| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | PSPPH_0054 | PSPPH_0065 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0054 | 5 | 11 | 3.272031 | lead uptake protein | |
| PSPPH_0055 | 5 | 13 | 2.632851 | homoserine/homoserine lactone efflux protein | |
| PSPPH_0056 | 6 | 12 | 2.474712 | hypothetical protein | |
| PSPPH_0057 | 7 | 13 | 2.337512 | ABC transporter ATP-binding protein | |
| PSPPH_0058 | 8 | 19 | 0.604651 | hypothetical protein | |
| PSPPH_0059 | 7 | 18 | 1.237180 | alginate regulatory protein AlgR3 | |
| PSPPH_0060 | 5 | 15 | 1.365562 | FKBP-type peptidylprolyl isomerase | |
| PSPPH_0061 | 5 | 17 | 1.685539 | anti-RNA polymerase sigma 70 factor | |
| PSPPH_0062 | 4 | 16 | 2.165017 | hypothetical protein | |
| PSPPH_0063 | 5 | 16 | 2.205370 | DsbB family protein | |
| PSPPH_0064 | 3 | 16 | 2.504160 | hemY protein | |
| PSPPH_0065 | 2 | 14 | 1.580770 | uroporphyrin-III C-methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0057 | GPOSANCHOR | 30 | 0.037 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0059 | IGASERPTASE | 44 | 5e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0060 | INFPOTNTIATR | 134 | 3e-41 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| 2 | PSPPH_0096 | PSPPH_0116 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0096 | 2 | 24 | -3.819435 | succinate-semialdehyde dehydrogenase I | |
| PSPPH_0097 | 3 | 34 | -5.624290 | pyridine nucleotide-disulfide oxidoreductase | |
| PSPPH_0099 | 3 | 21 | -5.442486 | *shufflon-specific recombinase | |
| PSPPH_0100 | 3 | 17 | -4.595755 | recombinase | |
| PSPPH_0101 | 4 | 19 | -5.335494 | ParB family protein | |
| PSPPH_0102 | 3 | 16 | -3.659681 | ParB-like nuclease | |
| PSPPH_0103 | 3 | 17 | -3.105156 | hypothetical protein | |
| PSPPH_0104 | 2 | 15 | -2.470345 | type I restriction-modification system | |
| PSPPH_0105 | 4 | 13 | -2.765505 | carbon storage regulator related protein | |
| PSPPH_0106 | 4 | 16 | -3.971690 | type I restriction-modification system | |
| PSPPH_0107 | 0 | 15 | -1.993461 | type I restriction-modification system DNA | |
| PSPPH_0108 | -1 | 30 | -2.994830 | lipoprotein | |
| PSPPH_0109 | 0 | 27 | -2.808887 | hypothetical protein | |
| PSPPH_0110 | 1 | 28 | -4.308558 | short chain dehydrogenase/reductase | |
| PSPPH_0111 | 4 | 32 | -6.416265 | acetyltransferase | |
| PSPPH_0112 | 3 | 34 | -7.630991 | hypothetical protein | |
| PSPPH_0113 | 3 | 33 | -7.437778 | ISPsy19, transposase | |
| PSPPH_0114 | 3 | 29 | -7.289936 | ISPsy2, transposase | |
| PSPPH_0115 | 4 | 26 | -6.270926 | lipoprotein | |
| PSPPH_0116 | 3 | 22 | -5.464878 | lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0110 | DHBDHDRGNASE | 52 | 3e-10 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 3 | PSPPH_0126 | PSPPH_0145 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0126 | 2 | 15 | 0.230342 | hypothetical protein | |
| PSPPH_0127 | 2 | 13 | 0.050943 | hypothetical protein | |
| PSPPH_0128 | 3 | 16 | -0.005528 | lipoprotein | |
| PSPPH_0129 | 3 | 17 | -0.047336 | ATP-dependent Clp protease ATP-binding subunit | |
| PSPPH_0130 | 4 | 13 | -1.475665 | ImpH | |
| PSPPH_0131 | 4 | 13 | -1.131241 | ImpG | |
| PSPPH_0132 | 3 | 15 | -0.473599 | hypothetical protein | |
| PSPPH_0133 | 2 | 16 | 0.817327 | hypothetical protein | |
| PSPPH_0134 | -1 | 17 | 1.561606 | hypothetical protein | |
| PSPPH_0135 | -2 | 16 | 2.048600 | hypothetical protein | |
| PSPPH_0136 | -2 | 17 | 2.377159 | hypothetical protein | |
| PSPPH_0138 | -2 | 18 | 2.379542 | hypothetical protein | |
| PSPPH_0139 | -1 | 17 | 2.425284 | oxidoreductase alpha (molybdopterin) subunit | |
| PSPPH_0140 | 0 | 14 | 2.440077 | formate dehydrogenase accessory protein FdhD | |
| PSPPH_0141 | 0 | 15 | 2.947229 | LysR family transcriptional regulator | |
| PSPPH_0142 | 0 | 16 | 3.580951 | HAD superfamily hydrolase | |
| PSPPH_0143 | -1 | 16 | 4.301873 | ADP-ribose diphosphatase NudE | |
| PSPPH_0144 | 0 | 17 | 3.942922 | 3'(2'),5'-bisphosphate nucleotidase | |
| PSPPH_0145 | -1 | 18 | 3.325474 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0138 | PF07132 | 31 | 0.002 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| 4 | PSPPH_0159 | PSPPH_0180 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0159 | 0 | 26 | -3.943619 | bifunctional antitoxin/transcriptional repressor | |
| PSPPH_0160 | -1 | 31 | -6.233283 | addiction module toxin RelE | |
| PSPPH_0161 | -1 | 33 | -6.557856 | ISPsy18, transposase, truncated | |
| PSPPH_0162 | -1 | 28 | -4.898997 | ISPsy20, transposase IstB | |
| PSPPH_0163 | 0 | 25 | -4.647952 | ISPsy20, transposase IstA | |
| PSPPH_0164 | 0 | 28 | -4.778509 | SciM protein | |
| PSPPH_0165 | 1 | 25 | -2.021128 | hypothetical protein | |
| PSPPH_0166 | 1 | 24 | -1.879431 | hypothetical protein | |
| PSPPH_0167 | 1 | 23 | -1.189360 | phage integrase site specific recombinase | |
| PSPPH_0169 | 0 | 24 | -1.488963 | ISPsy2, transposase | |
| PSPPH_0170 | 1 | 26 | -1.419109 | ISPsy19, transposase | |
| PSPPH_0171 | 1 | 26 | -1.419109 | type III effector HopR1 | |
| PSPPH_5226 | 1 | 26 | -4.319435 | HrpL-regulated protein | |
| PSPPH_0173 | 1 | 24 | -0.794442 | acetylornithine deacetylase | |
| PSPPH_0174 | 2 | 29 | -2.693022 | hypothetical protein | |
| PSPPH_0175 | 2 | 30 | -3.339477 | ISPsy2, transposase, truncated | |
| PSPPH_0176 | 3 | 31 | -3.805327 | ISPsy19, transposase | |
| PSPPH_0177 | 3 | 30 | -4.194744 | LysR family transcriptional regulator | |
| PSPPH_0178 | 3 | 29 | -3.681078 | Mg-chelatase subunits D/I family, ComM subfamily | |
| PSPPH_0179 | 4 | 29 | -4.228739 | ATPase AAA | |
| PSPPH_0180 | 2 | 20 | -2.891829 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0178 | PF05272 | 30 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0180 | SUBTILISIN | 68 | 3e-14 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| 5 | PSPPH_0411 | PSPPH_0438 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0411 | 2 | 14 | 2.838727 | LysR family transcriptional regulator | |
| PSPPH_0412 | 1 | 16 | 2.981430 | 3-oxoacyl-ACP synthase | |
| PSPPH_0413 | 0 | 14 | 2.792700 | 3-ketoacyl-ACP reductase | |
| PSPPH_0414 | 2 | 14 | 3.497457 | thioester dehydrase | |
| PSPPH_0415 | 2 | 15 | 3.235995 | 3-oxoacyl-ACP synthase | |
| PSPPH_0416 | 1 | 15 | 2.660510 | lipoprotein | |
| PSPPH_0417 | 2 | 16 | 3.242643 | hypothetical protein | |
| PSPPH_0418 | 2 | 16 | 3.364479 | FAD-binding protein | |
| PSPPH_0419 | 3 | 16 | 3.487759 | hypothetical protein | |
| PSPPH_0420 | 2 | 17 | 3.117818 | hypothetical protein | |
| PSPPH_0421 | 2 | 17 | 3.520881 | 4-hydroxybenzoyl-CoA thioesterase | |
| PSPPH_0422 | 2 | 18 | 3.484556 | phenylalanine ammonia-lyase/histidase | |
| PSPPH_0423 | 1 | 18 | 2.703493 | hypothetical protein | |
| PSPPH_0424 | 1 | 17 | 2.473749 | glycosyl transferase family protein | |
| PSPPH_0425 | 2 | 17 | 2.105689 | AMP-binding protein | |
| PSPPH_0426 | -1 | 15 | -0.084418 | intracellular septation protein A | |
| PSPPH_0427 | 0 | 15 | -0.025017 | acyl carrier protein | |
| PSPPH_0428 | 0 | 13 | 1.115841 | acyl carrier protein | |
| PSPPH_0429 | 0 | 11 | 2.089132 | acyltransferase | |
| PSPPH_0430 | 0 | 10 | 2.144723 | hypothetical protein | |
| PSPPH_0431 | 0 | 12 | 2.462100 | ParA family protein | |
| PSPPH_0432 | 1 | 12 | 3.607714 | PAAR motif-containing protein | |
| PSPPH_0433 | 1 | 12 | 3.575530 | malonate decarboxylase subunit alpha | |
| PSPPH_0434 | 3 | 13 | 4.565606 | triphosphoribosyl-dephospho-CoA synthase | |
| PSPPH_0435 | 2 | 15 | 3.895545 | malonate decarboxylase subunit delta | |
| PSPPH_0436 | 3 | 15 | 3.855168 | malonate decarboxylase subunit beta | |
| PSPPH_0437 | 2 | 16 | 3.343007 | malonate decarboxylase subunit gamma | |
| PSPPH_0438 | 2 | 14 | 2.530070 | phosphoribosyl-dephospho-CoA transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0413 | DHBDHDRGNASE | 108 | 7e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0419 | ACRIFLAVINRP | 42 | 9e-06 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 6 | PSPPH_0447 | PSPPH_0456 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0447 | 2 | 24 | 0.868209 | cytochrome b561 family protein | |
| PSPPH_0448 | 1 | 24 | 1.095354 | hypothetical protein | |
| PSPPH_0449 | -1 | 21 | 1.874970 | ATP-dependent RNA helicase RhlE | |
| PSPPH_0450 | -2 | 22 | 1.577254 | 5,10-methylenetetrahydrofolate reductase | |
| PSPPH_0451 | -2 | 22 | 2.494039 | S-adenosyl-L-homocysteine hydrolase | |
| PSPPH_0452 | 0 | 19 | 3.301238 | 4-hydroxybenzoyl-CoA thioesterase | |
| PSPPH_0453 | 0 | 20 | 3.458543 | hydroxypyruvate isomerase | |
| PSPPH_0454 | 0 | 22 | 3.515910 | gluconate transporter family protein | |
| PSPPH_0455 | -1 | 25 | 3.606605 | aldolase | |
| PSPPH_0456 | 0 | 25 | 3.353844 | HopAN1 protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0449 | SECA | 34 | 0.003 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0452 | FbpA_PF05833 | 27 | 0.020 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| 7 | PSPPH_0471 | PSPPH_0487 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0471 | -1 | 16 | 3.179724 | TM2 domain-containing protein | |
| PSPPH_0472 | -2 | 16 | 2.938239 | dihydroorotase | |
| PSPPH_0473 | 0 | 19 | 1.656703 | aspartate carbamoyltransferase | |
| PSPPH_0474 | 0 | 18 | 0.191346 | bifunctional pyrimidine regulatory protein | |
| PSPPH_0475 | 1 | 20 | -0.472669 | Holliday junction resolvase-like protein | |
| PSPPH_0476 | 2 | 19 | -0.627517 | hypothetical protein | |
| PSPPH_0477 | 1 | 14 | -0.376836 | TonB domain-containing protein | |
| PSPPH_0478 | 0 | 13 | 1.645938 | glutathione synthetase | |
| PSPPH_0479 | 0 | 13 | 1.766902 | type IV pilus response regulator PilG | |
| PSPPH_0480 | -1 | 12 | 2.058850 | type IV pilus response regulator PilH | |
| PSPPH_0481 | 0 | 12 | 2.070168 | type IV pilus biogenesis protein PilI | |
| PSPPH_0482 | -1 | 12 | 2.262730 | type IV pilus biogenesis protein PilJ | |
| PSPPH_0483 | 0 | 12 | 2.935760 | sensor histidine kinase/response regulator | |
| PSPPH_0484 | -2 | 11 | 3.412267 | chemotaxis protein CheW | |
| PSPPH_0485 | -1 | 12 | 3.567307 | hypothetical protein | |
| PSPPH_0486 | -2 | 16 | 3.560953 | GntR family transcriptional regulator | |
| PSPPH_0487 | -2 | 16 | 3.742059 | Na+/proline symporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0477 | PF03544 | 65 | 2e-14 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0478 | RTXTOXINC | 28 | 0.025 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0479 | HTHFIS | 69 | 6e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0480 | HTHFIS | 80 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0483 | HTHFIS | 69 | 1e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 8 | PSPPH_0565 | PSPPH_0574 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0565 | 3 | 19 | 0.387073 | RNA-binding protein Hfq | |
| PSPPH_0566 | 2 | 16 | 1.315479 | GTP-binding protein HflX | |
| PSPPH_0567 | 2 | 17 | 1.080198 | HflK protein | |
| PSPPH_0568 | 2 | 17 | 1.431635 | HflC protein | |
| PSPPH_0569 | 1 | 16 | 1.451886 | ATP phosphoribosyltransferase | |
| PSPPH_0570 | 2 | 17 | 0.959199 | adenylosuccinate synthetase | |
| PSPPH_0571 | 1 | 15 | 0.840976 | methyl-accepting chemotaxis protein | |
| PSPPH_0574 | 3 | 19 | -0.340024 | **ribonuclease R |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0567 | cloacin | 30 | 0.015 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 9 | PSPPH_0590 | PSPPH_0628 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0590 | 1 | 13 | -3.877630 | branched-chain amino acid ABC transporter | |
| PSPPH_0591 | 1 | 18 | -6.392614 | branched-chain amino acid ABC transporter | |
| PSPPH_0592 | 1 | 18 | -6.379690 | high-affinity branched-chain amino acid ABC | |
| PSPPH_0593 | 0 | 21 | -5.996062 | high affinity branched-chain amino acid ABC | |
| PSPPH_0594 | 0 | 16 | -4.089847 | high affinity branched-chain amino acid ABC | |
| PSPPH_0595 | 1 | 16 | -3.252225 | hypothetical protein | |
| PSPPH_0596 | 0 | 10 | -0.182490 | hypothetical protein | |
| PSPPH_0597 | -1 | 10 | 2.393776 | serine 3-dehydrogenase | |
| PSPPH_0598 | -2 | 10 | 1.986661 | N-acylglucosamine 2-epimerase | |
| PSPPH_0599 | -2 | 10 | 1.833136 | 1-deoxy-D-xylulose-5-phosphate synthase | |
| PSPPH_0600 | -1 | 12 | -0.484649 | geranyltranstransferase | |
| PSPPH_0601 | -1 | 16 | -1.944886 | exodeoxyribonuclease VII small subunit | |
| PSPPH_0602 | 0 | 16 | -2.183411 | cystathionine beta-lyase | |
| PSPPH_0603 | 2 | 26 | -4.531404 | hypothetical protein | |
| PSPPH_0604 | 3 | 34 | -6.653158 | glutathione S-transferase | |
| PSPPH_0605 | 3 | 40 | -7.932637 | O-antigen ABC transporter permease | |
| PSPPH_0606 | 3 | 40 | -7.821565 | ISPsy19, transposase | |
| PSPPH_0607 | 7 | 44 | -9.921841 | hypothetical protein | |
| PSPPH_0608 | 6 | 44 | -9.393609 | pancortin-3 | |
| PSPPH_0609 | 7 | 42 | -9.052426 | hypothetical protein | |
| PSPPH_0610 | 7 | 41 | -8.273323 | hypothetical protein | |
| PSPPH_0611 | 8 | 42 | -8.648252 | hypothetical protein | |
| PSPPH_0612 | 7 | 35 | -7.102146 | hypothetical protein | |
| PSPPH_0613 | 4 | 17 | -3.779042 | hypothetical protein | |
| PSPPH_0614 | 3 | 10 | -2.483607 | hypothetical protein | |
| PSPPH_0615 | 4 | 11 | -2.490377 | hypothetical protein | |
| PSPPH_0616 | 2 | 10 | -1.199290 | hypothetical protein | |
| PSPPH_0617 | 1 | 9 | -0.593270 | ISPsy18, transposase | |
| PSPPH_0619 | 2 | 12 | 0.039334 | RNA polymerase sigma factor RpoD | |
| PSPPH_0620 | 3 | 11 | 0.961279 | DNA primase | |
| PSPPH_0621 | 2 | 11 | 1.604002 | 30S ribosomal protein S21 | |
| PSPPH_0622 | -1 | 11 | 0.478941 | DNA-binding/iron metalloprotein/AP endonuclease | |
| PSPPH_0623 | -1 | 12 | -0.823957 | glycerol-3-phosphate acyltransferase PlsY | |
| PSPPH_0624 | 1 | 14 | -1.929592 | dihydroneopterin aldolase | |
| PSPPH_0625 | 1 | 14 | -2.137595 | 2-amino-4-hydroxy-6- | |
| PSPPH_0626 | 1 | 14 | -1.956983 | multifunctional tRNA nucleotidyl | |
| PSPPH_0627 | 1 | 14 | -2.638134 | SpoVR family protein | |
| PSPPH_0628 | 2 | 15 | -2.037037 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0592 | PREPILNPTASE | 31 | 0.007 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0593 | PF05272 | 37 | 1e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0597 | DHBDHDRGNASE | 82 | 1e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 10 | PSPPH_0742 | PSPPH_0784 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0742 | 3 | 22 | -5.979221 | clpB protein | |
| PSPPH_0747 | 4 | 31 | -7.423486 | ****hypothetical protein | |
| PSPPH_0748 | 6 | 35 | -10.086638 | ISPsy18, transposase, truncated | |
| PSPPH_0749 | 6 | 38 | -10.609392 | hypothetical protein | |
| PSPPH_0750 | 6 | 35 | -10.185786 | hypothetical protein | |
| PSPPH_0751 | 5 | 34 | -10.269218 | hypothetical protein | |
| PSPPH_0752 | 4 | 27 | -6.877934 | DNA topoisomerase III | |
| PSPPH_0753 | 3 | 29 | -7.574264 | DNA repair ATPase | |
| PSPPH_0755 | 3 | 25 | -3.363817 | TetR family transcriptional regulator | |
| PSPPH_0756 | 3 | 20 | -2.274624 | glycosyl hydrolase | |
| PSPPH_0757 | 2 | 22 | -1.035083 | hypothetical protein | |
| PSPPH_0758 | 2 | 26 | -1.873210 | phage integrase site specific recombinase | |
| PSPPH_0759 | 3 | 32 | -3.855298 | type IV pilus protein PilM | |
| PSPPH_0760 | 2 | 30 | -3.824274 | type IV pilus protein PilV2 , truncated | |
| PSPPH_0761 | 3 | 34 | -4.723508 | hypothetical protein | |
| PSPPH_0762 | 5 | 42 | -8.351861 | hypothetical protein | |
| PSPPH_0763 | 3 | 38 | -7.395540 | type III helper protein HopAJ1 | |
| PSPPH_5225 | 2 | 40 | -7.372276 | type III effector HopAT1 | |
| PSPPH_0764 | 3 | 40 | -7.897600 | RNA polymerase-binding protein DksA | |
| PSPPH_0765 | 3 | 44 | -9.119735 | hypothetical protein | |
| PSPPH_0767 | 3 | 44 | -9.474620 | type III effector HopG1 | |
| PSPPH_0768 | 2 | 43 | -8.632970 | thioredoxin | |
| PSPPH_0769 | 3 | 48 | -10.514397 | ISPsy19, transposase | |
| PSPPH_0770 | 3 | 48 | -10.532347 | response regulator/sensor histidine kinase | |
| PSPPH_0771 | 3 | 54 | -11.704890 | diguanylate phosphodiesterase | |
| PSPPH_0772 | 4 | 52 | -11.352980 | hypothetical protein | |
| PSPPH_0774 | 3 | 45 | -7.727362 | adhesin | |
| PSPPH_0775 | 1 | 32 | -4.576063 | periplasmic chaperone protein | |
| PSPPH_0776 | 1 | 29 | -3.559681 | ISPsy19, transposase | |
| PSPPH_0777 | 1 | 29 | -3.534864 | response regulator/sensor histidine kinase | |
| PSPPH_0778 | 2 | 28 | -3.485865 | LuxR family transcriptional regulator | |
| PSPPH_0780 | 1 | 27 | -2.640308 | OMP85 family outer membrane protein | |
| PSPPH_0781 | 1 | 27 | -3.418287 | hemagglutination activity domain-containing | |
| PSPPH_0782 | 0 | 32 | -5.511196 | RulB | |
| PSPPH_0783 | 1 | 24 | -2.880384 | hypothetical protein | |
| PSPPH_0784 | 1 | 25 | -3.435256 | type III effector AvrB4-2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0742 | HTHFIS | 42 | 1e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0748 | FLGMOTORFLIG | 26 | 0.045 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0755 | HTHTETR | 91 | 1e-24 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0756 | BINARYTOXINB | 45 | 2e-06 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0770 | HTHFIS | 68 | 7e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0778 | HTHFIS | 54 | 7e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0780 | NEISSPPORIN | 30 | 0.025 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0781 | PF05860 | 66 | 9e-15 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| 11 | PSPPH_0810 | PSPPH_0820 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0810 | 3 | 24 | -4.153158 | MOSC domain-containing protein | |
| PSPPH_0811 | 3 | 25 | -4.305970 | hypothetical protein | |
| PSPPH_0812 | 3 | 24 | -4.290436 | outer membrane efflux protein | |
| PSPPH_0813 | 3 | 24 | -4.312985 | hypothetical protein | |
| PSPPH_0814 | 3 | 26 | -4.989797 | HlyD family type I secretion membrane fusion | |
| PSPPH_0815 | 4 | 27 | -5.487567 | calcium binding hemolysin protein | |
| PSPPH_0816 | 1 | 19 | -4.757290 | zinc-binding protein | |
| PSPPH_0817 | 1 | 17 | -4.534857 | dephospho-CoA kinase | |
| PSPPH_0818 | 0 | 21 | -4.768975 | type IV pilus prepilin peptidase PilD | |
| PSPPH_0819 | 0 | 22 | -5.426225 | type IV pilus biogenesis protein PilC | |
| PSPPH_0820 | 1 | 20 | -3.566385 | type IV pilus biogenesis protein PilB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0813 | ACRIFLAVINRP | 30 | 0.040 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0814 | RTXTOXIND | 357 | e-121 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0815 | RTXTOXINA | 134 | 5e-33 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0818 | PREPILNPTASE | 345 | e-122 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0819 | BCTERIALGSPF | 434 | e-153 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| 12 | PSPPH_0832 | PSPPH_0847 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0832 | 2 | 19 | -1.252253 | HAD superfamily hydrolase | |
