| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | NCTC10437_00022 | NCTC10437_00035 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00022 | 2 | 13 | 0.692075 | protein kinase | |
| NCTC10437_00023 | 2 | 13 | 0.533865 | penicillin-binding transpeptidase | |
| NCTC10437_00024 | 1 | 13 | 0.552325 | cell cycle protein | |
| NCTC10437_00025 | 1 | 13 | 1.378944 | protein phosphatase 2C domain-containing | |
| NCTC10437_00026 | 2 | 13 | 0.240367 | FHA domain-containing protein | |
| NCTC10437_00027 | 2 | 12 | 0.991314 | FHA domain-containing protein | |
| NCTC10437_00029 | 1 | 12 | 1.074154 | *TetR family transcriptional regulator | |
| NCTC10437_00030 | 2 | 13 | 1.207065 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_00031 | 2 | 15 | 1.498350 | lipoprotein LppJ | |
| NCTC10437_00032 | 2 | 18 | 1.771947 | Alpha/beta hydrolase of uncharacterised function | |
| NCTC10437_00033 | 4 | 21 | 3.405307 | Uncharacterised protein | |
| NCTC10437_00034 | 4 | 21 | 1.947641 | Uncharacterised protein | |
| NCTC10437_00035 | 5 | 21 | 1.392635 | Protein of uncharacterised function (DUF322) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00022 | YERSSTKINASE | 33 | 0.002 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00025 | PF03544 | 41 | 6e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00029 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00030 | DHBDHDRGNASE | 67 | 3e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 2 | NCTC10437_00072 | NCTC10437_00085 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00072 | 3 | 10 | -1.126790 | cell division protein FtsK | |
| NCTC10437_00073 | 3 | 12 | -0.595446 | cell division protein FtsK | |
| NCTC10437_00074 | 3 | 12 | -0.156808 | PE-like protein | |
| NCTC10437_00075 | 4 | 12 | 0.063757 | PPE protein | |
| NCTC10437_00076 | 1 | 15 | -0.036231 | WXG repeat protein | |
| NCTC10437_00077 | 1 | 13 | 0.364283 | early secretory antigenic target, 6 kDa | |
| NCTC10437_00078 | 1 | 12 | 0.555180 | chromosome partitioning ATPase | |
| NCTC10437_00079 | 1 | 18 | -0.489462 | type VII secretion integral membrane protein | |
| NCTC10437_00080 | 4 | 30 | -2.327149 | translation initiation factor IF-2 | |
| NCTC10437_00081 | 3 | 31 | -3.210546 | Protein of uncharacterised function (DUF2580) | |
| NCTC10437_00082 | 4 | 26 | -1.345656 | Uncharacterised protein | |
| NCTC10437_00083 | 4 | 21 | -1.191016 | putative alanine and proline rich protein | |
| NCTC10437_00084 | 4 | 21 | -0.801328 | Uncharacterised protein | |
| NCTC10437_00085 | 2 | 17 | 0.061249 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00078 | PF03544 | 32 | 0.003 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 3 | NCTC10437_00175 | NCTC10437_00198 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00175 | 2 | 13 | 0.924797 | PMT family glycosyltransferase, | |
| NCTC10437_00176 | 4 | 15 | 0.952829 | Uncharacterised protein | |
| NCTC10437_00177 | 2 | 16 | 3.043807 | dehydrogenase | |
| NCTC10437_00178 | 3 | 16 | 2.875878 | LysR family transcriptional regulator | |
| NCTC10437_00179 | 3 | 13 | 0.980491 | Major facilitator superfamily MFS_1 | |
| NCTC10437_00180 | 1 | 12 | 0.265670 | Uncharacterised protein | |
| NCTC10437_00181 | 1 | 12 | 0.288452 | Uncharacterized protein conserved in bacteria | |
| NCTC10437_00182 | 0 | 12 | 0.329071 | Uncharacterised protein | |
| NCTC10437_00183 | 0 | 10 | -1.615853 | Uncharacterised protein | |
| NCTC10437_00184 | 0 | 9 | -1.313515 | Transport protein | |
| NCTC10437_00185 | 2 | 12 | -0.423149 | mycobacterium membrane protein | |
| NCTC10437_00186 | 2 | 11 | -0.169382 | PPOX class probable F420-dependent enzyme | |
| NCTC10437_00187 | 3 | 11 | 1.480230 | endopeptidase | |
| NCTC10437_00188 | 2 | 11 | 1.383431 | IclR family transcriptional regulator | |
| NCTC10437_00189 | 2 | 12 | 2.672914 | dihydroxy-acid dehydratase | |
| NCTC10437_00190 | 3 | 13 | 3.998604 | putative lipoprotein | |
| NCTC10437_00191 | 0 | 11 | 3.697569 | regulated in copper repressor | |
| NCTC10437_00192 | 1 | 10 | 3.897435 | Uncharacterised protein | |
| NCTC10437_00193 | 0 | 9 | 2.514975 | two-component regulator receiver | |
| NCTC10437_00194 | -1 | 9 | 2.566489 | two-component regulator - sensor kinase | |
| NCTC10437_00195 | -1 | 8 | 1.977783 | S-adenosyl-L-methionine-dependent methyl | |
| NCTC10437_00196 | 0 | 10 | 2.281206 | ErfK/YbiS/YcfS/YnhG family protein | |
| NCTC10437_00197 | 2 | 12 | 2.748988 | Uncharacterised protein | |
| NCTC10437_00198 | 2 | 11 | 2.158600 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00175 | PERTACTIN | 30 | 0.027 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00177 | DHBDHDRGNASE | 75 | 2e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00182 | RTXTOXINA | 40 | 3e-05 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00184 | ACRIFLAVINRP | 46 | 9e-07 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00193 | HTHFIS | 73 | 3e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00194 | PF05616 | 34 | 0.002 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00196 | PF03544 | 38 | 3e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00197 | ACRIFLAVINRP | 29 | 0.035 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 4 | NCTC10437_00302 | NCTC10437_00313 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00302 | 3 | 22 | -2.745657 | Uncharacterised protein | |
| NCTC10437_00303 | 2 | 25 | -4.287116 | lysine exporter protein LysE/YggA | |
| NCTC10437_00304 | 3 | 29 | -5.244377 | nucleoside-diphosphate-sugar epimerase | |
| NCTC10437_00305 | 4 | 28 | -5.658066 | Emopamil binding protein | |
| NCTC10437_00306 | 4 | 28 | -5.373634 | transcriptional regulator | |
| NCTC10437_00307 | 5 | 28 | -5.645096 | virulence factor Mce family protein | |
| NCTC10437_00308 | 5 | 28 | -6.059566 | virulence factor Mce family protein | |
| NCTC10437_00309 | 5 | 29 | -7.410698 | MCE-family protein MCE4d | |
| NCTC10437_00310 | 5 | 30 | -8.007140 | virulence factor Mce family protein | |
| NCTC10437_00311 | 4 | 29 | -7.445965 | MCE-family protein MCE4b | |
| NCTC10437_00312 | 4 | 25 | -5.948875 | Virulence factor Mce family protein | |
| NCTC10437_00313 | 2 | 19 | -4.406060 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00304 | NUCEPIMERASE | 34 | 7e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00306 | HTHTETR | 58 | 8e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00307 | PF03544 | 37 | 1e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00309 | PF03544 | 33 | 0.002 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00310 | RTXTOXIND | 34 | 6e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 5 | NCTC10437_00329 | NCTC10437_00334 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00329 | -1 | 9 | 3.099228 | diguanylate cyclase | |
| NCTC10437_00330 | 0 | 9 | 3.166030 | chromosome replication initiation inhibitor | |
| NCTC10437_00331 | 0 | 9 | 3.360349 | precorrin-6A synthase, deacetylating | |
| NCTC10437_00332 | 0 | 10 | 3.207287 | cobyric acid synthase | |
| NCTC10437_00333 | 5 | 13 | 4.033062 | precorrin-6A reductase | |
| NCTC10437_00334 | 4 | 13 | 2.590158 | cobalbumin biosynthesis protein |
| 6 | NCTC10437_00384 | NCTC10437_00396 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00384 | 2 | 8 | 0.024595 | trans-aconitate methyltransferase | |
| NCTC10437_00385 | 2 | 7 | 0.082656 | sulfate adenylyltransferase subunit 1 / | |
| NCTC10437_00386 | 1 | 9 | 0.149859 | sulfate adenylyltransferase subunit 2 | |
| NCTC10437_00387 | 0 | 7 | 0.810480 | putative sulfotransferase | |
| NCTC10437_00388 | 1 | 7 | 1.140945 | arylsulfatase A family protein | |
| NCTC10437_00389 | 0 | 10 | 1.931235 | Uncharacterised protein | |
| NCTC10437_00390 | 0 | 11 | 1.727474 | Uncharacterised protein | |
| NCTC10437_00391 | 0 | 9 | 0.799346 | PA-phosphatase-like phosphoesterase | |
| NCTC10437_00392 | 0 | 9 | 1.927099 | PA-phosphatase-like phosphoesterase | |
| NCTC10437_00393 | 2 | 9 | 1.336193 | Helix-turn-helix domain | |
| NCTC10437_00394 | 3 | 10 | 1.009431 | activator of Hsp90 ATPase 1 family protein | |
| NCTC10437_00395 | 2 | 12 | 0.100063 | Conserved exported protein of uncharacterised | |
| NCTC10437_00396 | 2 | 11 | -0.201233 | bile acid 7-alpha dehydratase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00385 | TCRTETOQM | 64 | 7e-13 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 7 | NCTC10437_00453 | NCTC10437_00466 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00453 | 2 | 11 | 2.233452 | Uncharacterised protein | |
| NCTC10437_00454 | 2 | 11 | 2.262563 | Uncharacterised protein | |
| NCTC10437_00455 | 0 | 11 | 2.396554 | dynamin family protein | |
| NCTC10437_00456 | 2 | 12 | 3.203465 | Isoniazid inducible protein IniC | |
| NCTC10437_00457 | 3 | 10 | 1.893609 | molecular chaperone | |
| NCTC10437_00458 | 3 | 9 | 0.421048 | Uncharacterised protein | |
| NCTC10437_00459 | 3 | 7 | -0.119156 | Uncharacterised protein | |
| NCTC10437_00460 | 2 | 8 | 0.026504 | luciferase family protein | |
| NCTC10437_00461 | 1 | 9 | 0.095748 | TIGR03085 family protein | |
| NCTC10437_00462 | 1 | 11 | -1.049337 | glycosyl hydrolase, glucoamylase | |
| NCTC10437_00463 | 1 | 12 | -1.175816 | glucose-6-phosphate 1-dehydrogenase | |
| NCTC10437_00464 | 1 | 15 | -1.363647 | mycothione reductase | |
| NCTC10437_00465 | 3 | 13 | -1.246882 | putative lipoprotein LpqJ | |
| NCTC10437_00466 | 2 | 13 | -1.296169 | Protein of uncharacterised function (DUF2910) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00457 | TONBPROTEIN | 53 | 7e-10 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 8 | NCTC10437_00494 | NCTC10437_00499 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00494 | 2 | 12 | -0.517867 | transcriptional regulator | |
| NCTC10437_00495 | 3 | 15 | -0.996464 | putative membrane-associated protein | |
| NCTC10437_00496 | 2 | 16 | -0.755400 | alcohol dehydrogenase | |
| NCTC10437_00497 | 3 | 21 | -2.579144 | Protein of uncharacterised function (DUF3558) | |
| NCTC10437_00498 | 4 | 22 | -3.091601 | Uncharacterised protein | |
| NCTC10437_00499 | 3 | 18 | -2.954685 | Protein of uncharacterised function (DUF732) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00494 | HTHTETR | 63 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 9 | NCTC10437_00512 | NCTC10437_00523 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00512 | 2 | 12 | 1.407504 | diguanylate cyclase | |
| NCTC10437_00513 | 3 | 12 | 2.212292 | Uncharacterised protein | |
| NCTC10437_00514 | 2 | 11 | 2.962716 | putative ferredoxin | |
| NCTC10437_00515 | 2 | 11 | 2.963159 | cytochrome P450 | |
| NCTC10437_00516 | 1 | 10 | 2.967591 | MMPL domain-containing protein | |
| NCTC10437_00517 | 2 | 10 | 2.238416 | MarR family transcriptional regulator | |
| NCTC10437_00518 | 3 | 11 | 2.018153 | Na+ antiporter | |
| NCTC10437_00519 | 2 | 13 | 0.958806 | formate-dependent phosphoribosylglycinamide | |
| NCTC10437_00520 | 1 | 14 | -0.450824 | Conserved membrane protein of uncharacterised | |
| NCTC10437_00521 | 0 | 13 | 0.001272 | Rhodanese domain-containing protein | |
| NCTC10437_00522 | 1 | 14 | 0.241865 | O-succinylhomoserine sulfhydrylase | |
| NCTC10437_00523 | 2 | 13 | 0.626605 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00516 | ACRIFLAVINRP | 54 | 1e-09 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00520 | PilS_PF08805 | 28 | 0.009 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| 10 | NCTC10437_00545 | NCTC10437_00556 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00545 | 2 | 13 | 3.445218 | Conserved membrane protein of uncharacterised | |
| NCTC10437_00546 | 3 | 13 | 4.014031 | ADP-ribose pyrophosphatase | |
| NCTC10437_00547 | 3 | 13 | 3.598962 | thiamine-phosphate diphosphorylase | |
| NCTC10437_00549 | 5 | 14 | 3.418666 | thiamine biosynthesis protein ThiS | |
| NCTC10437_00550 | 2 | 12 | 2.909372 | thiazole synthase | |
| NCTC10437_00551 | 4 | 14 | 2.427042 | GDSL family lipase | |
| NCTC10437_00552 | 3 | 12 | 1.350355 | ABC transporter--like protein | |
| NCTC10437_00553 | 3 | 13 | 1.078677 | putative ABC transporter membrane protein | |
| NCTC10437_00554 | 3 | 12 | 0.619791 | alpha/beta hydrolase fold protein | |
| NCTC10437_00555 | 2 | 11 | -0.443197 | aminopeptidase Y | |
| NCTC10437_00556 | 2 | 10 | -0.565839 | aminopeptidase Y |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00551 | RTXTOXINA | 29 | 0.017 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 11 | NCTC10437_00592 | NCTC10437_00605 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00592 | 3 | 12 | -0.123573 | putative monovalent cation/H+ antiporter subunit | |
| NCTC10437_00593 | 2 | 11 | -0.086552 | putative monovalent cation/H+ antiporter subunit | |
| NCTC10437_00594 | 2 | 12 | 0.115919 | putative monovalent cation/H+ antiporter subunit | |
| NCTC10437_00595 | 2 | 11 | 0.578547 | putative monovalent cation/H+ antiporter subunit | |
| NCTC10437_00596 | 1 | 10 | 1.837076 | putative monovalent cation/H+ antiporter subunit | |
| NCTC10437_00597 | 2 | 11 | 2.023933 | NADH:ubiquinone oxidoreductase subunit 5 (chain | |
| NCTC10437_00598 | 2 | 9 | 2.338942 | TrkA domain-containing protein | |
| NCTC10437_00599 | 1 | 10 | 3.051146 | NhaP-type Na+(K+)/H+ antiporter | |
| NCTC10437_00600 | 0 | 11 | 3.532775 | protein of uncharacterised function (DUF1707) | |
| NCTC10437_00601 | 0 | 12 | 3.389241 | vesicle-fusing ATPase | |
| NCTC10437_00602 | 0 | 13 | 3.162353 | CDP-diacylglycerol--serine | |
| NCTC10437_00603 | 2 | 13 | 3.599304 | phosphatidylserine decarboxylase | |
| NCTC10437_00604 | 3 | 15 | 3.229416 | molybdenum cofactor synthesis domain-containing | |
| NCTC10437_00605 | 2 | 13 | 2.368854 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00605 | DHBDHDRGNASE | 59 | 4e-12 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 12 | NCTC10437_00644 | NCTC10437_00668 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00644 | 0 | 10 | 3.143901 | putative GAF sensor protein | |
| NCTC10437_00645 | 1 | 11 | 2.899097 | Uncharacterized protein conserved in bacteria | |
| NCTC10437_00646 | 2 | 11 | 3.629750 | hydrophobic protein | |
| NCTC10437_00647 | 2 | 12 | 4.106364 | transmembrane protein | |
| NCTC10437_00648 | -1 | 10 | 2.389587 | extracellular solute-binding protein | |
| NCTC10437_00649 | 1 | 10 | 2.058524 | binding-protein-dependent transport system inner | |
| NCTC10437_00650 | 1 | 11 | 1.525934 | binding-protein-dependent transport system inner | |
| NCTC10437_00651 | 0 | 10 | 1.706689 | ABC transporter-like protein | |
| NCTC10437_00652 | -1 | 10 | 1.196193 | ABC transporter-like protein | |
| NCTC10437_00653 | -1 | 11 | 0.656117 | dihydrolipoamide dehydrogenase | |
| NCTC10437_00654 | 2 | 10 | 2.626349 | Uncharacterised protein | |
| NCTC10437_00655 | 1 | 10 | 2.530667 | diguanylate cyclase | |
| NCTC10437_00656 | 0 | 12 | 1.549296 | alpha/beta hydrolase fold protein | |
| NCTC10437_00657 | 1 | 11 | 0.169983 | Uncharacterised protein | |
| NCTC10437_00658 | 1 | 12 | -0.186892 | 2-polyprenyl-6-methoxyphenol hydroxylase-like | |
| NCTC10437_00659 | 2 | 14 | -0.498791 | TetR family transcriptional regulator | |
| NCTC10437_00660 | 2 | 12 | -1.122745 | carboxymuconolactone decarboxylase | |
| NCTC10437_00661 | 1 | 11 | -1.856061 | transcriptional regulator | |
| NCTC10437_00662 | 1 | 12 | -2.256801 | acyl-ACP thioesterase | |
| NCTC10437_00663 | 1 | 12 | -1.902760 | isocitrate lyase | |
| NCTC10437_00664 | 2 | 10 | -2.509612 | 3-hydroxyacyl-CoA dehydrogenase | |
| NCTC10437_00665 | 3 | 11 | -2.133656 | cullin, a subunit of E3 ubiquitin ligase | |
| NCTC10437_00666 | 3 | 10 | -2.091293 | polyphosphate:nucleotide phosphotransferase | |
| NCTC10437_00667 | 3 | 11 | -0.959177 | TetR family transcriptional regulator | |
