| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | jhp_0017 | jhp_0023 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0017 | -1 | 14 | 3.370429 | putative chemotaxis protein | |
| jhp_0018 | -1 | 15 | 3.695345 | putative carboxynorspermidine decarboxylase | |
| jhp_0019 | 1 | 15 | 3.268811 | putative | |
| jhp_0020 | 0 | 15 | 2.809085 | putative | |
| jhp_0021 | 2 | 13 | 1.667138 | putative Outer membrane protein | |
| jhp_0022 | 2 | 11 | 0.243803 | CITRATE SYNTHASE | |
| jhp_0023 | 2 | 14 | -0.856025 | ISOCITRATE DEHYDROGENASE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0017 | HTHFIS | 60 | 3e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 2 | jhp_0047 | jhp_0073 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0047 | 2 | 14 | 0.047420 | sodium/proline symporter | |
| jhp_0048 | 4 | 17 | -0.676002 | Proline/pyrroline-5-carboxylate dehydrogenase | |
| jhp_0049 | 6 | 18 | -1.547215 | putative | |
| jhp_0050 | 5 | 19 | -1.390814 | putative | |
| jhp_0051 | 3 | 16 | -0.384403 | putative | |
| jhp_0052 | 3 | 16 | -0.006682 | putative | |
| jhp_0053 | 1 | 14 | -0.292381 | putative | |
| jhp_0054 | 0 | 14 | -0.451301 | putative | |
| jhp_0055 | 2 | 16 | -0.530858 | putative | |
| jhp_0056 | 1 | 14 | -0.329895 | putative | |
| jhp_0057 | 2 | 11 | 0.204640 | putative | |
| jhp_0058 | 1 | 10 | 0.615318 | putative | |
| jhp_0059 | 0 | 13 | 1.092471 | putative | |
| jhp_0060 | -1 | 14 | 1.456666 | putative | |
| jhp_0061 | -1 | 14 | 1.776790 | putative | |
| jhp_0062 | 4 | 21 | 3.671242 | UREASE ACCESSORY PROTEIN | |
| jhp_0063 | 4 | 22 | 3.452732 | UREASE ACCESSORY PROTEIN | |
| jhp_0064 | 4 | 20 | 2.614165 | UREASE ACCESSORY PROTEIN | |
| jhp_0065 | 2 | 18 | 2.743455 | UREASE ACCESSORY PROTEIN | |
| jhp_0066 | 3 | 20 | 2.775342 | urea transporter | |
| jhp_0067 | 1 | 18 | 2.703461 | UREASE BETA SUBUNIT | |
| jhp_0068 | -2 | 13 | 1.871277 | UREASE ALPHA SUBUNIT | |
| jhp_0069 | 1 | 15 | 2.114489 | LIPOPROTEIN SIGNAL PEPTIDASE | |
| jhp_0070 | 1 | 12 | 1.576890 | phosphoglucosamine mutase | |
| jhp_0071 | 2 | 14 | 1.437282 | 30S RIBOSOMAL PROTEIN S20 | |
| jhp_0072 | 2 | 14 | 1.522854 | PEPTIDE CHAIN RELEASE FACTOR 1 | |
| jhp_0073 | 3 | 14 | 1.009301 | putative Outer membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0050 | GPOSANCHOR | 30 | 0.005 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0052 | GPOSANCHOR | 43 | 1e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0067 | UREASE | 1045 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 3 | jhp_0160 | jhp_0191 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0160 | 0 | 20 | -5.074559 | putative | |
| jhp_0161 | 0 | 19 | -3.826788 | putative PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | |
| jhp_0162 | 1 | 20 | -3.668131 | FRUCTOSE-BISPHOSPHATE ALDOLASE | |
| jhp_0163 | 0 | 20 | -4.479187 | ELONGATION FACTOR P (EF-P) | |
| jhp_0164 | -1 | 20 | -4.801801 | putative restriction enzyme | |
| jhp_0165 | -1 | 14 | -2.589154 | putative | |
| jhp_0166 | 0 | 12 | 0.106304 | sialic acid synthase | |
| jhp_0167 | -1 | 10 | -0.010963 | abc transporter, ATP-binding protein | |
| jhp_0168 | -1 | 9 | -0.450955 | APOLIPOPROTEIN N-ACYLTRANSFERASE | |
| jhp_0169 | 2 | 11 | 0.192008 | putative | |
| jhp_0170 | 1 | 11 | 0.396393 | LYSYL-TRNA SYNTHETASE | |
| jhp_0171 | 1 | 12 | -0.032230 | SERINE HYDROXYMETHYLTRANSFERASE | |
| jhp_0172 | 1 | 13 | 0.285463 | putative | |
| jhp_0173 | 0 | 12 | 2.143469 | putative | |
| jhp_0174 | 0 | 13 | 2.432711 | putative | |
| jhp_0175 | -1 | 10 | 2.181646 | putative | |
| jhp_0176 | -1 | 9 | 2.275340 | putative cardiolipin synthase | |
| jhp_0177 | 0 | 11 | 3.147792 | Fumarate reductase | |
| jhp_0178 | 0 | 12 | 3.211080 | Fumarate reductase | |
| jhp_0179 | -1 | 15 | 1.722662 | Fumarate reductase | |
| jhp_0180 | -1 | 17 | 1.657419 | TRIOSE PHOPHATE ISOMERASE | |
| jhp_0181 | -2 | 18 | 2.702309 | ENOYL-ACYL CARRIER PROTEIN REDUCTASE | |
| jhp_0182 | -2 | 19 | 2.755820 | UDP-3-O-[3-hydroxymyristoyl | |
| jhp_0183 | -2 | 18 | 3.205449 | S-adenosylmethionine synthetase | |
| jhp_0184 | -2 | 17 | 2.389191 | NUCLEOSIDE DIPHOSPHATE KINASE | |
| jhp_0185 | -2 | 16 | 1.631089 | putative | |
| jhp_0186 | -1 | 13 | -3.284594 | 50S RIBOSOMAL PROTEIN L32 | |
| jhp_0187 | -1 | 13 | -3.576024 | putative FATTY ACID/PHOSPHOLIPID SYNTHESIS | |
| jhp_0188 | 0 | 13 | -3.189829 | BETA-KETOACYL-ACP SYNTHASE III | |
| jhp_0189 | 1 | 13 | -4.377179 | putative | |
| jhp_0190 | 1 | 11 | -3.738006 | putative | |
