBNDNGPP | 33 | 0.001 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05685 | CHANLCOLICIN | 37 | 2e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05690 | IGASERPTASE | 43 | 2e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 13 | HPLT_06845 | HPLT_06945 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_06845 | -1 | 12 | -3.072130 | hypothetical protein | |
| HPLT_06850 | -1 | 12 | -4.622657 | signal-transducing protein, histidine kinase | |
| HPLT_06855 | -1 | 11 | -4.670610 | response regulator | |
| HPLT_06860 | -2 | 11 | -3.028161 | type IIS restriction enzyme R protein (MBOIIR) | |
| HPLT_06865 | -2 | 10 | -0.727360 | type IIS restriction enzyme M1 protein (mod) | |
| HPLT_06870 | -2 | 12 | 0.369165 | type IIS restriction enzyme M2 protein (mod) | |
| HPLT_06875 | -2 | 12 | 1.190274 | type III restriction enzyme R protein | |
| HPLT_06880 | -1 | 13 | 2.476112 | rod shape-determining protein MreC | |
| HPLT_06885 | 0 | 14 | 3.009640 | rod shape-determining protein MreB | |
| HPLT_06890 | -1 | 12 | 0.962325 | ATP-dependent protease ATP-binding subunit ClpX | |
| HPLT_06895 | -2 | 10 | 1.245751 | UDP-N-acetylglucosamine acyltransferase | |
| HPLT_06900 | -2 | 11 | 1.066025 | (3R)-hydroxymyristoyl-ACP dehydratase | |
| HPLT_06905 | -3 | 10 | 0.378315 | flagellar assembly protein FliW | |
| HPLT_06910 | -2 | 8 | -1.650822 | hypothetical protein | |
| HPLT_06915 | -2 | 10 | -2.549260 | hypothetical protein | |
| HPLT_06920 | -3 | 9 | -1.936423 | ATP-dependent protease La | |
| HPLT_06925 | -2 | 9 | -3.252856 | prephenate dehydrogenase | |
| HPLT_06930 | -2 | 10 | -4.091232 | putative endonuclease G | |
| HPLT_06935 | -1 | 11 | -4.389863 | type III restriction-modification system: | |
| HPLT_06940 | 1 | 14 | -3.446267 | hypothetical protein | |
| HPLT_06945 | 3 | 20 | -0.929665 | biotin synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_06855 | HTHFIS | 91 | 2e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_06885 | SHAPEPROTEIN | 474 | e-171 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_06890 | HTHFIS | 41 | 8e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_06925 | SHIGARICIN | 29 | 0.020 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| 14 | HPLT_07285 | HPLT_07375 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_07285 | 2 | 12 | 0.809698 | putative ABC transport system permease protein | |
| HPLT_07290 | 2 | 11 | 0.635975 | outer membrane protein | |
| HPLT_07295 | 0 | 9 | 0.097757 | branched-chain amino acid aminotransferase | |
| HPLT_07300 | 1 | 10 | -0.648664 | outer membrane protein | |
| HPLT_07305 | 1 | 11 | -1.074622 | DNA polymerase I (polA) | |
| HPLT_07310 | 0 | 18 | -0.569357 | type II restriction enzyme | |
| HPLT_07315 | 0 | 16 | 0.274395 | type II restriction enzyme | |
| HPLT_07320 | 1 | 17 | 0.186269 | type IIS restriction enzyme M protein (mod) | |
| HPLT_07325 | 5 | 21 | 0.836562 | hypothetical protein | |
| HPLT_07330 | 3 | 14 | 0.344210 | thymidylate kinase | |
| HPLT_07335 | 3 | 12 | 0.380010 | phosphopantetheine adenylyltransferase | |
| HPLT_07340 | 3 | 13 | 0.568229 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | |
| HPLT_07345 | 3 | 13 | 0.405642 | hypothetical protein | |
| HPLT_07350 | 3 | 13 | 0.453001 | flagellar basal body P-ring biosynthesis protein | |
| HPLT_07355 | 2 | 11 | 0.614775 | DNA helicase II (uvrD) | |
| HPLT_07360 | 0 | 12 | 0.754250 | hypothetical protein | |
| HPLT_07365 | 0 | 12 | 0.999044 | seryl-tRNA synthetase | |
| HPLT_07370 | 0 | 15 | 0.227424 | hypothetical protein | |