| NCTC10437_00668 | 3 | 12 | -0.447522 | transmembrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00648 | FIMBRIALPAPF | 29 | 0.021 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00650 | ACRIFLAVINRP | 28 | 0.038 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00651 | HTHFIS | 31 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00659 | TETREPRESSOR | 60 | 3e-13 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00667 | HTHTETR | 49 | 3e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 13 | NCTC10437_00715 | NCTC10437_00748 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00715 | 3 | 12 | 0.902164 | Uncharacterised protein | |
| NCTC10437_00716 | 2 | 13 | 1.933406 | pyridoxamine 5'-phosphate oxidase | |
| NCTC10437_00717 | 2 | 13 | 2.232897 | cytochrome P450 | |
| NCTC10437_00718 | 1 | 13 | 1.691980 | Predicted membrane protein | |
| NCTC10437_00719 | 3 | 15 | 1.879926 | deazaflavin-dependent nitroreductase family | |
| NCTC10437_00720 | 1 | 14 | 1.344018 | purine-cytosine permease-like transporter | |
| NCTC10437_00721 | 2 | 16 | 1.286920 | glutamate-1-semialdehyde-2,1-aminomutase | |
| NCTC10437_00722 | 1 | 15 | 0.976437 | fructose-2,6-bisphosphatase | |
| NCTC10437_00723 | 0 | 15 | 0.697558 | alkyl hydroperoxide reductase/ Thiol specific | |
| NCTC10437_00724 | -1 | 15 | 0.898536 | cytochrome c biogenesis protein | |
| NCTC10437_00725 | -3 | 12 | 0.720496 | ResB family protein | |
| NCTC10437_00726 | 0 | 11 | 1.993697 | cytochrome C biogenesis protein CcsB | |
| NCTC10437_00727 | 0 | 13 | 2.716286 | chromosome partitioning ATPase | |
| NCTC10437_00728 | 2 | 14 | 3.381380 | Uncharacterised protein | |
| NCTC10437_00729 | 3 | 13 | 3.507496 | Conserved membrane protein of uncharacterised | |
| NCTC10437_00730 | 3 | 12 | 2.603211 | SnoaL-like polyketide cyclase | |
| NCTC10437_00731 | 3 | 12 | 2.385522 | Uncharacterised protein | |
| NCTC10437_00732 | 4 | 12 | 2.051372 | Uncharacterised protein | |
| NCTC10437_00733 | 2 | 11 | 1.753543 | Uncharacterised protein | |
| NCTC10437_00734 | 2 | 9 | 2.779480 | Uncharacterised protein | |
| NCTC10437_00735 | 2 | 9 | 2.639026 | lipoprotein | |
| NCTC10437_00736 | 2 | 12 | 3.387262 | ATPase | |
| NCTC10437_00737 | 1 | 12 | 3.508018 | 1,4-dihydroxy-2-naphthoate prenyltransferase | |
| NCTC10437_00738 | 0 | 12 | 3.427793 | Uncharacterised protein | |
| NCTC10437_00739 | 1 | 12 | 3.333165 | EmbB | |
| NCTC10437_00740 | 0 | 14 | 2.761258 | methylthioadenosine phosphorylase | |
| NCTC10437_00741 | 1 | 14 | 3.175879 | nucleoside-diphosphate-sugar epimerase | |
| NCTC10437_00742 | 1 | 14 | 3.017110 | 2-nitropropane dioxygenase | |
| NCTC10437_00743 | 3 | 16 | 2.915717 | signal transduction histidine kinase | |
| NCTC10437_00744 | 4 | 17 | 2.990415 | response regulator with CheY-like receiver | |
| NCTC10437_00745 | 4 | 16 | 3.600265 | glycosyl transferase family protein | |
| NCTC10437_00746 | 3 | 14 | 2.597804 | glycosyltransferase | |
| NCTC10437_00747 | 2 | 11 | 2.793875 | type 12 methyltransferase | |
| NCTC10437_00748 | 2 | 11 | 2.695202 | sulfite oxidase-like oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00721 | FLGMRINGFLIF | 30 | 0.028 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00736 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00741 | NUCEPIMERASE | 167 | 3e-51 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00744 | HTHFIS | 105 | 2e-28 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 14 | NCTC10437_00866 | NCTC10437_00897 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00866 | 2 | 10 | -0.081818 | transmembrane proteinm, MmpS5 | |
| NCTC10437_00867 | 1 | 10 | 0.820919 | TetR family transcriptional regulator | |
| NCTC10437_00868 | 0 | 14 | 0.545759 | Transposase, IS30 family | |
| NCTC10437_00869 | -1 | 20 | 0.951960 | putative dehydrogenase | |
| NCTC10437_00870 | 0 | 17 | 1.592251 | ABC-type spermidine/putrescine transport system, | |
| NCTC10437_00871 | 4 | 11 | -1.640039 | ABC-type spermidine/putrescine transport system, | |
| NCTC10437_00872 | 7 | 18 | -4.730081 | spermidine/putrescine ABC transporter | |
| NCTC10437_00873 | 7 | 28 | -6.979113 | Spermidine/putrescine-binding periplasmic | |
| NCTC10437_00874 | 7 | 37 | -8.104046 | sugar phosphate isomerase/epimerase | |
| NCTC10437_00875 | 8 | 44 | -8.593829 | transcriptional regulator/sugar kinase | |
| NCTC10437_00876 | 8 | 46 | -9.854222 | Uncharacterized protein conserved in bacteria | |
| NCTC10437_00877 | 7 | 44 | -9.721037 | RNA-directed DNA polymerase | |
| NCTC10437_00878 | 3 | 36 | -7.622734 | Domain of uncharacterised function DUF87 | |
| NCTC10437_00879 | 4 | 31 | -6.441112 | Uncharacterised protein | |
| NCTC10437_00880 | 2 | 24 | -5.243701 | Site-specific DNA methylase | |
| NCTC10437_00881 | 1 | 17 | -4.408263 | transposase ISMyma01_aa2-like protein | |
| NCTC10437_00882 | 1 | 20 | -4.602781 | transposase IS3/IS911 family protein | |
| NCTC10437_00883 | 1 | 22 | -4.505638 | fatty acid desaturase | |
| NCTC10437_00884 | 1 | 22 | -3.028287 | Uncharacterised protein | |
| NCTC10437_00885 | 1 | 17 | -1.007289 | Uncharacterised protein | |
| NCTC10437_00886 | 1 | 15 | -0.242601 | Uncharacterised protein | |
| NCTC10437_00887 | 0 | 12 | 0.114319 | Uncharacterised protein | |
| NCTC10437_00888 | 0 | 9 | 0.443143 | ESX-1 secretion-associated protein EspE | |
| NCTC10437_00889 | 2 | 9 | 1.820010 | Uncharacterized conserved protein | |
| NCTC10437_00890 | 0 | 9 | 1.347298 | allophanate hydrolase subunit 2 | |
| NCTC10437_00891 | 0 | 9 | 1.061236 | allophanate hydrolase subunit 1 | |
| NCTC10437_00892 | 1 | 9 | 1.287091 | Mn2+/Fe2- transporter NRAMP family | |
| NCTC10437_00893 | 2 | 10 | 1.678337 | GntR family transcriptional regulator | |
| NCTC10437_00894 | 1 | 11 | 1.109941 | Transcriptional regulator, effector-binding | |
| NCTC10437_00895 | 1 | 11 | 1.252829 | prevent-host-death family protein | |
| NCTC10437_00896 | 1 | 11 | 1.410440 | ribonuclease H | |
| NCTC10437_00897 | 2 | 16 | 0.972993 | VanW family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00867 | HTHTETR | 57 | 7e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00872 | PF05272 | 28 | 0.047 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00876 | PYOCINKILLER | 32 | 0.007 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00896 | SECA | 33 | 0.001 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 15 | NCTC10437_01008 | NCTC10437_01025 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01008 | 0 | 13 | -3.200345 | beta-lactamase domain-containing protein | |
| NCTC10437_01011 | 4 | 11 | -3.579386 | **50S ribosomal protein L33 | |
| NCTC10437_01012 | 4 | 12 | -3.159270 | (3R)-hydroxyacyl-ACP dehydratase subunit HadA | |
| NCTC10437_01013 | 5 | 16 | -2.138322 | (3R)-hydroxyacyl-ACP dehydratase subunit HadB | |
| NCTC10437_01014 | 5 | 15 | -1.714738 | (3R)-hydroxyacyl-ACP dehydratase subunit HadC | |
| NCTC10437_01016 | 4 | 13 | -1.446533 | *preprotein translocase subunit SecE | |
| NCTC10437_01017 | 4 | 14 | -2.201755 | transcription antitermination protein nusG | |
| NCTC10437_01018 | 2 | 14 | -2.399350 | 50S ribosomal protein L11 | |
| NCTC10437_01019 | 1 | 12 | -2.082181 | 50S ribosomal protein L1 | |
| NCTC10437_01020 | 1 | 12 | -2.052212 | Uncharacterised protein | |
| NCTC10437_01021 | 1 | 10 | -1.973560 | PE-PPE domain-containing protein | |
| NCTC10437_01022 | 1 | 11 | -1.439773 | cyclopropane-fatty-acyl-phospholipid synthase | |
| NCTC10437_01023 | 1 | 11 | -0.614590 | methyltransferase, cyclopropane fatty acid | |
| NCTC10437_01024 | 1 | 11 | -0.201334 | alpha/beta hydrolase fold protein | |
| NCTC10437_01025 | 2 | 12 | -0.166426 | putative unusual protein kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01016 | SECETRNLCASE | 39 | 7e-07 | Bacterial translocase SecE signature. | |
>SECETRNLCASE#Bacterial translocase SecE signature. | |||||
| 16 | NCTC10437_01036 | NCTC10437_01047 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01036 | 2 | 17 | -1.505026 | LSU ribosomal protein L12P | |
| NCTC10437_01037 | 1 | 15 | -1.269135 | ABC-type transport system involved in resistance | |
| NCTC10437_01038 | 1 | 15 | -1.103839 | esterase/lipase | |
| NCTC10437_01039 | 1 | 17 | -1.405021 | esterase/lipase | |
| NCTC10437_01040 | 0 | 17 | -1.784949 | DNA-directed RNA polymerase subunit beta | |
| NCTC10437_01041 | 1 | 15 | -1.372045 | DNA-directed RNA polymerase subunit beta' | |
| NCTC10437_01042 | 3 | 14 | 2.808375 | putative hydrolase | |
| NCTC10437_01043 | 3 | 12 | 1.975053 | Phytanoyl-CoA dioxygenase (PhyH) | |
| NCTC10437_01044 | 2 | 11 | 1.268219 | endonuclease IV | |
| NCTC10437_01045 | 2 | 11 | 0.660836 | PA-phosphatase-like phosphoesterase | |
| NCTC10437_01046 | 3 | 14 | 0.894055 | FkbM family methyltransferase | |
| NCTC10437_01047 | 3 | 12 | 1.528282 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01039 | BINARYTOXINB | 29 | 0.048 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01047 | cloacin | 39 | 1e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 17 | NCTC10437_01305 | NCTC10437_01315 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01305 | 1 | 11 | 3.723245 | putative F420-dependent oxidoreductase, Rv2161c | |
| NCTC10437_01306 | 0 | 8 | 3.593782 | Uncharacterised protein | |
| NCTC10437_01307 | 1 | 8 | 3.746544 | NLP/P60 protein | |
| NCTC10437_01308 | 2 | 7 | 3.189587 | Protein of uncharacterised function (DUF2580) | |
| NCTC10437_01309 | 2 | 8 | 2.921650 | uracil phosphoribosyltransferase | |
| NCTC10437_01310 | 2 | 11 | 2.973678 | phosphomannomutase | |
| NCTC10437_01311 | 3 | 13 | 2.272925 | MarR family transcriptional regulator | |
| NCTC10437_01312 | 3 | 10 | 0.434049 | putative ammonia monooxygenase | |
| NCTC10437_01313 | 2 | 11 | 0.359993 | purine nucleoside phosphorylase | |
| NCTC10437_01314 | 2 | 10 | -0.199119 | amidohydrolase | |
| NCTC10437_01315 | 2 | 11 | -0.311687 | amidohydrolase |
| 18 | NCTC10437_01375 | NCTC10437_01438 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01375 | 2 | 18 | -0.079398 | extracellular solute-binding protein family 1 | |
| NCTC10437_01376 | 2 | 20 | 0.990749 | sugar ABC transporter integral membrane protein | |
| NCTC10437_01377 | 1 | 17 | 1.690420 | sugar-transport integral membrane protein ABC | |
| NCTC10437_01378 | 1 | 13 | 2.062123 | sugar ABC transporter ATP-binding protein | |
| NCTC10437_01379 | 0 | 12 | 2.115326 | putative acyltransferase | |
| NCTC10437_01380 | 0 | 11 | 1.203439 | ArsR family transcriptional regulator | |
| NCTC10437_01381 | -1 | 10 | 1.056896 | sulfate transporter | |
| NCTC10437_01382 | 1 | 16 | 0.117573 | Uncharacterised protein | |
| NCTC10437_01383 | 1 | 14 | -0.460745 | diguanylate cyclase | |
| NCTC10437_01384 | 2 | 14 | -0.962314 | Fe-S metabolism associated SufE | |
| NCTC10437_01385 | 1 | 12 | -1.002692 | rhodanese domain-containing protein | |
| NCTC10437_01386 | 2 | 14 | -1.288010 | Uncharacterised protein | |
| NCTC10437_01387 | 0 | 17 | -1.123312 | acyltransferase 3 | |
| NCTC10437_01388 | 0 | 15 | -2.002046 | Uncharacterised protein | |
| NCTC10437_01389 | 3 | 19 | -4.045955 | Uncharacterised protein | |
| NCTC10437_01390 | 6 | 27 | -6.244420 | Maf-like protein | |
| NCTC10437_01391 | 7 | 31 | -7.538748 | acetyl-/propionyl-coenzyme A carboxylase AccE5 | |
| NCTC10437_01392 | 8 | 35 | -8.966936 | carboxyl transferase | |
| NCTC10437_01393 | 9 | 52 | -11.110783 | Uncharacterised protein | |
| NCTC10437_01394 | 10 | 53 | -11.583258 | Uncharacterised protein | |
| NCTC10437_01395 | 9 | 53 | -11.861416 | lipopolysaccharide biosynthesis | |
| NCTC10437_01396 | 9 | 49 | -10.128780 | glucose-1-phosphate thymidylyltransferase | |
| NCTC10437_01397 | 10 | 47 | -9.764185 | dTDP-glucose 4,6-dehydratase | |
| NCTC10437_01398 | 11 | 49 | -9.966763 | dTDP-4-dehydrorhamnose reductase | |
| NCTC10437_01399 | 11 | 46 | -9.516436 | Uncharacterised protein | |
| NCTC10437_01400 | 9 | 42 | -9.046378 | Uncharacterised protein | |
| NCTC10437_01401 | 9 | 42 | -9.854003 | polysaccharide biosynthesis protein | |
| NCTC10437_01402 | 7 | 42 | -11.299000 | Uncharacterised protein | |
| NCTC10437_01403 | 7 | 43 | -11.628310 | Lipid A core - O-antigen ligase and related | |
| NCTC10437_01404 | 5 | 34 | -8.638371 | inositol monophosphatase | |
| NCTC10437_01405 | 4 | 31 | -7.751622 | Spore coat polysaccharide biosynthesis protein | |
| NCTC10437_01406 | 4 | 35 | -7.897025 | 3-deoxy-manno-octulosonate cytidylyltransferase | |
| NCTC10437_01407 | 4 | 29 | -6.544606 | type 11 methyltransferase | |
| NCTC10437_01408 | 2 | 21 | -4.805664 | transposase | |
| NCTC10437_01409 | 1 | 19 | -4.513919 | UDP-glucuronic acid decarboxylase 1 | |
| NCTC10437_01410 | -1 | 14 | -3.530198 | exopolysaccharide biosynthesis polyprenyl | |
| NCTC10437_01411 | -1 | 11 | -1.997309 | protein tyrosine phosphatase | |
| NCTC10437_01412 | -2 | 10 | -1.524906 | undecaprenyl pyrophosphate synthase | |
| NCTC10437_01413 | -2 | 9 | -0.635461 | UDP-galactopyranose mutase | |
| NCTC10437_01414 | 0 | 12 | 0.003727 | membrane-flanked domain-containing protein | |
| NCTC10437_01415 | 0 | 12 | 0.191762 | DUF218 domain | |
| NCTC10437_01416 | 0 | 10 | -0.171695 | diguanylate cyclase | |
| NCTC10437_01417 | 1 | 12 | -0.568648 | GtrA family protein | |
| NCTC10437_01418 | 3 | 14 | -0.374273 | phosphoribosylaminoimidazole carboxylase ATPase | |
| NCTC10437_01419 | 3 | 15 | -1.231617 | phosphoribosylaminoimidazole carboxylase | |
| NCTC10437_01420 | 1 | 14 | -1.991871 | Uncharacterised protein | |
| NCTC10437_01421 | 1 | 13 | -1.467574 | putative outer membrane adhesin-like protein | |
| NCTC10437_01422 | -2 | 12 | -1.893549 | isoprenylcysteine carboxyl methyltransferase | |
| NCTC10437_01423 | -1 | 14 | -2.489243 | chalcone/stilbene synthase domain-containing | |
| NCTC10437_01424 | 1 | 14 | -2.787724 | Uncharacterised protein | |
| NCTC10437_01425 | 0 | 14 | -3.116647 | butyryl-CoA dehydrogenase | |
| NCTC10437_01426 | 1 | 17 | -3.296751 | biotin--acetyl-CoA-carboxylase ligase | |
| NCTC10437_01427 | 1 | 16 | -3.339602 | Conserved protein of uncharacterised function, | |
| NCTC10437_01428 | -1 | 12 | -3.187302 | Uncharacterised protein | |
| NCTC10437_01429 | -1 | 10 | -2.109535 | PE-PGRS family protein | |
| NCTC10437_01430 | -1 | 10 | -1.528057 | Conserved protein of uncharacterised function, | |
| NCTC10437_01431 | 0 | 12 | -0.031921 | Uncharacterised protein | |
| NCTC10437_01432 | 0 | 13 | -0.188127 | TIGR03089 family protein | |
| NCTC10437_01433 | 0 | 13 | -0.364715 | cell envelope-related transcriptional | |
| NCTC10437_01434 | 0 | 14 | 0.810065 | dTDP-4-dehydrorhamnose reductase | |
| NCTC10437_01435 | 1 | 13 | 0.408000 | putative glycosyltransferase | |
| NCTC10437_01436 | 2 | 15 | -0.134340 | Nucleoside-diphosphate-sugar pyrophosphorylase | |
| NCTC10437_01437 | 2 | 16 | -0.767382 | cullin, a subunit of E3 ubiquitin ligase | |
| NCTC10437_01438 | 2 | 15 | 0.346263 | NUDIX hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01375 | MALTOSEBP | 52 | 2e-09 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01378 | PF05272 | 36 | 2e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01386 | PRTACTNFAMLY | 26 | 0.032 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01397 | NUCEPIMERASE | 141 | 1e-41 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01398 | NUCEPIMERASE | 41 | 8e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01409 | NUCEPIMERASE | 181 | 3e-53 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01421 | PF03544 | 33 | 0.005 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01434 | NUCEPIMERASE | 44 | 2e-07 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 19 | NCTC10437_01523 | NCTC10437_01582 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01523 | 2 | 20 | -3.888682 | heat shock protein 90 | |