| jhp_0191 | -1 | 10 | -3.419435 | putative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0173 | TONBPROTEIN | 30 | 0.010 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0181 | DHBDHDRGNASE | 62 | 2e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 4 | jhp_0281 | jhp_0310 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0281 | 0 | 14 | 3.064898 | 50S RIBOSOMAL PROTEIN L21 | |
| jhp_0282 | 0 | 13 | 3.417926 | 50S RIBOSOMAL PROTEIN L27 | |
| jhp_0283 | 0 | 12 | 3.264550 | PERIPLASMIC DIPEPTIDE TRANSPORT | |
| jhp_0284 | -1 | 14 | 3.336116 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN | |
| jhp_0286 | -2 | 13 | 3.005126 | DIPEPTIDE TRANSPORT SYSTEM DIPEPTIDE TRANSPORT | |
| jhp_0287 | -2 | 14 | 2.706161 | DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN | |
| jhp_0288 | -2 | 13 | 2.213623 | putative | |
| jhp_0289 | -1 | 13 | 1.497353 | putative | |
| jhp_0290 | 0 | 16 | 2.083453 | putative | |
| jhp_0291 | 1 | 17 | 2.644963 | GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE | |
| jhp_0292 | 3 | 17 | 2.040949 | putative | |
| jhp_0293 | 3 | 16 | 1.811968 | putative | |
| jhp_0294 | 2 | 16 | 0.384715 | putative | |
| jhp_0295 | 1 | 15 | -0.741055 | putative | |
| jhp_0296 | 1 | 15 | -1.841287 | putative | |
| jhp_0297 | 0 | 16 | -1.966227 | putative | |
| jhp_0298 | -2 | 19 | -2.608757 | putative | |
| jhp_0299 | 0 | 19 | -3.187463 | putative | |
| jhp_0300 | 1 | 17 | -1.873336 | putative abc transporter, ATP-binding protein | |
| jhp_0301 | 2 | 14 | -1.240923 | putative | |
| jhp_0302 | 1 | 13 | -1.393385 | ARGINYL-TRNA SYNTHETASE | |
| jhp_0303 | 3 | 13 | -1.067658 | putative | |
| jhp_0304 | 3 | 12 | -1.918060 | GUANYLATE KINASE | |
| jhp_0305 | 3 | 13 | -2.154711 | putative | |
| jhp_0306 | 1 | 15 | -2.226999 | putative ENDONUCLEASE | |
| jhp_0307 | 2 | 13 | -1.389255 | putative Outer membrane protein | |
| jhp_0308 | 2 | 12 | -0.773530 | FLAGELLAR L-RING PROTEIN PRECURSOR (BASAL BODY | |
| jhp_0310 | 2 | 11 | -1.173118 | putative FLAGELLAR BIOSYNTHESIS PROTEIN |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0298 | TCRTETB | 31 | 0.005 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0304 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0305 | IGASERPTASE | 63 | 2e-12 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0308 | FLGLRINGFLGH | 195 | 1e-64 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| 5 | jhp_0425 | jhp_0446 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0425 | 0 | 14 | -3.094879 | Molybdate ABC transporter, periplasmic-binding | |
| jhp_0426 | 0 | 12 | -3.523958 | Molybdate ABC transporter, permease | |
| jhp_0427 | -1 | 11 | -2.078743 | Molybdate ABC transporter, ATP-binding protein | |
| jhp_0428 | -1 | 11 | -2.427327 | GLUTAMYL-TRNA SYNTHETASE | |
| jhp_0429 | -1 | 14 | -3.027964 | putative Outer membrane protein | |
| jhp_0430 | -1 | 13 | -2.864384 | TYPE II DNA MODIFICATION ENZYME | |
| jhp_0431 | -2 | 13 | -2.057655 | putative | |
| jhp_0432 | -2 | 13 | -0.893767 | putative | |
| jhp_0433 | 3 | 15 | -0.463669 | putative TYPE II DNA MODIFICATION ENZYME | |
| jhp_0434 | 4 | 15 | 0.334216 | putative | |
| jhp_0435 | 1 | 14 | -0.192910 | TYPE II DNA MODIFICATION ENZYME | |
| jhp_0436 | 2 | 16 | -0.134715 | putative | |
| jhp_0437 | 2 | 15 | 0.266964 | putative | |
| jhp_0438 | 3 | 17 | 0.381305 | Outer membrane protein | |
| jhp_0439 | 2 | 15 | -1.276633 | putative Outer membrane protein | |
| jhp_0440 | 2 | 15 | -1.233935 | putative | |
| jhp_0441 | -2 | 11 | -1.284686 | putative | |
| jhp_0442 | 0 | 10 | -1.304356 | PUTATIVE POTASSIUM CHANNEL PROTEIN | |
| jhp_0443 | 0 | 13 | -1.733412 | 50S RIBOSOMAL PROTEIN L28 | |
| jhp_0444 | 0 | 11 | -1.948685 | putative paralog of HpaA | |
| jhp_0445 | 1 | 12 | -1.580337 | PHOSPHO-N-ACETYLMURAMOYL-PENTAPEPTIDE- | |
| jhp_0446 | 2 | 12 | -1.673999 | UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0427 | PF05272 | 30 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0432 | TCRTETOQM | 198 | 2e-57 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0444 | PF05211 | 278 | 3e-96 | Neuraminyllactose-binding hemagglutinin | |
>PF05211#Neuraminyllactose-binding hemagglutinin | |||||
| 6 | jhp_0462 | jhp_0493 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0462 | 0 | 11 | -3.149706 | putative | |
| jhp_0463 | -1 | 11 | -1.467279 | 50S RIBOSOMAL PROTEIN L9 | |
| jhp_0464 | -2 | 12 | -1.664213 | HEAT SHOCK PROTEIN | |
| jhp_0465 | -1 | 14 | -3.014428 | HEAT SHOCK PROTEIN | |