| HPLT_07375 | 2 | 13 | -0.137527 | exodeoxyribonuclease VII small subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07335 | LPSBIOSNTHSS | 223 | 3e-78 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 15 | HPLT_07435 | HPLT_07465 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_07435 | 0 | 9 | -3.165415 | UDP-N-acetylmuramoylalanyl-D-glutamate--2, | |
| HPLT_07440 | 1 | 10 | -4.822786 | transaldolase | |
| HPLT_07445 | 0 | 13 | -6.030997 | 50S ribosomal protein L25/general stress protein | |
| HPLT_07450 | 1 | 12 | -4.646221 | peptidyl-tRNA hydrolase | |
| HPLT_07455 | 1 | 13 | -5.168422 | hypothetical protein | |
| HPLT_07460 | 3 | 17 | -5.550959 | type II methylase | |
| HPLT_07465 | 1 | 11 | -3.041160 | DNA adenine methylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07435 | DHBDHDRGNASE | 31 | 0.009 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07450 | PF06340 | 28 | 0.025 | Vibrio cholerae toxin co-regulated pilus biosynthesis pr... | |
>PF06340#Vibrio cholerae toxin co-regulated pilus biosynthesis | |||||
| 16 | HPLT_07510 | HPLT_07880 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_07510 | 2 | 13 | 2.685942 | hypothetical protein | |
| HPLT_07515 | 1 | 13 | 2.125072 | ferrodoxin-like protein | |
| HPLT_07520 | -1 | 11 | 1.823168 | putative glycerol-3-phosphate acyltransferase | |
| HPLT_07525 | -1 | 12 | 1.044514 | dihydroneopterin aldolase | |
| HPLT_07530 | -1 | 11 | 1.169018 | FrpB-like protein | |
| HPLT_07535 | -1 | 12 | -0.270882 | iron-regulated outer membrane protein | |
| HPLT_07540 | 0 | 12 | -2.887937 | selenocysteine synthase | |
| HPLT_07545 | 0 | 10 | -2.879149 | transcription elongation factor NusA | |
| HPLT_07550 | 0 | 11 | -3.449737 | hypothetical protein | |
| HPLT_07555 | 0 | 10 | -2.924367 | hypothetical protein | |
| HPLT_07560 | 0 | 9 | -3.011431 | type IIS R-M system restriction/modification | |
| HPLT_07565 | 1 | 12 | -3.088400 | type III restriction enzyme R protein (res) | |
| HPLT_07570 | 1 | 11 | -2.583614 | type III R-M system modification enzyme | |
| HPLT_07575 | 1 | 9 | -2.308631 | type III DNA modification enzyme | |
| HPLT_07580 | 0 | 13 | -1.481992 | ATP-dependent DNA helicase RecG | |
| HPLT_07585 | 0 | 14 | -1.291000 | hypothetical protein | |
| HPLT_07590 | 0 | 14 | -1.116616 | hypothetical protein | |
| HPLT_07595 | 1 | 13 | -0.477324 | exodeoxyribonuclease III | |
| HPLT_07600 | 2 | 13 | -0.239335 | *hypothetical protein | |
| HPLT_07605 | 3 | 15 | -0.275115 | chromosomal replication initiation protein | |
| HPLT_07610 | 4 | 21 | -0.820032 | purine nucleoside phosphorylase (punB) | |
| HPLT_07615 | 4 | 21 | -1.071038 | hypothetical protein | |
| HPLT_07620 | 2 | 18 | -1.597771 | glucosamine--fructose-6-phosphate | |
| HPLT_07625 | 8 | 19 | -5.890354 | FAD-dependent thymidylate synthase | |
| HPLT_07630 | 11 | 24 | -7.487467 | hypothetical protein | |
| HPLT_07635 | 11 | 25 | -7.983819 | hypothetical protein | |
| HPLT_07640 | 11 | 26 | -7.840093 | type I R-M system S protein | |
| HPLT_07645 | 12 | 27 | -7.803156 | putative type I restriction enzyme specificity | |
| HPLT_07650 | 11 | 28 | -6.893871 | relaxase | |
| HPLT_07655 | 10 | 31 | -6.882841 | integrase/recombinase (xerD) | |
| HPLT_07660 | 10 | 34 | -6.585583 | hypothetical protein | |
| HPLT_07665 | 7 | 31 | -5.408298 | hypothetical protein | |
| HPLT_07675 | 3 | 25 | -4.878857 | hypothetical protein | |
| HPLT_07695 | 3 | 22 | -5.298922 | type IV secretion system protein TrbL | |
| HPLT_07720 | 8 | 20 | -6.366624 | hypothetical protein | |
| HPLT_07725 | 9 | 22 | -5.978840 | hypothetical protein | |
| HPLT_07730 | 10 | 22 | -5.826402 | hypothetical protein | |
| HPLT_07735 | 10 | 23 | -5.875280 | hypothetical protein | |