| NCTC10437_01525 | 1 | 25 | -3.839615 | *Predicted ATPase | |
| NCTC10437_01526 | 0 | 22 | -3.268764 | acetyl-CoA acetyltransferase | |
| NCTC10437_01527 | -1 | 20 | -3.400001 | pyruvate ferredoxin/flavodoxin oxidoreductase | |
| NCTC10437_01528 | -1 | 22 | -3.033347 | Sugar diacid utilization regulator | |
| NCTC10437_01529 | 1 | 25 | -4.121699 | Uncharacterised protein | |
| NCTC10437_01530 | 2 | 25 | -3.425804 | aldehyde dehydrogenase | |
| NCTC10437_01531 | 4 | 28 | -3.352802 | putative LysR family transcriptional regulator | |
| NCTC10437_01532 | 4 | 30 | -2.409178 | putative esterase | |
| NCTC10437_01533 | 4 | 29 | -2.622190 | Conserved protein of uncharacterised function, | |
| NCTC10437_01534 | 5 | 27 | -2.814526 | Conserved protein of uncharacterised function, | |
| NCTC10437_01535 | 5 | 31 | -2.901313 | Protein of uncharacterised function (DUF732) | |
| NCTC10437_01536 | 5 | 32 | -2.946192 | Mce associated membrane protein | |
| NCTC10437_01537 | 5 | 31 | -3.122560 | conserved Mce associated membrane protein | |
| NCTC10437_01538 | 6 | 32 | -2.377302 | virulence factor Mce family protein | |
| NCTC10437_01539 | 6 | 32 | -2.220781 | virulence factor Mce family protein | |
| NCTC10437_01540 | 5 | 30 | -2.178780 | virulence factor Mce family protein | |
| NCTC10437_01541 | 4 | 26 | -2.143867 | virulence factor Mce family protein | |
| NCTC10437_01542 | 2 | 22 | -2.061495 | virulence factor Mce family protein | |
| NCTC10437_01543 | 3 | 22 | -1.952586 | ABC-type transport system involved in resistance | |
| NCTC10437_01544 | 2 | 24 | -2.914609 | ABC-type transport system involved in resistance | |
| NCTC10437_01545 | 2 | 25 | -3.427705 | organic solvent resistance ABC transporter | |
| NCTC10437_01546 | 2 | 27 | -3.823513 | transcriptional regulator | |
| NCTC10437_01547 | 2 | 28 | -3.661389 | acyl-CoA synthetase (AMP-forming)/AMP-acid | |
| NCTC10437_01548 | 2 | 29 | -4.761059 | Pigment production hydroxylase | |
| NCTC10437_01549 | 2 | 30 | -5.602465 | HpcE protein | |
| NCTC10437_01550 | 2 | 29 | -5.200591 | oxidoreductase | |
| NCTC10437_01551 | 0 | 28 | -5.098368 | biphenyl-2,3-diol 1,2-dioxygenase 3 | |
| NCTC10437_01552 | 0 | 21 | -4.323985 | alpha/beta hydrolase domain-containing protein | |
| NCTC10437_01553 | 1 | 22 | -4.519039 | F420-dependent methylene-tetrahydromethanopterin | |
| NCTC10437_01554 | 2 | 23 | -4.547769 | GntR family transcriptional regulator | |
| NCTC10437_01555 | 3 | 24 | -4.834386 | bifunctional 3,4-dihydroxy-2-butanone | |
| NCTC10437_01556 | 2 | 23 | -5.215314 | Uncharacterised protein | |
| NCTC10437_01557 | 3 | 24 | -5.154796 | acyl-CoA dehydrogenase | |
| NCTC10437_01558 | 4 | 31 | -5.578882 | Regulator of polyketide synthase expression | |
| NCTC10437_01559 | 4 | 31 | -5.855018 | flavin reductase domain-containing protein | |
| NCTC10437_01560 | 3 | 29 | -5.797010 | monooxygenase | |
| NCTC10437_01561 | 2 | 31 | -6.173009 | alpha/beta hydrolase | |
| NCTC10437_01562 | 2 | 33 | -6.425551 | alcohol dehydrogenase, class IV | |
| NCTC10437_01563 | 1 | 32 | -6.967190 | Citrate synthase | |
| NCTC10437_01564 | 2 | 34 | -7.590850 | 3-oxoacid CoA-transferase, A subunit | |
| NCTC10437_01565 | 2 | 33 | -7.798444 | 3-oxoacid CoA-transferase, B subunit | |
| NCTC10437_01566 | 3 | 36 | -8.074823 | hydroxyquinol 1,2-dioxygenase | |
| NCTC10437_01567 | 2 | 31 | -6.882496 | Probable tautomerase SA1195.1 | |
| NCTC10437_01568 | 2 | 30 | -6.833597 | medium chain fatty-acid-CoA ligase FadD14 | |
| NCTC10437_01569 | 1 | 30 | -6.652728 | NADH dehydrogenase/NAD(P)H nitroreductase | |
| NCTC10437_01570 | 1 | 28 | -5.760071 | Uncharacterised protein | |
| NCTC10437_01571 | 0 | 26 | -5.459692 | Uncharacterised protein | |
| NCTC10437_01572 | -1 | 25 | -5.442224 | Large subunit of N,N-dimethylformamidase | |
| NCTC10437_01573 | 0 | 24 | -5.499618 | Uncharacterised protein | |
| NCTC10437_01574 | 1 | 22 | -5.336761 | ribose ABC transporter periplasmic binding | |
| NCTC10437_01575 | 0 | 21 | -5.086021 | ABC-type sugar transporter, permease protein | |
| NCTC10437_01576 | 1 | 22 | -5.163729 | ABC-type sugar transporter, permease protein | |
| NCTC10437_01577 | 0 | 23 | -5.519291 | sugar ABC transporter, ATP-binding protein | |
| NCTC10437_01578 | 0 | 21 | -5.494019 | amino acid transporter | |
| NCTC10437_01579 | 0 | 20 | -5.471943 | FAD dependent oxidoreductase | |
| NCTC10437_01580 | -1 | 20 | -4.297487 | Uncharacterised protein | |
| NCTC10437_01581 | -1 | 21 | -4.041746 | aldehyde dehydrogenase | |
| NCTC10437_01582 | -1 | 19 | -3.362108 | GntR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01540 | IGASERPTASE | 29 | 0.042 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01541 | PERTACTIN | 35 | 9e-04 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01543 | PF05616 | 35 | 4e-04 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01546 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01572 | BONTOXILYSIN | 34 | 0.003 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| 20 | NCTC10437_01982 | NCTC10437_01997 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01982 | 2 | 9 | -0.658587 | major facilitator transporter | |
| NCTC10437_01983 | 4 | 13 | -0.910315 | 2-keto-4-pentenoate | |
| NCTC10437_01984 | 3 | 13 | -0.640621 | glutamyl-tRNA synthetase | |
| NCTC10437_01987 | 4 | 12 | -1.406268 | **transcriptional regulator | |
| NCTC10437_01988 | 4 | 11 | -1.562418 | isopropylmalate isomerase large subunit | |
| NCTC10437_01989 | 3 | 11 | -0.874033 | 3-isopropylmalate dehydratase, small subunit | |
| NCTC10437_01990 | 2 | 9 | 0.114066 | bacterial nucleoid DNA-binding protein | |
| NCTC10437_01991 | -1 | 8 | 0.292706 | NUDIX hydrolase | |
| NCTC10437_01992 | -1 | 9 | 0.902748 | polyphosphate kinase 1 | |
| NCTC10437_01993 | -1 | 8 | 2.357371 | 2-phospho-L-lactate guanylyltransferase | |
| NCTC10437_01994 | 1 | 8 | 2.685422 | NAD(P)H-dependent glycerol-3-phosphate | |
| NCTC10437_01995 | 0 | 8 | 2.312100 | cystathionine gamma-lyase | |
| NCTC10437_01996 | 0 | 11 | 2.503763 | D-alanyl-alanine synthetase A | |
| NCTC10437_01997 | 2 | 10 | 3.691021 | thiamine-monophosphate kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01982 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01990 | DNABINDINGHU | 77 | 7e-21 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 21 | NCTC10437_02012 | NCTC10437_02019 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02012 | 2 | 10 | 0.454419 | putative methyltransferase | |
| NCTC10437_02013 | 2 | 11 | -0.376020 | phosphopantetheine adenylyltransferase | |
| NCTC10437_02014 | 2 | 11 | 0.331972 | cell division initiation protein | |
| NCTC10437_02015 | 3 | 9 | 1.369439 | metal-binding protein | |
| NCTC10437_02016 | 3 | 9 | 1.469802 | ribonuclease III | |
| NCTC10437_02017 | 1 | 9 | 1.991831 | formamidopyrimidine-DNA glycosylase | |
| NCTC10437_02018 | 2 | 10 | 1.205090 | OsmC family protein | |
| NCTC10437_02019 | 2 | 10 | 1.232085 | acylphosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02013 | LPSBIOSNTHSS | 230 | 8e-81 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02014 | IGASERPTASE | 33 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 22 | NCTC10437_02144 | NCTC10437_02153 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02144 | 2 | 15 | 1.588465 | cobalamin (vitamin B12) biosynthesis protein | |
| NCTC10437_02145 | 1 | 13 | 0.442565 | cobalt transporter CbiM | |
| NCTC10437_02146 | -1 | 9 | -0.771289 | cobalt ABC transporter inner membrane subunit | |
| NCTC10437_02147 | 0 | 10 | -2.243466 | cobalt ABC transporter ATPase | |
| NCTC10437_02148 | 0 | 12 | -3.580265 | integral membrane sensor signal transduction | |
| NCTC10437_02149 | 1 | 19 | -5.836909 | two component transcriptional regulator | |
| NCTC10437_02150 | 1 | 21 | -6.219588 | GntR family transcriptional regulator | |
| NCTC10437_02151 | 2 | 19 | -5.400816 | hydrophobic amino acid ABC transporter | |
| NCTC10437_02152 | 1 | 16 | -4.331947 | ABC-type branched-chain amino acid transport | |
| NCTC10437_02153 | 1 | 15 | -3.787957 | branched-chain amino acid ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02149 | HTHFIS | 93 | 8e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 23 | NCTC10437_02233 | NCTC10437_02253 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02233 | 3 | 10 | 0.732986 | type 12 methyltransferase | |
| NCTC10437_02235 | 5 | 13 | -0.082747 | *N-acetylglutamate synthase | |
| NCTC10437_02236 | 4 | 11 | 1.572981 | CDP-diacylglycerol--glycerol-3-phosphate | |
| NCTC10437_02237 | 4 | 11 | 1.915882 | XRE family transcriptional regulator | |
| NCTC10437_02238 | 2 | 9 | 2.183639 | phage shock protein A, PspA | |
| NCTC10437_02239 | -1 | 8 | 1.624963 | putative membrane alanine rich protein | |
| NCTC10437_02240 | -1 | 10 | 1.474723 | limonene-1,2-epoxide hydrolase | |
| NCTC10437_02241 | -1 | 11 | 2.002017 | UDP-glucuronosyl/UDP-glucosyltransferase | |
| NCTC10437_02242 | 1 | 13 | 0.232471 | Protein of uncharacterised function (DUF3046) | |
| NCTC10437_02243 | 0 | 10 | -0.230898 | X-Pro dipeptidyl-peptidase (S15 family) | |
| NCTC10437_02244 | 1 | 11 | -1.710227 | recombinase A | |
| NCTC10437_02245 | 2 | 12 | -1.714432 | recombination regulator RecX | |
| NCTC10437_02246 | 1 | 11 | -2.909766 | Uncharacterised protein | |
| NCTC10437_02247 | 1 | 9 | -2.048716 | Protein of uncharacterised function (DUF1622) | |
| NCTC10437_02248 | 0 | 9 | -1.322250 | amino acid ABC transporter membrane protein 2, | |
| NCTC10437_02249 | 3 | 10 | -0.113541 | polar amino acid ABC transporter inner membrane | |
| NCTC10437_02250 | 2 | 9 | 0.741590 | extracellular solute-binding protein | |
| NCTC10437_02251 | 0 | 9 | 2.257260 | ABC transporter--like protein | |
| NCTC10437_02252 | -1 | 10 | 3.251234 | (dimethylallyl)adenosine tRNA | |
| NCTC10437_02253 | 0 | 10 | 3.968598 | putative transmembrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02235 | SACTRNSFRASE | 39 | 2e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02238 | RTXTOXIND | 31 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 24 | NCTC10437_02349 | NCTC10437_02354 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02349 | 2 | 13 | -2.198883 | Uncharacterised protein | |
| NCTC10437_02350 | 3 | 13 | -2.543547 | anion transporter | |
| NCTC10437_02351 | 4 | 16 | -2.388621 | anion transporter | |
| NCTC10437_02352 | 2 | 17 | -2.757968 | tartrate dehydrogenase | |
| NCTC10437_02353 | 1 | 20 | -3.233058 | LysR family transcriptional regulator | |
| NCTC10437_02354 | 1 | 19 | -3.288252 | Uncharacterised protein |
| 25 | NCTC10437_02375 | NCTC10437_02382 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02375 | 1 | 13 | 3.349061 | alpha amylase | |
| NCTC10437_02376 | 1 | 16 | 3.773523 | nitroreductase family protein | |
| NCTC10437_02377 | 3 | 21 | 5.061276 | response regulator containing a CheY-like | |
| NCTC10437_02378 | 6 | 22 | 5.865085 | UspA domain-containing protein | |
| NCTC10437_02379 | 4 | 22 | 4.929456 | nitroreductase | |
| NCTC10437_02380 | 6 | 24 | 5.364254 | Uncharacterised protein | |
| NCTC10437_02381 | 6 | 18 | 3.166960 | Uncharacterised protein | |
| NCTC10437_02382 | 5 | 17 | 2.607049 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02377 | HTHFIS | 65 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02380 | GPOSANCHOR | 44 | 2e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02382 | IGASERPTASE | 32 | 0.004 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 26 | NCTC10437_02471 | NCTC10437_02476 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02471 | 3 | 12 | 1.096063 | transglutaminase domain-containing protein | |
| NCTC10437_02472 | 4 | 11 | 1.705272 | Uncharacterized protein conserved in bacteria | |
| NCTC10437_02473 | 2 | 14 | 2.431083 | dehydrogenase | |
| NCTC10437_02474 | 3 | 16 | 2.323418 | Uncharacterised protein | |
| NCTC10437_02475 | 3 | 15 | 1.951943 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_02476 | 3 | 17 | 1.991070 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02473 | DHBDHDRGNASE | 87 | 1e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02475 | DHBDHDRGNASE | 57 | 1e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02476 | cloacin | 40 | 2e-05 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 27 | NCTC10437_02559 | NCTC10437_02575 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02559 | 4 | 11 | 2.236439 | uncharacterized protein required for cytochrome | |
| NCTC10437_02560 | 3 | 10 | 2.031820 | TetR family transcriptional regulator | |
| NCTC10437_02561 | 1 | 9 | 0.636992 | Uncharacterised protein | |
| NCTC10437_02562 | -1 | 6 | 0.140542 | ABC transporter efflux protein, DrrB family | |
| NCTC10437_02563 | -2 | 8 | -0.492235 | ABC transporter-like protein | |
| NCTC10437_02564 | -3 | 7 | -0.608464 | integral membrane protein | |
| NCTC10437_02565 | -1 | 9 | -1.569609 | putative transcriptional regulator | |
| NCTC10437_02566 | 0 | 9 | -2.109796 | FeS assembly protein SufB | |
| NCTC10437_02567 | 1 | 7 | -1.316173 | FeS assembly protein SufD | |
| NCTC10437_02568 | 2 | 7 | -0.955066 | FeS assembly ATPase SufC | |
| NCTC10437_02569 | 2 | 8 | -0.675847 | Cysteine desulfurase Csd | |
| NCTC10437_02570 | 3 | 9 | -0.324680 | SUF system FeS assembly protein, NifU family | |
| NCTC10437_02571 | 2 | 10 | -0.567130 | putative metal-sulfur cluster biosynthetic | |
| NCTC10437_02572 | 2 | 9 | -0.197248 | putative taurine catabolism dioxygenase | |
| NCTC10437_02573 | 2 | 10 | -0.072917 | ATP-grasp enzyme, D-alanine-D-alanine ligase | |
| NCTC10437_02574 | 1 | 10 | -0.496985 | ATP-grasp domain protein | |
| NCTC10437_02575 | 2 | 13 | -0.461573 | putative O-methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02560 | HTHTETR | 62 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02568 | INTIMIN | 29 | 0.027 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 28 | NCTC10437_02741 | NCTC10437_02756 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02741 | 0 | 14 | -3.064737 | ferredoxin | |
| NCTC10437_02742 | 1 | 15 | -3.436879 | cyclohexanone monooxygenase | |
| NCTC10437_02743 | 1 | 18 | -3.428574 | NAD-dependent epimerase/dehydratase | |
| NCTC10437_02744 | 1 | 16 | -4.190830 | alpha/beta hydrolase fold protein | |
| NCTC10437_02745 | 0 | 18 | -4.572659 | acetaldehyde dehydrogenase | |
| NCTC10437_02746 | 0 | 18 | -4.720428 | 4-hydroxy-2-ketovalerate aldolase | |
| NCTC10437_02747 | 0 | 17 | -4.122245 | TetR family transcriptional regulator | |
| NCTC10437_02748 | 0 | 15 | -3.434445 | Uncharacterised protein | |
| NCTC10437_02749 | -1 | 14 | -2.686343 | RmlD substrate binding domain-containing | |
| NCTC10437_02750 | -1 | 14 | -2.404835 | major facilitator superfamily transporter | |
| NCTC10437_02751 | -1 | 13 | -0.515539 | GntR family transcriptional regulator | |
| NCTC10437_02752 | -1 | 12 | 0.012729 | short-chain dehydrogenase | |
| NCTC10437_02753 | 0 | 13 | -0.146084 | Uncharacterized protein conserved in bacteria | |
| NCTC10437_02754 | 2 | 15 | -0.383456 | 2-hydroxy-3-oxopropionate reductase | |
| NCTC10437_02755 | 2 | 16 | -0.830479 | Uncharacterised protein | |
| NCTC10437_02756 | 2 | 16 | -0.767790 | LuxR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02743 | DHBDHDRGNASE | 54 | 1e-10 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02747 | HTHTETR | 61 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02752 | DHBDHDRGNASE | 99 | 4e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 29 | NCTC10437_02884 | NCTC10437_02899 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02884 | 1 | 15 | -3.333873 | glycosyltransferase | |
| NCTC10437_02885 | 0 | 16 | -4.671295 | Uncharacterised protein | |