| jhp_0466 | 2 | 16 | -3.226782 | GTP-binding protein | |
| jhp_0467 | 3 | 16 | -3.284215 | putative | |
| jhp_0468 | 5 | 18 | -2.594792 | putative | |
| jhp_0469 | 8 | 19 | -2.604538 | putative cag island protein | |
| jhp_0470 | 8 | 19 | -2.929697 | cag island protein | |
| jhp_0471 | 9 | 16 | -2.136530 | cag island protein | |
| jhp_0472 | 9 | 16 | -2.412942 | cag island protein | |
| jhp_0473 | 8 | 18 | -2.562348 | cag island protein, DNA transfer protein | |
| jhp_0474 | 9 | 20 | -3.048018 | cag island protein, DNA transfer protein | |
| jhp_0475 | 9 | 20 | -3.190392 | cag island protein | |
| jhp_0476 | 10 | 20 | -2.962893 | cag island protein | |
| jhp_0477 | 10 | 27 | -4.200603 | cag island protein | |
| jhp_0478 | 10 | 29 | -4.280118 | cag island protein | |
| jhp_0479 | 12 | 29 | -5.007658 | cag island protein | |
| jhp_0480 | 11 | 27 | -5.129236 | cag island protein | |
| jhp_0481 | 12 | 24 | -5.148258 | cag island protein | |
| jhp_0482 | 10 | 24 | -5.641080 | cag island protein | |
| jhp_0483 | 6 | 21 | -4.305815 | cag island protein | |
| jhp_0484 | 7 | 19 | -3.068791 | cag island protein | |
| jhp_0485 | 6 | 18 | -2.756007 | cag island protein | |
| jhp_0486 | 7 | 20 | -2.943991 | cag island protein | |
| jhp_0487 | 6 | 19 | -2.994802 | cag island protein | |
| jhp_0488 | 6 | 20 | -3.304242 | cag island protein | |
| jhp_0489 | 7 | 20 | -3.414846 | cag island protein | |
| jhp_0490 | 7 | 21 | -3.604451 | cag island protein | |
| jhp_0491 | 6 | 19 | -3.138676 | cag island protein | |
| jhp_0492 | 4 | 16 | -1.935422 | DNA transfer protein (Agrobacterium VirB4 | |
| jhp_0493 | 3 | 16 | -1.088043 | cag island protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0466 | PF03944 | 31 | 0.006 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0476 | IGASERPTASE | 39 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0477 | TYPE4SSCAGX | 881 | 0.0 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0479 | PF04335 | 119 | 4e-35 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0486 | TYPE4SSCAGX | 31 | 0.008 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0492 | ACRIFLAVINRP | 33 | 0.008 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 7 | jhp_0621 | jhp_0633 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0621 | 2 | 12 | 0.556169 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 ALPHA | |
| jhp_0622 | 3 | 12 | 0.194984 | putative | |
| jhp_0623 | 2 | 10 | -0.031672 | putative | |
| jhp_0624 | 1 | 12 | -1.274333 | UDP-N-ACETYLGLUCOSAMINE PYROPHOSPHORYLASE | |
| jhp_0625 | 2 | 13 | -3.100928 | FLAGELLAR BIOSYNTHESIS PROTEIN | |
| jhp_0626 | 3 | 14 | -2.950226 | IRON(III) DICITRATE TRANSPORT PROTEIN | |
| jhp_0627 | 2 | 13 | -1.835839 | FERROUS IRON TRANSPORT PROTEIN B | |
| jhp_0628 | 3 | 16 | -0.180515 | putative | |
| jhp_0629 | 4 | 17 | 0.198973 | putative TYPE II DNA MODIFICATION ENZYME | |
| jhp_0630 | 3 | 16 | 1.748344 | putative TYPE II RESTRICTION ENZYME | |
| jhp_0631 | 3 | 15 | 3.659555 | putative | |
| jhp_0632 | 3 | 14 | 3.717889 | putative HYDANTOIN UTILIZATION | |
| jhp_0633 | 1 | 13 | 4.165950 | putative HYDANTOIN UTILIZATION |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0625 | FLGBIOSNFLIP | 275 | 5e-96 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| 8 | jhp_0823 | jhp_0834 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0823 | 2 | 18 | -2.095648 | putative | |
| jhp_0824 | 3 | 21 | -4.019833 | putative | |
| jhp_0825 | 5 | 22 | -5.665488 | putative | |
| jhp_0826 | 5 | 20 | -5.446126 | IS606 TRANSPOSASE | |
| jhp_0827 | 5 | 24 | -5.541822 | IS606 TRANSPOSASE | |
| jhp_0828 | 0 | 19 | 1.102236 | putative | |
| jhp_0829 | 2 | 22 | 2.886740 | putative | |
| jhp_0830 | 1 | 19 | 3.732116 | putative | |
| jhp_0831 | 0 | 19 | 4.051301 | putative | |
| jhp_0832 | 0 | 19 | 4.102530 | putative | |
| jhp_0833 | 1 | 19 | 4.390311 | outer membrane protein - adhesin | |
| jhp_0834 | 0 | 18 | 3.296671 | putative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0823 | DHBDHDRGNASE | 87 | 3e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0829 | PF04605 | 41 | 9e-09 | Virulence-associated protein D (VapD) | |
>PF04605#Virulence-associated protein D (VapD) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0830 | PF01206 | 27 | 0.006 | SirA family protein | |
>PF01206#SirA family protein | |||||
| 9 | jhp_0912 | jhp_0956 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0912 | 3 | 14 | -1.193378 | septum formation protein | |