| PSPPH_0833 | 3 | 22 | -1.544071 | tellurium resistance protein TerZ | |
| PSPPH_0834 | 3 | 18 | -1.708351 | tellurium resistance protein TerA | |
| PSPPH_0835 | 3 | 18 | -1.868958 | tellurium resistance protein TerB | |
| PSPPH_0836 | 1 | 15 | -0.700106 | tellurium resistance protein TerC | |
| PSPPH_0837 | 1 | 12 | -0.284188 | tellurium resistance protein TerD | |
| PSPPH_0838 | 1 | 11 | -0.174464 | tellurium resistance protein TerE | |
| PSPPH_0839 | 1 | 10 | 0.499728 | tellurium resistance protein | |
| PSPPH_0840 | 2 | 12 | 1.202456 | hypothetical protein | |
| PSPPH_0841 | 3 | 12 | 1.063211 | nicotinate-nucleotide pyrophosphorylase | |
| PSPPH_0842 | 3 | 9 | 2.439807 | hypothetical protein | |
| PSPPH_0843 | 4 | 12 | 3.218407 | N-acetyl-anhydromuranmyl-L-alanine amidase | |
| PSPPH_0844 | 3 | 12 | 3.302203 | inner membrane protein AmpE | |
| PSPPH_0845 | 2 | 11 | 3.530124 | TatD family hydrolase | |
| PSPPH_0846 | 1 | 10 | 3.544219 | DNA-binding transcriptional regulator FruR | |
| PSPPH_0847 | 0 | 13 | 3.431516 | phosphoenolpyruvate-protein phosphotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0834 | PF05616 | 33 | 0.002 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0836 | BCTERIALGSPG | 30 | 0.005 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0847 | PHPHTRNFRASE | 607 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 13 | PSPPH_0884 | PSPPH_0891 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0884 | 2 | 13 | 1.090354 | hypothetical protein | |
| PSPPH_0885 | 0 | 13 | 1.495637 | hypothetical protein | |
| PSPPH_0886 | 2 | 11 | 1.556711 | hypothetical protein | |
| PSPPH_0887 | 2 | 12 | 1.025323 | hypothetical protein | |
| PSPPH_0888 | 2 | 12 | -0.458583 | ribosomal-protein-alanine acetyltransferase | |
| PSPPH_0889 | 1 | 12 | -0.198791 | hypothetical protein | |
| PSPPH_0890 | 2 | 10 | 0.112674 | carbonic anhydrase | |
| PSPPH_0891 | 2 | 11 | 0.030635 | methyl-accepting chemotaxis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0884 | CHANLCOLICIN | 34 | 0.002 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0887 | PF03544 | 31 | 0.002 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0888 | SACTRNSFRASE | 38 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 14 | PSPPH_0942 | PSPPH_0978 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0942 | 3 | 27 | -3.117840 | hypothetical protein | |
| PSPPH_0943 | 3 | 22 | -3.185736 | circadian oscillation regulator KaiC-like | |
| PSPPH_0944 | 1 | 15 | -1.606989 | histidine kinase-response regulator hybrid | |
| PSPPH_0945 | 1 | 11 | -0.729448 | ISPsy22, transposase truncated | |
| PSPPH_0946 | 0 | 9 | -0.398490 | hypothetical protein | |
| PSPPH_0947 | 0 | 10 | -1.160533 | hypothetical protein | |
| PSPPH_0949 | -1 | 9 | -1.350807 | *DnaJ domain-containing protein | |
| PSPPH_0950 | -2 | 11 | -1.620778 | methyl-accepting chemotaxis protein | |
| PSPPH_0951 | -1 | 14 | -3.263296 | glycosyltransferase WbpZ | |
| PSPPH_0952 | -1 | 15 | -4.030601 | NAD dependent epimerase/dehydratase | |
| PSPPH_0953 | 0 | 19 | -4.542512 | GDP-mannose 4,6-dehydratase | |
| PSPPH_0954 | -1 | 25 | -5.127344 | lipopolysaccharide ABC export system, permease | |
| PSPPH_0955 | 0 | 27 | -5.658086 | lipopolysaccharide ABC export system, | |
| PSPPH_0956 | 1 | 28 | -5.653130 | WbbD | |
| PSPPH_0957 | 0 | 28 | -5.814181 | mannosyltransferase | |
| PSPPH_0958 | 1 | 29 | -6.080425 | CDP-glucose-4,6-dehydratase | |
| PSPPH_0959 | 1 | 32 | -7.450027 | hypothetical protein | |
| PSPPH_0960 | 2 | 34 | -8.383360 | glycosyl transferase family protein | |
| PSPPH_0961 | 2 | 33 | -8.113106 | glucose-1-phosphate cytidylyltransferase | |
| PSPPH_0962 | 3 | 31 | -7.625168 | hypothetical protein | |
| PSPPH_0963 | 3 | 27 | -6.933821 | hypothetical protein | |
| PSPPH_0964 | 2 | 26 | -6.139396 | hypothetical protein | |
| PSPPH_0965 | 1 | 25 | -6.172737 | hypothetical protein | |
| PSPPH_0966 | 0 | 24 | -7.070562 | ISPsy23, transposition helper protein | |
| PSPPH_0967 | 3 | 36 | -11.654283 | glucose-1-phosphate thymidylyltransferase | |
| PSPPH_0968 | 3 | 40 | -12.673347 | dTDP-4-dehydrorhamnose reductase | |
| PSPPH_0969 | 4 | 45 | -14.117747 | dTDP-glucose 4,6-dehydratase | |
| PSPPH_0970 | 4 | 42 | -12.000466 | O-methyltransferase I | |
| PSPPH_0971 | 5 | 39 | -10.874508 | hypothetical protein | |
| PSPPH_0972 | 4 | 33 | -8.354107 | hypothetical protein | |
| PSPPH_0973 | 1 | 22 | -3.270009 | hypothetical protein | |
| PSPPH_0974 | 2 | 21 | -1.389077 | transcriptional activator RfaH | |
| PSPPH_0975 | 1 | 17 | -0.764610 | glycosyl transferase family protein | |
| PSPPH_0976 | 1 | 17 | -1.854273 | hypothetical protein | |
| PSPPH_0977 | 1 | 16 | -1.812182 | glycosyl transferase family protein | |
| PSPPH_0978 | 2 | 17 | -2.215166 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0944 | HTHFIS | 73 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0949 | CHANLCOLICIN | 29 | 0.030 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0952 | NUCEPIMERASE | 103 | 1e-27 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0953 | NUCEPIMERASE | 111 | 3e-30 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0958 | NUCEPIMERASE | 104 | 1e-27 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0960 | TCRTETB | 29 | 0.022 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0966 | HTHFIS | 33 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0968 | NUCEPIMERASE | 40 | 8e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0969 | NUCEPIMERASE | 184 | 1e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0978 | RTXTOXINA | 44 | 1e-06 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 15 | PSPPH_1137 | PSPPH_1146 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1137 | -1 | 23 | -4.989132 | hypothetical protein | |
| PSPPH_1138 | -1 | 26 | -5.418297 | GIY-YIG nuclease superfamily protein | |
| PSPPH_1139 | -1 | 28 | -5.742491 | hypothetical protein | |
| PSPPH_1140 | 1 | 22 | -5.493952 | ISPsy20, transposase IstA | |
| PSPPH_1141 | 3 | 25 | -6.671759 | ISPsy20, transposase IstB | |
| PSPPH_1142 | 3 | 26 | -5.966717 | hypothetical protein | |
| PSPPH_1143 | 3 | 22 | -3.043338 | hypothetical protein | |
| PSPPH_1144 | 2 | 22 | -2.900186 | hypothetical protein | |
| PSPPH_1145 | 3 | 23 | -3.226941 | nucleoid-associated protein NdpA | |
| PSPPH_1146 | 2 | 22 | -2.789850 | TetR family transcriptional regulator |
| 16 | PSPPH_1206 | PSPPH_1214 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1206 | 3 | 20 | -1.975866 | acetyltransferase | |
| PSPPH_1207 | 3 | 21 | -2.109374 | chemotaxis protein CheV | |
| PSPPH_1208 | 3 | 25 | -2.699830 | hypothetical protein | |
| PSPPH_1209 | 3 | 23 | -2.765174 | disulfide bond formation protein B | |
| PSPPH_1210 | 4 | 23 | -3.149859 | cytochrome o ubiquinol oxidase subunit II | |
| PSPPH_1211 | 3 | 19 | -2.847453 | cytochrome o ubiquinol oxidase subunit I | |
| PSPPH_1212 | 2 | 13 | -3.880895 | cytochrome o ubiquinol oxidase subunit III | |
| PSPPH_1213 | 1 | 13 | -3.623517 | cytochrome o ubiquinol oxidase subunit IV | |
| PSPPH_1214 | -1 | 13 | -3.147232 | protoheme IX farnesyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1206 | SACTRNSFRASE | 40 | 6e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1207 | HTHFIS | 57 | 2e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 17 | PSPPH_1226 | PSPPH_1237 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1226 | 1 | 20 | -3.461529 | hypothetical protein | |
| PSPPH_1227 | -2 | 22 | -3.279100 | hypothetical protein | |
| PSPPH_1229 | 0 | 20 | -3.114803 | sensory box-containing diguanylate cyclase | |
| PSPPH_1230 | 1 | 16 | -1.544071 | hypothetical protein | |
| PSPPH_1231 | 3 | 17 | -0.042782 | hypothetical protein | |
| PSPPH_1232 | 1 | 17 | 1.262013 | hypothetical protein | |
| PSPPH_1233 | 2 | 14 | 2.768388 | GntR family transcriptional regulator | |
| PSPPH_1234 | 1 | 13 | 3.687737 | hypothetical protein | |
| PSPPH_1235 | 1 | 13 | 3.392764 | isochorismatase | |
| PSPPH_1237 | 0 | 14 | 3.033433 | isochorismatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1235 | ISCHRISMTASE | 63 | 7e-14 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1237 | ISCHRISMTASE | 48 | 2e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 18 | PSPPH_1271 | PSPPH_1286 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1271 | 2 | 15 | -0.470479 | type III transcriptional regulator HrpS | |
| PSPPH_1272 | 4 | 16 | 0.347518 | type III helper protein HrpA2 | |
| PSPPH_1273 | 4 | 17 | 0.077070 | type III restriction system endonuclease | |
| PSPPH_1274 | 2 | 18 | 0.611842 | type III secretion component protein HrpB | |
| PSPPH_1275 | 0 | 15 | 0.125274 | type III secretion component protein HrcJ | |
| PSPPH_1276 | 0 | 16 | -0.153033 | type III secretion component protein HrpD | |
| PSPPH_1277 | 0 | 14 | -0.520680 | type III secretion component protein HrpE | |
| PSPPH_1278 | 0 | 15 | -1.373340 | type III secretion component protein HrpF | |
| PSPPH_1279 | -1 | 13 | -0.560937 | type III secretion component protein HrpG | |
| PSPPH_1280 | -1 | 12 | -0.677125 | type III outer membrane protein HrcC | |
| PSPPH_5227 | 2 | 15 | -0.715174 | HrpT protein | |
| PSPPH_1281 | 3 | 13 | -0.244084 | type III negative regulator of hrp expression | |
| PSPPH_1282 | 3 | 15 | 1.212756 | type III secretion component protein HrcU | |
| PSPPH_1283 | 3 | 17 | 2.645839 | type III secretion component protein HrcT | |
| PSPPH_1284 | 2 | 18 | 2.350331 | type III secretion component protein HrcS | |
| PSPPH_1285 | 1 | 16 | 3.251761 | type III secretion system protein | |
| PSPPH_1286 | 1 | 16 | 3.564508 | type III secretion component protein HrcQb |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1271 | HTHFIS | 257 | 4e-85 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1275 | FLGMRINGFLIF | 95 | 2e-24 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1277 | FLGFLIH | 28 | 0.026 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1280 | TYPE3OMGPROT | 608 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1282 | TYPE3IMSPROT | 428 | e-153 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1283 | TYPE3IMRPROT | 166 | 1e-52 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1284 | TYPE3IMQPROT | 77 | 1e-22 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1285 | TYPE3IMPPROT | 240 | 3e-83 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1286 | TYPE3OMOPROT | 47 | 4e-09 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| 19 | PSPPH_1306 | PSPPH_1311 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1306 | 2 | 22 | -0.149050 | RNA methyltransferase | |
| PSPPH_1307 | 3 | 24 | -0.769536 | serine O-acetyltransferase | |
| PSPPH_1308 | 4 | 21 | -0.348912 | iron-sulfur cluster assembly transcription | |
| PSPPH_1309 | 4 | 21 | -0.332629 | cysteine desulfurase | |
| PSPPH_1310 | 2 | 21 | -0.211529 | scaffold protein | |
| PSPPH_1311 | 2 | 22 | -0.235198 | iron-sulfur cluster assembly protein IscA |
| 20 | PSPPH_1432 | PSPPH_1452 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1432 | 2 | 14 | 0.135619 | ABC transporter ATP-binding protein/permease | |
| PSPPH_1433 | 2 | 16 | 0.843319 | peptidyl-prolyl cis-trans isomerase A | |
| PSPPH_1434 | 2 | 14 | 1.255695 | 3-oxoadipate enol-lactonase | |
| PSPPH_1435 | 1 | 13 | 1.390046 | LysR family transcriptional regulator | |
| PSPPH_1436 | 2 | 13 | 1.019474 | hypothetical protein | |
| PSPPH_1437 | 1 | 11 | 0.573658 | hypothetical protein | |
| PSPPH_1438 | 0 | 9 | -0.445755 | poly(beta-D-mannuronate) C5 epimerase 3 | |
| PSPPH_1439 | -2 | 18 | -2.203539 | carboxylate/amino acid/amine transporter | |
| PSPPH_1440 | -1 | 22 | -3.109814 | short chain dehydrogenase/reductase | |
| PSPPH_1441 | 0 | 24 | -3.908658 | hypothetical protein | |
| PSPPH_1442 | 1 | 25 | -5.206061 | ISPsy18, transposase | |
| PSPPH_1443 | 0 | 28 | -5.274259 | type III effector HopAF1 | |
| PSPPH_1444 | -1 | 19 | -3.000458 | transposase, truncated | |
| PSPPH_1445 | 3 | 19 | -2.860273 | hypothetical protein | |
| PSPPH_1446 | 3 | 25 | -6.185168 | ISPsy22, transposase truncated | |
| PSPPH_1448 | 6 | 28 | -7.059141 | hypothetical protein | |
| PSPPH_1449 | 5 | 28 | -6.333688 | hypothetical protein | |
| PSPPH_1450 | 6 | 29 | -6.532032 | Rhs family protein | |
| PSPPH_1451 | 4 | 26 | -5.794652 | Rhs family protein | |
| PSPPH_1452 | 2 | 31 | -6.500428 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1438 | CABNDNGRPT | 91 | 7e-21 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1440 | DHBDHDRGNASE | 94 | 4e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1448 | ENTEROVIROMP | 28 | 0.010 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| 21 | PSPPH_1594 | PSPPH_1601 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1594 | -1 | 17 | -3.472069 | ABC transporter substrate-binding protein | |
| PSPPH_1595 | -1 | 24 | -3.665607 | GntR family transcriptional regulator | |
| PSPPH_1597 | 0 | 22 | -3.259760 | ISPsy18, transposase | |
| PSPPH_1599 | 0 | 24 | -3.553299 | aminopeptidase | |
| PSPPH_1600 | 0 | 24 | -4.037966 | ISPsy19, transposase | |
| PSPPH_1601 | 1 | 19 | -3.582511 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1599 | PF05616 | 29 | 0.029 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| 22 | PSPPH_1627 | PSPPH_1632 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1627 | 2 | 18 | 1.601200 | biopolymer ExbD/TolR family transporter | |
| PSPPH_1628 | 3 | 17 | 1.609518 | tetraacyldisaccharide 4'-kinase | |
| PSPPH_1629 | 3 | 16 | 1.371637 | tetraacyldisaccharide 4'-kinase | |
| PSPPH_1630 | 3 | 16 | 1.102364 | 3-deoxy-manno-octulosonate cytidylyltransferase | |
| PSPPH_1631 | 3 | 16 | 0.938311 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
| PSPPH_1632 | 3 | 16 | 0.800287 | ribonuclease, Rne/Rng family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1632 | IGASERPTASE | 59 | 7e-11 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 23 | PSPPH_1687 | PSPPH_1697 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1687 | 1 | 23 | -3.287870 | bifunctional 5,10-methylene-tetrahydrofolate | |
| PSPPH_1691 | 1 | 28 | -4.222983 | ***hypothetical protein | |
| PSPPH_1692 | 2 | 26 | -5.164693 | hypothetical protein | |
| PSPPH_1693 | 1 | 26 | -5.253240 | hypothetical protein | |
| PSPPH_1694 | 1 | 21 | -3.911612 | hypothetical protein | |
| PSPPH_1695 | 1 | 18 | -2.959524 | lipoprotein | |
| PSPPH_1696 | 2 | 19 | -2.820337 | hypothetical protein | |
| PSPPH_1697 | 2 | 19 | -2.673805 | trigger factor |
| 24 | PSPPH_1746 | PSPPH_1751 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1746 | 1 | 11 | 3.762124 | aldo/keto reductase | |
| PSPPH_1747 | 1 | 12 | 3.862643 | haloacid dehalogenase | |
| PSPPH_1748 | 1 | 12 | 3.816456 | acetyltransferase | |
| PSPPH_1749 | 2 | 12 | 3.970996 | non-ribosomal peptide synthetase | |
| PSPPH_1750 | 2 | 12 | 3.782934 | non-ribosomal peptide synthetase | |
| PSPPH_1751 | 2 | 11 | 3.271845 | non-ribosomal peptide synthetase/polyketide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1748 | SACTRNSFRASE | 46 | 6e-09 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 25 | PSPPH_1871 | PSPPH_1918 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1871 | 2 | 24 | -4.975311 | glutamate carboxypeptidase | |
| PSPPH_1872 | 1 | 31 | -6.240349 | ultraviolet light resistance protein RulA | |
| PSPPH_1873 | 2 | 32 | -6.506232 | hypothetical protein | |
| PSPPH_1874 | 1 | 28 | -5.486137 | sensor histidine kinase | |
| PSPPH_1875 | 1 | 30 | -4.917665 | hypothetical protein | |
| PSPPH_1876 | 1 | 27 | -4.489707 | hypothetical protein | |
| PSPPH_1878 | -1 | 21 | -2.278212 | ISPsy19, transposase | |
| PSPPH_1880 | 1 | 23 | -3.405295 | prophage PSPPH02, tail protein X | |
| PSPPH_1881 | 1 | 22 | -3.363702 | prophage PSPPH02, late control gene D protein | |
| PSPPH_1882 | 1 | 23 | -3.975964 | prophage PSPPH02 chitinase | |
| PSPPH_1883 | 2 | 23 | -4.529495 | prophage PSPPH02 adenine modification | |
| PSPPH_1885 | 2 | 23 | -4.802812 | hypothetical protein | |
| PSPPH_1886 | 2 | 30 | -4.712599 | hypothetical protein | |
| PSPPH_1887 | 0 | 25 | -3.081125 | prophage PSPPH02, ISPsy18, transposase | |
| PSPPH_1888 | 0 | 28 | -2.938947 | hypothetical protein | |
| PSPPH_1889 | 2 | 29 | -2.975118 | prophage PSPPH02, lambda family holin | |
| PSPPH_1890 | 3 | 32 | -3.994715 | hypothetical protein | |
| PSPPH_1891 | 4 | 43 | -8.615815 | hypothetical protein | |
| PSPPH_1892 | 5 | 40 | -8.468617 | prophage PSPPH02 late control gene D protein | |
| PSPPH_1893 | 4 | 40 | -8.283769 | prophage PSPPH02 chitinase | |
| PSPPH_1894 | 3 | 38 | -7.603585 | prophage PSPPH02 adenine modification | |
| PSPPH_1895 | 3 | 37 | -7.496380 | RulB domain-containing protein | |
| PSPPH_1896 | 2 | 34 | -6.958256 | Iron-regulated protein frpC | |
| PSPPH_1897 | -1 | 23 | -3.830328 | chorismate mutase | |
| PSPPH_1898 | -1 | 22 | -3.257507 | tRNA-dihydrouridine synthase A | |
| PSPPH_1899 | -1 | 21 | -3.263997 | glucan biosynthesis protein D | |
| PSPPH_1900 | 0 | 13 | -1.986575 | GtrC | |
| PSPPH_1901 | -1 | 11 | -0.741257 | hypothetical protein | |
| PSPPH_1902 | 0 | 13 | 0.859491 | ISPsy18, transposase | |
| PSPPH_1903 | 0 | 14 | 1.259167 | universal stress protein family protein | |
| PSPPH_1904 | 0 | 14 | 1.203304 | response regulator | |
| PSPPH_1905 | 0 | 14 | 1.657496 | sensory box histidine kinase/response regulator | |
| PSPPH_1906 | 1 | 16 | 3.858364 | LuxR family transcriptional regulator | |
| PSPPH_1907 | 1 | 14 | 3.809654 | sensor histidine kinase | |
| PSPPH_1908 | 1 | 14 | 3.769869 | hypothetical protein | |
| PSPPH_1909 | 1 | 15 | 3.949891 | extracytoplasmic-function sigma-70 factor | |
| PSPPH_1910 | 1 | 16 | 4.025301 | pyoverdine synthetase, thioesterase component | |
| PSPPH_1911 | 1 | 16 | 4.046600 | peptide synthase | |
| PSPPH_1912 | 0 | 17 | 3.037050 | diaminobutyrate--2-oxoglutarate | |
| PSPPH_1913 | 0 | 19 | 3.107044 | balhimycin biosynthetic protein MbtH | |
| PSPPH_1914 | 1 | 18 | 3.549088 | ABC transporter substrate-binding protein | |
| PSPPH_1915 | 1 | 20 | 3.488463 | cation ABC transporter permease | |
| PSPPH_1916 | 0 | 21 | 3.285905 | cation ABC transporter ATP-binding protein | |
| PSPPH_1917 | 0 | 23 | 2.602277 | cation ABC transporter substrate-binding | |