| HPLT_07740 | 8 | 25 | -6.569977 | hypothetical protein | |
| HPLT_07745 | 8 | 26 | -7.317675 | hypothetical protein | |
| HPLT_07750 | 10 | 27 | -6.656438 | hypothetical protein | |
| HPLT_07765 | 10 | 29 | -6.669416 | hypothetical protein | |
| HPLT_07770 | 11 | 30 | -6.398324 | hypothetical protein | |
| HPLT_07775 | 10 | 29 | -6.959707 | hypothetical protein | |
| HPLT_07780 | 10 | 31 | -7.219621 | hypothetical protein | |
| HPLT_07785 | 9 | 31 | -6.821678 | hypothetical protein | |
| HPLT_07790 | 5 | 17 | -3.943674 | hypothetical protein | |
| HPLT_07795 | 5 | 17 | -4.028847 | DNA topoisomerase I | |
| HPLT_07800 | 3 | 14 | -3.641600 | hypothetical protein | |
| HPLT_07805 | 3 | 14 | -3.373600 | hypothetical protein | |
| HPLT_07810 | 3 | 13 | -3.000127 | hypothetical protein | |
| HPLT_07815 | 1 | 12 | -2.240629 | adenine specific DNA methyltransferase | |
| HPLT_07820 | -1 | 10 | -1.494395 | VirD4 coupling protein | |
| HPLT_07825 | -2 | 10 | -0.880704 | typeI restriction enzyme R protein | |
| HPLT_07830 | -2 | 10 | 0.334312 | hypothetical protein | |
| HPLT_07845 | -2 | 10 | 0.613904 | arginase | |
| HPLT_07850 | -2 | 10 | -0.502554 | alanine dehydrogenase | |
| HPLT_07855 | 0 | 11 | -1.392861 | hypothetical protein | |
| HPLT_07860 | 2 | 12 | -1.338246 | hypothetical protein | |
| HPLT_07865 | 2 | 13 | -2.450098 | probable inorganic polyphosphate/ATP-NAD kinase | |
| HPLT_07870 | 2 | 15 | -3.499481 | DNA repair protein RecN | |
| HPLT_07875 | 0 | 20 | -4.933928 | fibronectin/fibrinogen-binding protein | |
| HPLT_07880 | 0 | 23 | -3.421149 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07605 | HTHFIS | 35 | 5e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07815 | FbpA_PF05833 | 34 | 0.010 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07875 | FbpA_PF05833 | 111 | 1e-28 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| 17 | HPLT_00200 | HPLT_00225 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_00200 | -3 | 12 | 0.181468 | comB8 competence protein | |
| HPLT_00205 | -3 | 12 | 0.042769 | type IV secretion system protein VirB9 | |
| HPLT_00210 | -2 | 13 | 0.932773 | ComB10 competence protein | |
| HPLT_00215 | -1 | 10 | 0.911426 | mannose-6-phosphate isomerase | |
| HPLT_00220 | -2 | 11 | 1.138786 | GDP-D-mannose dehydratase | |
| HPLT_00225 | -1 | 10 | -0.642235 | nodulation protein (nolK) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00200 | PF04335 | 133 | 1e-40 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00205 | TYPE4SSCAGX | 31 | 0.010 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00220 | NUCEPIMERASE | 88 | 2e-21 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00225 | NUCEPIMERASE | 51 | 2e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 18 | HPLT_00555 | HPLT_00585 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_00555 | 1 | 11 | 3.122099 | methyl-accepting chemotaxis protein (tlpB) | |
| HPLT_00560 | 0 | 9 | 3.517017 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | |
| HPLT_00565 | -3 | 10 | 4.286122 | S-ribosylhomocysteinase | |
| HPLT_00570 | -2 | 12 | 3.367411 | cystathionine gamma-synthase/cystathionine | |
| HPLT_00575 | -1 | 16 | 2.157813 | cysteine synthetase | |
| HPLT_00580 | 1 | 18 | 1.246252 | hypothetical protein | |
| HPLT_00585 | 0 | 12 | 0.389408 | molecular chaperone DnaK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00555 | OMS28PORIN | 30 | 0.019 | OMS28 porin signature. | |