| jhp_0913 | 2 | 16 | -2.543131 | GTPase in circumferential ring formation | |
| jhp_0914 | 2 | 19 | -5.176964 | putative | |
| jhp_0915 | 3 | 22 | -6.411744 | putative | |
| jhp_0916 | 6 | 25 | -7.462384 | putative | |
| jhp_0917 | 6 | 24 | -7.403055 | DNA transfer protein | |
| jhp_0918 | 5 | 20 | -6.136821 | DNA transfer protein | |
| jhp_0919 | 5 | 21 | -6.506868 | topoisomerase I | |
| jhp_0920 | 6 | 20 | -6.471754 | putative | |
| jhp_0921 | 6 | 18 | -5.905546 | putative | |
| jhp_0922 | 6 | 18 | -6.512349 | putative | |
| jhp_0923 | 4 | 14 | -4.061610 | putative | |
| jhp_0924 | 5 | 15 | -4.115118 | putative | |
| jhp_0925 | 4 | 15 | -3.962699 | putative | |
| jhp_0926 | 5 | 16 | -4.185158 | putative | |
| jhp_0927 | 5 | 17 | -4.052499 | putative | |
| jhp_0928 | 6 | 18 | -3.614837 | putative | |
| jhp_0929 | 10 | 29 | -6.648898 | putative | |
| jhp_0930 | 11 | 31 | -6.647512 | putative | |
| jhp_0931 | 11 | 31 | -6.643346 | topoisomerase I | |
| jhp_0932 | 9 | 30 | -6.224745 | putative | |
| jhp_0933 | 7 | 29 | -6.403609 | putative | |
| jhp_0934 | 7 | 29 | -6.854014 | putative | |
| jhp_0935 | 8 | 31 | -6.444408 | putative | |
| jhp_0936 | 8 | 30 | -6.801548 | putative | |
| jhp_0937 | 8 | 27 | -6.675837 | putative | |
| jhp_0938 | 9 | 26 | -7.281906 | putative | |
| jhp_0939 | 9 | 26 | -7.757807 | putative | |
| jhp_0940 | 7 | 22 | -5.436130 | putative | |
| jhp_0941 | 7 | 22 | -4.920943 | INTEGRASE/RECOMBINASE (XERCD FAMILY) | |
| jhp_0942 | 5 | 21 | -3.935832 | putative | |
| jhp_0943 | 3 | 23 | -3.006028 | putative | |
| jhp_0944 | 5 | 23 | -2.849774 | putative | |
| jhp_0945 | 5 | 21 | -2.748905 | putative | |
| jhp_0946 | 5 | 19 | -4.915703 | putative | |
| jhp_0947 | 5 | 21 | -5.384355 | putative | |
| jhp_0948 | 4 | 26 | -6.919466 | putative | |
| jhp_0949 | 4 | 25 | -5.976785 | putative | |
| jhp_0950 | 1 | 20 | -6.080425 | putative | |
| jhp_0951 | 0 | 20 | -4.909565 | INTEGRASE/RECOMBINASE (XERCD FAMILY) | |
| jhp_0952 | -1 | 19 | -3.071067 | putative | |
| jhp_0953 | -1 | 18 | -2.242236 | putative | |
| jhp_0954 | 2 | 15 | -1.197683 | putative | |
| jhp_0955 | 2 | 17 | -1.740893 | putative | |
| jhp_0956 | 4 | 20 | -1.758278 | putative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0912 | SHAPEPROTEIN | 40 | 1e-05 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0921 | PF04335 | 99 | 1e-26 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0927 | FbpA_PF05833 | 29 | 0.035 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0928 | IGASERPTASE | 38 | 5e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0929 | PF05272 | 27 | 0.035 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0945 | VACCYTOTOXIN | 43 | 5e-06 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| 10 | jhp_1029 | jhp_1040 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1029 | 3 | 11 | -0.458091 | GLUCOKINASE | |
| jhp_1030 | 3 | 12 | -1.506006 | ZINC-DEPENDENT ALCOHOL DEHYDROGENASE | |
| jhp_1031 | 2 | 13 | -1.743176 | putative lipopolysaccharide biosynthesis | |
| jhp_1032 | 1 | 12 | 0.725452 | putative lipopolysaccharide biosynthesis | |
| jhp_1033 | 2 | 12 | 2.558665 | putative | |
| jhp_1034 | 0 | 14 | 3.040770 | putative Outer membrane protein | |
| jhp_1035 | 0 | 12 | 2.445430 | Pyruvate ferrodoxin oxidoreductase | |
| jhp_1036 | -1 | 12 | 2.196706 | Pyruvate ferrodoxin oxidoreductase | |
| jhp_1037 | 0 | 11 | 1.577176 | Pyruvate ferrodoxin oxidoreductase | |
| jhp_1038 | -1 | 12 | 0.020353 | Pyruvate ferrodoxin oxidoreductase | |
| jhp_1039 | 3 | 14 | -1.459900 | ADENYLOSUCCINATE LYASE | |
| jhp_1040 | 3 | 18 | -2.113134 | putative Outer membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1035 | YERSSTKINASE | 29 | 0.011 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 11 | jhp_1049 | jhp_1056 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1049 | 2 | 17 | -2.362602 | putative | |
| jhp_1050 | 1 | 15 | -0.903498 | TYPE II DNA MODIFICATION ENZYME | |
| jhp_1051 | 4 | 14 | -1.182981 | putative | |
| jhp_1052 | 4 | 13 | -1.439823 | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | |
| jhp_1053 | 4 | 14 | -2.112102 | putative | |
| jhp_1054 | 4 | 14 | -1.836897 | putative Outer membrane protein | |
| jhp_1055 | 1 | 14 | 0.159445 | putative TONB-INDEPENDENT PROTEIN-UPTAKE | |
| jhp_1056 | 2 | 17 | 0.191285 | putative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1054 | OMPADOMAIN | 145 | 6e-45 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1056 | TYPE4SSCAGA | 33 | 0.002 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 12 | jhp_1065 | jhp_1071 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1065 | 0 | 18 | -4.398004 | ATP synthase B' | |