| PSPPH_1918 | 0 | 18 | 3.317465 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1872 | BLACTAMASEA | 26 | 0.043 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1896 | RTXTOXINA | 58 | 2e-10 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1904 | HTHFIS | 76 | 7e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1905 | HTHFIS | 58 | 7e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1906 | HTHFIS | 58 | 6e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1914 | adhesinb | 55 | 8e-11 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1917 | ADHESNFAMILY | 170 | 3e-53 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 26 | PSPPH_1973 | PSPPH_2037 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1973 | 3 | 27 | -0.733731 | hypothetical protein | |
| PSPPH_1974 | 2 | 28 | -0.818106 | type II citrate synthase | |
| PSPPH_1975 | 2 | 26 | -1.043794 | hypothetical protein | |
| PSPPH_1976 | 3 | 27 | -1.039580 | succinate dehydrogenase, cytochrome b556 | |
| PSPPH_1977 | 2 | 28 | -0.787562 | succinate dehydrogenase, hydrophobic membrane | |
| PSPPH_1978 | 2 | 29 | -0.693093 | succinate dehydrogenase flavoprotein subunit | |
| PSPPH_1979 | 3 | 29 | -0.751150 | succinate dehydrogenase iron-sulfur subunit | |
| PSPPH_1980 | 1 | 24 | -0.331478 | 2-oxoglutarate dehydrogenase E1 | |
| PSPPH_1981 | 1 | 26 | -0.480883 | dihydrolipoamide succinyltransferase | |
| PSPPH_1982 | 1 | 24 | -0.667760 | dihydrolipoamide dehydrogenase | |
| PSPPH_1983 | 1 | 20 | -0.732307 | succinyl-CoA synthetase subunit beta | |
| PSPPH_1984 | 0 | 19 | -0.512766 | succinyl-CoA synthetase subunit alpha | |
| PSPPH_1985 | 0 | 15 | -0.520680 | branched-chain amino acid transport system II | |
| PSPPH_1986 | 2 | 14 | -1.546451 | lipoprotein | |
| PSPPH_1987 | 1 | 13 | -1.012200 | heat shock protein 90 | |
| PSPPH_1988 | 0 | 12 | -0.916585 | dienelactone hydrolase | |
| PSPPH_1989 | -1 | 12 | -0.525777 | 3-oxoacyl-ACP synthase | |
| PSPPH_1990 | -1 | 15 | -0.550983 | 3-hydroxydecanoyl-ACP dehydratase | |
| PSPPH_1992 | -1 | 15 | 0.137361 | ISPsy18, transposase | |
| PSPPH_1994 | -1 | 17 | 1.617318 | NAD(P)H-dependent glycerol-3-phosphate | |
| PSPPH_1995 | 1 | 15 | 2.125329 | hypothetical protein | |
| PSPPH_1996 | 3 | 14 | 2.777473 | phosphohistidine phosphatase SixA | |
| PSPPH_1997 | 3 | 14 | 2.288020 | thioesterase | |
| PSPPH_1998 | 3 | 12 | 2.419685 | hypothetical protein | |
| PSPPH_1999 | 2 | 11 | 2.538512 | lipase | |
| PSPPH_2000 | 0 | 11 | 1.859602 | hypothetical protein | |
| PSPPH_2001 | -1 | 10 | 0.631518 | lipoprotein | |
| PSPPH_2002 | 1 | 14 | -1.122411 | calcium-binding protein | |
| PSPPH_2003 | 3 | 18 | -1.486807 | sensor histidine kinase | |
| PSPPH_2004 | 4 | 20 | -2.058265 | DNA-binding response regulator | |
| PSPPH_2005 | 3 | 18 | -1.406695 | hypothetical protein | |
| PSPPH_2006 | 2 | 18 | -1.521662 | ISPsy19, transposase | |
| PSPPH_2007 | 4 | 16 | -1.152591 | hypothetical protein | |
| PSPPH_2009 | 2 | 14 | -0.746791 | hypothetical protein | |
| PSPPH_2010 | 2 | 14 | -0.434930 | fimbrial protein | |
| PSPPH_2011 | 2 | 12 | -0.326019 | outer membrane usher protein fimD | |
| PSPPH_2012 | 0 | 11 | 0.113616 | chaperone protein PapD | |
| PSPPH_2013 | -1 | 15 | 1.680057 | type I fimbrial protein FimA | |
| PSPPH_2014 | -1 | 15 | 1.944501 | ISPsy18, transposase | |
| PSPPH_2015 | 1 | 19 | 3.491666 | LuxR family transcriptional regulator | |
| PSPPH_2016 | 1 | 17 | 4.445508 | K+-transporting ATPase subunit F | |
| PSPPH_2017 | 1 | 16 | 4.290886 | potassium-transporting ATPase subunit A | |
| PSPPH_2018 | 1 | 15 | 4.261133 | K+-transporting ATPase subunit B | |
| PSPPH_2019 | 1 | 16 | 4.071519 | potassium-transporting ATPase subunit B | |
| PSPPH_2020 | 1 | 17 | 3.917190 | potassium-transporting ATPase subunit C | |
| PSPPH_2021 | 1 | 15 | 3.487888 | sensor protein KdpD | |
| PSPPH_2022 | 2 | 15 | 2.345767 | KDP operon transcriptional regulatory protein | |
| PSPPH_2023 | 2 | 14 | 2.585669 | lipoprotein | |
| PSPPH_2024 | 2 | 15 | 2.569617 | moxR protein | |
| PSPPH_2025 | 3 | 13 | 2.359010 | hypothetical protein | |
| PSPPH_2026 | 3 | 12 | 2.349831 | transglutaminase | |
| PSPPH_2027 | 2 | 12 | 1.951648 | CHAD domain-containing superfamily | |
| PSPPH_2028 | 1 | 12 | 1.689401 | acyl-CoA thioesterase | |
| PSPPH_2029 | 1 | 12 | 0.953599 | hypothetical protein | |
| PSPPH_2030 | 2 | 12 | 2.427166 | methyl-accepting chemotaxis protein | |
| PSPPH_2031 | 1 | 12 | 2.560419 | deoxyribonuclease TatD | |
| PSPPH_2032 | 2 | 12 | 2.326163 | Slt family transglycosylase | |
| PSPPH_2035 | 2 | 12 | 2.846375 | hypothetical protein | |
| PSPPH_2036 | 1 | 12 | 2.603755 | transcription elongation factor GreB | |
| PSPPH_2037 | 2 | 14 | 2.819249 | permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1981 | IGASERPTASE | 37 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2003 | PF06580 | 36 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2004 | HTHFIS | 90 | 9e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2011 | PF00577 | 783 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2021 | PREPILNPTASE | 30 | 0.049 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2022 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2024 | HTHFIS | 30 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2027 | TYPE3OMGPROT | 28 | 0.030 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| 27 | PSPPH_2221 | PSPPH_2230 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2221 | 1 | 10 | 3.828094 | precorrin-4 C(11)-methyltransferase | |
| PSPPH_2222 | 1 | 10 | 3.847728 | hypothetical protein | |
| PSPPH_2223 | 0 | 9 | 3.586394 | hypothetical protein | |
| PSPPH_2224 | 0 | 11 | 3.242469 | cobalamin synthesis protein/P47K family protein | |
| PSPPH_2225 | 1 | 12 | 3.556223 | cobaltochelatase subunit CobN | |
| PSPPH_2226 | 3 | 13 | 2.139860 | magnesium chelatase ATPase subunit I | |
| PSPPH_2227 | 3 | 15 | 0.998789 | hypothetical protein | |
| PSPPH_2228 | 3 | 13 | 1.037586 | hypothetical protein | |
| PSPPH_2229 | 2 | 14 | 1.071913 | Fis family transcriptional regulator | |
| PSPPH_2230 | 4 | 14 | 0.929832 | nicotinamide-nucleotide adenylyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2226 | HTHFIS | 36 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2229 | HTHFIS | 337 | e-114 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 28 | PSPPH_2278 | PSPPH_2283 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2278 | 2 | 23 | -3.860093 | ABC transporter binding protein-like protein | |
| PSPPH_2279 | 3 | 30 | -4.756626 | ABC transporter protein, ATP binding component | |
| PSPPH_2280 | 3 | 33 | -7.210821 | ABC transporter permease | |
| PSPPH_2281 | 4 | 41 | -8.947272 | hypothetical protein | |
| PSPPH_2282 | 3 | 39 | -8.034781 | Rhs family protein | |
| PSPPH_2283 | 0 | 19 | -3.062051 | hypothetical protein |
| 29 | PSPPH_2383 | PSPPH_2391 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2383 | 1 | 20 | -3.710935 | *lipoprotein | |
| PSPPH_2384 | 1 | 20 | -2.661053 | isochorismatase | |
| PSPPH_2385 | 2 | 22 | -2.337496 | oxidoreductase truncated | |
| PSPPH_2386 | 4 | 25 | -3.568051 | hypothetical protein | |
| PSPPH_2387 | 3 | 26 | -3.356403 | S-layer protein | |
| PSPPH_2388 | 2 | 25 | -3.456776 | hypothetical protein | |
| PSPPH_2389 | 0 | 34 | -5.059687 | hypothetical protein | |
| PSPPH_2390 | 0 | 33 | -4.371855 | hypothetical protein | |
| PSPPH_2391 | 0 | 31 | -3.073816 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2384 | ISCHRISMTASE | 90 | 3e-23 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 30 | PSPPH_2479 | PSPPH_2485 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2479 | 0 | 24 | -3.173144 | UDP-glucose 4-epimerase | |
| PSPPH_2480 | 1 | 29 | -4.822462 | hypothetical protein | |
| PSPPH_2481 | 2 | 27 | -4.725870 | UDP-galactopyranose mutase | |
| PSPPH_2482 | 1 | 26 | -4.277334 | hypothetical protein | |
| PSPPH_2483 | 0 | 23 | -4.041333 | histidine kinase | |
| PSPPH_2484 | 0 | 25 | -3.943619 | ISPsy19, transposase | |
| PSPPH_2485 | 0 | 19 | -3.646307 | HypX |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2479 | NUCEPIMERASE | 163 | 6e-50 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2483 | HTHFIS | 74 | 4e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 31 | PSPPH_2784 | PSPPH_2820 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2784 | 1 | 25 | -3.424720 | dipeptide transport system permease DppC | |
| PSPPH_2785 | 1 | 29 | -4.602578 | ABC transporter inner membrane protein | |
| PSPPH_2786 | 3 | 40 | -6.824368 | ABC transporter substrate-binding protein | |
| PSPPH_2787 | 6 | 55 | -9.063131 | dipeptide/oligopeptide/nickel ABC transporter | |
| PSPPH_2788 | 4 | 52 | -8.925467 | zona occludens toxin | |
| PSPPH_2789 | 3 | 50 | -9.912335 | hypothetical protein | |
| PSPPH_2790 | 2 | 44 | -9.447381 | prophage PSPPH05, helix-destabilizing protein | |
| PSPPH_2791 | 2 | 43 | -9.001813 | hypothetical protein | |
| PSPPH_2792 | 1 | 39 | -7.723290 | prophage PSPPH05, DNA-binding protein | |
| PSPPH_2793 | 1 | 34 | -6.736236 | prophage PSPPH05, site-specific recombinase | |
| PSPPH_2795 | 2 | 35 | -7.190135 | hypothetical protein | |
| PSPPH_2796 | 1 | 29 | -3.660351 | hypothetical protein | |
| PSPPH_2797 | 1 | 27 | -3.235546 | ISPsy24, transposase orfA | |
| PSPPH_2798 | -1 | 24 | -3.105297 | ISPsy24, transposase orfB | |
| PSPPH_2799 | -1 | 18 | -2.671033 | ISPsy18, transposase | |
| PSPPH_2800 | -2 | 18 | -2.177809 | PbsX family transcriptional regulator | |
| PSPPH_2801 | -1 | 15 | -1.702367 | hypothetical protein | |
| PSPPH_2802 | -1 | 12 | -0.610876 | aminotransferase | |
| PSPPH_2803 | -1 | 11 | -0.700708 | glycosyl transferase ArnC | |
| PSPPH_2804 | -1 | 11 | -0.588553 | bifunctional UDP-glucuronic acid | |
| PSPPH_2805 | 2 | 13 | -1.008056 | polysaccharide deacetylase | |
| PSPPH_2806 | 1 | 15 | -1.614455 | 4-amino-4-deoxy-L-arabinose transferase | |
| PSPPH_2807 | 0 | 18 | -2.454090 | hypothetical protein | |
| PSPPH_2808 | 0 | 19 | -2.703826 | hypothetical protein | |
| PSPPH_2809 | -1 | 18 | -2.833672 | UDP-glucose 6-dehydrogenase | |
| PSPPH_2810 | 0 | 23 | -3.350137 | dolichyl-phosphate-mannose-protein | |
| PSPPH_2811 | -2 | 21 | -2.975460 | hypothetical protein | |
| PSPPH_2812 | -2 | 24 | -3.290919 | PAP2 superfamily protein | |
| PSPPH_2813 | 0 | 34 | -4.863403 | hypothetical protein | |
| PSPPH_2814 | 0 | 40 | -6.272794 | ISPsy2, transposase truncated | |
| PSPPH_2815 | 1 | 44 | -6.775347 | ISPsy19, transposase | |
| PSPPH_2817 | 2 | 40 | -6.661408 | phosphoesterase | |
| PSPPH_2818 | 0 | 27 | -5.364124 | acetyltransferase | |
| PSPPH_2819 | 1 | 23 | -5.326198 | Rhs family protein | |
| PSPPH_2820 | 0 | 13 | -3.326166 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2789 | cloacin | 57 | 7e-11 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2800 | LIPOLPP20 | 26 | 0.011 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2802 | TYPE3OMGPROT | 29 | 0.008 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2804 | NUCEPIMERASE | 103 | 3e-26 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2813 | IGASERPTASE | 36 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2818 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 32 | PSPPH_2893 | PSPPH_2901 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2893 | 2 | 11 | 2.768463 | AraC family transcriptional regulator | |
| PSPPH_2894 | 2 | 11 | 3.276086 | TonB-dependent siderophore receptor | |
| PSPPH_2895 | 3 | 11 | 3.506033 | ABC transporter ATP-binding protein/permease | |
| PSPPH_2896 | 3 | 12 | 3.653301 | ABC transporter ATP-binding protein/permease | |
| PSPPH_2897 | 3 | 12 | 3.794160 | yersiniabactin non-ribosomal peptide synthetase | |
| PSPPH_2898 | 3 | 12 | 3.908128 | hypothetical protein | |
| PSPPH_2899 | 2 | 13 | 3.782375 | yersiniabactin polyketide/non-ribosomal peptide | |
| PSPPH_2900 | 2 | 15 | 3.567040 | yersiniabactin synthetase, thiazolinyl reductase | |
| PSPPH_2901 | 0 | 13 | 3.645987 | yersiniabactin synthetase, thioesterase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2897 | ISCHRISMTASE | 50 | 6e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 33 | PSPPH_2919 | PSPPH_2932 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2919 | 0 | 16 | -3.176892 | carbonic anhydrase | |
| PSPPH_2920 | 1 | 20 | -4.856012 | GTP cyclohydrolase | |
| PSPPH_2921 | 0 | 14 | -2.542268 | LysR family transcriptional regulator | |
| PSPPH_2922 | 2 | 16 | -2.132825 | peptide ABC transporter substrate-binding | |
| PSPPH_2924 | 1 | 17 | -1.499395 | hypothetical protein | |
| PSPPH_2925 | 0 | 13 | 0.917297 | lytic transglycosylase | |
| PSPPH_2926 | 1 | 14 | 2.390165 | hypothetical protein | |
| PSPPH_2927 | 2 | 15 | 3.738755 | quinate/shikimate dehydrogenase | |
| PSPPH_2928 | 2 | 17 | 3.153820 | carbon-phosphorus lyase complex accessory | |
| PSPPH_2929 | 1 | 16 | 2.898744 | phosphonate metabolism protein PhnN | |
| PSPPH_2930 | 1 | 15 | 2.696285 | phosphonate metabolism protein PhnM | |
| PSPPH_2931 | -1 | 14 | 2.987510 | phosphonate metabolism protein PhnL | |
| PSPPH_2932 | 0 | 15 | 3.116886 | phosphonate C-P lyase system protein PhnK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2931 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 34 | PSPPH_3046 | PSPPH_3057 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3046 | -2 | 16 | -3.264322 | 2-pyrone-4,6-dicarboxylate lactonase | |
| PSPPH_3047 | -1 | 16 | -3.105373 | major facilitator family transporter | |
| PSPPH_3048 | -1 | 15 | -1.963131 | GntR family transcriptional regulator | |
| PSPPH_3049 | -1 | 14 | -1.408530 | hypothetical protein | |
| PSPPH_3050 | -1 | 12 | -0.251611 | ATP-binding protein | |
| PSPPH_3052 | 1 | 14 | 2.024036 | hypothetical protein | |
| PSPPH_3053 | 2 | 15 | 3.247363 | phospholipase/carboxylesterase | |
| PSPPH_3054 | 2 | 14 | 3.516508 | general secretion pathway protein GspD | |
| PSPPH_3055 | 4 | 15 | 4.044756 | general secretion pathway protein GspN | |
| PSPPH_3056 | 5 | 16 | 3.565549 | general secretion pathway protein GspM | |
| PSPPH_3057 | 3 | 13 | 3.116297 | general secretion pathway protein GspL |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3047 | TCRTETB | 41 | 5e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3053 | PF06057 | 30 | 0.006 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3054 | BCTERIALGSPD | 239 | 5e-71 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3055 | TRNSINTIMINR | 27 | 0.040 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| 35 | PSPPH_3116 | PSPPH_3138 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3116 | 2 | 21 | 0.310646 | NADH dehydrogenase subunit I | |
| PSPPH_3117 | 2 | 18 | 0.716944 | NADH dehydrogenase subunit J | |
| PSPPH_3118 | 2 | 17 | 0.284405 | NADH dehydrogenase subunit K | |
| PSPPH_3119 | 2 | 15 | 0.028070 | NADH dehydrogenase subunit L | |
| PSPPH_3120 | 1 | 13 | -0.265778 | NADH dehydrogenase subunit M | |
| PSPPH_3121 | 0 | 13 | -0.416471 | NADH dehydrogenase subunit N | |
| PSPPH_3122 | 0 | 17 | -0.791927 | transcriptional regulator | |
| PSPPH_3123 | 0 | 16 | -1.524038 | alpha/beta hydrolase | |
| PSPPH_3124 | 1 | 17 | -1.569369 | hypothetical protein | |
| PSPPH_3125 | 0 | 21 | -1.751250 | methyl-accepting chemotaxis protein | |
| PSPPH_3126 | 1 | 25 | -2.579503 | sensor histidine kinase | |
| PSPPH_3127 | 1 | 28 | -4.390842 | DNA-binding response regulator | |
| PSPPH_3128 | -1 | 24 | -3.536333 | peptidase propeptide/YPEB domain-containing | |
| PSPPH_3129 | -1 | 22 | -2.590865 | lipoprotein | |
| PSPPH_3130 | 0 | 17 | -2.399197 | 6-pyruvoyl tetrahydrobiopterin synthase | |
| PSPPH_3136 | 1 | 15 | -1.732927 | **cysteine transporter | |
| PSPPH_3137 | 2 | 11 | -1.199057 | hypothetical protein | |
| PSPPH_3138 | 2 | 12 | -0.759590 | peptidase, M24 family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3127 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3129 | THERMOLYSIN | 30 | 0.002 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| 36 | PSPPH_3201 | PSPPH_3207 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3201 | 2 | 15 | 0.629713 | beta-hexosaminidase | |
| PSPPH_3202 | 2 | 16 | -0.007710 | transcriptional regulator PsrA | |
| PSPPH_3203 | 2 | 14 | -0.285275 | LexA repressor | |
| PSPPH_3204 | 1 | 15 | -0.043688 | cell division inhibitor | |
| PSPPH_3205 | 2 | 17 | -0.495825 | hypothetical protein | |
| PSPPH_3206 | 2 | 17 | -0.394472 | hypothetical protein | |
| PSPPH_3207 | 2 | 16 | -0.333898 | DNA topoisomerase I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3202 | HTHTETR | 67 | 2e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 37 | PSPPH_3299 | PSPPH_3320 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3299 | 2 | 18 | 1.027813 | hypothetical protein | |
| PSPPH_3300 | 0 | 18 | 1.682611 | HlyD family secretion protein | |
| PSPPH_3301 | -1 | 17 | 2.371232 | NodT family outer membrane efflux lipoprotein | |
| PSPPH_3302 | -2 | 17 | 1.506347 | ribosomal protein alanine acetyltransferase | |
| PSPPH_3303 | -1 | 17 | 2.264646 | ion transport protein | |
| PSPPH_3304 | 0 | 15 | 3.061034 | sulfate ABC transporter substrate-binding | |
| PSPPH_3305 | 1 | 14 | 3.593748 | lipoprotein | |
| PSPPH_3306 | 1 | 15 | 3.181865 | cytochrome c-type biogenesis protein CycH | |
| PSPPH_3307 | 3 | 16 | 2.495680 | cytochrome c-type biogenesis protein CycL | |
| PSPPH_3308 | 4 | 18 | 2.814827 | thiol:disulfide interchange protein DsbE | |
| PSPPH_3309 | 5 | 18 | 3.195966 | cytochrome c-type biogenesis protein CcmF | |
| PSPPH_3310 | 6 | 17 | 3.412289 | cytochrome C biogenesis protein CcmE | |
| PSPPH_3311 | 6 | 18 | 3.616520 | heme exporter protein D | |
| PSPPH_3312 | 4 | 16 | 2.633291 | heme exporter protein CcmC | |
| PSPPH_3313 | 4 | 15 | 2.955032 | heme exporter protein CcmB | |
| PSPPH_3314 | 3 | 13 | 3.173478 | cytochrome c biogenesis protein CcmA | |
| PSPPH_3315 | 3 | 14 | 2.901850 | hypothetical protein | |
| PSPPH_3316 | 1 | 17 | 2.940520 | flagellar biosynthetic FlhB domain-containing | |
| PSPPH_3317 | 2 | 16 | 3.199998 | hypothetical protein | |
| PSPPH_3318 | 2 | 16 | 4.317887 | recombination protein RecR | |
| PSPPH_3320 | 1 | 15 | 3.686917 | alanine racemase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3300 | RTXTOXIND | 52 | 9e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3304 | OMPADOMAIN | 29 | 0.023 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3316 | TYPE3IMSPROT | 66 | 4e-16 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3320 | ALARACEMASE | 35 | 4e-04 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 38 | PSPPH_3329 | PSPPH_3337 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3329 | 2 | 19 | -3.400000 | ISPsy2, transposase | |