>OMS28PORIN#OMS28 porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00565 | LUXSPROTEIN | 225 | 7e-79 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00570 | TETREPRESSOR | 28 | 0.043 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00585 | SHAPEPROTEIN | 149 | 3e-42 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 19 | HPLT_00615 | HPLT_00640 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_00615 | -2 | 10 | 0.649560 | flagellin B | |
| HPLT_00620 | -1 | 11 | -0.632399 | DNA topoisomerase I | |
| HPLT_00625 | -1 | 11 | -0.266544 | hypothetical protein | |
| HPLT_00630 | -1 | 10 | -0.301000 | hypothetical protein | |
| HPLT_00635 | -1 | 10 | 0.373904 | hypothetical protein | |
| HPLT_00640 | 0 | 12 | 1.794813 | phosphoenolpyruvate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00615 | FLAGELLIN | 286 | 7e-93 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00630 | IGASERPTASE | 30 | 0.014 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00635 | IGASERPTASE | 40 | 1e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_00640 | PHPHTRNFRASE | 294 | 3e-92 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 20 | HPLT_01265 | HPLT_01300 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_01265 | -2 | 15 | 1.314221 | neutrophil activating protein (napA) | |
| HPLT_01270 | -3 | 14 | 1.082513 | putative signal-transducing protein AtoS, | |
| HPLT_01275 | -3 | 13 | 1.968618 | hypothetical protein | |
| HPLT_01280 | -3 | 13 | 2.473487 | flagellar basal body P-ring protein | |
| HPLT_01285 | -2 | 12 | 2.160025 | ATP-dependent RNA helicase | |
| HPLT_01290 | -1 | 10 | 1.807774 | hypothetical protein | |
| HPLT_01295 | -2 | 10 | 1.392212 | hypothetical protein | |
| HPLT_01300 | -2 | 10 | 2.407458 | peptide/nickel transport system ATP-binding |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01265 | HELNAPAPROT | 150 | 2e-49 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01270 | PF06580 | 30 | 0.014 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01280 | FLGPRINGFLGI | 364 | e-127 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01285 | SECA | 30 | 0.026 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01300 | HTHFIS | 31 | 0.008 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 21 | HPLT_01645 | HPLT_01680 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_01645 | 1 | 13 | -1.080571 | guanylate kinase | |
| HPLT_01650 | 1 | 12 | -1.155115 | poly E-rich protein | |
| HPLT_01655 | -3 | 12 | -2.021940 | nuclease NucT | |
| HPLT_01660 | 0 | 11 | -1.974026 | outer membrane protein HorC | |
| HPLT_01665 | 2 | 14 | -2.369974 | flagellar basal body L-ring protein | |
| HPLT_01670 | 3 | 14 | -2.076801 | putative acylneuraminate cytidylyltransferase | |
| HPLT_01675 | 2 | 12 | -1.289424 | putative acylneuraminate cytidylyltransferase | |
| HPLT_01680 | 2 | 12 | -1.090006 | flagellar biosynthesis protein G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01645 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01650 | IGASERPTASE | 72 | 2e-15 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01665 | FLGLRINGFLGH | 191 | 3e-63 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01680 | SACTRNSFRASE | 28 | 0.019 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 22 | HPLT_01785 | HPLT_01825 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_01785 | -3 | 10 | 0.765528 | flagellar MS-ring protein | |
| HPLT_01790 | -3 | 11 | 0.987301 | flagellar motor switch protein G | |
| HPLT_01795 | -2 | 11 | 1.053508 | flagellar assembly protein H | |
| HPLT_01800 | -1 | 9 | 1.542401 | 1-deoxy-D-xylulose-5-phosphate synthase | |
| HPLT_01805 | -2 | 10 | -0.982979 | GTP-binding protein LepA | |
| HPLT_01810 | -1 | 11 | -0.606667 | hypothetical protein | |
| HPLT_01815 | 0 | 12 | -0.298125 | hypothetical protein | |