| jhp_1066 | 2 | 19 | -3.778477 | putative | |
| jhp_1067 | 2 | 20 | -4.145187 | putative | |
| jhp_1068 | 2 | 19 | -4.089989 | putative BIOTIN ACTIVATION PROTEIN | |
| jhp_1069 | 1 | 19 | -3.857124 | METHIONYL-TRNA FORMYLTRANSFERASE | |
| jhp_1070 | 1 | 19 | -4.113399 | putative | |
| jhp_1071 | 2 | 17 | -0.021661 | putative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1069 | FERRIBNDNGPP | 31 | 0.005 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1070 | GPOSANCHOR | 33 | 0.006 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1071 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 13 | jhp_1116 | jhp_1124 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1116 | 1 | 11 | 3.645960 | ADP-HEPTOSE--LPS HEPTOSYLTRANSFERASE II | |
| jhp_1117 | 2 | 13 | 3.930648 | putative motility protein | |
| jhp_1118 | 2 | 13 | 3.877443 | ELONGATION FACTOR G (EF-G) | |
| jhp_1119 | 1 | 12 | 3.621705 | 30S RIBOSOMAL PROTEIN S7 | |
| jhp_1120 | 1 | 12 | 3.588149 | 30S RIBOSOMAL PROTEIN S12 | |
| jhp_1121 | 1 | 12 | 3.485596 | DNA-DIRECTED RNA POLYMERASE, BETA SUBUNIT | |
| jhp_1122 | 1 | 21 | 1.633693 | 50S RIBOSOMAL PROTEIN L7/L12 | |
| jhp_1123 | 3 | 20 | 2.389323 | 50S RIBOSOMAL PROTEIN L10 | |
| jhp_1124 | 2 | 18 | 1.269707 | 50S RIBOSOMAL PROTEIN L1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1118 | TCRTETOQM | 640 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 14 | jhp_1165 | jhp_1189 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1165 | 2 | 11 | -0.800491 | 30S RIBOSOMAL PROTEIN S18 | |
| jhp_1166 | 2 | 11 | -1.063604 | SINGLE-STRAND BINDING PROTEIN | |
| jhp_1167 | 2 | 11 | -1.226210 | 30S RIBOSOMAL PROTEIN S6 | |
| jhp_1168 | 3 | 10 | -0.931453 | putative | |
| jhp_1169 | 2 | 9 | -0.274658 | RIBONUCLEASE II FAMILY PROTEIN | |
| jhp_1170 | 0 | 11 | -0.102556 | SHIKIMATE 5-DEHYDROGENASE | |
| jhp_1171 | 0 | 12 | 0.279358 | putative | |
| jhp_1172 | 0 | 12 | 0.489308 | putative Peptide ABC transporter, ATP-binding | |
| jhp_1173 | 0 | 12 | 0.757537 | putative | |
| jhp_1174 | 1 | 13 | 0.640230 | TRYPTOPHANYL-TRNA SYNTHETASE | |
| jhp_1175 | 2 | 12 | 0.965086 | putative | |
| jhp_1176 | 3 | 14 | 1.455526 | PROTEIN-EXPORT MEMBRANE PROTEIN | |
| jhp_1177 | 1 | 12 | 1.997257 | RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING | |
| jhp_1178 | 0 | 12 | 2.183902 | OROTATE PHOSPHORIBOSYLTRANSFERASE | |
| jhp_1179 | 0 | 14 | 2.782267 | putative | |
| jhp_1180 | 0 | 14 | 3.154667 | putative | |
| jhp_1181 | -1 | 13 | 1.569813 | NADH oxidoreductase I | |
| jhp_1182 | -2 | 11 | 1.891081 | NADH oxidoreductase I | |
| jhp_1183 | -2 | 11 | 1.800452 | NADH oxidoreductase I | |
| jhp_1184 | -2 | 12 | 2.331195 | NADH oxidoreductase I | |
| jhp_1185 | -1 | 12 | 1.872489 | putative NADH oxidoreductase I | |
| jhp_1186 | -1 | 12 | 1.887743 | putative NADH oxidoreductase I | |
| jhp_1187 | -1 | 11 | 3.061842 | NADH oxidoreductase I | |
| jhp_1188 | 0 | 13 | 3.204203 | NADH oxidoreductase I | |
| jhp_1189 | 0 | 13 | 3.050492 | NADH oxidoreductase I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1171 | IGASERPTASE | 39 | 2e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1176 | SECGEXPORT | 49 | 3e-10 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1187 | TYPE4SSCAGX | 32 | 0.010 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| 15 | jhp_1206 | jhp_1235 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1206 | 2 | 20 | 0.386015 | putative | |
| jhp_1207 | 1 | 19 | 1.147217 | putative TRANSCRIPTIONAL REGULATOR | |
| jhp_1208 | 0 | 19 | 1.335529 | putative | |
| jhp_1209 | -2 | 15 | 0.949473 | putative | |
| jhp_1210 | -2 | 14 | 1.621219 | NICOTINAMIDE MONONUCLEOTIDE TRANSPORTER | |
| jhp_1211 | -2 | 15 | 2.317199 | putative | |
| jhp_1212 | 1 | 17 | 2.820438 | 50S RIBOSOMAL PROTEIN L17 | |
| jhp_1213 | 2 | 18 | 2.435362 | RNA POLYMERASE ALPHA SUBUNIT | |
| jhp_1214 | 3 | 20 | 3.869617 | 30S RIBOSOMAL PROTEIN S4 | |
| jhp_1215 | 2 | 18 | 3.568231 | 30S RIBOSOMAL PROTEIN S11 | |
| jhp_1216 | 1 | 16 | 2.844303 | 30S RIBOSOMAL PROTEIN S13 | |
| jhp_1217 | 1 | 16 | 3.175778 | 50S RIBOSOMAL PROTEIN L36 | |
| jhp_1218 | 0 | 16 | 3.242688 | TRANSLATION INITIATION FACTOR IF-1 | |
| jhp_1219 | -1 | 14 | 3.343046 | METHIONINE AMINOPEPTIDASE | |
| jhp_1220 | -1 | 16 | 2.326971 | PREPROTEIN TRANSLOCASE SUBUNIT | |