| PSPPH_3330 | 2 | 20 | -3.531412 | ISPsy18, transposase | |
| PSPPH_3331 | 2 | 20 | -3.067702 | hypothetical protein | |
| PSPPH_3332 | 2 | 15 | -2.252660 | outer membrane autotransporter | |
| PSPPH_3333 | 2 | 12 | -2.059588 | hypothetical protein | |
| PSPPH_3334 | 2 | 13 | -0.246588 | hypothetical protein | |
| PSPPH_3335 | 2 | 14 | 0.635516 | hypothetical protein | |
| PSPPH_3336 | 2 | 14 | -1.550428 | esterase | |
| PSPPH_3337 | 3 | 14 | -2.142675 | cbb3-type cytochrome c oxidase subunit I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3331 | IGASERPTASE | 31 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3332 | PRTACTNFAMLY | 264 | 2e-78 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3334 | INTIMIN | 46 | 3e-07 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 39 | PSPPH_3365 | PSPPH_3374 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3365 | 3 | 14 | -0.567584 | flagellar biosynthesis regulator FlhF | |
| PSPPH_3366 | 3 | 16 | -1.029031 | flagellar biosynthesis protein FlhA | |
| PSPPH_3367 | 6 | 20 | -0.709629 | flagellar biosynthesis protein FlhB | |
| PSPPH_3368 | 7 | 22 | -0.582004 | flagellar biosynthesis protein FliR | |
| PSPPH_3369 | 5 | 24 | -0.380686 | flagellar biosynthesis protein FliQ | |
| PSPPH_3370 | 4 | 17 | 0.556717 | flagellar biosynthesis protein FliP | |
| PSPPH_3371 | 3 | 17 | 0.394542 | flagellar protein FliO | |
| PSPPH_3372 | 2 | 16 | 0.079173 | flagellar motor switch protein | |
| PSPPH_3373 | 1 | 15 | -0.228778 | flagellar motor switch protein FliM | |
| PSPPH_3374 | 2 | 19 | -0.369354 | flagellar basal body protein FliL |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3367 | TYPE3IMSPROT | 316 | e-108 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3368 | TYPE3IMRPROT | 139 | 2e-42 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3369 | TYPE3IMQPROT | 49 | 1e-11 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3370 | FLGBIOSNFLIP | 261 | 2e-90 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3372 | FLGMOTORFLIN | 121 | 3e-38 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3373 | FLGMOTORFLIM | 250 | 9e-84 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| 40 | PSPPH_3387 | PSPPH_3412 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3387 | 2 | 17 | -2.066914 | flagellar regulator FleQ | |
| PSPPH_3388 | 1 | 19 | -3.106887 | motility-like protein FliT | |
| PSPPH_3389 | 0 | 13 | -1.282174 | flagellar protein FliS | |
| PSPPH_3390 | -1 | 10 | -0.789497 | flagellar hook-associated protein FliD | |
| PSPPH_3391 | -1 | 9 | -0.537751 | flagellin FlaG | |
| PSPPH_3392 | 0 | 10 | -0.187011 | flagellin | |
| PSPPH_3393 | 0 | 9 | 0.200337 | 3-oxoacyl-ACP synthase | |
| PSPPH_3394 | 0 | 11 | 0.624053 | glycosyl transferase family protein | |
| PSPPH_3395 | 0 | 11 | 0.365329 | glycosyl transferase family protein | |
| PSPPH_3396 | 3 | 15 | 0.451099 | flagellar hook-associated protein FlgL | |
| PSPPH_3397 | 2 | 18 | 0.635476 | flagellar hook-associated protein FlgK | |
| PSPPH_3398 | 2 | 18 | 0.521593 | flagellar rod assembly protein FlgJ | |
| PSPPH_3399 | 1 | 17 | 0.127126 | flagellar basal body P-ring biosynthesis protein | |
| PSPPH_3400 | 2 | 15 | -0.406059 | flagellar basal body L-ring protein | |
| PSPPH_3401 | 1 | 14 | -0.665681 | flagellar basal body rod protein FlgG | |
| PSPPH_3402 | 1 | 12 | -0.892461 | flagellar basal body rod protein FlgF | |
| PSPPH_3403 | 1 | 12 | -1.181749 | hypothetical protein | |
| PSPPH_3404 | 1 | 13 | -1.231882 | flagellar basal-body protein | |
| PSPPH_3405 | 2 | 14 | -1.913950 | flagellar hook protein FlgE | |
| PSPPH_3406 | -2 | 14 | -1.275538 | flagellar basal body rod modification protein | |
| PSPPH_3407 | -2 | 15 | -1.481666 | flagellar basal body rod protein FlgC | |
| PSPPH_3408 | -1 | 14 | -2.081606 | flagellar basal-body rod protein FlgB | |
| PSPPH_3409 | -1 | 13 | -1.856558 | hypothetical protein | |
| PSPPH_3410 | -1 | 14 | -2.225771 | cyanate hydratase | |
| PSPPH_3411 | -2 | 16 | -2.297817 | DNA-binding transcriptional regulator CynR | |
| PSPPH_3412 | -1 | 14 | -3.141847 | chemotaxis protein CheR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3387 | HTHFIS | 502 | e-178 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3392 | FLAGELLIN | 117 | 3e-32 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3396 | FLAGELLIN | 63 | 1e-12 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3397 | FLGHOOKAP1 | 194 | 2e-56 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3398 | FLGFLGJ | 127 | 1e-35 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3399 | FLGPRINGFLGI | 430 | e-153 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3400 | FLGLRINGFLGH | 173 | 3e-56 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3401 | FLGHOOKAP1 | 43 | 9e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3404 | FLGHOOKAP1 | 36 | 4e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3405 | FLGHOOKAP1 | 41 | 6e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3407 | FLGHOOKAP1 | 35 | 9e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 41 | PSPPH_3475 | PSPPH_3499 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3475 | -1 | 20 | -3.168222 | methyl-accepting chemotaxis protein | |
| PSPPH_3476 | -2 | 26 | -2.554172 | hypothetical protein | |
| PSPPH_3477 | -1 | 25 | -2.073172 | hypothetical protein | |
| PSPPH_3478 | 1 | 23 | -2.005018 | hypothetical protein | |
| PSPPH_3479 | 1 | 22 | -1.815407 | TetR family transcriptional regulator | |
| PSPPH_3480 | 1 | 20 | -1.404436 | hypothetical protein | |
| PSPPH_3481 | 1 | 20 | -1.246781 | short chain dehydrogenase/reductase | |
| PSPPH_3482 | 2 | 21 | -1.917945 | alpha/beta hydrolase | |
| PSPPH_3483 | 3 | 18 | -2.014293 | zinc-binding dehydrogenase oxidoreductase | |
| PSPPH_3484 | 0 | 14 | -0.476757 | short chain dehydrogenase | |
| PSPPH_3485 | 0 | 13 | -0.368186 | hypothetical protein | |
| PSPPH_3486 | 1 | 15 | -1.237473 | transcriptional regulator | |
| PSPPH_3487 | 1 | 16 | -1.553738 | transcriptional regulator | |
| PSPPH_3488 | 0 | 17 | -1.317546 | glutathione S-transferase | |
| PSPPH_3489 | -1 | 17 | -1.762131 | mechanosensitive ion channel protein MscS | |
| PSPPH_3490 | 0 | 25 | -3.463120 | hypothetical protein | |
| PSPPH_3491 | 0 | 29 | -4.281742 | HAD family hydrolase | |
| PSPPH_3492 | 0 | 30 | -4.775463 | ISPsy18, transposase, truncated | |
| PSPPH_3493 | 0 | 31 | -4.671006 | ISPsy16, transposase | |
| PSPPH_3495 | -1 | 32 | -5.599731 | diguanylate cyclase | |
| PSPPH_3497 | 3 | 45 | -8.425442 | transposase, truncated | |
| PSPPH_3498 | 3 | 47 | -8.854013 | type III effector HopF3 | |
| PSPPH_3499 | 2 | 23 | -4.491368 | type III chaperone protein ShcF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3479 | HTHTETR | 45 | 3e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3481 | DHBDHDRGNASE | 81 | 4e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3484 | DHBDHDRGNASE | 100 | 5e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3487 | HTHTETR | 58 | 1e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 42 | PSPPH_3561 | PSPPH_3580 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3561 | 0 | 16 | 3.016333 | hypothetical protein | |
| PSPPH_3562 | 1 | 16 | 3.829531 | hypothetical protein | |
| PSPPH_3563 | 2 | 17 | 4.126827 | MoxR-like protein | |
| PSPPH_3564 | 2 | 17 | 4.260281 | hypothetical protein | |
| PSPPH_3565 | 4 | 16 | 3.668895 | hypothetical protein | |
| PSPPH_3566 | 4 | 16 | 3.322643 | von Willebrand factor A | |
| PSPPH_3567 | 3 | 15 | 2.669262 | hypothetical protein | |
| PSPPH_3568 | 3 | 14 | 2.032307 | hypothetical protein | |
| PSPPH_3569 | 3 | 11 | 1.580656 | exonuclease SbcD | |
| PSPPH_3570 | 3 | 11 | 1.169342 | exonuclease SbcC | |
| PSPPH_3571 | 0 | 12 | 0.388020 | hypothetical protein | |
| PSPPH_3572 | 0 | 12 | 0.876690 | hypothetical protein | |
| PSPPH_3573 | 1 | 11 | 0.673363 | hypothetical protein | |
| PSPPH_3574 | 0 | 9 | 0.228956 | sugar transporter | |
| PSPPH_3575 | 1 | 12 | -0.562787 | major facilitator family transporter | |
| PSPPH_3576 | 0 | 11 | -1.254787 | dihydroxy-acid dehydratase | |
| PSPPH_3577 | -2 | 19 | -2.656855 | GntR family transcriptional regulator | |
| PSPPH_3578 | 1 | 25 | -4.145322 | hypothetical protein | |
| PSPPH_3579 | 2 | 26 | -4.008694 | ISPsy18, transposase | |
| PSPPH_3580 | 0 | 17 | -3.397077 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3563 | HTHFIS | 28 | 0.048 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3570 | GPOSANCHOR | 44 | 3e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3575 | TCRTETA | 30 | 0.020 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3576 | PHPHTRNFRASE | 29 | 0.047 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 43 | PSPPH_3654 | PSPPH_3667 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3654 | 1 | 22 | -3.308959 | TetR family transcriptional regulator | |
| PSPPH_3655 | 1 | 22 | -3.253129 | competence protein ComEA | |
| PSPPH_3656 | 1 | 22 | -3.092696 | nucleotide sugar epimerase/dehydratase WbpM | |
| PSPPH_3657 | 0 | 17 | -3.509466 | glycoside hydrolase family protein | |
| PSPPH_3658 | 1 | 16 | -2.952437 | UDP-glucose 4-epimerase | |
| PSPPH_3659 | 1 | 14 | -1.958109 | metallo-beta-lactamase | |
| PSPPH_3660 | 2 | 17 | -1.183330 | hypothetical protein | |
| PSPPH_3661 | 2 | 16 | -0.811474 | integration host factor subunit beta | |
| PSPPH_3662 | 1 | 19 | -0.285607 | 30S ribosomal protein S1 | |
| PSPPH_3663 | 1 | 13 | 1.034496 | cytidylate kinase | |
| PSPPH_3664 | 1 | 14 | 1.415466 | prephenate dehydrogenase/3-phosphoshikimate | |
| PSPPH_3665 | 2 | 18 | 1.517314 | chorismate mutase | |
| PSPPH_3666 | 2 | 19 | 1.989048 | phosphoserine aminotransferase | |
| PSPPH_3667 | 2 | 18 | 2.284465 | DNA gyrase subunit A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3654 | HTHTETR | 48 | 4e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3656 | NUCEPIMERASE | 70 | 4e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3658 | NUCEPIMERASE | 83 | 5e-20 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3661 | DNABINDINGHU | 114 | 3e-37 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3665 | adhesinmafb | 29 | 0.033 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 44 | PSPPH_3679 | PSPPH_3700 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3679 | 3 | 9 | 1.369120 | bolA protein | |
| PSPPH_3680 | 3 | 9 | 0.799903 | hypothetical protein | |
| PSPPH_3681 | 3 | 12 | 0.812841 | fumarate hydratase | |
| PSPPH_3682 | 3 | 15 | -0.335494 | oxidoreductase | |
| PSPPH_3683 | 2 | 16 | -1.118073 | hypothetical protein | |
| PSPPH_3684 | -1 | 12 | -1.477698 | hypothetical protein | |
| PSPPH_3685 | 0 | 13 | -2.031202 | hypothetical protein | |
| PSPPH_3686 | 0 | 14 | -1.203354 | DNA recombination protein rmuC-like protein | |
| PSPPH_3687 | 0 | 14 | -0.608664 | hypothetical protein | |
| PSPPH_3688 | 1 | 14 | 0.770065 | hypothetical protein | |
| PSPPH_3689 | 1 | 12 | 1.798793 | hypothetical protein | |
| PSPPH_3690 | 4 | 18 | 3.781536 | glutathione peroxidase | |
| PSPPH_3691 | 3 | 16 | 4.512559 | hypothetical protein | |
| PSPPH_3692 | 1 | 16 | 4.497338 | transporter | |
| PSPPH_3693 | 2 | 15 | 5.062934 | cobalamin synthase | |
| PSPPH_3694 | 2 | 15 | 5.114845 | alpha-ribazole-5'-phosphate phosphatase | |
| PSPPH_3695 | 1 | 14 | 5.152414 | nicotinate-nucleotide--dimethylbenzimidazole | |
| PSPPH_3696 | 0 | 14 | 4.869464 | adenosylcobinamide kinase | |
| PSPPH_3697 | 1 | 14 | 4.678174 | cobyric acid synthase | |
| PSPPH_3698 | 0 | 12 | 4.244918 | threonine-phosphate decarboxylase | |
| PSPPH_3699 | 0 | 12 | 3.938426 | cobalamin biosynthesis protein | |
| PSPPH_3700 | -1 | 12 | 3.222299 | cobalamin biosynthesis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3686 | GPOSANCHOR | 30 | 0.018 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3692 | TCRTETB | 43 | 1e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 45 | PSPPH_3738 | PSPPH_3777 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3738 | 2 | 17 | -3.528343 | ribonucleotide-diphosphate reductase subunit | |
| PSPPH_3739 | 6 | 36 | -6.738071 | ISPsy24, transposase orfB | |
| PSPPH_3740 | 6 | 26 | -5.917037 | ISPsy24, transposase orfA | |
| PSPPH_3741 | 7 | 34 | -9.156507 | phage integrase | |
| PSPPH_3742 | 5 | 35 | -8.795992 | hypothetical protein | |
| PSPPH_3743 | 4 | 34 | -8.838408 | hypothetical protein | |
| PSPPH_3744 | 2 | 29 | -8.102761 | transposition helper protein, truncated | |
| PSPPH_3745 | 1 | 29 | -7.666678 | ribonucleotide-diphosphate reductase subunit | |
| PSPPH_3746 | 0 | 37 | -9.028751 | hypothetical protein | |
| PSPPH_3747 | 0 | 26 | -5.697600 | ISPsy19, transposase | |
| PSPPH_3748 | 1 | 24 | -6.552198 | hypothetical protein | |
| PSPPH_3749 | 0 | 22 | -5.539985 | MupB | |
| PSPPH_3750 | 0 | 24 | -5.476432 | non-ribosomal peptide synthetase | |
| PSPPH_3751 | -1 | 24 | -6.097256 | glyoxalase | |
| PSPPH_3752 | 0 | 28 | -6.653417 | acetyltransferase | |
| PSPPH_3753 | 0 | 29 | -7.101855 | siderophore biosynthesis protein | |
| PSPPH_3754 | 0 | 34 | -7.838739 | diaminobutyrate--2-oxoglutarate | |
| PSPPH_3755 | 0 | 37 | -8.783242 | L-2,4-diaminobutyrate decarboxylase | |
| PSPPH_3756 | 2 | 35 | -8.620416 | hypothetical protein | |
| PSPPH_3757 | 1 | 32 | -7.249944 | hydrolase | |
| PSPPH_3758 | 2 | 29 | -5.681638 | riboflavin biosynthesis protein RibD | |
| PSPPH_3759 | 1 | 26 | -4.557289 | zinc-binding oxidoreductase | |
| PSPPH_3760 | 0 | 17 | -2.957140 | hypothetical protein | |
| PSPPH_3763 | 2 | 18 | -2.105852 | **exoenzyme S synthesis protein B | |
| PSPPH_3764 | 3 | 20 | -2.778274 | radical SAM domain-containing protein | |
| PSPPH_3765 | 2 | 20 | -2.508731 | hypothetical protein | |
| PSPPH_3766 | 3 | 19 | -2.735870 | peptidoglycan-associated lipoprotein | |
| PSPPH_3767 | 0 | 17 | -2.159700 | translocation protein TolB | |
| PSPPH_3768 | 1 | 19 | -1.841888 | tolA protein | |
| PSPPH_3769 | 1 | 20 | -0.474928 | tolR protein | |
| PSPPH_3770 | 2 | 19 | -0.271106 | tolQ protein | |
| PSPPH_3771 | 3 | 14 | 0.255299 | hypothetical protein | |
| PSPPH_3772 | 4 | 16 | -0.604062 | Holliday junction DNA helicase RuvB | |
| PSPPH_3773 | 3 | 16 | -1.635117 | Holliday junction DNA helicase RuvA | |
| PSPPH_3774 | 3 | 16 | -1.721553 | Holliday junction resolvase | |
| PSPPH_3775 | 3 | 16 | -2.439712 | hypothetical protein | |
| PSPPH_3776 | 2 | 16 | -3.136042 | aspartyl-tRNA synthetase | |
| PSPPH_3777 | 1 | 22 | -5.066134 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3744 | HTHFIS | 31 | 3e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3752 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3766 | OMPADOMAIN | 113 | 5e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3768 | IGASERPTASE | 62 | 2e-12 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3774 | OMS28PORIN | 28 | 0.018 | OMS28 porin signature. | |
>OMS28PORIN#OMS28 porin signature. | |||||
| 46 | PSPPH_3913 | PSPPH_3918 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3913 | 1 | 17 | -4.137032 | D-alanyl-alanine synthetase A | |
| PSPPH_3914 | 1 | 20 | -6.876029 | hypothetical protein | |
| PSPPH_3915 | 1 | 24 | -8.383701 | 50S ribosomal protein L31 | |
| PSPPH_3916 | 1 | 27 | -8.940114 | hypothetical protein | |
| PSPPH_3917 | 0 | 20 | -5.164948 | hypothetical protein | |
| PSPPH_3918 | 0 | 16 | -3.253879 | hypothetical protein |
| 47 | PSPPH_3979 | PSPPH_3992 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3979 | 2 | 23 | -4.612577 | hypothetical protein | |
| PSPPH_3980 | 2 | 27 | -6.393861 | ribosomal small subunit pseudouridine synthase | |
| PSPPH_3981 | 4 | 36 | -9.107708 | 3-hydroxyacyl-CoA-acyl carrier protein | |
| PSPPH_3983 | 6 | 47 | -11.275294 | *transcriptional regulator | |
| PSPPH_3985 | 6 | 48 | -11.896649 | 3-oxoacyl-ACP reductase | |
| PSPPH_3986 | 4 | 42 | -9.794094 | hypothetical protein | |
| PSPPH_3987 | 3 | 39 | -9.020126 | hypothetical protein | |
| PSPPH_3988 | 1 | 31 | -6.947494 | hypothetical protein | |
| PSPPH_3989 | -1 | 19 | -4.523173 | amino-acid binding protein | |
| PSPPH_3990 | -2 | 16 | -4.349078 | LysR family transcriptional regulator | |
| PSPPH_3992 | -1 | 15 | -3.315369 | pectin lyase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3983 | HTHTETR | 55 | 3e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3985 | DHBDHDRGNASE | 125 | 2e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 48 | PSPPH_4025 | PSPPH_4030 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4025 | 2 | 15 | 0.178704 | transcriptional regulator | |
| PSPPH_4026 | 2 | 14 | -0.206986 | exonuclease I | |
| PSPPH_4027 | 2 | 14 | 0.370096 | RDD domain-containing protein | |
| PSPPH_4028 | 3 | 15 | 0.124482 | hypothetical protein | |
| PSPPH_4029 | 2 | 16 | 0.257547 | hypothetical protein | |
| PSPPH_4030 | 2 | 17 | -0.844253 | hypothetical protein |
| 49 | PSPPH_4115 | PSPPH_4133 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4115 | 4 | 17 | 0.740083 | cell division protein FtsL | |
| PSPPH_4116 | 3 | 16 | 0.562074 | S-adenosyl-methyltransferase MraW | |
| PSPPH_4117 | 2 | 17 | 0.493045 | cell division protein MraZ | |
| PSPPH_4118 | 2 | 17 | 0.612822 | hypothetical protein | |
| PSPPH_4119 | 2 | 17 | 0.694242 | lipoprotein | |
| PSPPH_4120 | -1 | 17 | -2.116424 | hypothetical protein | |
| PSPPH_4121 | 1 | 17 | -2.326511 | phosphoheptose isomerase | |
| PSPPH_4122 | 2 | 15 | -1.677885 | lipoprotein | |
| PSPPH_4123 | 3 | 15 | -2.260745 | ClpXP protease specificity-enhancing factor | |
| PSPPH_4124 | 2 | 15 | -1.389800 | stringent starvation protein A | |
| PSPPH_4125 | 2 | 14 | -1.346873 | 30S ribosomal protein S9 | |
| PSPPH_4126 | 1 | 14 | -0.969902 | 50S ribosomal protein L13 | |
| PSPPH_4127 | 0 | 14 | -0.127561 | AraC family transcriptional regulator | |
| PSPPH_4128 | 1 | 17 | -0.410200 | ATPase | |
| PSPPH_4129 | 1 | 16 | 0.129320 | tryptophanyl-tRNA synthetase | |
| PSPPH_4130 | 2 | 15 | 0.103137 | esterase | |
| PSPPH_4131 | 1 | 17 | 0.449805 | hypothetical protein | |
| PSPPH_4132 | 2 | 15 | 0.652783 | bifunctional sulfate adenylyltransferase subunit | |
| PSPPH_4133 | 2 | 14 | 0.560355 | sulfate adenylyltransferase subunit 2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4132 | TCRTETOQM | 75 | 3e-16 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 50 | PSPPH_4211 | PSPPH_4234 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4211 | 1 | 21 | -3.591406 | hypothetical protein | |
| PSPPH_4212 | 3 | 30 | -7.691963 | oligoketide cyclase/lipid transport protein | |
| PSPPH_4213 | 4 | 37 | -9.772755 | sodium-dependent transporter | |