| NCTC10437_02886 | 0 | 16 | -4.710685 | Protein of uncharacterised function (DUF2505) | |
| NCTC10437_02887 | 1 | 18 | -6.013642 | MtfA protein | |
| NCTC10437_02888 | 2 | 20 | -5.262263 | NAD-dependent epimerase/dehydratase | |
| NCTC10437_02889 | 2 | 17 | -5.055751 | methyltransferase | |
| NCTC10437_02890 | 1 | 18 | -4.513275 | nucleoside-diphosphate-sugar epimerase | |
| NCTC10437_02891 | 1 | 19 | -4.132193 | nucleotide sugar dehydrogenase | |
| NCTC10437_02892 | 1 | 20 | -4.221319 | methyltransferase | |
| NCTC10437_02893 | 1 | 19 | -3.180648 | glycosyl transferase, | |
| NCTC10437_02894 | 1 | 19 | -3.578245 | glucose-methanol-choline oxidoreductase | |
| NCTC10437_02895 | 1 | 19 | -2.863052 | putative dehydrogenase | |
| NCTC10437_02896 | 0 | 16 | -2.501558 | putative dehydrogenase | |
| NCTC10437_02897 | 0 | 17 | -2.419895 | methyltransferase MtfC | |
| NCTC10437_02898 | -1 | 13 | -2.902508 | glycosyl transferase, | |
| NCTC10437_02899 | -1 | 14 | -3.821057 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02888 | NUCEPIMERASE | 121 | 5e-34 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02890 | NUCEPIMERASE | 215 | 5e-70 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02891 | ENTSNTHTASED | 29 | 0.035 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| 30 | NCTC10437_03015 | NCTC10437_03027 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03015 | 1 | 14 | 3.264925 | multidrug ABC transporter inner membrane | |
| NCTC10437_03016 | 1 | 14 | 3.445592 | multidrug ABC transporter inner membrane | |
| NCTC10437_03017 | 1 | 14 | 3.327492 | daunorubicin resistance ABC transporter ATPase | |
| NCTC10437_03018 | 1 | 13 | 3.508521 | beta-ketoacyl synthase | |
| NCTC10437_03019 | 1 | 13 | 3.396028 | beta-ketoacyl synthase | |
| NCTC10437_03020 | 1 | 12 | 2.998227 | polyketide synthase family protein | |
| NCTC10437_03021 | 0 | 12 | 2.540198 | beta-ketoacyl synthase | |
| NCTC10437_03022 | 0 | 12 | 1.983587 | acyl-CoA synthetase | |
| NCTC10437_03023 | 0 | 12 | 2.018922 | polyketide synthase family protein | |
| NCTC10437_03024 | 0 | 11 | 0.670026 | acyl-CoA synthetase | |
| NCTC10437_03025 | 0 | 11 | 0.764809 | thioesterase | |
| NCTC10437_03026 | 0 | 11 | 0.832985 | glycine dehydrogenase | |
| NCTC10437_03027 | 2 | 13 | -0.328204 | MerR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03015 | ABC2TRNSPORT | 30 | 0.011 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03019 | DHBDHDRGNASE | 34 | 0.004 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03020 | ISCHRISMTASE | 38 | 4e-04 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03023 | ISCHRISMTASE | 31 | 0.045 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 31 | NCTC10437_03088 | NCTC10437_03114 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03088 | 2 | 11 | 1.789292 | BadM/Rrf2 family transcriptional regulator | |
| NCTC10437_03089 | 2 | 10 | 2.004877 | Major facilitator superfamily MFS_1 | |
| NCTC10437_03090 | 1 | 11 | 1.917519 | secreted protein | |
| NCTC10437_03091 | 2 | 13 | 0.561343 | putative transcriptional regulator | |
| NCTC10437_03092 | 2 | 12 | 0.929855 | Uncharacterised protein | |
| NCTC10437_03093 | 3 | 13 | 1.001432 | glycosyltransferase | |
| NCTC10437_03094 | 3 | 14 | 0.599325 | UDP-N-acetylglucosamine:LPS N-acetylglucosamine | |
| NCTC10437_03095 | 2 | 16 | -0.240898 | sugar transferase | |
| NCTC10437_03096 | 4 | 18 | -0.793244 | ErfK/YbiS/YcfS/YnhG family protein | |
| NCTC10437_03097 | 2 | 18 | -0.585480 | Uncharacterised protein | |
| NCTC10437_03098 | 3 | 18 | -0.982310 | Gcn5-related N-acetyltransferase | |
| NCTC10437_03099 | 4 | 20 | -0.651847 | Allergen V5/Tpx-1 family protein | |
| NCTC10437_03100 | 5 | 19 | -0.567434 | Uncharacterised protein | |
| NCTC10437_03101 | 5 | 20 | 0.405304 | TIGR02391 family protein | |
| NCTC10437_03102 | 5 | 17 | 1.459257 | Uncharacterised protein | |
| NCTC10437_03103 | 5 | 20 | 1.873051 | Uncharacterised protein | |
| NCTC10437_03104 | 4 | 20 | 1.652899 | Mu-like prophage I protein | |
| NCTC10437_03105 | 4 | 18 | 1.769625 | Uncharacterised protein | |
| NCTC10437_03107 | 4 | 19 | 1.888510 | *Uncharacterised protein | |
| NCTC10437_03108 | 5 | 20 | 1.023436 | Uncharacterised protein | |
| NCTC10437_03109 | 5 | 23 | -0.902237 | Uncharacterised protein | |
| NCTC10437_03110 | 7 | 22 | -0.455930 | Uncharacterised protein | |
| NCTC10437_03111 | 5 | 22 | -0.918590 | Uncharacterised protein | |
| NCTC10437_03112 | 3 | 15 | -0.782789 | Uncharacterised protein | |
| NCTC10437_03113 | 2 | 11 | -0.732880 | Helix-turn-helix domain | |
| NCTC10437_03114 | 2 | 11 | -0.597587 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03089 | TCRTETB | 31 | 0.011 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03097 | PERTACTIN | 34 | 2e-04 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| 32 | NCTC10437_03172 | NCTC10437_03184 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03172 | 3 | 17 | 0.377219 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_03173 | 3 | 20 | 0.012485 | activator of Hsp90 ATPase 1 family protein | |
| NCTC10437_03174 | 3 | 21 | 0.157731 | arsR family transcriptional regulator | |
| NCTC10437_03175 | 2 | 11 | 0.465746 | tRNA/rRNA methyltransferase SpoU | |
| NCTC10437_03176 | 1 | 11 | -0.014546 | 50S ribosomal protein L20 | |
| NCTC10437_03177 | -1 | 10 | 0.123678 | 50S ribosomal protein L35 | |
| NCTC10437_03178 | -2 | 8 | 0.981952 | initiation factor 3 | |
| NCTC10437_03179 | -2 | 8 | 1.220278 | Uncharacterised protein | |
| NCTC10437_03180 | -1 | 9 | 1.354029 | lysyl-tRNA synthetase | |
| NCTC10437_03181 | 1 | 10 | 1.519910 | putative esterase | |
| NCTC10437_03182 | 1 | 11 | 1.646864 | phage shock protein A (IM30) | |
| NCTC10437_03183 | 2 | 12 | 1.851747 | Uncharacterised protein | |
| NCTC10437_03184 | 2 | 12 | 1.030170 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03172 | DHBDHDRGNASE | 76 | 2e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 33 | NCTC10437_03338 | NCTC10437_03352 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03338 | 2 | 8 | -1.109417 | BadM/Rrf2 family transcriptional regulator | |
| NCTC10437_03339 | 2 | 8 | -0.832807 | integral membrane protein | |
| NCTC10437_03340 | 4 | 11 | -0.780983 | Uncharacterised protein | |
| NCTC10437_03341 | 3 | 11 | -0.187138 | Uncharacterised protein | |
| NCTC10437_03342 | 2 | 11 | 0.162519 | vesicle-fusing ATPase | |
| NCTC10437_03343 | -1 | 10 | 2.452812 | low molecular weight antigen CFP2 | |
| NCTC10437_03344 | -2 | 9 | 2.674831 | putative lipoprotein LppK | |
| NCTC10437_03345 | -1 | 8 | 1.216651 | Protein of uncharacterised function (DUF503) | |
| NCTC10437_03346 | -2 | 9 | 0.848048 | tRNA(1-methyladenosine) methyltransferase-like | |
| NCTC10437_03347 | 0 | 10 | 0.244116 | recombinase B | |
| NCTC10437_03348 | 2 | 12 | -0.359243 | putative thioesterase-like superfamily protein | |
| NCTC10437_03349 | 2 | 11 | -0.450733 | DinB superfamily | |
| NCTC10437_03350 | 1 | 12 | -0.822812 | ribonucleotide reductase, beta subunit | |
| NCTC10437_03351 | 2 | 11 | -0.569778 | TetR family transcriptional regulator | |
| NCTC10437_03352 | 2 | 11 | -0.216927 | mercuric reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03344 | PF06872 | 28 | 0.027 | EspG protein | |
>PF06872#EspG protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03351 | HTHTETR | 70 | 1e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 34 | NCTC10437_03394 | NCTC10437_03417 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03394 | 2 | 8 | -1.409324 | signal transduction histidine kinase regulating | |
| NCTC10437_03395 | 1 | 8 | -1.549615 | response regulator receiver/uncharacterised | |
| NCTC10437_03396 | 1 | 8 | -1.583960 | chitinase, cellulase | |
| NCTC10437_03397 | 0 | 10 | 0.057277 | beta-lactamase | |
| NCTC10437_03398 | 2 | 12 | 0.503090 | glutamine amidotransferase | |
| NCTC10437_03399 | 2 | 14 | 0.751203 | TIGR01777 family protein | |
| NCTC10437_03400 | 3 | 15 | 0.182687 | phosphoribosyltransferase | |
| NCTC10437_03401 | 1 | 14 | 0.556072 | transmembrane protein | |
| NCTC10437_03402 | 0 | 11 | 1.115632 | DivIVA domain protein | |
| NCTC10437_03403 | 0 | 8 | 1.851225 | transmembrane protein | |
| NCTC10437_03404 | 0 | 7 | 2.460276 | cell division protein sepF | |
| NCTC10437_03405 | 0 | 6 | 2.778768 | alanine racemase domain-containing protein | |
| NCTC10437_03406 | 0 | 8 | 2.722906 | uncharacterized protein, YfiH family | |
| NCTC10437_03407 | -1 | 7 | 3.055185 | cell division protein ftsZ | |
| NCTC10437_03408 | -1 | 7 | 2.780055 | polypeptide-transport-associated | |
| NCTC10437_03409 | 0 | 7 | 2.616402 | UDP-N-acetylmuramate--L-alanine ligase | |
| NCTC10437_03410 | 0 | 9 | 3.057588 | undecaprenyldiphospho-muramoylpentapeptide | |
| NCTC10437_03411 | -1 | 8 | 2.259912 | cell division protein FtsW | |
| NCTC10437_03412 | -2 | 9 | 2.723081 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate | |
| NCTC10437_03413 | 0 | 8 | 1.902443 | Phospho-N-acetylmuramoyl-pentapeptide- | |
| NCTC10437_03414 | 0 | 9 | 1.959609 | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, | |
| NCTC10437_03415 | 2 | 11 | 1.513480 | UDP-N-acetylmuramoylalanyl-D-glutamate--2, | |
| NCTC10437_03416 | 2 | 12 | 0.271647 | peptidoglycan glycosyltransferase | |
| NCTC10437_03417 | 3 | 10 | 0.961761 | FHA domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03394 | PF06580 | 40 | 2e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03395 | HTHFIS | 79 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03396 | FLAGELLIN | 35 | 0.006 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03399 | NUCEPIMERASE | 43 | 2e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03402 | RTXTOXIND | 34 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03405 | ALARACEMASE | 29 | 0.028 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03408 | PF05616 | 32 | 0.003 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03417 | PERTACTIN | 35 | 4e-04 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| 35 | NCTC10437_03453 | NCTC10437_03464 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03453 | 0 | 12 | 3.818743 | membrane protein | |
| NCTC10437_03454 | -1 | 11 | 3.203726 | Iron-sulfur cluster assembly accessory protein | |
| NCTC10437_03455 | -1 | 10 | 3.214721 | glycerate kinase | |
| NCTC10437_03456 | -1 | 10 | 2.266009 | Protein of uncharacterised function (DUF3043) | |
| NCTC10437_03457 | 0 | 8 | 2.238511 | nicotinate-nucleotide--dimethylbenzimidazole | |
| NCTC10437_03458 | 0 | 8 | 1.027620 | cobalamin synthase | |
| NCTC10437_03459 | 1 | 8 | 0.466442 | branched-chain amino acid aminotransferase, | |
| NCTC10437_03460 | 2 | 9 | 0.572856 | glycine cleavage system aminomethyltransferase | |
| NCTC10437_03461 | 2 | 9 | 0.492887 | leucyl aminopeptidase | |
| NCTC10437_03462 | 2 | 10 | 0.546031 | short-chain dehydrogenase of uncharacterised | |
| NCTC10437_03463 | 2 | 11 | -0.033609 | alkaline phosphatase | |
| NCTC10437_03464 | 2 | 11 | 0.305061 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03462 | DHBDHDRGNASE | 108 | 1e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 36 | NCTC10437_03914 | NCTC10437_03929 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03914 | 2 | 15 | -2.650244 | 6-phosphogluconate dehydrogenase | |
| NCTC10437_03915 | 2 | 14 | -3.665764 | 6-phosphogluconate dehydrogenase | |
| NCTC10437_03916 | 2 | 16 | -4.082583 | cytochrome P450 | |
| NCTC10437_03917 | 1 | 16 | -2.968794 | ferredoxin | |
| NCTC10437_03918 | 1 | 14 | -2.729478 | Uncharacterized conserved protein | |
| NCTC10437_03919 | 1 | 13 | -3.348010 | ferredoxin | |
| NCTC10437_03920 | 0 | 13 | -3.072577 | cytochrome P450 | |
| NCTC10437_03921 | 0 | 11 | -3.062507 | carboxymuconolactone decarboxylase | |
| NCTC10437_03922 | 0 | 10 | -3.189316 | taurine catabolism dioxygenase TauD/TfdA | |
| NCTC10437_03923 | -2 | 9 | -2.713265 | Xaa-Pro dipeptidase | |
| NCTC10437_03924 | -1 | 9 | -2.862542 | Rieske (2Fe-2S) domain-containing protein | |
| NCTC10437_03925 | -1 | 10 | -3.096890 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_03926 | -1 | 10 | -2.183487 | ferredoxin | |
| NCTC10437_03927 | 0 | 11 | -2.134413 | MarR family transcriptional regulator | |
| NCTC10437_03928 | -1 | 10 | -2.940240 | amidohydrolase | |
| NCTC10437_03929 | 1 | 11 | -3.359181 | Xaa-Pro dipeptidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03925 | DHBDHDRGNASE | 132 | 7e-40 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 37 | NCTC10437_04065 | NCTC10437_04072 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04065 | 4 | 15 | -1.227808 | ATP:cob(I)alamin adenosyltransferase | |
| NCTC10437_04066 | 6 | 16 | -0.575532 | Protein of uncharacterised function (DUF2550) | |
| NCTC10437_04067 | 6 | 16 | -0.901999 | ATP synthase, F1 epsilon subunit | |
| NCTC10437_04068 | 5 | 17 | -0.896754 | ATP synthase F1 subunit beta | |
| NCTC10437_04069 | 5 | 14 | -1.466347 | ATP synthase F1 subcomplex gamma subunit | |
| NCTC10437_04070 | 5 | 14 | -2.057079 | ATP synthase F1 subcomplex alpha subunit | |
| NCTC10437_04071 | 3 | 9 | -1.411329 | ATP synthase subunit H | |
| NCTC10437_04072 | 2 | 7 | -1.707412 | F0F1 ATP synthase subunit B |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04072 | IGASERPTASE | 27 | 0.036 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 38 | NCTC10437_04087 | NCTC10437_04107 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04087 | 2 | 15 | -2.847512 | threonine synthase | |
| NCTC10437_04088 | 4 | 17 | -3.544738 | homoserine dehydrogenase | |
| NCTC10437_04089 | 5 | 26 | -6.547550 | diaminopimelate decarboxylase | |
| NCTC10437_04090 | 8 | 36 | -9.304345 | arginyl-tRNA synthetase | |
| NCTC10437_04092 | 10 | 59 | -14.546154 | *Uncharacterised protein | |
| NCTC10437_04093 | 9 | 58 | -13.804592 | Uncharacterised protein | |
| NCTC10437_04094 | 9 | 57 | -13.388310 | Uncharacterised protein | |
| NCTC10437_04095 | 9 | 57 | -13.705935 | Putative bacteriophage protein | |
| NCTC10437_04096 | 9 | 56 | -13.726782 | Uncharacterised protein | |
| NCTC10437_04097 | 9 | 55 | -13.160430 | Uncharacterised protein | |
| NCTC10437_04098 | 8 | 54 | -12.955722 | bacteriophage protein | |
| NCTC10437_04099 | 7 | 45 | -10.937605 | Uncharacterised protein | |
| NCTC10437_04100 | 5 | 39 | -9.731389 | Uncharacterised protein | |
| NCTC10437_04101 | 2 | 29 | -6.119276 | Uncharacterised protein | |
| NCTC10437_04102 | 1 | 22 | -3.934049 | phage integrase family protein | |
| NCTC10437_04103 | 1 | 14 | -1.146032 | Uncharacterised protein | |
| NCTC10437_04104 | 0 | 13 | 0.241113 | MspA protein | |
| NCTC10437_04105 | 1 | 16 | 0.081589 | Uncharacterised protein | |
| NCTC10437_04106 | 0 | 13 | 0.030527 | pyruvate/2-oxoglutarate dehydrogenase complex, | |
| NCTC10437_04107 | 2 | 13 | 0.185582 | Uncharacterised protein |
| 39 | NCTC10437_04122 | NCTC10437_04145 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04122 | 2 | 10 | 0.266069 | C4-dicarboxylate transporter/malic acid | |
| NCTC10437_04123 | 0 | 8 | 0.634152 | integral membrane sensor signal transduction | |
| NCTC10437_04124 | 0 | 9 | 0.930567 | two component LuxR family transcriptional | |
| NCTC10437_04125 | 1 | 9 | 1.022609 | Uncharacterised protein | |
| NCTC10437_04126 | -1 | 10 | 1.076879 | transposase | |
| NCTC10437_04127 | -1 | 7 | 2.134926 | transposase | |
| NCTC10437_04128 | -1 | 9 | 0.923500 | amine oxidase | |
| NCTC10437_04129 | 2 | 16 | -0.369189 | 2-nitropropane dioxygenase | |
| NCTC10437_04130 | 4 | 24 | -4.593014 | glyoxalase/bleomycin resistance | |
| NCTC10437_04131 | 6 | 28 | -5.296588 | BadM/Rrf2 family transcriptional regulator | |
| NCTC10437_04132 | 6 | 34 | -6.685855 | nicotinamidase-like amidase | |