| jhp_1221 | -1 | 16 | 2.148227 | 50S RIBOSOMAL PROTEIN L15 | |
| jhp_1222 | -2 | 16 | 2.045415 | 30S RIBOSOMAL PROTEIN S5 | |
| jhp_1223 | -1 | 17 | 1.451669 | 50S RIBOSOMAL PROTEIN L18 | |
| jhp_1224 | 1 | 19 | 1.763612 | 50S RIBOSOMAL PROTEIN L6 | |
| jhp_1225 | 2 | 19 | 0.703006 | putative 30S RIBOSOMAL PROTEIN S8 | |
| jhp_1226 | 2 | 17 | 0.769214 | 30S RIBOSOMAL PROTEIN S14 | |
| jhp_1227 | 2 | 18 | 0.689538 | 50S RIBOSOMAL PROTEIN L5 | |
| jhp_1228 | 0 | 20 | 1.855187 | 50S RIBOSOMAL PROTEIN L24 | |
| jhp_1229 | 1 | 20 | 2.267687 | 50S RIBOSOMAL PROTEIN L14 | |
| jhp_1230 | 0 | 21 | 1.585359 | 30S RIBOSOMAL PROTEIN S17 | |
| jhp_1231 | 0 | 20 | 3.629283 | 50S RIBOSOMAL PROTEIN L29 | |
| jhp_1232 | -1 | 20 | 3.723888 | 50S RIBOSOMAL PROTEIN L16 | |
| jhp_1233 | 1 | 19 | 3.824889 | 30S RIBOSOMAL PROTEIN S3 | |
| jhp_1234 | 2 | 21 | 4.139783 | 50S RIBOSOMAL PROTEIN L22 | |
| jhp_1235 | 2 | 22 | 4.234641 | 30S RIBOSOMAL PROTEIN S19 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1208 | PF07132 | 30 | 0.001 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1213 | BACINVASINC | 32 | 0.004 | Salmonella/Shigella invasin protein C signature. | |
>BACINVASINC#Salmonella/Shigella invasin protein C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1220 | SECYTRNLCASE | 386 | e-134 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| 16 | jhp_1295 | jhp_1305 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1295 | -1 | 14 | -3.760120 | putative ENDONUCLEASE | |
| jhp_1296 | -1 | 15 | -3.858269 | putative TYPE III DNA MODIFICATION ENZYME | |
| jhp_1297 | -1 | 15 | -3.272126 | putative TYPE III RESTRICTION ENZYME | |
| jhp_1298 | -1 | 16 | -3.024465 | BIOTIN SYNTHETASE | |
| jhp_1299 | 0 | 17 | -4.269527 | putative ribonuclease N | |
| jhp_1300 | 0 | 18 | -4.522762 | putative | |
| jhp_1301 | 1 | 16 | -3.679674 | putative | |
| jhp_1302 | 3 | 15 | -3.167895 | putative | |
| jhp_1303 | 2 | 15 | -2.850224 | putative | |
| jhp_1304 | 4 | 16 | -2.215367 | putative | |
| jhp_1305 | 4 | 18 | -1.622288 | putative |
| 17 | jhp_1359 | jhp_1370 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1359 | 2 | 10 | 0.629214 | putative | |
| jhp_1360 | 1 | 9 | 0.177724 | putative Outer membrane protein | |
| jhp_1361 | 2 | 10 | 0.311455 | BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE | |
| jhp_1362 | 1 | 12 | -0.468588 | putative Outer membrane protein | |
| jhp_1363 | 1 | 12 | -0.512715 | DNA POLYMERASE I | |
| jhp_1364 | 0 | 16 | 0.295183 | putative TYPE II RESTRICTION ENZYME | |
| jhp_1365 | 1 | 19 | 0.555585 | putative TYPE II DNA MODIFICATION ENZYME | |
| jhp_1366 | 3 | 15 | 1.380411 | putative | |
| jhp_1367 | 3 | 13 | 0.517813 | THYMIDYLATE KINASE | |
| jhp_1368 | 2 | 12 | 0.669134 | LIPOPOLYSACCHARIDE CORE BIOSYNTHESIS PROTEIN | |
| jhp_1369 | 2 | 12 | 0.803668 | OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE | |
| jhp_1370 | 3 | 11 | 0.303951 | putative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1367 | BLACTAMASEA | 28 | 0.028 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1368 | LPSBIOSNTHSS | 223 | 6e-78 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 18 | jhp_1400 | jhp_1410 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1400 | 2 | 14 | 2.773366 | putative | |
| jhp_1401 | 1 | 13 | 2.153878 | putative ferredoxin-like protein | |
| jhp_1402 | -1 | 12 | 2.130042 | putative | |
| jhp_1403 | -1 | 11 | 1.080294 | DIHYDRONEOPTERIN ALDOLASE | |
| jhp_1404 | -2 | 11 | -0.398398 | putative | |
| jhp_1405 | -2 | 8 | -1.243512 | putative IRON-REGULATED OUTER MEMBRANE PROTEIN | |
| jhp_1406 | -1 | 8 | -3.480067 | L-SERYL-TRNA(SER) SELENIUM TRANSFERASE | |
| jhp_1407 | 0 | 8 | -3.493006 | N-UTILIZATION SUBSTANCE PROTEIN A | |
| jhp_1408 | 0 | 8 | -3.981316 | putative | |
| jhp_1409 | 0 | 9 | -3.542594 | putative TYPE II DNA MODIFICATION ENZYME | |
| jhp_1410 | 1 | 11 | -3.495288 | TYPE III RESTRICTION ENZYME |
| 19 | jhp_0034 | jhp_0039 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0034 | -2 | 12 | 0.370788 | DNA transformation competancy | |
| jhp_0035 | -2 | 12 | 0.587186 | DNA transformation compentancy | |
| jhp_0036 | -2 | 12 | 1.548313 | DNA transformation compentancy | |
| jhp_0037 | -1 | 12 | 1.280240 | phosphomannose isomerase/GDP-mannose | |
| jhp_0038 | -1 | 12 | 1.586004 | GDP-D-mannose dehydratase | |