| PSPPH_4214 | 6 | 45 | -11.620898 | SsrA-binding protein | |
| PSPPH_4215 | 6 | 47 | -11.550513 | hypothetical protein | |
| PSPPH_4217 | 5 | 43 | -10.157587 | phage integrase site specific recombinase | |
| PSPPH_4218 | 6 | 43 | -10.411448 | hypothetical protein | |
| PSPPH_4219 | 5 | 39 | -8.490565 | DNA polymerase I | |
| PSPPH_4220 | 4 | 35 | -6.822530 | hypothetical protein | |
| PSPPH_4221 | 3 | 27 | -4.548862 | hypothetical protein | |
| PSPPH_4222 | 3 | 25 | -4.338160 | transposase, truncated | |
| PSPPH_4223 | 3 | 28 | -4.908194 | hypothetical protein | |
| PSPPH_4224 | 1 | 17 | -2.385288 | hypothetical protein | |
| PSPPH_4225 | 1 | 17 | -1.640921 | hypothetical protein | |
| PSPPH_4226 | 1 | 15 | -0.814966 | tail tape meausure protein, truncated | |
| PSPPH_4227 | 0 | 13 | 0.000847 | ISPsy18, transposase | |
| PSPPH_4228 | -1 | 13 | 1.022530 | acetyltransferase | |
| PSPPH_4229 | -1 | 12 | 1.873466 | catalase/peroxidase HPI | |
| PSPPH_4230 | -1 | 12 | 2.183103 | methyl-accepting chemotaxis protein | |
| PSPPH_4231 | 3 | 15 | 2.674239 | hypothetical protein | |
| PSPPH_4232 | 3 | 14 | 2.437436 | pH-dependent sodium/proton antiporter | |
| PSPPH_4234 | 3 | 15 | 1.310371 | peptide ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4228 | SACTRNSFRASE | 35 | 7e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 51 | PSPPH_4288 | PSPPH_4319 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4288 | 2 | 11 | 0.327666 | ATP-dependent protease | |
| PSPPH_4289 | 1 | 10 | -1.081655 | hypothetical protein | |
| PSPPH_4290 | 0 | 9 | -1.581286 | hypothetical protein | |
| PSPPH_4291 | 1 | 17 | -2.866577 | lipoprotein | |
| PSPPH_4292 | 2 | 18 | -3.350500 | transcription elongation factor GreB | |
| PSPPH_4293 | 2 | 19 | -3.690222 | ABC transporter ATP-binding protein | |
| PSPPH_4294 | 3 | 31 | -5.761707 | phage integrase site specific recombinase | |
| PSPPH_4295 | 2 | 35 | -7.095420 | phage integrase site specific recombinase | |
| PSPPH_4296 | 4 | 37 | -8.124702 | hypothetical protein | |
| PSPPH_4297 | 2 | 48 | -11.397303 | hypothetical protein | |
| PSPPH_4298 | 3 | 44 | -10.880282 | ISPsy5, transposase truncated | |
| PSPPH_4299 | 3 | 44 | -10.961478 | hypothetical protein | |
| PSPPH_4300 | 3 | 39 | -7.798584 | hypothetical protein | |
| PSPPH_4301 | 3 | 32 | -5.357115 | adenylylsulfate kinase | |
| PSPPH_4302 | 2 | 27 | -3.959739 | hypothetical protein | |
| PSPPH_4303 | 2 | 24 | -2.676132 | L-arginine:lysine amidinotransferase | |
| PSPPH_4304 | 2 | 25 | -2.251826 | HAD superfamily hydrolase | |
| PSPPH_4305 | 2 | 27 | -2.834926 | hypothetical protein | |
| PSPPH_4306 | 2 | 27 | -3.575506 | hypothetical protein | |
| PSPPH_4307 | 2 | 30 | -4.191634 | pyruvate phosphate dikinase PEP/pyruvate binding | |
| PSPPH_4308 | 3 | 30 | -4.972460 | deoxycytidine triphosphate deaminase | |
| PSPPH_4309 | 2 | 28 | -3.826921 | deoxycytidine triphosphate deaminase | |
| PSPPH_4310 | 0 | 27 | -3.352658 | fatty acid desaturase | |
| PSPPH_4311 | 0 | 27 | -3.566410 | fatty acid desaturase | |
| PSPPH_4312 | 1 | 30 | -5.210930 | hypothetical protein | |
| PSPPH_4313 | 1 | 34 | -6.388260 | ornithine aminotransferase | |
| PSPPH_4314 | 1 | 35 | -7.889693 | hypothetical protein | |
| PSPPH_4315 | 2 | 35 | -7.698457 | hypothetical protein | |
| PSPPH_4316 | 2 | 36 | -7.925884 | hypothetical protein | |
| PSPPH_4317 | 3 | 34 | -7.153333 | hypothetical protein | |
| PSPPH_4318 | 2 | 35 | -6.997974 | hypothetical protein | |
| PSPPH_4319 | 2 | 32 | -5.616259 | phaseolotoxin-insensitive ornithine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4300 | TCRTETB | 32 | 0.003 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4311 | NUCEPIMERASE | 30 | 0.015 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4314 | SECBCHAPRONE | 29 | 0.009 | Bacterial protein-transport SecB chaperone protein ... | |
>SECBCHAPRONE#Bacterial protein-transport SecB chaperone protein | |||||
| 52 | PSPPH_4425 | PSPPH_4437 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4425 | -1 | 12 | 3.151079 | Rhs element Vgr protein | |
| PSPPH_4426 | -1 | 12 | 3.222584 | esterase | |
| PSPPH_4427 | -1 | 12 | 3.053686 | DNA-damage-inducible protein F | |
| PSPPH_4428 | 0 | 12 | 3.075247 | lipoprotein | |
| PSPPH_4429 | -1 | 14 | 2.730686 | hypothetical protein | |
| PSPPH_4430 | -1 | 14 | 3.136508 | penicillin-binding protein 1C | |
| PSPPH_4431 | -2 | 13 | 1.474357 | response regulator | |
| PSPPH_4432 | -1 | 13 | 1.583432 | pilin protein | |
| PSPPH_4433 | -1 | 14 | 1.698163 | CpaB family Flp pilus assembly protein | |
| PSPPH_4434 | 0 | 16 | 1.230705 | type II/III secretion system protein | |
| PSPPH_4435 | 2 | 17 | 1.436685 | hypothetical protein | |
| PSPPH_4436 | 1 | 16 | 0.956004 | general secretion pathway/type 4 pilus assembly | |
| PSPPH_4437 | 2 | 18 | 0.492156 | type II secretion system protein F domain |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4431 | HTHFIS | 83 | 9e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4434 | BCTERIALGSPD | 144 | 5e-40 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4435 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 53 | PSPPH_4457 | PSPPH_4462 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4457 | 1 | 9 | 4.120529 | CbiG protein/precorrin-3B C17-methyltransferase | |
| PSPPH_4458 | 2 | 12 | 4.064397 | precorrin-2 C(20)-methyltransferase | |
| PSPPH_4459 | 2 | 12 | 3.382853 | precorrin-8X methylmutase | |
| PSPPH_4460 | 2 | 12 | 3.244892 | precorrin-3B synthase | |
| PSPPH_4461 | 2 | 12 | 2.581265 | precorrin-6Y C5,15-methyltransferase | |
| PSPPH_4462 | 2 | 14 | 1.201973 | cobalt-precorrin-6A synthase |
| 54 | PSPPH_4486 | PSPPH_4510 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4486 | -1 | 16 | -3.112756 | phosphate starvation-inducible protein PsiF | |
| PSPPH_4487 | -1 | 17 | -2.979402 | hypothetical protein | |
| PSPPH_4488 | 0 | 18 | -3.420080 | hypothetical protein | |
| PSPPH_4489 | -1 | 12 | -1.728472 | DNA-binding transcriptional activator OsmE | |
| PSPPH_4490 | -1 | 13 | -1.266272 | hypothetical protein | |
| PSPPH_4491 | -1 | 12 | -0.919463 | hypothetical protein | |
| PSPPH_4492 | -1 | 12 | 0.305302 | ISPsy18, transposase | |
| PSPPH_4493 | 0 | 13 | 1.157662 | bacterioferritin | |
| PSPPH_4494 | 1 | 13 | 1.857511 | AsmA family protein | |
| PSPPH_4495 | 4 | 17 | 2.467573 | TetR family transcriptional regulator | |
| PSPPH_4496 | 3 | 16 | 2.402532 | urease accessory protein UreE | |
| PSPPH_4497 | 4 | 12 | 3.482651 | urease accessory protein UreF | |
| PSPPH_4498 | 1 | 10 | 3.089090 | urease accessory protein UreG | |
| PSPPH_4499 | 1 | 11 | 3.321719 | urease accessory protein | |
| PSPPH_4500 | -1 | 12 | 2.427663 | hypothetical protein | |
| PSPPH_4501 | -1 | 16 | 2.402291 | GTP cyclohydrolase II | |
| PSPPH_4502 | -1 | 17 | 3.570982 | thiamine monophosphate kinase | |
| PSPPH_4503 | 1 | 21 | 2.664916 | transcription antitermination protein NusB | |
| PSPPH_4504 | 0 | 18 | 3.144120 | 6,7-dimethyl-8-ribityllumazine synthase | |
| PSPPH_4505 | -1 | 16 | 3.306937 | bifunctional 3,4-dihydroxy-2-butanone | |
| PSPPH_4506 | 0 | 16 | 3.097896 | riboflavin synthase subunit alpha | |
| PSPPH_4507 | 1 | 15 | 3.292452 | riboflavin biosynthesis protein RibD | |
| PSPPH_4508 | 1 | 14 | 1.189117 | transcriptional regulator NrdR | |
| PSPPH_4509 | 1 | 16 | 0.718560 | lipoprotein | |
| PSPPH_4510 | 2 | 15 | 0.512378 | 50S ribosomal protein L11 methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4493 | HELNAPAPROT | 41 | 3e-07 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4495 | HTHTETR | 55 | 1e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4509 | PERTACTIN | 29 | 0.009 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| 55 | PSPPH_4623 | PSPPH_4631 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4623 | 1 | 14 | 3.441069 | thymidylate synthase | |
| PSPPH_4624 | 0 | 15 | 3.084732 | ABC transporter ATP-binding protein | |
| PSPPH_4625 | 1 | 14 | 3.250041 | ABC transporter permease | |
| PSPPH_4626 | 0 | 14 | 3.941362 | ABC transporter permease | |
| PSPPH_4627 | 0 | 13 | 3.818645 | short chain dehydrogenase | |
| PSPPH_4628 | 1 | 15 | 4.147132 | hydroxydechloroatrazine ethylaminohydrolase | |
| PSPPH_4629 | 0 | 14 | 3.231457 | cpaA protein | |
| PSPPH_4630 | 0 | 16 | 3.755291 | iron-dicitrate transporter substrate-binding | |
| PSPPH_4631 | -1 | 17 | 3.100430 | iron-dicitrate transporter permease subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4626 | BCTERIALGSPD | 29 | 0.029 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4627 | DHBDHDRGNASE | 47 | 1e-08 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4630 | FERRIBNDNGPP | 72 | 1e-16 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 56 | PSPPH_4672 | PSPPH_4690 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4672 | 0 | 16 | -4.231142 | inorganic pyrophosphatase | |
| PSPPH_4673 | -1 | 19 | -4.398987 | Cro/CI family transcriptional regulator | |
| PSPPH_4674 | -1 | 21 | -5.097399 | DNA-binding protein | |
| PSPPH_4675 | -1 | 19 | -5.337014 | WavE lipopolysaccharide synthesis superfamily | |
| PSPPH_4676 | -1 | 19 | -5.644373 | hypothetical protein | |
| PSPPH_4677 | -1 | 18 | -5.190442 | hypothetical protein | |
| PSPPH_4678 | -1 | 18 | -5.144421 | hypothetical protein | |
| PSPPH_4679 | 0 | 19 | -5.327598 | hypothetical protein | |
| PSPPH_4680 | -2 | 23 | -4.794028 | HAD superfamily hydrolase | |
| PSPPH_4681 | -1 | 32 | -7.230503 | hypothetical protein | |
| PSPPH_4682 | 0 | 30 | -6.649924 | lipopolysaccharide biosynthesis protein | |
| PSPPH_4683 | 0 | 27 | -6.040643 | O-antigen ABC transporter ATP-binding protein | |
| PSPPH_4684 | 1 | 26 | -5.128301 | O-antigen ABC transporter permease | |
| PSPPH_4685 | 1 | 25 | -4.179840 | ISPsy19, transposase | |
| PSPPH_4686 | 1 | 22 | -4.172583 | ATP/GTP-binding protein | |
| PSPPH_4689 | 1 | 16 | -0.570730 | **ISPsy18, transposase, truncated | |
| PSPPH_4690 | 2 | 19 | -0.085717 | formate transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4672 | 56KDTSANTIGN | 28 | 0.021 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| 57 | PSPPH_4941 | PSPPH_4995 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4941 | 2 | 15 | 1.780908 | amino acid ABC transporter permease | |
| PSPPH_4942 | 2 | 20 | 1.009933 | hypothetical protein | |
| PSPPH_4943 | 0 | 28 | 0.098265 | hypothetical protein | |
| PSPPH_4944 | 1 | 25 | 1.352477 | DnaJ domain-containing protein | |
| PSPPH_4946 | 3 | 21 | 1.199199 | *hypothetical protein | |
| PSPPH_4947 | 3 | 17 | 1.301417 | hypothetical protein | |
| PSPPH_4948 | 2 | 15 | 1.699204 | hypothetical protein | |
| PSPPH_4950 | 2 | 14 | 2.246053 | hypothetical protein | |
| PSPPH_4951 | 2 | 15 | 2.111125 | hypothetical protein | |
| PSPPH_4952 | 2 | 15 | 2.310361 | prophage PSPPH06 tail fiber protein | |
| PSPPH_4953 | 2 | 16 | 2.322287 | prophage PSPPH06 tail fiber protein | |
| PSPPH_4954 | 2 | 21 | 2.885301 | hypothetical protein | |
| PSPPH_4955 | 1 | 20 | 2.944456 | hypothetical protein | |
| PSPPH_4956 | 2 | 21 | 3.209010 | hypothetical protein | |
| PSPPH_4957 | 3 | 20 | 3.513210 | prophage PSPPH06, TP901 family tail tape measure | |
| PSPPH_4958 | 1 | 23 | 2.779415 | hypothetical protein | |
| PSPPH_4959 | 0 | 22 | 3.650052 | hypothetical protein | |
| PSPPH_4960 | 0 | 21 | 4.047812 | prophage PSPPH06, lysis protein | |
| PSPPH_4961 | 1 | 23 | 4.008147 | prophage PSPPH06 lysozyme | |
| PSPPH_4962 | 1 | 24 | 3.545271 | prophage PSPPH06, DksA/TraR family C4-type zinc | |
| PSPPH_4963 | 2 | 24 | 2.361762 | prophage PSPPH06 tail tube protein | |
| PSPPH_4964 | 2 | 22 | 2.389883 | prophage PSPPH06 tail sheath protein | |
| PSPPH_4965 | 3 | 20 | 0.837192 | prophage PSPPH06, virion morphogenesis protein | |
| PSPPH_4966 | 2 | 20 | 0.325185 | prophage PSPPH06 tail protein | |
| PSPPH_4967 | -1 | 15 | 0.345371 | prophage PSPPH06 head completion/stabilization | |
| PSPPH_4969 | -1 | 14 | -1.066203 | prophage PSPPH06, major capsid protein P2 | |
| PSPPH_4970 | -1 | 18 | -1.767510 | prophage PSPPH06 terminase ATPase subunit | |
| PSPPH_4971 | 0 | 25 | -3.542084 | hypothetical protein | |
| PSPPH_4972 | 2 | 31 | -4.494141 | hypothetical protein | |
| PSPPH_4973 | 3 | 35 | -5.826779 | prophage PSPPH06, site-specific recombinase | |
| PSPPH_4974 | 6 | 47 | -10.090538 | hypothetical protein | |
| PSPPH_4975 | 6 | 48 | -10.180500 | hypothetical protein | |
| PSPPH_4976 | 6 | 50 | -10.674229 | hypothetical protein | |
| PSPPH_4977 | 5 | 42 | -9.278327 | prophage PSPPH06, GNAT family acetyltransferase | |
| PSPPH_4978 | 6 | 38 | -6.370654 | prophage PSPPH06 reverse transcriptase/maturase | |
| PSPPH_4979 | 4 | 31 | -4.270680 | prophage PSPPH06 reverse transcriptase/maturase | |
| PSPPH_4980 | 3 | 25 | -1.743731 | hypothetical protein | |
| PSPPH_4981 | 3 | 25 | -2.181177 | hypothetical protein | |
| PSPPH_4982 | 3 | 22 | -0.648172 | prophage PSPPH06 adenine modification | |
| PSPPH_4983 | 3 | 24 | -1.015788 | prophage PSPPH06 tail tape meausure | |
| PSPPH_4984 | 1 | 27 | -3.343920 | prophage PSPPH06, site-specific recombinase | |
| PSPPH_4985 | 1 | 28 | -4.851726 | hypothetical protein | |
| PSPPH_4986 | 3 | 33 | -6.222434 | hypothetical protein | |
| PSPPH_4987 | 1 | 27 | -4.641892 | hypothetical protein | |
| PSPPH_4988 | 3 | 28 | -4.582656 | ISPsy24, transposase orfB | |
| PSPPH_4989 | 4 | 24 | -4.194003 | ISPsy19, transposase truncated | |
| PSPPH_4990 | 3 | 24 | -5.537796 | ISPsy2, transposase | |
| PSPPH_4991 | 3 | 32 | -7.061539 | glycosyl hydrolase | |
| PSPPH_4992 | 3 | 25 | -4.748014 | hypothetical protein | |
| PSPPH_4993 | 2 | 28 | -4.942808 | hypothetical protein | |
| PSPPH_4994 | 1 | 24 | -4.730024 | levansucrase LscC | |
| PSPPH_4995 | 1 | 26 | -5.338388 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4957 | TONBPROTEIN | 32 | 0.008 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4983 | PF07132 | 30 | 0.022 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4991 | PF03309 | 27 | 0.036 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| 58 | PSPPH_5018 | PSPPH_5033 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_5018 | 2 | 14 | -4.067073 | ribosomal protein S6 modification protein | |
| PSPPH_5019 | 2 | 13 | -4.155041 | diguanylate phosphodiesterase | |
| PSPPH_5020 | 2 | 17 | -5.090572 | heat shock protein 15 | |
| PSPPH_5021 | 1 | 17 | -4.460780 | heat shock protein 33 | |
| PSPPH_5022 | 2 | 19 | -4.661250 | phosphoenolpyruvate carboxykinase | |
| PSPPH_5023 | 2 | 23 | -6.247281 | hypothetical protein | |
| PSPPH_5024 | -1 | 13 | -0.352572 | acetyltransferase | |
| PSPPH_5025 | 0 | 14 | 0.124425 | hypothetical protein | |
| PSPPH_5026 | 1 | 18 | 2.027821 | hypothetical protein | |
| PSPPH_5027 | 1 | 20 | 2.590530 | acetyltransferase | |
| PSPPH_5028 | 1 | 22 | 2.822251 | haloacid dehalogenase | |
| PSPPH_5030 | 2 | 20 | 3.536949 | peptide ABC transporter substrate-binding | |
| PSPPH_5031 | 1 | 18 | 3.450134 | peptide ABC transporter permease | |
| PSPPH_5032 | 0 | 18 | 3.521192 | peptide ABC transporter permease | |
| PSPPH_5033 | 0 | 16 | 3.209409 | peptide ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5024 | SACTRNSFRASE | 45 | 3e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5027 | SACTRNSFRASE | 36 | 8e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5031 | ACRIFLAVINRP | 30 | 0.011 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 59 | PSPPH_5047 | PSPPH_5072 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_5047 | 2 | 15 | 1.952129 | peptide ABC transporter permease | |
| PSPPH_5048 | 1 | 14 | 2.219133 | solute-binding family 5 protein | |
| PSPPH_5049 | 0 | 15 | 2.448488 | TonB system transport protein | |
| PSPPH_5050 | -2 | 11 | 2.712759 | biopolymer transport protein ExbD | |
| PSPPH_5051 | -2 | 9 | 1.604514 | biopolymer transport protein ExbB | |
| PSPPH_5052 | 0 | 13 | 0.157817 | ferric siderophore ABC transporter | |
| PSPPH_5053 | -1 | 12 | -1.149724 | class V aminotransferase | |
| PSPPH_5054 | 1 | 20 | -3.368781 | AsnC family transcriptional regulator | |
| PSPPH_5055 | 3 | 23 | -4.450029 | hypothetical protein | |
| PSPPH_5056 | 1 | 18 | -2.662269 | hypothetical protein | |
| PSPPH_5057 | 0 | 17 | -2.077456 | DNA-binding protein | |
| PSPPH_5058 | -1 | 13 | -1.093733 | HAD family hydrolase | |
| PSPPH_5059 | -1 | 15 | -1.225951 | hypothetical protein | |
| PSPPH_5060 | -2 | 15 | -1.030160 | H-NS | |
| PSPPH_5061 | -1 | 17 | -1.622236 | poly(beta-D-mannuronate) C5 epimerase 3 | |
| PSPPH_5062 | 1 | 24 | -3.469083 | ISPsy18, transposase, truncated | |
| PSPPH_5063 | 4 | 27 | -4.744549 | hypothetical protein | |
| PSPPH_5064 | 3 | 24 | -6.244914 | hypothetical protein | |
| PSPPH_5065 | 3 | 26 | -6.228991 | hypothetical protein | |
| PSPPH_5066 | 3 | 27 | -6.765028 | ADP-ribosylglycohydrolase | |
| PSPPH_5067 | 3 | 18 | -4.795407 | hypothetical protein | |
| PSPPH_5068 | 3 | 18 | -5.108632 | hypothetical protein | |
| PSPPH_5069 | 3 | 16 | -4.126694 | Rhs family protein | |
| PSPPH_5070 | 4 | 20 | -4.259418 | hypothetical protein | |
| PSPPH_5071 | 5 | 22 | -5.469348 | hypothetical protein | |
| PSPPH_5072 | 5 | 20 | -5.049235 | RHS family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5052 | PF03544 | 76 | 2e-18 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5055 | BCTERIALGSPH | 26 | 0.023 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5061 | CABNDNGRPT | 91 | 1e-21 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5069 | VACCYTOTOXIN | 30 | 0.029 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| 60 | PSPPH_0292 | PSPPH_0295 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0292 | 2 | 15 | -0.784631 | sn-glycerol-3-phosphate transporter | |
| PSPPH_0293 | 3 | 18 | -2.027844 | TonB domain-containing protein | |
| PSPPH_0294 | 4 | 18 | -2.810372 | hypothetical protein | |
| PSPPH_0295 | 5 | 18 | -3.287346 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0292 | TCRTETA | 29 | 0.032 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0293 | PF03544 | 48 | 5e-09 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0294 | PF03544 | 40 | 3e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0295 | PYOCINKILLER | 35 | 3e-04 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 61 | PSPPH_0390 | PSPPH_0397 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0390 | 0 | 13 | -0.217482 | type IV pilus assembly protein PilM | |
| PSPPH_0391 | -1 | 12 | -0.160344 | type IV pilus biogenesis protein PilN | |
| PSPPH_0392 | -3 | 12 | 0.767584 | type IV pilus biogenesis protein PilO | |
| PSPPH_0393 | -2 | 13 | 1.331979 | type IV pilus biogenesis protein PilP | |