| NCTC10437_04133 | 6 | 35 | -6.520543 | Uncharacterised protein | |
| NCTC10437_04134 | 4 | 34 | -6.320915 | Uncharacterised protein | |
| NCTC10437_04135 | 5 | 33 | -5.688529 | Putative bacteriophage protein | |
| NCTC10437_04136 | 6 | 33 | -4.838566 | Uncharacterised protein | |
| NCTC10437_04137 | 5 | 34 | -4.546279 | Uncharacterised protein | |
| NCTC10437_04138 | 5 | 32 | -4.306281 | Gp153 | |
| NCTC10437_04139 | 8 | 30 | -4.968036 | Gp153 | |
| NCTC10437_04140 | 11 | 34 | -6.807959 | Uncharacterised protein | |
| NCTC10437_04141 | 10 | 34 | -7.494808 | Y4cG protein | |
| NCTC10437_04142 | 7 | 30 | -6.798270 | Uncharacterised protein | |
| NCTC10437_04143 | 7 | 25 | -5.317386 | Uncharacterised protein | |
| NCTC10437_04144 | 4 | 16 | -4.343296 | phage integrase family protein | |
| NCTC10437_04145 | 2 | 11 | -3.755119 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04124 | HTHFIS | 53 | 3e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 40 | NCTC10437_04234 | NCTC10437_04239 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04234 | 3 | 12 | -0.100184 | Conserved exported protein of uncharacterised | |
| NCTC10437_04235 | 3 | 12 | 0.036336 | DNA-3-methyladenine glycosylase I | |
| NCTC10437_04236 | 2 | 10 | 1.517509 | DivIVA domain-containing protein | |
| NCTC10437_04237 | 2 | 10 | 1.390035 | glycosyl transferase | |
| NCTC10437_04238 | 2 | 10 | 1.764009 | dihydropteroate synthase | |
| NCTC10437_04239 | 2 | 10 | 1.512077 | long-chain-acyl-CoA synthetase |
| 41 | NCTC10437_04272 | NCTC10437_04284 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04272 | 2 | 20 | -1.078022 | Uncharacterised protein | |
| NCTC10437_04273 | 0 | 16 | 0.256685 | Uncharacterised protein | |
| NCTC10437_04274 | 0 | 17 | 1.880435 | Uncharacterised protein | |
| NCTC10437_04275 | 1 | 16 | 3.177530 | Uncharacterised protein | |
| NCTC10437_04276 | 2 | 16 | 2.989586 | ADP-ribose pyrophosphatase | |
| NCTC10437_04277 | 2 | 14 | 2.570333 | pterin-4-alpha-carbinolamine dehydratase | |
| NCTC10437_04278 | 3 | 13 | 2.801908 | mannosyltransferase | |
| NCTC10437_04279 | 3 | 15 | 2.812542 | Uncharacterised protein | |
| NCTC10437_04280 | 1 | 13 | 1.353015 | conserved alanine and proline rich protein | |
| NCTC10437_04281 | 2 | 14 | -1.336577 | Protein of uncharacterised function (DUF1059) | |
| NCTC10437_04282 | 1 | 13 | -0.460137 | nitroreductase | |
| NCTC10437_04283 | 1 | 14 | -0.536928 | site-specific recombinase, DNA invertase Pin | |
| NCTC10437_04284 | 2 | 13 | -0.308515 | HhH-GPD family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04276 | SHAPEPROTEIN | 26 | 0.039 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04279 | SALSPVBPROT | 29 | 0.017 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04280 | PF05616 | 42 | 2e-06 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| 42 | NCTC10437_04427 | NCTC10437_04433 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04427 | 0 | 10 | -3.236006 | Cytochrome D1 heme domain protein | |
| NCTC10437_04428 | 2 | 10 | -4.504856 | anti-sigma-factor antagonist | |
| NCTC10437_04429 | 1 | 10 | -3.671636 | anti-sigma-factor antagonist | |
| NCTC10437_04430 | 1 | 10 | -3.275751 | Protein of uncharacterised function (DUF732) | |
| NCTC10437_04431 | 1 | 10 | -3.576885 | polar amino acid ABC transporter inner membrane | |
| NCTC10437_04432 | 1 | 10 | -1.728651 | ABC transporter-like protein | |
| NCTC10437_04433 | 2 | 13 | -0.770217 | Uncharacterised protein |
| 43 | NCTC10437_04462 | NCTC10437_04468 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04462 | 1 | 16 | -3.094690 | universal stress protein UspA-like protein | |
| NCTC10437_04463 | 1 | 17 | -3.848021 | amino acid permease-associated protein | |
| NCTC10437_04464 | 2 | 23 | -4.030028 | protein of uncharacterised function DUF222 | |
| NCTC10437_04465 | 6 | 18 | -3.359691 | Protein of uncharacterised function (DUF3303) | |
| NCTC10437_04466 | 1 | 13 | -3.274350 | deazaflavin-dependent nitroreductase family | |
| NCTC10437_04468 | 0 | 13 | -3.292340 | *UsfY protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04465 | STREPKINASE | 25 | 0.042 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04466 | FbpA_PF05833 | 27 | 0.031 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| 44 | NCTC10437_04767 | NCTC10437_04801 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04767 | 2 | 8 | 0.113501 | Protein of uncharacterised function (DUF3027) | |
| NCTC10437_04768 | 1 | 10 | -0.808607 | major facilitator superfamily transporter | |
| NCTC10437_04769 | 0 | 11 | -0.616700 | Protein of uncharacterised function (DUF2771) | |
| NCTC10437_04770 | -1 | 11 | -0.491040 | putative glutathione S-transferase | |
| NCTC10437_04771 | 1 | 12 | 2.534865 | cullin, a subunit of E3 ubiquitin ligase | |
| NCTC10437_04772 | 0 | 11 | 3.059543 | cold shock protein | |
| NCTC10437_04773 | -1 | 12 | 3.198157 | cold-shock protein | |
| NCTC10437_04774 | -2 | 11 | 3.461811 | molybdenum cofactor biosynthesis protein A | |
| NCTC10437_04775 | -1 | 15 | 3.695861 | molybdopterin converting factor, small subunit | |
| NCTC10437_04777 | -1 | 11 | 3.800475 | transglycosylase-like protein | |
| NCTC10437_04778 | 1 | 11 | 1.207167 | molybdopterin biosynthesis MoaE | |
| NCTC10437_04779 | 0 | 8 | 0.684886 | molybdopterin adenylyltransferase | |
| NCTC10437_04780 | 0 | 9 | 0.484210 | molybdenum cofactor biosynthesis protein MoaC | |
| NCTC10437_04781 | 0 | 10 | 0.227178 | Uncharacterised protein | |
| NCTC10437_04782 | 0 | 9 | 0.121673 | DNA-binding protein | |
| NCTC10437_04783 | 0 | 9 | -0.774962 | WD40 domain-containing protein | |
| NCTC10437_04784 | 2 | 8 | -0.837124 | DNA or RNA helicase of superfamily protein II | |
| NCTC10437_04785 | 1 | 10 | -0.699835 | lactoylglutathione lyase family protein | |
| NCTC10437_04786 | 0 | 10 | -1.111348 | luciferase family protein | |
| NCTC10437_04787 | 0 | 12 | -0.913880 | pyridoxamine 5'-phosphate oxidase-like protein | |
| NCTC10437_04788 | 0 | 12 | -0.887405 | AMP-dependent synthetase and ligase | |
| NCTC10437_04789 | -1 | 13 | -1.071725 | transcriptional regulator containing an amidase | |
| NCTC10437_04790 | 1 | 12 | -1.223568 | Uncharacterised protein | |
| NCTC10437_04791 | 2 | 10 | -1.413486 | 3-hydroxyacyl-CoA dehydrogenase | |
| NCTC10437_04792 | 1 | 8 | -1.345624 | acetyl-CoA acetyltransferase | |
| NCTC10437_04793 | 1 | 12 | -1.478373 | Uncharacterised protein | |
| NCTC10437_04794 | 1 | 11 | -1.542931 | NADH:flavin oxidoreductase | |
| NCTC10437_04795 | 2 | 12 | -1.981771 | Putative dihydrolipoamide s-acetyltransferase | |
| NCTC10437_04796 | 1 | 11 | -2.417731 | pyruvate/2-oxoglutarate dehydrogenase complex, | |
| NCTC10437_04797 | 0 | 11 | -2.758765 | lactoylglutathione lyase-like lyase | |
| NCTC10437_04798 | 0 | 11 | -2.727279 | GntR family transcriptional regulator | |
| NCTC10437_04799 | 1 | 11 | -3.012671 | succinate-semialdehyde dehydrogenase [NADP+] 1 | |
| NCTC10437_04800 | 1 | 10 | -2.917886 | carboxymuconolactone decarboxylase | |
| NCTC10437_04801 | 1 | 9 | -3.233570 | peptidase M24 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04777 | PERTACTIN | 36 | 4e-04 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04783 | INTIMIN | 38 | 3e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04791 | adhesinmafb | 30 | 0.042 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 45 | NCTC10437_04912 | NCTC10437_04920 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04912 | 2 | 13 | -1.638990 | Uncharacterised protein | |
| NCTC10437_04913 | 1 | 12 | -1.656826 | Uncharacterised protein | |
| NCTC10437_04914 | 1 | 11 | -1.677088 | carboxymuconolactone decarboxylase | |
| NCTC10437_04915 | 1 | 12 | -1.191016 | 6-phosphogluconate dehydrogenase | |
| NCTC10437_04916 | 2 | 11 | -2.105797 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_04917 | 2 | 10 | -2.001875 | aldehyde dehydrogenase | |
| NCTC10437_04918 | 2 | 12 | -3.362638 | TetR family transcriptional regulator | |
| NCTC10437_04919 | 2 | 14 | -3.202020 | cytochrome P450 | |
| NCTC10437_04920 | 2 | 13 | -3.103402 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04916 | DHBDHDRGNASE | 127 | 1e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04918 | HTHTETR | 52 | 2e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04920 | DHBDHDRGNASE | 117 | 8e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 46 | NCTC10437_05016 | NCTC10437_05034 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05016 | 2 | 13 | -2.681619 | deazaflavin-dependent nitroreductase family | |
| NCTC10437_05017 | 1 | 12 | -2.464378 | GAF domain-containing protein | |
| NCTC10437_05018 | 0 | 13 | -1.496302 | short-chain dehydrogenase | |
| NCTC10437_05019 | 0 | 13 | -1.356579 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_05020 | 0 | 13 | -1.416125 | enoyl-CoA hydratase/isomerase | |
| NCTC10437_05021 | 1 | 13 | -1.796753 | coenzyme A transferase | |
| NCTC10437_05022 | 2 | 11 | -1.883657 | acyl CoA:acetate/3-ketoacid CoA transferase | |
| NCTC10437_05023 | 2 | 13 | -2.189216 | 2-nitropropane dioxygenase-like enzyme | |
| NCTC10437_05024 | 2 | 15 | -3.258200 | oxidoreductase, Rxyl_3153 family | |
| NCTC10437_05025 | 1 | 20 | -4.111740 | acetyl-CoA acetyltransferase | |
| NCTC10437_05026 | 1 | 24 | -4.624168 | transcriptional regulator | |
| NCTC10437_05027 | 2 | 25 | -3.999527 | dehydrogenase | |
| NCTC10437_05028 | 2 | 24 | -4.559499 | putative dehydrogenase | |
| NCTC10437_05029 | 2 | 23 | -4.512217 | membrane protein involved in the export of | |
| NCTC10437_05030 | 2 | 23 | -4.347163 | putative glycosyltransferase | |
| NCTC10437_05031 | 1 | 20 | -4.078849 | Lipid A core - O-antigen ligase and related | |
| NCTC10437_05032 | 1 | 21 | -3.674615 | cellobiohydrolase A | |
| NCTC10437_05033 | 2 | 21 | -3.722261 | Uncharacterised protein | |
| NCTC10437_05034 | 1 | 21 | -3.105761 | glycosyl transferase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05018 | DHBDHDRGNASE | 73 | 3e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05019 | DHBDHDRGNASE | 100 | 2e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05026 | HTHTETR | 85 | 1e-22 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05027 | NUCEPIMERASE | 44 | 6e-07 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 47 | NCTC10437_05155 | NCTC10437_05178 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05155 | 2 | 11 | 2.625919 | DEAD/DEAH box helicase | |
| NCTC10437_05156 | 2 | 14 | 1.027209 | Uncharacterised protein | |
| NCTC10437_05157 | 5 | 24 | -0.543397 | protein kinase | |
| NCTC10437_05158 | 5 | 28 | -1.721052 | helicase/secretion neighborhood TadE-like | |
| NCTC10437_05159 | 4 | 32 | -4.286254 | Conserved exported protein of uncharacterised | |
| NCTC10437_05160 | 6 | 36 | -5.832367 | Uncharacterised protein | |
| NCTC10437_05161 | 5 | 34 | -5.313513 | Uncharacterised protein | |
| NCTC10437_05162 | 5 | 30 | -5.261423 | Uncharacterised protein | |
| NCTC10437_05163 | 3 | 22 | -2.732188 | Uncharacterised protein | |
| NCTC10437_05164 | 4 | 22 | -2.829018 | Uncharacterised protein | |
| NCTC10437_05165 | 3 | 21 | -2.625615 | Uncharacterised protein | |
| NCTC10437_05166 | 4 | 20 | -2.422327 | putative transcriptional regulator | |
| NCTC10437_05167 | 6 | 23 | -3.098147 | Uncharacterised protein | |
| NCTC10437_05168 | 5 | 23 | -2.726104 | phage capsid protein | |
| NCTC10437_05169 | 5 | 26 | -3.208162 | Uncharacterised protein | |
| NCTC10437_05170 | 7 | 29 | -5.064256 | Uncharacterised protein | |
| NCTC10437_05171 | 9 | 26 | -4.411142 | Uncharacterised protein | |
| NCTC10437_05172 | 9 | 26 | -4.551939 | Uncharacterised protein | |
| NCTC10437_05173 | 8 | 24 | -3.050715 | Uncharacterised protein | |
| NCTC10437_05174 | 5 | 21 | -1.317759 | Uncharacterised protein | |
| NCTC10437_05175 | 4 | 18 | 0.145287 | Uncharacterised protein | |
| NCTC10437_05176 | 2 | 15 | 2.516766 | phague integrase | |
| NCTC10437_05177 | 1 | 12 | 3.416889 | Uncharacterised protein | |
| NCTC10437_05178 | 1 | 12 | 4.025556 | type II secretion system protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05157 | YERSSTKINASE | 37 | 2e-04 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05169 | PF01206 | 26 | 0.026 | SirA family protein | |
>PF01206#SirA family protein | |||||
| 48 | NCTC10437_05201 | NCTC10437_05208 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05201 | 2 | 16 | -3.369969 | glycosyl transferase family protein | |
| NCTC10437_05202 | 2 | 22 | -4.797056 | metallophosphoesterase | |
| NCTC10437_05203 | -1 | 22 | -4.543465 | pyridoxal-5'-phosphate-dependent enzyme subunit | |
| NCTC10437_05204 | 0 | 25 | -4.981931 | Uncharacterised protein | |
| NCTC10437_05206 | -1 | 24 | -4.761449 | *Uncharacterised protein | |
| NCTC10437_05207 | -1 | 22 | -4.194649 | Uncharacterised protein | |
| NCTC10437_05208 | -2 | 20 | -3.042868 | pyridoxamine 5'-phosphate oxidase-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05201 | TONBPROTEIN | 41 | 1e-05 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 49 | NCTC10437_05436 | NCTC10437_05442 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05436 | 2 | 13 | -0.625035 | putative phage repressor | |
| NCTC10437_05437 | 3 | 11 | 0.735911 | superoxide dismutase, Ni | |
| NCTC10437_05438 | 4 | 12 | 1.566777 | Uncharacterised protein | |
| NCTC10437_05439 | 3 | 13 | 2.068560 | Helix-turn-helix protein | |
| NCTC10437_05440 | 4 | 13 | 2.800580 | Uncharacterised protein | |
| NCTC10437_05441 | 3 | 14 | 2.300062 | Uncharacterised protein | |
| NCTC10437_05442 | 2 | 13 | 2.178605 | Uncharacterised protein |
| 50 | NCTC10437_05458 | NCTC10437_05472 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05458 | 2 | 17 | -0.781300 | 3-hydroxyacyl-CoA dehydrogenase | |
| NCTC10437_05459 | 2 | 15 | -0.530858 | gluconate permease | |
| NCTC10437_05460 | 1 | 13 | -0.387803 | Luciferase-like protein | |
| NCTC10437_05461 | 2 | 12 | -0.205334 | response regulator containing a CheY-like | |
| NCTC10437_05462 | 4 | 15 | -0.282076 | putative outer membrane adhesin like protein | |
| NCTC10437_05463 | -1 | 12 | -0.675058 | Uncharacterised protein | |
| NCTC10437_05464 | -1 | 11 | -0.020082 | NADH/NADPH-dependent glutamate synthase small | |
| NCTC10437_05465 | -1 | 10 | 0.039409 | glutamate synthase (NADH) large subunit | |
| NCTC10437_05466 | 0 | 9 | 1.784805 | thioesterase superfamily protein | |
| NCTC10437_05467 | 0 | 10 | 1.786761 | MIP family channel protein | |
| NCTC10437_05468 | 0 | 12 | 1.903480 | Ferritin, Dps family protein | |
| NCTC10437_05469 | 0 | 12 | 1.909759 | 3-methyladenine DNA glycosylase | |
| NCTC10437_05470 | 2 | 11 | 1.472821 | short-chain dehydrogenase of uncharacterised | |
| NCTC10437_05471 | 1 | 10 | 1.270451 | FAD dependent oxidoreductase | |
| NCTC10437_05472 | 2 | 10 | 0.017965 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05462 | TONBPROTEIN | 35 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05468 | HELNAPAPROT | 111 | 1e-33 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| 51 | NCTC10437_05693 | NCTC10437_05708 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05693 | 2 | 14 | -0.555288 | putative F420-dependent oxidoreductase, | |
| NCTC10437_05694 | 1 | 18 | -0.940703 | Uncharacterised protein | |
| NCTC10437_05695 | 1 | 17 | -0.854528 | Complex I intermediate-associated protein 30 | |
| NCTC10437_05696 | 2 | 20 | -1.854466 | Uncharacterised protein | |
| NCTC10437_05697 | 2 | 19 | -1.959710 | Uncharacterised protein | |
| NCTC10437_05698 | 0 | 17 | -2.515138 | major facilitator superfamily protein | |
| NCTC10437_05699 | -1 | 20 | -3.088035 | flavin-dependent oxidoreductase, F420-dependent | |
| NCTC10437_05700 | -2 | 17 | -3.114985 | Predicted flavin-nucleotide-binding protein | |