| jhp_0039 | -1 | 12 | 1.182216 | putative SUGAR NUCLEOTIDE BIOSYNTHESIS |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0034 | PF04335 | 133 | 1e-40 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0035 | TYPE4SSCAGX | 32 | 0.004 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0038 | NUCEPIMERASE | 88 | 2e-21 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0039 | NUCEPIMERASE | 51 | 2e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 20 | jhp_0107 | jhp_0111 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0107 | -1 | 9 | 0.989445 | flagellin B | |
| jhp_0108 | -1 | 8 | 0.087841 | DNA TOPOISOMERASE I | |
| jhp_0109 | -1 | 10 | 0.010690 | putative | |
| jhp_0110 | 0 | 10 | 0.183686 | putative | |
| jhp_0111 | -1 | 12 | 1.601974 | PHOSPHOENOLPYRUVATE SYNTHASE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0107 | FLAGELLIN | 286 | 7e-93 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0108 | FbpA_PF05833 | 30 | 0.033 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0110 | IGASERPTASE | 32 | 0.008 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0111 | PHPHTRNFRASE | 293 | 9e-92 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 21 | jhp_0228 | jhp_0235 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0228 | -2 | 15 | 1.039963 | NEUTROPHIL-ACTIVATING PROTEIN A | |
| jhp_0229 | -2 | 14 | 0.986548 | putative histidine kinase sensor protein | |
| jhp_0230 | -2 | 12 | 1.892714 | putative | |
| jhp_0231 | -2 | 12 | 2.472355 | FLAGELLAR P-RING PROTEIN | |
| jhp_0232 | -2 | 10 | 2.329477 | ATP-DEPENDENT RNA HELICASE DEAD | |
| jhp_0233 | -2 | 9 | 2.050724 | putative | |
| jhp_0234 | -2 | 9 | 1.888612 | putative | |
| jhp_0235 | -2 | 9 | 1.809457 | ABC transporter, ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0228 | HELNAPAPROT | 149 | 4e-49 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0229 | PF06580 | 30 | 0.015 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0231 | FLGPRINGFLGI | 359 | e-126 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0232 | SECA | 29 | 0.050 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0235 | HTHFIS | 30 | 0.025 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 22 | jhp_0329 | jhp_0335 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0329 | -1 | 10 | 0.431800 | GTP-BINDING PROTEIN | |
| jhp_0330 | 1 | 13 | -0.010150 | putative | |
| jhp_0331 | -1 | 13 | -0.811183 | putative | |
| jhp_0332 | 0 | 12 | 0.149215 | putative | |
| jhp_0333 | 0 | 12 | -0.025943 | FLAGELLAR BASAL-BODY ROD PROTEIN | |
| jhp_0334 | 1 | 11 | -0.588142 | ALPHA-KETOGLUTARATE PERMEASE | |
| jhp_0335 | 0 | 13 | -0.846728 | septum formation protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0329 | TCRTETOQM | 114 | 1e-28 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0333 | FLGHOOKAP1 | 30 | 0.010 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0334 | TCRTETB | 40 | 1e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0335 | IGASERPTASE | 34 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 23 | jhp_0546 | jhp_0559 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0546 | -2 | 10 | -1.729142 | methyl-accepting chemotaxis protein (MCP) | |
| jhp_0547 | -1 | 10 | -1.578254 | putative secretion/efflux abc transporter, | |
| jhp_0548 | -2 | 11 | 0.820927 | FLAGELLIN A | |
| jhp_0549 | -3 | 12 | 0.822912 | ENDONUCLEASE III | |
| jhp_0550 | -2 | 12 | 1.245721 | putative | |
| jhp_0551 | 1 | 11 | 0.509115 | UROPORPHYRINOGEN DECARBOXYLASE | |
| jhp_0552 | 1 | 11 | 0.449497 | putative | |
| jhp_0553 | 0 | 9 | 0.512919 | putative efflux transporter | |
| jhp_0554 | 0 | 9 | 0.465698 | putative efflux transporter | |
| jhp_0555 | 0 | 10 | 0.061280 | putative | |
| jhp_0556 | 0 | 10 | 0.071858 | putative vacuolating cytotoxin (VacA) paralog | |
| jhp_0557 | -1 | 10 | -0.396882 | putative | |
| jhp_0558 | -2 | 11 | -1.047952 | DNA LIGASE | |
| jhp_0559 | -1 | 13 | -1.391199 | putative chemotaxis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0546 | OMS28PORIN | 30 | 0.015 | OMS28 porin signature. | |
>OMS28PORIN#OMS28 porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0548 | FLAGELLIN | 244 | 6e-77 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0549 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0552 | RTXTOXIND | 30 | 0.028 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0553 | RTXTOXIND | 51 | 1e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0554 | ACRIFLAVINRP | 895 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0556 | VACCYTOTOXIN | 273 | 5e-76 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0557 | LCRVANTIGEN | 31 | 8e-04 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0559 | HTHFIS | 54 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 24 | jhp_0902 | jhp_0909 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_0902 | -2 | 10 | -0.219447 | putative | |