| PSPPH_0394 | -3 | 14 | 1.299709 | type IV pilus biogenesis protein PilQ | |
| PSPPH_0395 | -2 | 17 | 1.769832 | shikimate kinase | |
| PSPPH_0396 | -2 | 13 | 1.056029 | 3-dehydroquinate synthase | |
| PSPPH_0397 | -1 | 10 | 0.267577 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0390 | SHAPEPROTEIN | 32 | 0.004 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0394 | BCTERIALGSPD | 276 | 2e-85 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0395 | PF05272 | 27 | 0.042 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0397 | PF03544 | 42 | 3e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 62 | PSPPH_0477 | PSPPH_0483 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0477 | 1 | 14 | -0.376836 | TonB domain-containing protein | |
| PSPPH_0478 | 0 | 13 | 1.645938 | glutathione synthetase | |
| PSPPH_0479 | 0 | 13 | 1.766902 | type IV pilus response regulator PilG | |
| PSPPH_0480 | -1 | 12 | 2.058850 | type IV pilus response regulator PilH | |
| PSPPH_0481 | 0 | 12 | 2.070168 | type IV pilus biogenesis protein PilI | |
| PSPPH_0482 | -1 | 12 | 2.262730 | type IV pilus biogenesis protein PilJ | |
| PSPPH_0483 | 0 | 12 | 2.935760 | sensor histidine kinase/response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0477 | PF03544 | 65 | 2e-14 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0478 | RTXTOXINC | 28 | 0.025 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0479 | HTHFIS | 69 | 6e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0480 | HTHFIS | 80 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0483 | HTHFIS | 69 | 1e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 63 | PSPPH_0725 | PSPPH_0736 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0725 | 3 | 28 | -4.828697 | type IV pilus biogenesis protein | |
| PSPPH_0726 | 4 | 28 | -4.831024 | type IV pilin | |
| PSPPH_0727 | 3 | 26 | -3.803742 | pre-pilin leader sequence | |
| PSPPH_0728 | 2 | 18 | -2.288021 | hypothetical protein | |
| PSPPH_0729 | 1 | 16 | -1.391168 | PilX protein | |
| PSPPH_0730 | 0 | 15 | -1.353240 | type IV pilus-associated protein | |
| PSPPH_0731 | -3 | 10 | 0.844813 | type IV pilus biogenesis protein | |
| PSPPH_0732 | -3 | 9 | 0.798026 | glycine oxidase ThiO | |
| PSPPH_0733 | -3 | 10 | 0.746036 | RND efflux transporter | |
| PSPPH_0734 | -2 | 10 | 0.613443 | RND family efflux transporter MFP subunit | |
| PSPPH_0735 | -1 | 10 | 0.444409 | TetR family transcriptional regulator | |
| PSPPH_0736 | -1 | 11 | 1.628488 | type IV fimbriae expression regulatory protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0725 | BCTERIALGSPH | 43 | 7e-08 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0726 | BCTERIALGSPG | 40 | 7e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0727 | BCTERIALGSPG | 29 | 0.008 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0728 | BCTERIALGSPH | 30 | 0.006 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0731 | BCTERIALGSPG | 49 | 3e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0733 | ACRIFLAVINRP | 430 | e-136 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0734 | RTXTOXIND | 39 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0735 | HTHTETR | 68 | 8e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0736 | HTHFIS | 507 | e-180 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 64 | PSPPH_0807 | PSPPH_0821 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0807 | 0 | 12 | 0.936966 | chemotaxis protein CheY | |
| PSPPH_0808 | -1 | 12 | 0.596870 | methyl-accepting chemotaxis protein | |
| PSPPH_0809 | -1 | 11 | 0.379672 | NADH dehydrogenase | |
| PSPPH_0810 | 3 | 24 | -4.153158 | MOSC domain-containing protein | |
| PSPPH_0811 | 3 | 25 | -4.305970 | hypothetical protein | |
| PSPPH_0812 | 3 | 24 | -4.290436 | outer membrane efflux protein | |
| PSPPH_0813 | 3 | 24 | -4.312985 | hypothetical protein | |
| PSPPH_0814 | 3 | 26 | -4.989797 | HlyD family type I secretion membrane fusion | |
| PSPPH_0815 | 4 | 27 | -5.487567 | calcium binding hemolysin protein | |
| PSPPH_0816 | 1 | 19 | -4.757290 | zinc-binding protein | |
| PSPPH_0817 | 1 | 17 | -4.534857 | dephospho-CoA kinase | |
| PSPPH_0818 | 0 | 21 | -4.768975 | type IV pilus prepilin peptidase PilD | |
| PSPPH_0819 | 0 | 22 | -5.426225 | type IV pilus biogenesis protein PilC | |
| PSPPH_0820 | 1 | 20 | -3.566385 | type IV pilus biogenesis protein PilB | |
| PSPPH_0821 | 1 | 20 | -1.444687 | type IV pilin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0807 | HTHFIS | 90 | 3e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0808 | RTXTOXIND | 32 | 0.005 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0813 | ACRIFLAVINRP | 30 | 0.040 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0814 | RTXTOXIND | 357 | e-121 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0815 | RTXTOXINA | 134 | 5e-33 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0818 | PREPILNPTASE | 345 | e-122 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0819 | BCTERIALGSPF | 434 | e-153 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0821 | BCTERIALGSPG | 51 | 2e-11 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 65 | PSPPH_0827 | PSPPH_0836 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0827 | 1 | 14 | 0.986182 | serine protease | |
| PSPPH_0828 | 0 | 11 | 0.443627 | hypothetical protein | |
| PSPPH_0829 | 0 | 11 | 0.098530 | hypothetical protein | |
| PSPPH_0830 | 0 | 13 | -0.580921 | hypothetical protein | |
| PSPPH_0831 | 1 | 17 | -1.191411 | hypothetical protein | |
| PSPPH_0832 | 2 | 19 | -1.252253 | HAD superfamily hydrolase | |
| PSPPH_0833 | 3 | 22 | -1.544071 | tellurium resistance protein TerZ | |
| PSPPH_0834 | 3 | 18 | -1.708351 | tellurium resistance protein TerA | |
| PSPPH_0835 | 3 | 18 | -1.868958 | tellurium resistance protein TerB | |
| PSPPH_0836 | 1 | 15 | -0.700106 | tellurium resistance protein TerC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0827 | V8PROTEASE | 65 | 7e-14 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0829 | MYCMG045 | 30 | 0.008 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0830 | SHIGARICIN | 29 | 0.027 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0834 | PF05616 | 33 | 0.002 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0836 | BCTERIALGSPG | 30 | 0.005 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 66 | PSPPH_0918 | PSPPH_0923 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0918 | 1 | 19 | -1.115918 | acetyltransferase | |
| PSPPH_0919 | 0 | 17 | -0.922232 | MltA domain-containing protein | |
| PSPPH_0920 | -1 | 16 | -0.641323 | S-type pyocin family protein | |
| PSPPH_0921 | 0 | 12 | 2.002468 | hypothetical protein | |
| PSPPH_0922 | -1 | 11 | 1.342987 | hypothetical protein | |
| PSPPH_0923 | -1 | 12 | 0.593211 | response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0918 | SACTRNSFRASE | 33 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0920 | PYOCINKILLER | 108 | 1e-26 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0922 | HTHFIS | 27 | 0.044 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0923 | HTHFIS | 78 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 67 | PSPPH_0937 | PSPPH_0944 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_0937 | -1 | 12 | -1.388498 | hypothetical protein | |
| PSPPH_0938 | -1 | 16 | -2.258648 | OprD family outer membrane porin | |
| PSPPH_0939 | 0 | 18 | -2.635739 | short chain dehydrogenase/reductase | |
| PSPPH_0940 | 1 | 20 | -2.543613 | methyl-accepting chemotaxis protein | |
| PSPPH_0942 | 3 | 27 | -3.117840 | hypothetical protein | |
| PSPPH_0943 | 3 | 22 | -3.185736 | circadian oscillation regulator KaiC-like | |
| PSPPH_0944 | 1 | 15 | -1.606989 | histidine kinase-response regulator hybrid |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0937 | NUCEPIMERASE | 73 | 8e-17 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0938 | VACCYTOTOXIN | 33 | 0.002 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0939 | DHBDHDRGNASE | 129 | 9e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_0944 | HTHFIS | 73 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 68 | PSPPH_1195 | PSPPH_1201 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1195 | -1 | 9 | 0.664388 | DNA-binding heavy metal response regulator | |
| PSPPH_1196 | -1 | 10 | 0.396075 | RND efflux transporter | |
| PSPPH_1197 | 0 | 16 | -1.097150 | HlyD family secretion protein | |
| PSPPH_1198 | 0 | 19 | -1.568039 | hypothetical protein | |
| PSPPH_1199 | 0 | 17 | -1.217558 | fimbrial protein | |
| PSPPH_1200 | 0 | 17 | -0.963761 | pili assembly chaperone | |
| PSPPH_1201 | 0 | 14 | -0.333273 | Outer membrane usher protein fimD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1195 | HTHFIS | 81 | 7e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1196 | ACRIFLAVINRP | 748 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1197 | RTXTOXIND | 54 | 4e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1201 | PF00577 | 721 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 69 | PSPPH_1258 | PSPPH_1287 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1258 | -2 | 17 | -0.715588 | 3-oxoacyl-ACP reductase | |
| PSPPH_1259 | -1 | 19 | -1.183127 | transcriptional regulator | |
| PSPPH_1260 | 0 | 15 | -1.505707 | short chain dehydrogenase/reductase | |
| PSPPH_1261 | -1 | 15 | -0.982280 | two-component sensor histidine kinase | |
| PSPPH_1264 | 0 | 14 | -1.561046 | type III helper protein HrpW1 | |
| PSPPH_1265 | 0 | 15 | -1.207080 | type III chaperone protein ShcM | |
| PSPPH_1267 | 0 | 15 | -1.055848 | type III chaperone protein AvrF | |
| PSPPH_1268 | 0 | 13 | -1.010276 | type III effector AvrE1 | |
| PSPPH_1269 | -2 | 17 | -0.471017 | lytic murein transglycosylase | |
| PSPPH_1270 | 0 | 13 | -0.960479 | type III transcriptional regulator HrpR | |
| PSPPH_1271 | 2 | 15 | -0.470479 | type III transcriptional regulator HrpS | |
| PSPPH_1272 | 4 | 16 | 0.347518 | type III helper protein HrpA2 | |
| PSPPH_1273 | 4 | 17 | 0.077070 | type III restriction system endonuclease | |
| PSPPH_1274 | 2 | 18 | 0.611842 | type III secretion component protein HrpB | |
| PSPPH_1275 | 0 | 15 | 0.125274 | type III secretion component protein HrcJ | |
| PSPPH_1276 | 0 | 16 | -0.153033 | type III secretion component protein HrpD | |
| PSPPH_1277 | 0 | 14 | -0.520680 | type III secretion component protein HrpE | |
| PSPPH_1278 | 0 | 15 | -1.373340 | type III secretion component protein HrpF | |
| PSPPH_1279 | -1 | 13 | -0.560937 | type III secretion component protein HrpG | |
| PSPPH_1280 | -1 | 12 | -0.677125 | type III outer membrane protein HrcC | |
| PSPPH_5227 | 2 | 15 | -0.715174 | HrpT protein | |
| PSPPH_1281 | 3 | 13 | -0.244084 | type III negative regulator of hrp expression | |
| PSPPH_1282 | 3 | 15 | 1.212756 | type III secretion component protein HrcU | |
| PSPPH_1283 | 3 | 17 | 2.645839 | type III secretion component protein HrcT | |
| PSPPH_1284 | 2 | 18 | 2.350331 | type III secretion component protein HrcS | |
| PSPPH_1285 | 1 | 16 | 3.251761 | type III secretion system protein | |
| PSPPH_1286 | 1 | 16 | 3.564508 | type III secretion component protein HrcQb | |
| PSPPH_1287 | 1 | 14 | 2.446800 | type III secretion component protein HrcQa |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1258 | DHBDHDRGNASE | 118 | 3e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1260 | DHBDHDRGNASE | 33 | 2e-04 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1261 | HTHFIS | 69 | 3e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1267 | PF06704 | 222 | 6e-79 | DspF/AvrF protein | |
>PF06704#DspF/AvrF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1268 | FIMBRIALPAPE | 31 | 0.030 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1269 | PF03544 | 38 | 6e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1270 | HTHFIS | 275 | 1e-91 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1271 | HTHFIS | 257 | 4e-85 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1275 | FLGMRINGFLIF | 95 | 2e-24 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1277 | FLGFLIH | 28 | 0.026 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1280 | TYPE3OMGPROT | 608 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1282 | TYPE3IMSPROT | 428 | e-153 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1283 | TYPE3IMRPROT | 166 | 1e-52 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1284 | TYPE3IMQPROT | 77 | 1e-22 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1285 | TYPE3IMPPROT | 240 | 3e-83 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1286 | TYPE3OMOPROT | 47 | 4e-09 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1287 | FLGMOTORFLIM | 29 | 0.015 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| 70 | PSPPH_1723 | PSPPH_1730 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1723 | -2 | 12 | 0.970624 | HlyD family secretion protein | |
| PSPPH_1724 | -1 | 11 | 0.811500 | phosphate transporter family protein | |
| PSPPH_1725 | -1 | 10 | 0.036545 | cation transporter | |
| PSPPH_1726 | -1 | 10 | 0.069382 | aldo/keto reductase | |
| PSPPH_1727 | 0 | 11 | 0.270794 | methyl-accepting chemotaxis protein | |
| PSPPH_1728 | -1 | 12 | -0.258482 | TetR family transcriptional regulator | |
| PSPPH_1729 | 0 | 10 | -0.050720 | sensory box sensor histidine kinase/response | |
| PSPPH_1730 | 0 | 13 | -0.168567 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1723 | RTXTOXIND | 111 | 2e-29 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1727 | PYOCINKILLER | 30 | 0.038 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1728 | HTHTETR | 83 | 7e-22 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1729 | HTHFIS | 67 | 1e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1730 | HTHTETR | 81 | 2e-20 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 71 | PSPPH_1847 | PSPPH_1854 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1847 | -1 | 22 | 2.257098 | *3-ketoacyl-ACP reductase | |
| PSPPH_1848 | -1 | 17 | 1.762049 | isochorismatase | |
| PSPPH_1849 | -1 | 19 | 1.826640 | helicase/SNF2 domain-containing protein | |
| PSPPH_1850 | -1 | 15 | 1.571709 | hypothetical protein | |
| PSPPH_1851 | -1 | 16 | 1.381687 | transcription-repair coupling factor | |
| PSPPH_1852 | 0 | 13 | 0.178744 | glyceraldehyde-3-phosphate dehydrogenase | |
| PSPPH_1853 | -1 | 10 | 0.228879 | hypothetical protein | |
| PSPPH_1854 | -2 | 12 | 0.556527 | major facilitator family transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1847 | DHBDHDRGNASE | 125 | 2e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1848 | ISCHRISMTASE | 46 | 3e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1851 | PYOCINKILLER | 33 | 0.009 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1853 | TCRTETB | 33 | 0.003 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1854 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 72 | PSPPH_1865 | PSPPH_1872 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_1865 | 1 | 11 | -1.210391 | vacJ lipoprotein | |
| PSPPH_1866 | 1 | 12 | -0.867436 | hypothetical protein | |
| PSPPH_1867 | 1 | 12 | -0.860145 | response regulator | |
| PSPPH_1868 | 1 | 14 | -0.455542 | anti-sigma factor antagonist | |
| PSPPH_1869 | 1 | 14 | -0.959276 | transaldolase B | |
| PSPPH_1870 | 1 | 15 | -1.117171 | outer membrane ferripyoverdine receptor | |
| PSPPH_1871 | 2 | 24 | -4.975311 | glutamate carboxypeptidase | |
| PSPPH_1872 | 1 | 31 | -6.240349 | ultraviolet light resistance protein RulA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1865 | VACJLIPOPROT | 227 | 2e-77 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1866 | FLGPRINGFLGI | 25 | 0.044 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1867 | HTHFIS | 116 | 3e-30 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_1872 | BLACTAMASEA | 26 | 0.043 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| 73 | PSPPH_2021 | PSPPH_2027 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2021 | 1 | 15 | 3.487888 | sensor protein KdpD | |
| PSPPH_2022 | 2 | 15 | 2.345767 | KDP operon transcriptional regulatory protein | |
| PSPPH_2023 | 2 | 14 | 2.585669 | lipoprotein | |
| PSPPH_2024 | 2 | 15 | 2.569617 | moxR protein | |
| PSPPH_2025 | 3 | 13 | 2.359010 | hypothetical protein | |
| PSPPH_2026 | 3 | 12 | 2.349831 | transglutaminase | |
| PSPPH_2027 | 2 | 12 | 1.951648 | CHAD domain-containing superfamily |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2021 | PREPILNPTASE | 30 | 0.049 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2022 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2024 | HTHFIS | 30 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2027 | TYPE3OMGPROT | 28 | 0.030 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| 74 | PSPPH_2068 | PSPPH_2075 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2068 | 0 | 15 | 1.572802 | OprF | |
| PSPPH_2069 | 0 | 11 | 1.485546 | uroporphyrin-III C-methyltransferase | |
| PSPPH_2070 | -1 | 10 | 1.291669 | nitrate reductase | |
| PSPPH_2071 | 1 | 10 | 1.682863 | nitrite reductase (NAD(P)H), truncated | |
| PSPPH_2072 | 1 | 12 | 1.961739 | serine/threonine protein kinase | |
| PSPPH_2073 | 2 | 11 | 1.353779 | nitrate transporter | |
| PSPPH_2074 | -1 | 9 | 1.093170 | levansucrase (beta-D-fructofuranosyl | |
| PSPPH_2075 | 0 | 9 | 1.605844 | response regulator NasT |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2068 | OMPADOMAIN | 134 | 8e-39 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2072 | YERSSTKINASE | 38 | 1e-04 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2073 | TCRTETB | 61 | 2e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2075 | HTHFIS | 43 | 4e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 75 | PSPPH_2168 | PSPPH_2190 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2168 | 0 | 16 | 0.182619 | hypothetical protein | |
| PSPPH_2170 | -1 | 18 | -0.281826 | ISPsy18, transposase | |
| PSPPH_2172 | 0 | 20 | 1.051328 | hypothetical protein | |
| PSPPH_2173 | 1 | 18 | 2.319412 | general secretion pathway protein GspJ | |
| PSPPH_2174 | 4 | 18 | 2.745284 | general secretion pathway protein GspH | |
| PSPPH_2175 | 2 | 14 | 2.369711 | hypothetical protein | |
| PSPPH_2176 | 1 | 13 | 2.410246 | general secretion pathway protein GspI | |
| PSPPH_2177 | 1 | 13 | 2.525878 | general secretion pathway protein GspG | |
| PSPPH_2179 | 1 | 11 | 2.252924 | general secretion pathway protein GspL | |
| PSPPH_2180 | 1 | 9 | 0.707078 | general secretion pathway protein GspM | |
| PSPPH_2181 | 1 | 9 | 1.010153 | general secretion pathway protein GspD | |