| HPLT_01820 | 1 | 12 | -0.564411 | flagellar basal-body rod protein | |
| HPLT_01825 | 1 | 11 | -0.932949 | alpha-ketoglutarate permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01785 | FLGMRINGFLIF | 557 | 0.0 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01790 | FLGMOTORFLIG | 351 | e-123 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01805 | TCRTETOQM | 112 | 3e-28 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01820 | FLGHOOKAP1 | 30 | 0.009 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_01825 | TCRTETB | 41 | 8e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 23 | HPLT_02530 | HPLT_02560 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_02530 | -1 | 8 | -0.973098 | urease-enhancing factor | |
| HPLT_02535 | -1 | 8 | -1.179741 | glutamine synthetase | |
| HPLT_02540 | 0 | 10 | -1.970054 | hypothetical protein | |
| HPLT_02545 | -2 | 8 | -0.823429 | 50S ribosomal protein L9 | |
| HPLT_02550 | -2 | 10 | -1.133598 | ATP-dependent protease peptidase subunit | |
| HPLT_02555 | -1 | 12 | -2.196062 | ATP-dependent protease ATP-binding subunit HslU | |
| HPLT_02560 | 2 | 13 | -2.105377 | GTP-binding protein Era |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02530 | VACJLIPOPROT | 26 | 0.006 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02540 | SECA | 31 | 0.024 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02555 | HTHFIS | 29 | 0.047 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02560 | PF03944 | 33 | 0.002 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
| 24 | HPLT_02875 | HPLT_02910 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_02875 | 1 | 16 | -1.200300 | hypothetical protein | |
| HPLT_02880 | 1 | 16 | -1.298297 | hypothetical protein | |
| HPLT_02885 | 1 | 15 | -0.535136 | hypothetical protein | |
| HPLT_02890 | 1 | 17 | -0.439080 | dihydroorotase | |
| HPLT_02895 | 0 | 16 | -2.735385 | putative siderophore-mediated iron transport | |
| HPLT_02900 | -2 | 14 | -2.881281 | hypothetical protein | |
| HPLT_02905 | -1 | 14 | -2.296079 | flagellar motor switch protein | |
| HPLT_02910 | -1 | 13 | -0.944562 | endonuclease III |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02875 | TYPE3IMSPROT | 30 | 0.003 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02895 | TONBPROTEIN | 49 | 5e-09 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02905 | FLGMOTORFLIN | 99 | 2e-30 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_02910 | OMS28PORIN | 29 | 0.017 | OMS28 porin signature. | |
>OMS28PORIN#OMS28 porin signature. | |||||
| 25 | HPLT_03015 | HPLT_03050 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_03015 | 2 | 8 | -0.298185 | membrane fusion protein (mtrC) | |
| HPLT_03020 | 2 | 8 | -0.440552 | cytoplasmic pump protein of the hefABC efflux | |
| HPLT_03025 | 2 | 10 | -1.279745 | hypothetical protein | |
| HPLT_03030 | 1 | 10 | -1.138772 | putative vacuolating cytotoxin VacA | |
| HPLT_03035 | 0 | 17 | -2.642397 | ABC-type multidrug transport system, permease | |
| HPLT_03040 | -2 | 12 | -0.761795 | ABC transporter ATP-binding protein | |
| HPLT_03045 | -1 | 12 | 0.203247 | hypothetical protein | |
| HPLT_03050 | -1 | 11 | 0.238786 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_03015 | RTXTOXIND | 51 | 2e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_03020 | ACRIFLAVINRP | 893 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_03030 | VACCYTOTOXIN | 281 | 1e-78 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_03050 | LCRVANTIGEN | 30 | 0.001 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| 26 | HPLT_04580 | HPLT_04615 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_04580 | 1 | 16 | 1.499580 | acetate kinase | |