| jhp_0903 | -3 | 10 | 0.346277 | putative cation efflux system protein | |
| jhp_0904 | -2 | 10 | -0.279641 | putative cation efflux system protein | |
| jhp_0905 | 0 | 10 | -0.201641 | putative | |
| jhp_0906 | -1 | 12 | -0.507941 | GLYCYL-TRNA SYNTHETASE BETA CHAIN | |
| jhp_0907 | -2 | 12 | 0.586190 | putative | |
| jhp_0908 | -2 | 13 | 1.325015 | 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT | |
| jhp_0909 | -1 | 11 | 0.416738 | GLU-TRNA AMIDOTRANSFERASE, SUBUNIT C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0902 | LPSBIOSNTHSS | 25 | 0.042 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0903 | ACRIFLAVINRP | 760 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0907 | IGASERPTASE | 29 | 0.043 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_0909 | TYPE3IMSPROT | 26 | 0.029 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 25 | jhp_1107 | jhp_1118 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1107 | 0 | 14 | 1.175466 | putative transporter | |
| jhp_1108 | 0 | 12 | -0.050714 | putative | |
| jhp_1109 | 0 | 10 | 0.066847 | putative NA+/H+ ANTIPORTER | |
| jhp_1110 | -1 | 13 | 0.041243 | putative | |
| jhp_1111 | -1 | 14 | 0.223254 | putative | |
| jhp_1112 | -1 | 16 | -0.603657 | CARBONIC ANHYDRASE | |
| jhp_1113 | -2 | 11 | 0.780630 | putative | |
| jhp_1114 | -2 | 10 | 2.089770 | aspartate-semialdehyde dehydrogenase | |
| jhp_1115 | -2 | 13 | 2.031842 | HISTIDYL-TRNA SYNTHETASE | |
| jhp_1116 | 1 | 11 | 3.645960 | ADP-HEPTOSE--LPS HEPTOSYLTRANSFERASE II | |
| jhp_1117 | 2 | 13 | 3.930648 | putative motility protein | |
| jhp_1118 | 2 | 13 | 3.877443 | ELONGATION FACTOR G (EF-G) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1107 | TCRTETA | 100 | 3e-25 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1111 | TCRTETB | 51 | 5e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1113 | IGASERPTASE | 44 | 1e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1114 | CLENTEROTOXN | 28 | 0.036 | Clostridium enterotoxin signature. | |
>CLENTEROTOXN#Clostridium enterotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1118 | TCRTETOQM | 640 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 26 | jhp_1343 | jhp_1349 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1343 | 0 | 13 | 0.674869 | putative Inner membrane protein | |
| jhp_1344 | 0 | 11 | 0.695651 | putative | |
| jhp_1345 | 0 | 10 | 1.117488 | putative thiophene/furan oxidation protein | |
| jhp_1346 | 2 | 11 | 1.547096 | putative Outer membrane protein | |
| jhp_1347 | -1 | 15 | 0.847158 | putative | |
| jhp_1348 | -2 | 12 | 1.711553 | putative | |
| jhp_1349 | -2 | 12 | 1.785182 | conserved lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1343 | 60KDINNERMP | 418 | e-143 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1345 | TCRTETOQM | 36 | 3e-04 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1347 | BINARYTOXINB | 29 | 0.026 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1349 | LIPOLPP20 | 293 | e-105 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. | |||||
| 27 | jhp_1465 | jhp_1473 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| jhp_1465 | -1 | 12 | 1.990061 | FLAGELLAR HOOK-BASAL BODY COMPLEX PROTEIN | |
| jhp_1466 | -1 | 11 | 1.715566 | FLAGELLAR BASAL-BODY ROD PROTEIN | |
| jhp_1467 | -1 | 12 | 1.309792 | FLAGELLAR BASAL-BODY ROD PROTEIN | |
| jhp_1468 | 0 | 12 | 1.405738 | putative ROD SHAPE-DETERMINING PROTEIN | |
| jhp_1469 | 0 | 13 | 0.068546 | putative | |
| jhp_1470 | 0 | 12 | -0.173377 | putative | |
| jhp_1471 | 1 | 13 | -0.144269 | putative peroxidase | |
| jhp_1472 | 0 | 11 | -0.639634 | putative Outer membrane protein | |
| jhp_1473 | 0 | 12 | -0.705731 | PENICILLIN-BINDING PROTEIN |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1465 | FLGHOOKFLIE | 77 | 6e-22 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1466 | FLGHOOKAP1 | 28 | 0.013 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1469 | FERRIBNDNGPP | 37 | 7e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1470 | FERRIBNDNGPP | 33 | 0.001 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| jhp_1473 | TYPE3IMPPROT | 29 | 0.031 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||