| PSPPH_2182 | 1 | 10 | 0.701028 | general secretion pathway protein GspE | |
| PSPPH_2183 | 0 | 10 | -0.072184 | general secretion pathway protein GspF | |
| PSPPH_2185 | 0 | 11 | -0.675855 | sensor histidine kinase | |
| PSPPH_2186 | 2 | 12 | -0.528762 | metalloprotease | |
| PSPPH_2187 | 0 | 12 | 0.370364 | amidase | |
| PSPPH_2188 | 2 | 15 | -0.135440 | DeoR family transcriptional regulator | |
| PSPPH_2189 | 1 | 15 | -0.362624 | choline/ethanolamine kinase | |
| PSPPH_2190 | 1 | 14 | 0.467293 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2168 | TCRTETB | 109 | 1e-27 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2173 | BCTERIALGSPG | 34 | 2e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2174 | BCTERIALGSPH | 35 | 3e-05 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2176 | PilS_PF08805 | 33 | 2e-04 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2177 | BCTERIALGSPG | 161 | 3e-54 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2181 | BCTERIALGSPD | 378 | e-123 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2183 | BCTERIALGSPF | 353 | e-122 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2185 | PF06580 | 29 | 0.040 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2186 | CABNDNGRPT | 108 | 2e-27 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2190 | MALTOSEBP | 25 | 0.032 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 76 | PSPPH_2267 | PSPPH_2274 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2267 | 0 | 12 | 1.178680 | lactoylglutathione lyase | |
| PSPPH_2268 | 1 | 12 | 1.671976 | hypothetical protein | |
| PSPPH_2269 | 0 | 10 | 1.283888 | transcriptional regulator | |
| PSPPH_2270 | 0 | 9 | 1.370336 | hypothetical protein | |
| PSPPH_2271 | -2 | 11 | 1.211134 | outer membrane efflux protein | |
| PSPPH_2272 | -1 | 11 | 0.415716 | multidrug efflux RND transporter MexF | |
| PSPPH_2273 | -2 | 11 | 0.293613 | multidrug efflux RND transporter, membrane | |
| PSPPH_2274 | -1 | 10 | 0.569627 | methyl-accepting chemotaxis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2267 | NEISSPPORIN | 30 | 0.005 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2272 | ACRIFLAVINRP | 1089 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2273 | RTXTOXIND | 55 | 2e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2274 | RTXTOXIND | 34 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 77 | PSPPH_2376 | PSPPH_2384 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2376 | 0 | 9 | 1.822255 | DNA-binding response regulator BaeS | |
| PSPPH_2377 | -1 | 9 | 1.268885 | sensor histidine kinase BaeS | |
| PSPPH_2378 | -1 | 10 | 0.697069 | multidrug resistance protein | |
| PSPPH_2379 | -2 | 9 | -0.011894 | multidrug efflux transporter | |
| PSPPH_2380 | -1 | 12 | -0.688465 | hypothetical protein | |
| PSPPH_2381 | -1 | 16 | -1.982098 | hypothetical protein | |
| PSPPH_2383 | 1 | 20 | -3.710935 | *lipoprotein | |
| PSPPH_2384 | 1 | 20 | -2.661053 | isochorismatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2376 | HTHFIS | 79 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2377 | PF06580 | 35 | 4e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2378 | RTXTOXIND | 48 | 6e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2379 | ACRIFLAVINRP | 1184 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2384 | ISCHRISMTASE | 90 | 3e-23 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 78 | PSPPH_2448 | PSPPH_2461 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2448 | -2 | 9 | 0.459084 | TetR family transcriptional regulator | |
| PSPPH_2450 | -2 | 10 | 0.456531 | ISPsy18, transposase | |
| PSPPH_2451 | -1 | 10 | 1.322474 | porin | |
| PSPPH_2452 | 0 | 11 | 2.089383 | multidrug transporter | |
| PSPPH_2453 | 0 | 14 | 2.078073 | aspartate aminotransferase | |
| PSPPH_2454 | 0 | 14 | 1.854320 | nitrogen assimilation transcriptional regulator | |
| PSPPH_2455 | 2 | 13 | 2.124738 | acetyl-CoA carboxylase, biotin carboxyl carrier | |
| PSPPH_2456 | 2 | 12 | 2.348506 | acetyl-CoA carboxylase biotin carboxylase | |
| PSPPH_2457 | 2 | 13 | 2.194676 | hypothetical protein | |
| PSPPH_2458 | 2 | 13 | 1.555465 | urea amidolyase | |
| PSPPH_2459 | 2 | 14 | 1.272415 | acetyl-CoA carboxylase, biotin carboxyl carrier | |
| PSPPH_2460 | 1 | 15 | 0.872799 | hypothetical protein | |
| PSPPH_2461 | -1 | 12 | -0.396439 | short chain dehydrogenase/reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2448 | HTHTETR | 55 | 1e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2452 | TCRTETB | 89 | 4e-21 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2455 | RTXTOXIND | 31 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2456 | ENTSNTHTASED | 30 | 0.016 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2459 | RTXTOXIND | 28 | 0.010 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2461 | DHBDHDRGNASE | 78 | 4e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 79 | PSPPH_2521 | PSPPH_2527 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2521 | -1 | 15 | 2.680336 | type III secretion component | |
| PSPPH_2522 | 0 | 15 | 2.761204 | hypothetical protein | |
| PSPPH_2523 | 1 | 15 | 2.447658 | hypothetical protein | |
| PSPPH_2524 | 1 | 17 | 2.072089 | type III secretion component | |
| PSPPH_2525 | 1 | 16 | 2.696375 | hypothetical protein | |
| PSPPH_2526 | 0 | 19 | 1.582320 | hypothetical protein | |
| PSPPH_2527 | 1 | 18 | 1.772385 | type III secretion component |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2521 | BCTERIALGSPD | 139 | 7e-38 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2523 | SYCDCHAPRONE | 36 | 8e-05 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2524 | TYPE3OMGPROT | 96 | 2e-25 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2527 | FLGMRINGFLIF | 76 | 6e-18 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| 80 | PSPPH_2534 | PSPPH_2543 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2534 | 1 | 12 | -0.021448 | type III secretion component | |
| PSPPH_2535 | -1 | 11 | -1.128523 | type III secretion system protein | |
| PSPPH_2536 | -1 | 11 | -1.181889 | type III secretion component | |
| PSPPH_2537 | -2 | 10 | -1.338064 | type III secretion component | |
| PSPPH_2538 | -2 | 11 | -1.284872 | type III secretion component | |
| PSPPH_2539 | -1 | 9 | -1.369921 | LuxR family transcriptional regulator | |
| PSPPH_2540 | 0 | 10 | -1.808446 | hypothetical protein | |
| PSPPH_2541 | -2 | 10 | -0.899666 | ISPsy18, transposase | |
| PSPPH_2542 | -1 | 10 | 0.569523 | hypothetical protein | |
| PSPPH_2543 | -1 | 9 | 1.383979 | response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2534 | TYPE3OMOPROT | 72 | 1e-16 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2535 | TYPE3IMPPROT | 208 | 2e-70 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2536 | TYPE3IMQPROT | 55 | 1e-13 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2537 | TYPE3IMRPROT | 131 | 3e-39 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2538 | TYPE3IMSPROT | 234 | 5e-77 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2540 | RTXTOXINA | 31 | 0.046 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2543 | HTHFIS | 51 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 81 | PSPPH_2594 | PSPPH_2612 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2594 | -1 | 10 | -0.929703 | ABC transporter MtlK | |
| PSPPH_2595 | -1 | 10 | -1.614194 | mannitol ABC transporter permease | |
| PSPPH_2596 | 0 | 8 | -1.827687 | mannitol ABC transporter substrate-binding | |
| PSPPH_2597 | 1 | 9 | -2.331127 | transcriptional activator MltR | |
| PSPPH_2598 | 0 | 11 | -2.159911 | precorrin 6A synthase | |
| PSPPH_2599 | 1 | 10 | -2.429794 | glycosyltransferase | |
| PSPPH_2600 | 1 | 13 | -2.763853 | response regulator | |
| PSPPH_2601 | 0 | 11 | -2.562933 | sensor histidine kinase/response regulator | |
| PSPPH_2602 | 0 | 14 | -3.000655 | chemotaxis protein CheR | |
| PSPPH_2603 | 0 | 14 | -2.568343 | protein-glutamate methylesterase CheB | |
| PSPPH_2604 | 0 | 11 | -2.060575 | sensor histidine kinase/response regulator | |
| PSPPH_2605 | 0 | 12 | -1.532103 | response regulator | |
| PSPPH_2606 | -1 | 10 | -1.265937 | sensory box sensor histidine kinase/response | |
| PSPPH_2607 | -1 | 10 | -0.916263 | circadian clock gene kaiC | |
| PSPPH_2608 | 1 | 9 | -0.564310 | enoyl-CoA hydratase | |
| PSPPH_2609 | 0 | 9 | -0.442590 | NADH pyrophosphatase | |
| PSPPH_2610 | 0 | 12 | -0.820594 | hypothetical protein | |
| PSPPH_2612 | -2 | 12 | -1.199439 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2594 | PF05272 | 34 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2596 | MALTOSEBP | 39 | 2e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2600 | HTHFIS | 66 | 4e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2601 | HTHFIS | 77 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2604 | HTHFIS | 68 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2605 | HTHFIS | 64 | 5e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2606 | HTHFIS | 70 | 9e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2612 | DHBDHDRGNASE | 129 | 2e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 82 | PSPPH_2640 | PSPPH_2645 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2640 | 0 | 9 | 0.411765 | multidrug RND efflux transporter, membrane | |
| PSPPH_2641 | 0 | 9 | 0.331119 | multidrug RND efflux transporter, permease MdtB | |
| PSPPH_2642 | -2 | 8 | -0.120508 | multidrug RND efflux transporter, permease MdtC | |
| PSPPH_2643 | -2 | 8 | 0.047455 | outer membrane efflux protein | |
| PSPPH_2644 | -2 | 7 | -0.118558 | diguanylate cyclase | |
| PSPPH_2645 | -2 | 8 | -0.003052 | short chain dehydrogenase/reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2640 | RTXTOXIND | 38 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2641 | ACRIFLAVINRP | 822 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2642 | ACRIFLAVINRP | 796 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2645 | DHBDHDRGNASE | 85 | 1e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 83 | PSPPH_2751 | PSPPH_2761 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2751 | 0 | 11 | 1.092133 | achromobactin biosynthetic protein AcsD | |
| PSPPH_2752 | 0 | 12 | 1.277680 | hypothetical protein | |
| PSPPH_2753 | 0 | 12 | 1.567443 | hypothetical protein | |
| PSPPH_2754 | 0 | 13 | 1.186228 | achromobactin biosynthetic protein AcsC | |
| PSPPH_2755 | 2 | 14 | 1.477600 | achromobactin biosynthetic protein AcsB | |
| PSPPH_2756 | 2 | 14 | 0.999089 | achromobactin biosynthetic protein AcsA | |
| PSPPH_2757 | 2 | 16 | 1.351653 | achromobactin-binding periplasmic protein | |
| PSPPH_2758 | 1 | 17 | 0.248551 | achromobactin transport system permease CbrB | |
| PSPPH_2759 | -1 | 15 | -1.494317 | achromobactin transport system permease CbrC | |
| PSPPH_2760 | -1 | 17 | -2.218756 | achromobactin transport ATP-binding protein | |
| PSPPH_2761 | -1 | 20 | -2.567710 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2751 | PF04183 | 184 | 6e-53 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2753 | TCRTETB | 135 | 5e-37 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2754 | PF04183 | 489 | e-169 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2756 | PF04183 | 178 | 7e-51 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2757 | FERRIBNDNGPP | 83 | 2e-20 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2761 | PHPHTRNFRASE | 31 | 0.007 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 84 | PSPPH_2868 | PSPPH_2880 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_2868 | 0 | 13 | 0.396322 | major facilitator family transporter | |
| PSPPH_2869 | 0 | 12 | 0.311544 | manganese transport protein MntH | |
| PSPPH_2870 | 0 | 12 | 0.663164 | major facilitator family transporter | |
| PSPPH_2871 | 1 | 15 | 0.611294 | hypothetical protein | |
| PSPPH_2872 | 0 | 11 | 1.118562 | anaerobic nitric oxide reductase transcriptional | |
| PSPPH_2873 | 0 | 11 | 0.634436 | hypothetical protein | |
| PSPPH_2875 | 0 | 9 | 0.769784 | short chain dehydrogenase | |
| PSPPH_2876 | -1 | 10 | 1.148526 | hypothetical protein | |
| PSPPH_2877 | -1 | 10 | 0.848233 | hypothetical protein | |
| PSPPH_2878 | -2 | 11 | 1.129786 | glycosyl hydrolase | |
| PSPPH_2879 | -2 | 12 | 1.261684 | short chain dehydrogenase/reductase | |
| PSPPH_2880 | -2 | 12 | 0.862556 | aldo/keto reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2868 | TCRTETA | 51 | 6e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2870 | TCRTETA | 32 | 0.004 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2872 | HTHFIS | 363 | e-123 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2875 | DHBDHDRGNASE | 55 | 5e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2879 | DHBDHDRGNASE | 119 | 9e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_2880 | HELNAPAPROT | 29 | 0.015 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| 85 | PSPPH_3040 | PSPPH_3066 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3040 | -2 | 10 | 0.729170 | DNA-binding response regulator | |
| PSPPH_3041 | -2 | 8 | 0.667270 | sensor histidine kinase | |
| PSPPH_3042 | -2 | 10 | 0.596405 | 3-hydroxyacyl-CoA-acyl carrier protein | |
| PSPPH_3043 | -2 | 10 | 0.926895 | RND family efflux transporter MFP subunit | |
| PSPPH_3044 | -1 | 12 | 0.154294 | RND family efflux transporter MFP subunit | |
| PSPPH_3045 | -2 | 13 | -1.408272 | AcrB/AcrD/AcrF family transporter | |
| PSPPH_3046 | -2 | 16 | -3.264322 | 2-pyrone-4,6-dicarboxylate lactonase | |
| PSPPH_3047 | -1 | 16 | -3.105373 | major facilitator family transporter | |
| PSPPH_3048 | -1 | 15 | -1.963131 | GntR family transcriptional regulator | |
| PSPPH_3049 | -1 | 14 | -1.408530 | hypothetical protein | |
| PSPPH_3050 | -1 | 12 | -0.251611 | ATP-binding protein | |
| PSPPH_3052 | 1 | 14 | 2.024036 | hypothetical protein | |
| PSPPH_3053 | 2 | 15 | 3.247363 | phospholipase/carboxylesterase | |
| PSPPH_3054 | 2 | 14 | 3.516508 | general secretion pathway protein GspD | |
| PSPPH_3055 | 4 | 15 | 4.044756 | general secretion pathway protein GspN | |
| PSPPH_3056 | 5 | 16 | 3.565549 | general secretion pathway protein GspM | |
| PSPPH_3057 | 3 | 13 | 3.116297 | general secretion pathway protein GspL | |
| PSPPH_3058 | 0 | 12 | 2.694543 | general secretion pathway protein GspK | |
| PSPPH_3059 | -3 | 11 | 2.805412 | general secretion pathway protein GspJ | |
| PSPPH_3060 | -1 | 13 | 2.528856 | general secretion pathway protein GspI | |
| PSPPH_3061 | -1 | 13 | 2.665334 | general secretion pathway protein GspH | |
| PSPPH_3062 | -1 | 14 | 2.864056 | general secretion pathway protein GspG | |
| PSPPH_3063 | -1 | 12 | 2.806123 | general secretion pathway protein GspF | |
| PSPPH_3064 | -1 | 11 | 2.495055 | general secretion pathway protein GspE | |
| PSPPH_3066 | 0 | 11 | 2.019593 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3040 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3043 | RTXTOXIND | 52 | 3e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3044 | RTXTOXIND | 41 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3045 | ACRIFLAVINRP | 472 | e-152 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3047 | TCRTETB | 41 | 5e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3053 | PF06057 | 30 | 0.006 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3054 | BCTERIALGSPD | 239 | 5e-71 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3055 | TRNSINTIMINR | 27 | 0.040 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3059 | BCTERIALGSPG | 43 | 1e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3060 | BCTERIALGSPH | 34 | 5e-05 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3061 | BCTERIALGSPG | 39 | 1e-06 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3062 | BCTERIALGSPG | 117 | 6e-37 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3063 | BCTERIALGSPF | 317 | e-108 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3066 | HTHTETR | 94 | 6e-26 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 86 | PSPPH_3328 | PSPPH_3334 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3328 | 1 | 15 | -2.683350 | aerotaxis receptor Aer | |
| PSPPH_3329 | 2 | 19 | -3.400000 | ISPsy2, transposase | |
| PSPPH_3330 | 2 | 20 | -3.531412 | ISPsy18, transposase | |
| PSPPH_3331 | 2 | 20 | -3.067702 | hypothetical protein | |
| PSPPH_3332 | 2 | 15 | -2.252660 | outer membrane autotransporter | |
| PSPPH_3333 | 2 | 12 | -2.059588 | hypothetical protein | |
| PSPPH_3334 | 2 | 13 | -0.246588 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3328 | FLAGELLIN | 32 | 0.009 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3331 | IGASERPTASE | 31 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3332 | PRTACTNFAMLY | 264 | 2e-78 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3334 | INTIMIN | 46 | 3e-07 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 87 | PSPPH_3357 | PSPPH_3387 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3357 | -1 | 15 | -0.750037 | flagellar motor protein MotD | |
| PSPPH_3358 | -2 | 17 | -0.888752 | flagellar motor protein | |
| PSPPH_3359 | -1 | 15 | -0.475811 | chemotaxis-specific methylesterase | |
| PSPPH_3360 | 0 | 14 | -0.322078 | chemotaxis sensor histidine kinase CheA | |
| PSPPH_3361 | 0 | 14 | -0.939583 | chemotaxis protein CheZ | |
| PSPPH_3362 | 1 | 12 | -0.443945 | chemotaxis protein CheY | |
| PSPPH_3363 | 1 | 12 | -0.282171 | flagellar biosynthesis sigma factor | |
| PSPPH_3364 | 1 | 12 | -0.072319 | flagellar synthesis regulator FleN | |
| PSPPH_3365 | 3 | 14 | -0.567584 | flagellar biosynthesis regulator FlhF | |
| PSPPH_3366 | 3 | 16 | -1.029031 | flagellar biosynthesis protein FlhA | |
| PSPPH_3367 | 6 | 20 | -0.709629 | flagellar biosynthesis protein FlhB | |
| PSPPH_3368 | 7 | 22 | -0.582004 | flagellar biosynthesis protein FliR | |
| PSPPH_3369 | 5 | 24 | -0.380686 | flagellar biosynthesis protein FliQ | |
| PSPPH_3370 | 4 | 17 | 0.556717 | flagellar biosynthesis protein FliP | |
| PSPPH_3371 | 3 | 17 | 0.394542 | flagellar protein FliO | |
| PSPPH_3372 | 2 | 16 | 0.079173 | flagellar motor switch protein | |
| PSPPH_3373 | 1 | 15 | -0.228778 | flagellar motor switch protein FliM | |
| PSPPH_3374 | 2 | 19 | -0.369354 | flagellar basal body protein FliL | |
| PSPPH_3375 | 1 | 18 | 0.926479 | flagellar hook-length control protein FliK | |
| PSPPH_3376 | 0 | 19 | 0.306217 | Hpt domain-containing protein | |
| PSPPH_3377 | -1 | 16 | 0.612092 | response regulator | |
| PSPPH_3378 | -1 | 15 | 1.090547 | STAS domain-containing protein | |
| PSPPH_3379 | -1 | 16 | 1.257272 | flagellar biosynthesis chaperone | |