| NCTC10437_05701 | -2 | 17 | -3.155978 | alpha/beta hydrolase fold protein | |
| NCTC10437_05702 | -2 | 15 | -2.127616 | aldo/keto reductase | |
| NCTC10437_05703 | 0 | 16 | -2.210830 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_05704 | -1 | 10 | -1.699778 | TetR family transcriptional regulator | |
| NCTC10437_05705 | -1 | 9 | -1.666392 | MerR family transcriptional regulator | |
| NCTC10437_05706 | 0 | 10 | -1.552872 | Uncharacterised protein | |
| NCTC10437_05707 | 2 | 12 | -1.108661 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_05708 | 2 | 13 | -1.608844 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05698 | TCRTETB | 43 | 2e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05702 | INTIMIN | 31 | 0.007 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05703 | DHBDHDRGNASE | 116 | 1e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05704 | HTHTETR | 47 | 7e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05707 | DHBDHDRGNASE | 79 | 2e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 52 | NCTC10437_05718 | NCTC10437_05728 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05718 | 2 | 15 | -1.525395 | protein of uncharacterised function (DUF1707) | |
| NCTC10437_05719 | 2 | 15 | -1.573641 | putative transcriptional regulator | |
| NCTC10437_05720 | 1 | 12 | -0.821079 | inositol 1-phosphate synthase | |
| NCTC10437_05721 | 0 | 11 | 0.002349 | Uncharacterised protein | |
| NCTC10437_05722 | 0 | 10 | -0.058640 | alphabeta hydrolase family protein | |
| NCTC10437_05723 | 2 | 8 | -0.923232 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_05724 | 2 | 7 | -0.787709 | TetR family transcriptional regulator | |
| NCTC10437_05725 | 2 | 7 | -0.794427 | acetyltransferase | |
| NCTC10437_05726 | 3 | 8 | -1.169979 | alpha/beta hydrolase fold protein | |
| NCTC10437_05727 | 1 | 7 | -1.306058 | WD40 domain-containing protein | |
| NCTC10437_05728 | 2 | 7 | -1.148102 | WD40 domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05723 | DHBDHDRGNASE | 119 | 1e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05724 | HTHTETR | 48 | 4e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05726 | NEISSPPORIN | 28 | 0.042 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05727 | IGASERPTASE | 32 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05728 | TONBPROTEIN | 34 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 53 | NCTC10437_00022 | NCTC10437_00030 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00022 | 2 | 13 | 0.692075 | protein kinase | |
| NCTC10437_00023 | 2 | 13 | 0.533865 | penicillin-binding transpeptidase | |
| NCTC10437_00024 | 1 | 13 | 0.552325 | cell cycle protein | |
| NCTC10437_00025 | 1 | 13 | 1.378944 | protein phosphatase 2C domain-containing | |
| NCTC10437_00026 | 2 | 13 | 0.240367 | FHA domain-containing protein | |
| NCTC10437_00027 | 2 | 12 | 0.991314 | FHA domain-containing protein | |
| NCTC10437_00029 | 1 | 12 | 1.074154 | *TetR family transcriptional regulator | |
| NCTC10437_00030 | 2 | 13 | 1.207065 | short-chain dehydrogenase/reductase SDR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00022 | YERSSTKINASE | 33 | 0.002 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00025 | PF03544 | 41 | 6e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00029 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00030 | DHBDHDRGNASE | 67 | 3e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 54 | NCTC10437_00170 | NCTC10437_00177 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00170 | -2 | 8 | 1.204709 | dihydroflavonol 4-reductase | |
| NCTC10437_00171 | 0 | 9 | 1.202344 | Zn-dependent oxidoreductase, NADPH:quinone | |
| NCTC10437_00172 | 0 | 8 | 0.707974 | transcriptional regulator | |
| NCTC10437_00173 | -1 | 10 | 0.682477 | Acyltransferase-like protein | |
| NCTC10437_00174 | 1 | 11 | 1.441948 | TetR family transcriptional regulator | |
| NCTC10437_00175 | 2 | 13 | 0.924797 | PMT family glycosyltransferase, | |
| NCTC10437_00176 | 4 | 15 | 0.952829 | Uncharacterised protein | |
| NCTC10437_00177 | 2 | 16 | 3.043807 | dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00170 | NUCEPIMERASE | 62 | 7e-13 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00172 | SECA | 28 | 0.030 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00174 | HTHTETR | 49 | 1e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00175 | PERTACTIN | 30 | 0.027 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00177 | DHBDHDRGNASE | 75 | 2e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 55 | NCTC10437_00193 | NCTC10437_00199 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00193 | 0 | 9 | 2.514975 | two-component regulator receiver | |
| NCTC10437_00194 | -1 | 9 | 2.566489 | two-component regulator - sensor kinase | |
| NCTC10437_00195 | -1 | 8 | 1.977783 | S-adenosyl-L-methionine-dependent methyl | |
| NCTC10437_00196 | 0 | 10 | 2.281206 | ErfK/YbiS/YcfS/YnhG family protein | |
| NCTC10437_00197 | 2 | 12 | 2.748988 | Uncharacterised protein | |
| NCTC10437_00198 | 2 | 11 | 2.158600 | Uncharacterised protein | |
| NCTC10437_00199 | 0 | 9 | 1.221945 | MoxR-like ATPase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00193 | HTHFIS | 73 | 3e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00194 | PF05616 | 34 | 0.002 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00196 | PF03544 | 38 | 3e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00197 | ACRIFLAVINRP | 29 | 0.035 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00199 | HTHFIS | 35 | 3e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 56 | NCTC10437_00208 | NCTC10437_00218 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00208 | 1 | 11 | 1.020599 | MmpL11 | |
| NCTC10437_00209 | 0 | 9 | 1.262971 | Fis family transcriptional regulator | |
| NCTC10437_00210 | 1 | 10 | 0.932000 | membrane protein | |
| NCTC10437_00211 | 1 | 9 | 0.705447 | response regulator with CheY-like receiver | |
| NCTC10437_00212 | 0 | 9 | 0.339440 | integral membrane sensor signal transduction | |
| NCTC10437_00213 | 0 | 9 | 0.249765 | Protein of uncharacterised function (DUF3054) | |
| NCTC10437_00214 | 0 | 9 | 0.091940 | metalloendopeptidase-like membrane protein | |
| NCTC10437_00215 | 0 | 11 | 0.465447 | putative integral membrane protein | |
| NCTC10437_00216 | -1 | 10 | 1.025459 | permease | |
| NCTC10437_00217 | -2 | 10 | 1.919767 | NAD-dependent aldehyde dehydrogenase | |
| NCTC10437_00218 | -1 | 10 | 1.862507 | large membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00208 | ACRIFLAVINRP | 59 | 5e-11 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00210 | RTXTOXINA | 27 | 0.025 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00211 | HTHFIS | 96 | 2e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00212 | PF06580 | 39 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00215 | PF05616 | 38 | 4e-05 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00218 | ACRIFLAVINRP | 72 | 9e-15 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 57 | NCTC10437_00267 | NCTC10437_00274 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00267 | -1 | 8 | 1.550465 | Uncharacterised protein | |
| NCTC10437_00268 | -1 | 8 | 1.129432 | acyl-CoA dehydrogenase | |
| NCTC10437_00269 | -2 | 6 | 1.193119 | dihydrodipicolinate reductase | |
| NCTC10437_00270 | -2 | 6 | 1.110059 | short-chain alcohol dehydrogenase | |
| NCTC10437_00271 | -3 | 6 | 1.078712 | TspO and MBR like proteins | |
| NCTC10437_00272 | -2 | 6 | 1.126639 | beta-ketoacyl synthase | |
| NCTC10437_00273 | -1 | 11 | -0.217866 | putative polyketide synthase component | |
| NCTC10437_00274 | -1 | 12 | 0.349773 | transport protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00267 | TCRTETB | 26 | 0.034 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00270 | DHBDHDRGNASE | 83 | 5e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00272 | DHBDHDRGNASE | 42 | 3e-05 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00274 | ACRIFLAVINRP | 58 | 2e-10 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 58 | NCTC10437_00304 | NCTC10437_00310 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00304 | 3 | 29 | -5.244377 | nucleoside-diphosphate-sugar epimerase | |
| NCTC10437_00305 | 4 | 28 | -5.658066 | Emopamil binding protein | |
| NCTC10437_00306 | 4 | 28 | -5.373634 | transcriptional regulator | |
| NCTC10437_00307 | 5 | 28 | -5.645096 | virulence factor Mce family protein | |
| NCTC10437_00308 | 5 | 28 | -6.059566 | virulence factor Mce family protein | |
| NCTC10437_00309 | 5 | 29 | -7.410698 | MCE-family protein MCE4d | |
| NCTC10437_00310 | 5 | 30 | -8.007140 | virulence factor Mce family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00304 | NUCEPIMERASE | 34 | 7e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00306 | HTHTETR | 58 | 8e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00307 | PF03544 | 37 | 1e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00309 | PF03544 | 33 | 0.002 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00310 | RTXTOXIND | 34 | 6e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 59 | NCTC10437_00484 | NCTC10437_00494 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00484 | -1 | 11 | 0.989414 | ATP-dependent chaperone ClpB | |
| NCTC10437_00485 | 0 | 12 | 1.321170 | secreted protein | |
| NCTC10437_00486 | 0 | 11 | 1.457873 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_00487 | -2 | 11 | 1.284748 | Conserved protein of uncharacterised function, | |
| NCTC10437_00488 | -1 | 9 | 1.700917 | tRNA/rRNA methyltransferase SpoU | |
| NCTC10437_00489 | -1 | 9 | 1.714182 | major facilitator transporter | |
| NCTC10437_00490 | 0 | 9 | 1.227440 | transcriptional regulator | |
| NCTC10437_00491 | -1 | 10 | 1.739712 | glycoside hydrolase family protein | |
| NCTC10437_00492 | 0 | 11 | 1.459390 | sodium/proton antiporter, NhaA family | |
| NCTC10437_00493 | 0 | 10 | 0.913016 | integral membrane transport protein | |
| NCTC10437_00494 | 2 | 12 | -0.517867 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00484 | HTHFIS | 43 | 4e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00485 | PF05844 | 30 | 0.012 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00486 | DHBDHDRGNASE | 54 | 1e-10 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00489 | TCRTETB | 158 | 9e-45 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00490 | HTHTETR | 55 | 9e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00493 | TCRTETB | 133 | 3e-36 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00494 | HTHTETR | 63 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 60 | NCTC10437_00827 | NCTC10437_00833 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00827 | 0 | 11 | 1.056736 | protein kinase | |
| NCTC10437_00828 | 1 | 11 | 0.996250 | Uncharacterised protein | |
| NCTC10437_00829 | 1 | 11 | 0.737856 | putative anti-sigma regulatory factor | |
| NCTC10437_00830 | 2 | 11 | 0.678282 | putative membrane transport protein | |
| NCTC10437_00831 | 2 | 15 | 0.132074 | cytochrome P450 | |
| NCTC10437_00832 | 3 | 14 | -0.322842 | cytochrome P450 | |
| NCTC10437_00833 | 0 | 11 | -0.375859 | X-Pro dipeptidyl-peptidase (S15 family) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00827 | YERSSTKINASE | 36 | 5e-04 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00828 | PERTACTIN | 27 | 0.006 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00830 | ACRIFLAVINRP | 59 | 5e-11 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00833 | IGASERPTASE | 35 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 61 | NCTC10437_00860 | NCTC10437_00867 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00860 | 0 | 12 | -0.650177 | protein kinase | |
| NCTC10437_00861 | 0 | 10 | -1.416411 | arabinose efflux permease family protein | |
| NCTC10437_00862 | 0 | 9 | -0.824716 | protein of uncharacterised function (DUF1206) | |
| NCTC10437_00863 | -1 | 8 | -1.395515 | sugar transferase | |
| NCTC10437_00864 | -1 | 9 | -0.948101 | putative arginine and alanine rich protein | |
| NCTC10437_00865 | 0 | 10 | -1.358310 | transporter | |
| NCTC10437_00866 | 2 | 10 | -0.081818 | transmembrane proteinm, MmpS5 | |
| NCTC10437_00867 | 1 | 10 | 0.820919 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00860 | PERTACTIN | 32 | 0.008 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00861 | TCRTETA | 36 | 3e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00865 | ACRIFLAVINRP | 49 | 7e-08 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00867 | HTHTETR | 57 | 7e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 62 | NCTC10437_00907 | NCTC10437_00923 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00907 | 0 | 12 | 1.119947 | iron ABC transporter ATP-binding protein | |
| NCTC10437_00908 | -1 | 13 | 0.664160 | Uncharacterised protein | |
| NCTC10437_00909 | -1 | 12 | 0.708425 | secreted protein | |
| NCTC10437_00910 | 0 | 9 | 0.014331 | TetR family transcriptional regulator | |
| NCTC10437_00911 | -1 | 8 | -0.070760 | TetR family transcriptional regulator | |
| NCTC10437_00912 | 0 | 8 | -0.079164 | NmrA family protein | |
| NCTC10437_00913 | 1 | 9 | -0.621621 | Ketosteroid isomerase-related protein | |
| NCTC10437_00914 | 0 | 11 | -0.224166 | TetR family transcriptional regulator | |
| NCTC10437_00915 | 1 | 11 | 0.085260 | sulfate transporter | |
| NCTC10437_00916 | 3 | 12 | 0.054258 | putative transcriptional regulator | |
| NCTC10437_00917 | 2 | 11 | 0.575365 | L-2-haloacid dehalogenase | |
| NCTC10437_00918 | 2 | 10 | 0.737515 | TetR family transcriptional regulator | |
| NCTC10437_00919 | 2 | 10 | 1.226850 | Putative S-adenosyl-L-methionine-dependent | |
| NCTC10437_00920 | 1 | 9 | 0.517453 | arabinose efflux permease family protein | |
| NCTC10437_00921 | 1 | 8 | 0.332171 | lipoprotein | |
| NCTC10437_00922 | 1 | 8 | 0.571098 | integral membrane sensor signal transduction | |
| NCTC10437_00923 | 0 | 8 | 0.445371 | two component transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00907 | PF05272 | 30 | 0.012 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00910 | HTHTETR | 55 | 2e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00911 | HTHTETR | 53 | 6e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00912 | NUCEPIMERASE | 37 | 7e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00914 | HTHTETR | 58 | 2e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00918 | HTHTETR | 35 | 1e-04 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00920 | TCRTETA | 43 | 3e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00922 | PF06580 | 31 | 0.006 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00923 | HTHFIS | 84 | 6e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 63 | NCTC10437_00965 | NCTC10437_00973 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00965 | -1 | 10 | 0.924043 | transcriptional regulator, TetR family | |
| NCTC10437_00966 | -3 | 8 | 0.769768 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_00967 | 0 | 11 | 2.204725 | acetamidase/formamidase | |
| NCTC10437_00968 | 1 | 10 | 2.508754 | deazaflavin-dependent nitroreductase family | |
| NCTC10437_00969 | 1 | 10 | 2.542035 | Uncharacterised protein | |
| NCTC10437_00970 | 2 | 11 | 2.442475 | esterase | |
| NCTC10437_00971 | 0 | 10 | 1.219797 | mitomycin antibiotics/polyketide fumonisin | |
| NCTC10437_00972 | -1 | 9 | 1.222694 | Uncharacterised protein | |