| HPLT_04585 | 1 | 16 | 1.881081 | Acetate kinase | |
| HPLT_04590 | 0 | 15 | 2.190834 | phosphate acetyltransferase | |
| HPLT_04595 | 0 | 14 | 0.938188 | phosphotransacetylase | |
| HPLT_04600 | 2 | 15 | 0.347601 | phosphotransacetylase | |
| HPLT_04605 | 0 | 14 | 0.103623 | hypothetical protein | |
| HPLT_04610 | 0 | 13 | -0.441320 | flagellar basal body rod modification protein | |
| HPLT_04615 | -1 | 14 | 0.700756 | flagellar hook protein FlgE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_04580 | ACETATEKNASE | 120 | 5e-36 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_04585 | ACETATEKNASE | 84 | 2e-23 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_04605 | IGASERPTASE | 45 | 7e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_04615 | FLGHOOKAP1 | 35 | 7e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 27 | HPLT_05670 | HPLT_05690 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_05670 | 2 | 21 | -3.757790 | chromosome partitioning protein | |
| HPLT_05675 | 2 | 22 | -4.245771 | biotin--protein ligase | |
| HPLT_05680 | 3 | 21 | -3.825304 | methionyl-tRNA formyltransferase | |
| HPLT_05685 | 2 | 22 | -3.887184 | ATPase | |
| HPLT_05690 | 1 | 18 | -0.262221 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05670 | PF07675 | 31 | 0.004 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05680 | FERRIBNDNGPP | 33 | 0.001 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05685 | CHANLCOLICIN | 37 | 2e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_05690 | IGASERPTASE | 43 | 2e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 28 | HPLT_07185 | HPLT_07230 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_07185 | 1 | 13 | 0.675611 | putative inner membrane protein translocase | |
| HPLT_07200 | 0 | 13 | 0.993696 | tRNA modification GTPase TrmE | |
| HPLT_07205 | 3 | 13 | 1.248874 | Outer membrane protein HomD; putative signal | |
| HPLT_07210 | 2 | 16 | 0.137276 | hypothetical protein | |
| HPLT_07215 | 1 | 17 | 0.396433 | hypothetical protein | |
| HPLT_07220 | -1 | 14 | 1.028677 | hypothetical protein | |
| HPLT_07225 | -2 | 13 | 1.847340 | hypothetical protein | |
| HPLT_07230 | -2 | 11 | 1.980415 | Membrane-associated lipoprotein; putative signal |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07185 | 60KDINNERMP | 427 | e-146 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07200 | TCRTETOQM | 33 | 0.002 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07220 | BINARYTOXINB | 30 | 0.009 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_07230 | LIPOLPP20 | 294 | e-105 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. | |||||
| 29 | HPLT_08040 | HPLT_08065 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPLT_08040 | -1 | 12 | 2.180791 | flagellar hook-basal body protein FliE | |
| HPLT_08045 | -1 | 13 | 1.868989 | flagellar basal body rod protein FlgC | |
| HPLT_08050 | -1 | 15 | 1.531809 | flagellar basal body rod protein FlgB | |
| HPLT_08055 | -1 | 16 | 1.489937 | probable cell division protein ftsW | |
| HPLT_08060 | -1 | 15 | 0.520863 | iron(III) ABC transporter, periplasmic | |
| HPLT_08065 | -1 | 13 | -0.025948 | iron complex transport system substrate-binding |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_08040 | FLGHOOKFLIE | 77 | 6e-22 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_08045 | FLGHOOKAP1 | 29 | 0.011 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_08060 | FERRIBNDNGPP | 36 | 2e-04 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPLT_08065 | FERRIBNDNGPP | 33 | 0.002 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||