| PSPPH_3380 | -1 | 15 | 1.396099 | flagellum-specific ATP synthase | |
| PSPPH_3381 | -1 | 15 | 0.768686 | flagellar assembly protein H | |
| PSPPH_3382 | -1 | 15 | 0.628268 | flagellar motor switch protein G | |
| PSPPH_3383 | -1 | 16 | 0.679658 | flagellar MS-ring protein | |
| PSPPH_3384 | 0 | 17 | 0.195276 | flagellar hook-basal body protein FliE | |
| PSPPH_3385 | -1 | 18 | -0.194350 | Fis family transcriptional regulator | |
| PSPPH_3386 | 0 | 16 | -1.133215 | flagellar sensor histidine kinase FleS | |
| PSPPH_3387 | 2 | 17 | -2.066914 | flagellar regulator FleQ |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3357 | OMPADOMAIN | 62 | 4e-13 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3359 | HTHFIS | 59 | 1e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3360 | PF06580 | 48 | 9e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3362 | HTHFIS | 88 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3367 | TYPE3IMSPROT | 316 | e-108 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3368 | TYPE3IMRPROT | 139 | 2e-42 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3369 | TYPE3IMQPROT | 49 | 1e-11 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3370 | FLGBIOSNFLIP | 261 | 2e-90 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3372 | FLGMOTORFLIN | 121 | 3e-38 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3373 | FLGMOTORFLIM | 250 | 9e-84 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3375 | FLGHOOKFLIK | 48 | 4e-08 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3377 | HTHFIS | 75 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3379 | FLGFLIJ | 44 | 3e-08 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3381 | FLGFLIH | 51 | 1e-09 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3382 | FLGMOTORFLIG | 299 | e-103 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3383 | FLGMRINGFLIF | 514 | e-180 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3384 | FLGHOOKFLIE | 79 | 2e-22 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3385 | HTHFIS | 495 | e-175 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3387 | HTHFIS | 502 | e-178 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 88 | PSPPH_3392 | PSPPH_3407 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3392 | 0 | 10 | -0.187011 | flagellin | |
| PSPPH_3393 | 0 | 9 | 0.200337 | 3-oxoacyl-ACP synthase | |
| PSPPH_3394 | 0 | 11 | 0.624053 | glycosyl transferase family protein | |
| PSPPH_3395 | 0 | 11 | 0.365329 | glycosyl transferase family protein | |
| PSPPH_3396 | 3 | 15 | 0.451099 | flagellar hook-associated protein FlgL | |
| PSPPH_3397 | 2 | 18 | 0.635476 | flagellar hook-associated protein FlgK | |
| PSPPH_3398 | 2 | 18 | 0.521593 | flagellar rod assembly protein FlgJ | |
| PSPPH_3399 | 1 | 17 | 0.127126 | flagellar basal body P-ring biosynthesis protein | |
| PSPPH_3400 | 2 | 15 | -0.406059 | flagellar basal body L-ring protein | |
| PSPPH_3401 | 1 | 14 | -0.665681 | flagellar basal body rod protein FlgG | |
| PSPPH_3402 | 1 | 12 | -0.892461 | flagellar basal body rod protein FlgF | |
| PSPPH_3403 | 1 | 12 | -1.181749 | hypothetical protein | |
| PSPPH_3404 | 1 | 13 | -1.231882 | flagellar basal-body protein | |
| PSPPH_3405 | 2 | 14 | -1.913950 | flagellar hook protein FlgE | |
| PSPPH_3406 | -2 | 14 | -1.275538 | flagellar basal body rod modification protein | |
| PSPPH_3407 | -2 | 15 | -1.481666 | flagellar basal body rod protein FlgC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3392 | FLAGELLIN | 117 | 3e-32 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3396 | FLAGELLIN | 63 | 1e-12 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3397 | FLGHOOKAP1 | 194 | 2e-56 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3398 | FLGFLGJ | 127 | 1e-35 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3399 | FLGPRINGFLGI | 430 | e-153 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3400 | FLGLRINGFLGH | 173 | 3e-56 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3401 | FLGHOOKAP1 | 43 | 9e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3404 | FLGHOOKAP1 | 36 | 4e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3405 | FLGHOOKAP1 | 41 | 6e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3407 | FLGHOOKAP1 | 35 | 9e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 89 | PSPPH_3425 | PSPPH_3429 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3425 | 0 | 12 | 0.024318 | gluconate 5-dehydrogenase | |
| PSPPH_3426 | 1 | 13 | 0.177950 | hypothetical protein | |
| PSPPH_3427 | 0 | 12 | 0.587847 | sensor histidine kinase | |
| PSPPH_3428 | 0 | 12 | 0.663859 | response regulator/TPR domain-containing | |
| PSPPH_3429 | -2 | 12 | 0.645563 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3425 | DHBDHDRGNASE | 131 | 3e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3427 | PF06580 | 29 | 0.022 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3428 | HTHFIS | 51 | 7e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3429 | GPOSANCHOR | 28 | 0.022 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 90 | PSPPH_3547 | PSPPH_3554 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3547 | 0 | 12 | 2.836872 | DNA-binding response regulator | |
| PSPPH_3548 | 0 | 14 | 2.260183 | hypothetical protein | |
| PSPPH_3549 | 0 | 16 | 2.186431 | hypothetical protein | |
| PSPPH_3550 | 0 | 17 | 2.022212 | sensor histidine kinase | |
| PSPPH_3551 | -1 | 17 | 0.949410 | nitroreductase | |
| PSPPH_3552 | -1 | 17 | 0.430103 | potassium uptake protein TrkH | |
| PSPPH_3553 | -1 | 18 | 0.970624 | EmrB/QacA family drug resistance transporter | |
| PSPPH_3554 | 0 | 20 | 0.765225 | multidrug resistance protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3547 | HTHFIS | 103 | 7e-28 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3548 | NEISSPPORIN | 29 | 0.007 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3553 | TCRTETB | 111 | 2e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3554 | RTXTOXIND | 90 | 1e-21 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 91 | PSPPH_3654 | PSPPH_3661 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3654 | 1 | 22 | -3.308959 | TetR family transcriptional regulator | |
| PSPPH_3655 | 1 | 22 | -3.253129 | competence protein ComEA | |
| PSPPH_3656 | 1 | 22 | -3.092696 | nucleotide sugar epimerase/dehydratase WbpM | |
| PSPPH_3657 | 0 | 17 | -3.509466 | glycoside hydrolase family protein | |
| PSPPH_3658 | 1 | 16 | -2.952437 | UDP-glucose 4-epimerase | |
| PSPPH_3659 | 1 | 14 | -1.958109 | metallo-beta-lactamase | |
| PSPPH_3660 | 2 | 17 | -1.183330 | hypothetical protein | |
| PSPPH_3661 | 2 | 16 | -0.811474 | integration host factor subunit beta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3654 | HTHTETR | 48 | 4e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3656 | NUCEPIMERASE | 70 | 4e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3658 | NUCEPIMERASE | 83 | 5e-20 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3661 | DNABINDINGHU | 114 | 3e-37 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 92 | PSPPH_3730 | PSPPH_3737 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3730 | 1 | 15 | 0.883815 | DNA-binding response regulator PhoP | |
| PSPPH_3731 | -1 | 14 | 2.053716 | hypothetical protein | |
| PSPPH_3732 | 0 | 15 | 2.632741 | dienelactone hydrolase | |
| PSPPH_3733 | 0 | 18 | 2.465431 | hypothetical protein | |
| PSPPH_3734 | 0 | 16 | 2.350581 | siderophore biosynthesis protein | |
| PSPPH_3735 | 0 | 16 | 1.996099 | ferric iron reductase FhuF | |
| PSPPH_3736 | 1 | 16 | 1.010486 | sensor histidine kinase | |
| PSPPH_3737 | 1 | 14 | -1.297263 | DNA-binding response regulator RstA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3730 | HTHFIS | 83 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3734 | ENTSNTHTASED | 106 | 2e-30 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3735 | 2FE2SRDCTASE | 69 | 4e-16 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3736 | PF06580 | 39 | 4e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3737 | HTHFIS | 79 | 5e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 93 | PSPPH_3867 | PSPPH_3879 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3867 | 0 | 13 | -0.124916 | hypothetical protein | |
| PSPPH_3868 | 0 | 15 | -0.009377 | ompA family protein | |
| PSPPH_3869 | 1 | 12 | 0.139037 | lipoprotein | |
| PSPPH_3870 | 0 | 11 | 0.283159 | lipoprotein | |
| PSPPH_3871 | 1 | 13 | 0.459639 | hypothetical protein | |
| PSPPH_3872 | -1 | 12 | 1.016705 | TetR family transcriptional regulator | |
| PSPPH_3873 | -1 | 12 | 1.179758 | lysyl-tRNA synthetase | |
| PSPPH_3874 | -1 | 15 | 1.589659 | peptide chain release factor 2 | |
| PSPPH_3875 | -1 | 14 | 1.996681 | response regulator WspR | |
| PSPPH_3876 | -1 | 13 | 1.796717 | chemotaxis-specific methylesterase | |
| PSPPH_3877 | -1 | 12 | 1.550611 | sensor histidine kinase/response regulator | |
| PSPPH_3878 | -2 | 12 | 0.681725 | chemotaxis protein CheW | |
| PSPPH_3879 | -2 | 12 | 0.195093 | chemotaxis protein methyltransferase WspC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3867 | adhesinb | 28 | 0.019 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3868 | OMPADOMAIN | 118 | 1e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3872 | HTHTETR | 52 | 2e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3874 | PHPHTRNFRASE | 32 | 0.003 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3875 | HTHFIS | 63 | 5e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3876 | HTHFIS | 48 | 4e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3877 | HTHFIS | 75 | 3e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3879 | PRTACTNFAMLY | 33 | 0.003 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 94 | PSPPH_3996 | PSPPH_4016 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_3996 | -2 | 11 | -1.248344 | hypothetical protein | |
| PSPPH_3998 | -2 | 9 | 0.083825 | hypothetical protein | |
| PSPPH_3999 | -2 | 9 | 0.125659 | hypothetical protein | |
| PSPPH_4000 | -2 | 9 | -0.175805 | beta-glucosidase | |
| PSPPH_4001 | -2 | 10 | 0.088410 | sensor histidine kinase | |
| PSPPH_4002 | -1 | 10 | -0.018747 | Fis family transcriptional regulator | |
| PSPPH_4003 | -2 | 11 | -0.430453 | sensory box histidine kinase/response regulator | |
| PSPPH_4004 | -2 | 12 | -0.073364 | chaperone protein HscC | |
| PSPPH_4005 | 0 | 14 | -0.315200 | DnaJ domain-containing protein | |
| PSPPH_4007 | 0 | 14 | -0.570847 | hypothetical protein | |
| PSPPH_4008 | -1 | 13 | -0.304595 | hypothetical protein | |
| PSPPH_4009 | -1 | 11 | -0.191942 | hypothetical protein | |
| PSPPH_4010 | -1 | 13 | 0.103354 | EmrB/QacA family drug resistance transporter | |
| PSPPH_4011 | -1 | 13 | -0.360044 | hypothetical protein | |
| PSPPH_4012 | -1 | 15 | 0.405246 | transcriptional regulator TtgR | |
| PSPPH_4013 | -1 | 15 | 1.077645 | RND family efflux transporter MFP subunit | |
| PSPPH_4014 | -1 | 17 | 1.001756 | multidrug/solvent transporter | |
| PSPPH_4015 | -2 | 12 | 1.419109 | NodT family outer membrane efflux lipoprotein | |
| PSPPH_4016 | -1 | 12 | 0.726486 | dicarboxylic acid transport protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_3996 | BCTERIALGSPF | 30 | 0.015 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4002 | HTHFIS | 431 | e-151 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4003 | HTHFIS | 89 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4004 | SHAPEPROTEIN | 122 | 1e-32 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4010 | TCRTETB | 148 | 1e-41 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4012 | HTHTETR | 155 | 7e-50 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4013 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4014 | ACRIFLAVINRP | 1295 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4016 | TCRTETB | 38 | 4e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 95 | PSPPH_4057 | PSPPH_4061 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4057 | -1 | 10 | 1.602127 | major facilitator family transporter | |
| PSPPH_4058 | -1 | 10 | 1.523713 | xenobiotic reductase B | |
| PSPPH_4059 | 0 | 10 | 1.257384 | hypothetical protein | |
| PSPPH_4060 | 0 | 10 | 0.908608 | hypothetical protein | |
| PSPPH_4061 | -1 | 12 | 1.047359 | 3-beta hydroxysteroid dehydrogenase/isomerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4057 | TCRTETB | 54 | 4e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4059 | TONBPROTEIN | 34 | 3e-04 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4060 | RTXTOXIND | 31 | 0.004 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4061 | NUCEPIMERASE | 111 | 2e-30 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 96 | PSPPH_4240 | PSPPH_4246 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4240 | -1 | 13 | -2.303513 | methyl-accepting chemotaxis protein | |
| PSPPH_4241 | 0 | 13 | -1.892995 | LuxR family transcriptional regulator | |
| PSPPH_4242 | -1 | 10 | -1.467014 | sensor histidine kinase/response regulator | |
| PSPPH_4243 | -1 | 10 | -1.341249 | hypothetical protein | |
| PSPPH_4244 | 0 | 10 | -1.163159 | hypothetical protein | |
| PSPPH_4245 | 1 | 10 | -0.288941 | GAF domain-containing protein | |
| PSPPH_4246 | 1 | 11 | -0.071625 | acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4240 | PF06580 | 36 | 4e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4241 | HTHFIS | 57 | 6e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4242 | HTHFIS | 45 | 7e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4244 | PF00577 | 37 | 2e-04 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4246 | SACTRNSFRASE | 33 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 97 | PSPPH_4473 | PSPPH_4484 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4473 | -1 | 17 | 1.844812 | branched-chain amino acid ABC transporter | |
| PSPPH_4474 | 1 | 21 | 2.501039 | urease accessory protein UreD | |
| PSPPH_4475 | 1 | 20 | 1.639814 | urease subunit gamma | |
| PSPPH_4476 | 0 | 17 | 1.128102 | phosphinothricin N-acetyltransferase | |
| PSPPH_4477 | -1 | 16 | 1.166437 | tabtoxin resistance protein | |
| PSPPH_4478 | -1 | 17 | 0.979657 | urease subunit beta | |
| PSPPH_4479 | -2 | 17 | 0.894415 | urease subunit alpha | |
| PSPPH_4480 | -2 | 13 | -0.266227 | hypothetical protein | |
| PSPPH_4481 | -2 | 14 | -0.190699 | sensor histidine kinase | |
| PSPPH_4482 | -2 | 16 | -0.078593 | curved-DNA-binding protein | |
| PSPPH_4483 | 0 | 17 | -0.770811 | hypothetical protein | |
| PSPPH_4484 | 0 | 16 | -0.941056 | molecular chaperone DnaK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4473 | PF05272 | 31 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4476 | SACTRNSFRASE | 35 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4477 | SACTRNSFRASE | 29 | 0.008 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4479 | UREASE | 1120 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4481 | PF06580 | 31 | 0.006 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4484 | SHAPEPROTEIN | 51 | 4e-09 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 98 | PSPPH_4552 | PSPPH_4564 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4552 | 1 | 41 | -9.597759 | phosphopantetheine attachment site | |
| PSPPH_4553 | 0 | 40 | -9.325784 | major facilitator family protein | |
| PSPPH_4554 | -1 | 35 | -7.675912 | arginine aminomutase | |
| PSPPH_4555 | 0 | 15 | -1.261256 | hypothetical protein | |
| PSPPH_4556 | -1 | 12 | -0.074339 | hypothetical protein | |
| PSPPH_4557 | -1 | 9 | 0.375443 | major facilitator family transporter | |
| PSPPH_4558 | -1 | 11 | 0.863148 | MutT domain-containing protein | |
| PSPPH_4559 | -1 | 11 | 1.049250 | transposition helper protein, truncated | |
| PSPPH_4560 | -1 | 12 | 0.909252 | filamentous hemagglutinin | |
| PSPPH_4562 | 0 | 13 | -1.263779 | major facilitator family transporter | |
| PSPPH_4563 | 3 | 17 | -2.045250 | excinuclease ABC subunit A | |
| PSPPH_4564 | 4 | 26 | -3.484029 | bacterioferritin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4552 | ISCHRISMTASE | 25 | 0.022 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4553 | TCRTETB | 36 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4557 | TCRTETA | 31 | 0.009 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4559 | HTHFIS | 32 | 7e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4560 | PF05860 | 74 | 2e-17 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4562 | TCRTETA | 77 | 3e-17 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4564 | HELNAPAPROT | 38 | 3e-06 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| 99 | PSPPH_4827 | PSPPH_4833 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_4827 | 0 | 13 | 2.216899 | heavy metal sensor histidine kinase | |
| PSPPH_4828 | 0 | 16 | 1.904437 | DNA-binding heavy metal response regulator | |
| PSPPH_4829 | 0 | 18 | 1.760359 | CzcC family cobalt/zinc/cadmium efflux | |
| PSPPH_4830 | 0 | 15 | 0.757691 | cation efflux family protein | |
| PSPPH_4831 | 0 | 15 | 0.377298 | cation efflux family protein | |
| PSPPH_4832 | 2 | 15 | -0.819428 | hypothetical protein | |
| PSPPH_4833 | 0 | 14 | -0.536736 | Rhs family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4827 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4828 | HTHFIS | 84 | 7e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4830 | RTXTOXIND | 41 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4831 | ACRIFLAVINRP | 794 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_4833 | BACINVASINB | 34 | 0.007 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| 100 | PSPPH_5114 | PSPPH_5121 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PSPPH_5114 | -1 | 11 | 0.232281 | phosphate regulon transcriptional regulatory | |
| PSPPH_5115 | -1 | 11 | -0.297687 | sensory box sensor histidine kinase PhoR | |
| PSPPH_5116 | -1 | 11 | 0.125193 | transporter | |
| PSPPH_5117 | -1 | 10 | 0.205005 | M24/M37 family peptidase | |
| PSPPH_5118 | -1 | 11 | 0.181968 | response regulator | |
| PSPPH_5119 | -1 | 13 | 0.458197 | phosphate transport system regulatory protein | |
| PSPPH_5120 | -1 | 13 | 0.532805 | phosphate transporter ATP-binding protein | |
| PSPPH_5121 | -2 | 11 | 1.076487 | phosphate ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5114 | HTHFIS | 98 | 9e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5115 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5118 | HTHFIS | 90 | 3e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PSPPH_5121 | RTXTOXIND | 31 | 0.014 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||