| NCTC10437_00973 | -1 | 10 | 0.432851 | Bcr/CflA subfamily drug resistance transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00965 | TETREPRESSOR | 85 | 7e-23 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00966 | DHBDHDRGNASE | 105 | 1e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00970 | TONBPROTEIN | 30 | 0.013 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00972 | cloacin | 40 | 2e-05 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00973 | TCRTETA | 69 | 8e-15 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 64 | NCTC10437_00981 | NCTC10437_00987 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_00981 | -1 | 9 | 0.593837 | MMPL domain-containing protein | |
| NCTC10437_00982 | 0 | 11 | -0.075338 | Uncharacterized protein conserved in bacteria | |
| NCTC10437_00983 | 0 | 8 | 0.084029 | Uncharacterised protein | |
| NCTC10437_00984 | 0 | 8 | 0.268950 | sugar ABC transporter substrate-binding protein | |
| NCTC10437_00985 | 0 | 9 | 0.649474 | binding-protein-dependent transport system inner | |
| NCTC10437_00986 | 0 | 10 | 0.761815 | binding-protein-dependent transport system inner | |
| NCTC10437_00987 | 0 | 10 | 0.805155 | ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00981 | ACRIFLAVINRP | 59 | 5e-11 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00982 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00985 | PF06580 | 29 | 0.029 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_00987 | PF05272 | 31 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 65 | NCTC10437_01060 | NCTC10437_01070 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01060 | 0 | 16 | -2.899005 | TetR family transcriptional regulator | |
| NCTC10437_01061 | 1 | 16 | -2.486535 | 30S ribosomal protein S12 | |
| NCTC10437_01062 | 0 | 14 | -2.815448 | 30S ribosomal protein S7 | |
| NCTC10437_01063 | 0 | 13 | -2.706864 | translation elongation factor 2 (EF-2/EF-G) | |
| NCTC10437_01064 | 0 | 11 | -1.491317 | elongation factor Tu | |
| NCTC10437_01065 | 0 | 11 | -0.796428 | Uncharacterised protein | |
| NCTC10437_01066 | 1 | 9 | -1.131493 | cutinase | |
| NCTC10437_01067 | -1 | 8 | -1.283764 | Conserved membrane protein of uncharacterised | |
| NCTC10437_01068 | -1 | 9 | -0.948062 | oxidoreductase, SDR family | |
| NCTC10437_01069 | -1 | 9 | -0.373949 | ornithine aminotransferase | |
| NCTC10437_01070 | -1 | 11 | -0.258971 | amidinotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01060 | TETREPRESSOR | 51 | 2e-10 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01063 | TCRTETOQM | 585 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01064 | TCRTETOQM | 79 | 5e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01065 | TONBPROTEIN | 31 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01068 | DHBDHDRGNASE | 113 | 5e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01070 | ARGDEIMINASE | 31 | 0.004 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| 66 | NCTC10437_01253 | NCTC10437_01266 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01253 | 1 | 8 | 2.193167 | integral membrane sensor signal transduction | |
| NCTC10437_01254 | 1 | 10 | 0.513529 | roadblock/LC7 family protein | |
| NCTC10437_01255 | -1 | 6 | 0.708899 | Protein of uncharacterised function (DUF742) | |
| NCTC10437_01256 | -1 | 7 | 1.011482 | putative GTPase | |
| NCTC10437_01257 | -1 | 7 | 0.805705 | pentapeptide repeat-containing protein | |
| NCTC10437_01258 | -1 | 7 | 1.015075 | 6,7-dihydropteridine reductase | |
| NCTC10437_01259 | 0 | 9 | 1.173516 | transcriptional regulator, TetR family | |
| NCTC10437_01260 | -1 | 8 | 1.363262 | ABC-type multidrug transport system, ATPase | |
| NCTC10437_01261 | -1 | 8 | 1.710257 | TetR family transcriptional regulator | |
| NCTC10437_01262 | -1 | 8 | 0.909145 | NADH:flavin oxidoreductase | |
| NCTC10437_01263 | -1 | 8 | 1.273840 | 5,10-methylene-tetrahydrofolate | |
| NCTC10437_01264 | -2 | 10 | 0.940767 | Protein of uncharacterised function (DUF3017) | |
| NCTC10437_01265 | -2 | 9 | 0.880737 | methylase involved in ubiquinone/menaquinone | |
| NCTC10437_01266 | -1 | 8 | 0.529518 | homoserine O-acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01253 | PF03544 | 30 | 0.039 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01258 | PERTACTIN | 30 | 0.028 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01259 | HTHTETR | 44 | 6e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01260 | TONBPROTEIN | 33 | 0.003 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01261 | HTHTETR | 60 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01266 | RTXTOXINA | 29 | 0.046 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 67 | NCTC10437_01540 | NCTC10437_01546 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01540 | 5 | 30 | -2.178780 | virulence factor Mce family protein | |
| NCTC10437_01541 | 4 | 26 | -2.143867 | virulence factor Mce family protein | |
| NCTC10437_01542 | 2 | 22 | -2.061495 | virulence factor Mce family protein | |
| NCTC10437_01543 | 3 | 22 | -1.952586 | ABC-type transport system involved in resistance | |
| NCTC10437_01544 | 2 | 24 | -2.914609 | ABC-type transport system involved in resistance | |
| NCTC10437_01545 | 2 | 25 | -3.427705 | organic solvent resistance ABC transporter | |
| NCTC10437_01546 | 2 | 27 | -3.823513 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01540 | IGASERPTASE | 29 | 0.042 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01541 | PERTACTIN | 35 | 9e-04 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01543 | PF05616 | 35 | 4e-04 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01546 | HTHTETR | 68 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 68 | NCTC10437_01592 | NCTC10437_01602 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01592 | 0 | 11 | -2.346572 | transcriptional regulator | |
| NCTC10437_01593 | -1 | 12 | -3.531405 | DSBA oxidoreductase | |
| NCTC10437_01594 | -1 | 11 | -2.869908 | Transport protein | |
| NCTC10437_01595 | -1 | 13 | -1.956448 | mycobacterium membrane protein | |
| NCTC10437_01596 | 0 | 13 | -0.989809 | TetR family transcriptional regulator | |
| NCTC10437_01597 | 1 | 15 | -1.348568 | CsbD family protein | |
| NCTC10437_01598 | 0 | 13 | -0.137476 | ABC sugar transporter, periplasmic ligand | |
| NCTC10437_01599 | 0 | 13 | 0.785479 | Phytanoyl-CoA dioxygenase (PhyH) | |
| NCTC10437_01600 | 0 | 12 | 2.047079 | Uncharacterised protein | |
| NCTC10437_01601 | 0 | 10 | 2.577635 | Uncharacterised protein | |
| NCTC10437_01602 | -1 | 10 | 2.912519 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01592 | HTHTETR | 49 | 3e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01594 | ACRIFLAVINRP | 50 | 4e-08 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01596 | HTHTETR | 55 | 2e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01597 | IGASERPTASE | 25 | 0.030 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01601 | BACYPHPHTASE | 29 | 0.020 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01602 | HTHTETR | 63 | 8e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 69 | NCTC10437_01663 | NCTC10437_01670 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01663 | -1 | 15 | -1.792267 | putative integral membrane alanine and leucine | |
| NCTC10437_01664 | 0 | 12 | -1.704684 | TetR family transcriptional regulator | |
| NCTC10437_01665 | 0 | 9 | -1.782096 | diguanylate cyclase | |
| NCTC10437_01666 | -1 | 7 | -0.432186 | isochorismatase hydrolase | |
| NCTC10437_01667 | -1 | 7 | 0.175637 | Uncharacterised protein | |
| NCTC10437_01668 | 0 | 7 | 0.520239 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_01669 | -1 | 6 | 1.195592 | cyclohexanone monooxygenase | |
| NCTC10437_01670 | -2 | 9 | 1.055230 | short-chain dehydrogenase/reductase SDR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01663 | RTXTOXINA | 30 | 0.013 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01664 | HTHTETR | 45 | 5e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01666 | ISCHRISMTASE | 54 | 4e-11 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01668 | DHBDHDRGNASE | 135 | 1e-40 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01670 | DHBDHDRGNASE | 135 | 5e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 70 | NCTC10437_01728 | NCTC10437_01736 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01728 | 5 | 13 | -0.146630 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_01729 | 4 | 17 | -0.828697 | Domain of uncharacterised function (DUF309) | |
| NCTC10437_01730 | 4 | 18 | -1.422498 | Phospholipase/Carboxylesterase | |
| NCTC10437_01731 | 4 | 15 | -1.219313 | transglycosylase associated protein | |
| NCTC10437_01732 | 4 | 12 | -0.566167 | CsbD-like protein | |
| NCTC10437_01733 | 0 | 12 | -0.206764 | Uncharacterised protein | |
| NCTC10437_01734 | -1 | 12 | 0.247987 | Uncharacterised protein | |
| NCTC10437_01735 | -2 | 11 | 0.916369 | Protein of uncharacterised function (DUF998) | |
| NCTC10437_01736 | -1 | 11 | 1.070640 | Cutinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01728 | DHBDHDRGNASE | 120 | 5e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01731 | ACRIFLAVINRP | 25 | 0.049 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01732 | IGASERPTASE | 30 | 0.006 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01733 | IGASERPTASE | 45 | 1e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01736 | PF06057 | 30 | 0.008 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| 71 | NCTC10437_01901 | NCTC10437_01914 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01901 | -1 | 9 | 0.032587 | glyoxalase/bleomycin resistance | |
| NCTC10437_01902 | -2 | 9 | -0.230797 | Uncharacterised protein | |
| NCTC10437_01903 | -1 | 9 | -0.480390 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_01904 | -1 | 10 | -0.895770 | extracellular solute-binding protein | |
| NCTC10437_01905 | -1 | 11 | -1.660956 | TetR family transcriptional regulator | |
| NCTC10437_01906 | -1 | 11 | -1.835959 | agmatinase | |
| NCTC10437_01907 | 0 | 10 | -0.803085 | geranylgeranyl reductase | |
| NCTC10437_01908 | 0 | 9 | -0.652856 | TetR family transcriptional regulator | |
| NCTC10437_01909 | 0 | 9 | -0.539387 | putative monooxygenase | |
| NCTC10437_01910 | -1 | 7 | 0.105531 | ribonucleotide-diphosphate reductase subunit | |
| NCTC10437_01911 | -1 | 6 | 1.096723 | Uncharacterised protein | |
| NCTC10437_01912 | -1 | 7 | 1.374207 | multi-sensor signal transduction histidine | |
| NCTC10437_01913 | -1 | 9 | -0.061343 | response regulator receiver protein | |
| NCTC10437_01914 | -1 | 9 | 0.005081 | two component LuxR family transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01901 | MPTASEINHBTR | 26 | 0.039 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01903 | DHBDHDRGNASE | 94 | 6e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01905 | HTHTETR | 61 | 7e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01908 | HTHTETR | 50 | 2e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01912 | PF06580 | 34 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01913 | HTHFIS | 54 | 1e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01914 | HTHFIS | 72 | 8e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 72 | NCTC10437_01921 | NCTC10437_01928 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_01921 | 0 | 10 | -0.232314 | TetR family transcriptional regulator | |
| NCTC10437_01922 | -1 | 10 | -0.243149 | oligopeptide/dipeptide ABC transporter ATPase | |
| NCTC10437_01923 | -2 | 8 | -0.213922 | binding-protein-dependent transport systems | |
| NCTC10437_01924 | -2 | 9 | 0.082245 | binding-protein-dependent transport systems | |
| NCTC10437_01925 | -1 | 9 | 0.828199 | nicotinamidase-like amidase | |
| NCTC10437_01926 | 0 | 10 | 1.134179 | extracellular solute-binding protein | |
| NCTC10437_01927 | 1 | 11 | 1.776397 | beta-lactamase domain-containing protein | |
| NCTC10437_01928 | 1 | 10 | 2.179391 | allantoinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01921 | HTHTETR | 67 | 1e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01922 | PYOCINKILLER | 30 | 0.041 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01925 | ISCHRISMTASE | 49 | 2e-09 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_01928 | UREASE | 32 | 0.004 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 73 | NCTC10437_02413 | NCTC10437_02420 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02413 | -1 | 8 | -0.437021 | thioester reductase-like protein | |
| NCTC10437_02414 | -2 | 10 | -0.155913 | cytochrome P450 133B1 | |
| NCTC10437_02415 | -2 | 11 | 0.148890 | gamma-aminobutyraldehyde dehydrogenase | |
| NCTC10437_02416 | -2 | 12 | 0.462819 | 4-aminobutyrate aminotransferase | |
| NCTC10437_02417 | -2 | 10 | 0.054624 | protein translocase subunit yajC | |
| NCTC10437_02418 | -1 | 10 | 0.298605 | protein-export membrane protein SecD | |
| NCTC10437_02419 | -1 | 10 | 0.240111 | preprotein translocase subunit SecF | |
| NCTC10437_02420 | 0 | 10 | 0.254879 | extracellular solute-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02413 | NUCEPIMERASE | 39 | 8e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02418 | SECFTRNLCASE | 61 | 3e-12 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02419 | SECFTRNLCASE | 243 | 1e-79 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02420 | INTIMIN | 30 | 0.032 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 74 | NCTC10437_02473 | NCTC10437_02478 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02473 | 2 | 14 | 2.431083 | dehydrogenase | |
| NCTC10437_02474 | 3 | 16 | 2.323418 | Uncharacterised protein | |
| NCTC10437_02475 | 3 | 15 | 1.951943 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_02476 | 3 | 17 | 1.991070 | Uncharacterised protein | |
| NCTC10437_02477 | -1 | 15 | 0.366867 | Protein of uncharacterised function (DUF3097) | |
| NCTC10437_02478 | -2 | 9 | 0.010993 | recombination factor protein RarA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02473 | DHBDHDRGNASE | 87 | 1e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02475 | DHBDHDRGNASE | 57 | 1e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02476 | cloacin | 40 | 2e-05 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02478 | HTHFIS | 32 | 0.006 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 75 | NCTC10437_02599 | NCTC10437_02605 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02599 | 0 | 9 | 0.827147 | NLP/P60 protein | |
| NCTC10437_02600 | 1 | 9 | 0.254179 | NLP/P60 protein | |
| NCTC10437_02601 | 0 | 9 | -0.008107 | ATPase | |
| NCTC10437_02602 | 1 | 11 | 0.638024 | transcriptional regulator moxR1 | |
| NCTC10437_02603 | 0 | 10 | 0.078435 | Mg-chelatase subunit ChlD | |
| NCTC10437_02604 | -1 | 10 | 0.223244 | 3-oxoacyl-(acyl-carrier-protein) reductase | |
| NCTC10437_02605 | -1 | 10 | 0.237860 | enoyl-(acyl-carrier-protein) reductase (NADH) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02599 | PYOCINKILLER | 36 | 4e-04 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02601 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02604 | DHBDHDRGNASE | 116 | 1e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02605 | DHBDHDRGNASE | 51 | 9e-10 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 76 | NCTC10437_02673 | NCTC10437_02689 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02673 | -1 | 8 | 0.144718 | Uncharacterised protein | |
| NCTC10437_02674 | -1 | 9 | -0.268638 | ABC transporter, transmembrane region, type 1 | |
| NCTC10437_02675 | -1 | 10 | -1.668527 | ABC transporter transmembrane protein | |
| NCTC10437_02676 | 1 | 10 | -2.906703 | cytochrome d ubiquinol oxidase subunit II | |
| NCTC10437_02677 | 1 | 9 | -2.405661 | cytochrome bd ubiquinol oxidase subunit I | |
| NCTC10437_02678 | 2 | 9 | -1.535704 | integral membrane protein | |
| NCTC10437_02679 | 0 | 9 | -0.025968 | extracellular solute-binding protein | |
| NCTC10437_02680 | -1 | 9 | 0.171288 | polar amino acid ABC transporter inner membrane | |
| NCTC10437_02681 | -2 | 8 | 0.354453 | ABC transporter-like protein | |
| NCTC10437_02682 | -1 | 9 | 0.902460 | putative signal transduction histidine kinase | |
| NCTC10437_02683 | 0 | 9 | 0.629712 | two component LuxR family transcriptional | |
| NCTC10437_02684 | -2 | 7 | 0.180595 | putative membrane protein (DUF2339) | |
| NCTC10437_02685 | -2 | 9 | -1.503746 | DNA-binding ferritin-like protein (oxidative | |
| NCTC10437_02686 | -2 | 10 | -2.107397 | family 3 adenylate cyclase | |
| NCTC10437_02687 | -1 | 12 | -2.367074 | putative amidohydrolase | |
| NCTC10437_02689 | 1 | 11 | -2.977994 | *response regulator receiver/ANTAR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02673 | PRTACTNFAMLY | 28 | 0.017 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02674 | PF05272 | 32 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02675 | PF05272 | 30 | 0.040 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02679 | MICOLLPTASE | 29 | 0.028 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02681 | PF05272 | 31 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02683 | HTHFIS | 69 | 4e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02684 | TONBPROTEIN | 40 | 1e-05 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02685 | HELNAPAPROT | 107 | 1e-32 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02689 | HTHFIS | 78 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 77 | NCTC10437_02787 | NCTC10437_02794 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02787 | -1 | 10 | 0.345869 | short-chain dehydrogenase | |
| NCTC10437_02788 | -2 | 11 | -0.140881 | threonine dehydratase | |
| NCTC10437_02789 | 1 | 13 | -1.018404 | permease for cytosine/purines uracil thiamine | |
| NCTC10437_02790 | 0 | 17 | -0.771465 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_02791 | -1 | 17 | -0.476147 | Predicted membrane protein | |
| NCTC10437_02792 | -1 | 11 | -0.388832 | XRE family transcriptional regulator | |
| NCTC10437_02793 | -2 | 9 | -0.205539 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_02794 | -3 | 9 | -0.026234 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02787 | DHBDHDRGNASE | 105 | 9e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02790 | DHBDHDRGNASE | 129 | 2e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02793 | DHBDHDRGNASE | 102 | 4e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02794 | RTXTOXIND | 29 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 78 | NCTC10437_02901 | NCTC10437_02915 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_02901 | -1 | 11 | -1.489754 | efpA_1 | |
| NCTC10437_02902 | -1 | 10 | -1.344427 | mycobacterium membrane protein | |
| NCTC10437_02903 | -1 | 11 | -1.282671 | Transport protein | |
| NCTC10437_02904 | -1 | 10 | -0.588760 | membrane protein mmpL4 | |
| NCTC10437_02905 | -1 | 10 | 0.164044 | Phenolphthiocerol synthesis polyketide synthase | |
| NCTC10437_02906 | -1 | 10 | -0.660468 | polyketide synthase, Pks8 | |
| NCTC10437_02907 | 0 | 9 | -0.823940 | Polyketide biosynthesis protein BaeE | |
| NCTC10437_02908 | 1 | 8 | -0.807875 | Uncharacterised protein | |
| NCTC10437_02909 | 1 | 8 | -0.656094 | Uncharacterised protein | |
| NCTC10437_02910 | 2 | 8 | -0.243858 | glucose-1-phosphate thymidylyltransferase | |
| NCTC10437_02911 | 1 | 9 | 0.513343 | dTDP-glucose 4,6-dehydratase | |
| NCTC10437_02912 | 1 | 9 | 1.328469 | dTDP-4-dehydrorhamnose reductase | |
| NCTC10437_02913 | 0 | 11 | 1.578519 | ErfK/YbiS/YcfS/YnhG family protein | |
| NCTC10437_02914 | -2 | 10 | 0.580791 | Uncharacterised protein | |
| NCTC10437_02915 | 0 | 10 | 0.468205 | FHA domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02901 | TCRTETB | 113 | 4e-29 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02903 | ACRIFLAVINRP | 42 | 1e-05 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02904 | ACRIFLAVINRP | 50 | 4e-08 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02905 | PF03544 | 41 | 3e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02906 | IGASERPTASE | 42 | 2e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02911 | NUCEPIMERASE | 141 | 2e-41 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02912 | NUCEPIMERASE | 37 | 1e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02913 | RTXTOXINA | 28 | 0.045 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_02915 | PF03544 | 36 | 2e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 79 | NCTC10437_03198 | NCTC10437_03203 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03198 | -2 | 9 | 0.319887 | TetR family transcriptional regulator | |
| NCTC10437_03200 | -1 | 9 | -0.616068 | *major facilitator superfamily transporter | |
| NCTC10437_03201 | 1 | 10 | -1.091810 | excinuclease ABC subunit B uvrB | |
| NCTC10437_03202 | -1 | 11 | -0.956275 | Protein of uncharacterised function (DUF402) | |
| NCTC10437_03203 | -1 | 10 | -0.933682 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03198 | HTHTETR | 47 | 9e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03200 | TCRTETB | 62 | 2e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03201 | FLGMOTORFLIM | 30 | 0.034 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03203 | FLGPRINGFLGI | 28 | 0.020 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| 80 | NCTC10437_03221 | NCTC10437_03232 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03221 | -1 | 8 | 0.320733 | pyruvate, water dikinase | |
| NCTC10437_03222 | -1 | 9 | 0.089276 | regulatory protein ArsR | |
| NCTC10437_03223 | 0 | 9 | 0.467918 | glyoxalase/bleomycin resistance | |
| NCTC10437_03224 | -1 | 9 | 0.460385 | aminoglycoside phosphotransferase | |
| NCTC10437_03225 | 0 | 10 | 0.066168 | NAD-dependent epimerase/dehydratase | |
| NCTC10437_03226 | -1 | 11 | -0.394720 | TetR family transcriptional regulator | |
| NCTC10437_03227 | 0 | 10 | -0.423998 | anaerobic dehydrogenase, typically | |
| NCTC10437_03228 | 0 | 13 | -0.909326 | peptidoglycan binding domain-containing protein | |
| NCTC10437_03229 | -2 | 13 | -0.662475 | Polyketide cyclase / dehydrase and lipid | |
| NCTC10437_03230 | -2 | 13 | 0.155293 | NADH:flavin oxidoreductase/nadh oxidase | |
| NCTC10437_03231 | -2 | 12 | 0.837845 | histidinol-phosphatase | |
| NCTC10437_03232 | -2 | 14 | 1.196495 | protein of uncharacterised function DUF222 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03221 | PHPHTRNFRASE | 61 | 8e-12 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03225 | NUCEPIMERASE | 55 | 1e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03226 | HTHTETR | 57 | 3e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03227 | RTXTOXINA | 31 | 0.029 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03232 | PF05616 | 30 | 0.024 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| 81 | NCTC10437_03262 | NCTC10437_03271 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03262 | 3 | 13 | 0.534688 | putative permease, DMT superfamily | |
| NCTC10437_03263 | 1 | 17 | -0.616304 | Uncharacterised protein | |
| NCTC10437_03264 | -1 | 15 | -2.286478 | TetR family transcriptional regulator | |
| NCTC10437_03265 | -1 | 16 | -2.570447 | short chain dehydrogenase | |
| NCTC10437_03266 | -1 | 17 | -2.533415 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_03267 | 0 | 16 | -2.387064 | 4-carboxymuconolactone decarboxylase | |
| NCTC10437_03268 | 0 | 15 | -1.529942 | betaine aldehyde dehydrogenase | |
| NCTC10437_03269 | -2 | 13 | -0.647433 | cytochrome P450 | |
| NCTC10437_03270 | -2 | 12 | 0.673639 | transcriptional regulator | |
| NCTC10437_03271 | -2 | 11 | 0.779634 | oxidoreductase, SDR family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03262 | TCRTETA | 29 | 0.023 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03263 | cloacin | 28 | 0.024 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03264 | HTHTETR | 46 | 2e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03265 | DHBDHDRGNASE | 85 | 7e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03266 | DHBDHDRGNASE | 94 | 3e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03270 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03271 | DHBDHDRGNASE | 108 | 3e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 82 | NCTC10437_03394 | NCTC10437_03402 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03394 | 2 | 8 | -1.409324 | signal transduction histidine kinase regulating | |
| NCTC10437_03395 | 1 | 8 | -1.549615 | response regulator receiver/uncharacterised | |
| NCTC10437_03396 | 1 | 8 | -1.583960 | chitinase, cellulase | |
| NCTC10437_03397 | 0 | 10 | 0.057277 | beta-lactamase | |
| NCTC10437_03398 | 2 | 12 | 0.503090 | glutamine amidotransferase | |
| NCTC10437_03399 | 2 | 14 | 0.751203 | TIGR01777 family protein | |
| NCTC10437_03400 | 3 | 15 | 0.182687 | phosphoribosyltransferase | |
| NCTC10437_03401 | 1 | 14 | 0.556072 | transmembrane protein | |
| NCTC10437_03402 | 0 | 11 | 1.115632 | DivIVA domain protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03394 | PF06580 | 40 | 2e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03395 | HTHFIS | 79 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03396 | FLAGELLIN | 35 | 0.006 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03399 | NUCEPIMERASE | 43 | 2e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03402 | RTXTOXIND | 34 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 83 | NCTC10437_03837 | NCTC10437_03846 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03837 | -1 | 10 | -0.018720 | carbamoyl-phosphate synthase ATP-binding subunit | |
| NCTC10437_03838 | 0 | 9 | -0.418452 | acetyl-CoA carboxylase, carboxyltransferase | |
| NCTC10437_03839 | -1 | 12 | 0.147830 | transcriptional regulator | |
| NCTC10437_03840 | 1 | 10 | 0.435923 | Uncharacterised protein | |
| NCTC10437_03841 | -1 | 10 | 0.697179 | Uncharacterised protein | |
| NCTC10437_03842 | -1 | 9 | 0.628947 | peptidase S9 prolyl oligopeptidase | |
| NCTC10437_03843 | -1 | 9 | 0.072437 | mycobacterium membrane protein | |
| NCTC10437_03844 | 0 | 9 | -0.370924 | major facilitator transporter | |
| NCTC10437_03845 | 0 | 9 | -0.946368 | short-chain dehydrogenase of uncharacterised | |
| NCTC10437_03846 | 0 | 11 | -1.353845 | ATPase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03837 | RTXTOXIND | 37 | 3e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03839 | HTHTETR | 62 | 4e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03840 | PilS_PF08805 | 24 | 0.027 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03843 | PF04335 | 29 | 0.012 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03845 | DHBDHDRGNASE | 77 | 1e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03846 | TONBPROTEIN | 32 | 0.005 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 84 | NCTC10437_03877 | NCTC10437_03884 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_03877 | -1 | 10 | -1.312082 | TetR family transcriptional regulator | |
| NCTC10437_03878 | 0 | 10 | -1.438061 | cytochrome P450 | |
| NCTC10437_03879 | 0 | 12 | -1.072633 | putative secreted protein | |
| NCTC10437_03880 | 0 | 12 | -1.358291 | putative secreted protein | |
| NCTC10437_03881 | 1 | 12 | -1.971722 | putative secreted protein | |
| NCTC10437_03882 | 2 | 12 | -1.878827 | virulence factor Mce family protein | |
| NCTC10437_03883 | 1 | 11 | -2.254846 | virulence factor Mce family protein | |
| NCTC10437_03884 | 0 | 10 | -2.325638 | virulence factor Mce family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03877 | HTHTETR | 56 | 6e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03879 | 56KDTSANTIGN | 28 | 0.019 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03882 | PERTACTIN | 29 | 0.044 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03883 | PF03544 | 34 | 8e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_03884 | PF03544 | 35 | 5e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 85 | NCTC10437_04149 | NCTC10437_04156 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04149 | -1 | 7 | 0.186002 | sulfate adenylyltransferase, large subunit | |
| NCTC10437_04150 | 0 | 8 | 1.167127 | sulfate adenylyltransferase, small subunit | |
| NCTC10437_04151 | 0 | 8 | 1.483649 | carbonic anhydrase | |
| NCTC10437_04152 | 1 | 9 | 1.990689 | glycosyl transferase family protein | |
| NCTC10437_04153 | 0 | 10 | 1.401263 | glycosyl transferase family protein | |
| NCTC10437_04154 | 1 | 11 | 1.224011 | glycosyl transferase family protein | |
| NCTC10437_04155 | 0 | 11 | 1.097451 | signal transduction histidine kinase | |
| NCTC10437_04156 | -1 | 9 | 0.101319 | two component transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04149 | TCRTETOQM | 61 | 7e-12 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04152 | cloacin | 33 | 0.004 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04155 | PF06580 | 35 | 7e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04156 | HTHFIS | 101 | 7e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 86 | NCTC10437_04203 | NCTC10437_04208 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04203 | 0 | 13 | -0.014814 | EmrB/QacA family drug resistance transporter | |
| NCTC10437_04204 | 0 | 13 | -0.008430 | Bcr/CflA subfamily drug resistance transporter | |
| NCTC10437_04205 | 1 | 13 | -0.420982 | membrane protein | |
| NCTC10437_04206 | 0 | 13 | -0.892063 | alpha-ketoglutarate decarboxylase | |
| NCTC10437_04207 | 0 | 11 | -0.183408 | Protein of uncharacterised function (DUF732) | |
| NCTC10437_04208 | 0 | 11 | -0.343559 | short-chain alcohol dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04203 | TCRTETB | 157 | 5e-44 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04204 | TCRTETA | 67 | 2e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04206 | PF03544 | 35 | 0.001 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04208 | DHBDHDRGNASE | 79 | 3e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 87 | NCTC10437_04215 | NCTC10437_04228 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04215 | 0 | 10 | 2.448355 | Uncharacterised protein | |
| NCTC10437_04216 | -1 | 9 | 2.296541 | citryl-CoA lyase | |
| NCTC10437_04217 | 0 | 8 | 1.901932 | MgtE integral membrane protein | |
| NCTC10437_04218 | 0 | 9 | 1.955051 | integral membrane protein | |
| NCTC10437_04219 | 0 | 10 | 1.790594 | membrane-bound lytic murein transglycosylase B | |
| NCTC10437_04220 | 0 | 12 | 1.002768 | ATPase involved in chromosome partitioning | |
| NCTC10437_04221 | -1 | 10 | 0.238832 | twin arginine-targeting protein translocase | |
| NCTC10437_04222 | 0 | 11 | -0.223079 | peptidase S1 and S6, chymotrypsin/Hap | |
| NCTC10437_04223 | -3 | 11 | 0.321457 | RNA polymerase sigma-70 factor | |
| NCTC10437_04224 | -2 | 10 | 0.075278 | RNA polymerase sigma factor SigE | |
| NCTC10437_04225 | -2 | 11 | 0.452448 | O-methyltransferase family protein | |
| NCTC10437_04226 | -1 | 11 | -0.003658 | transcriptional regulator | |
| NCTC10437_04227 | 0 | 10 | -0.088956 | ABC transporter--like protein | |
| NCTC10437_04228 | 0 | 10 | 0.020269 | ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04215 | TONBPROTEIN | 28 | 0.024 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04219 | PF05616 | 35 | 6e-04 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04221 | TATBPROTEIN | 82 | 9e-23 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04222 | V8PROTEASE | 74 | 1e-16 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04226 | HTHTETR | 55 | 2e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04228 | ACRIFLAVINRP | 29 | 0.041 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 88 | NCTC10437_04303 | NCTC10437_04318 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04303 | -1 | 10 | -0.750002 | TetR family transcriptional regulator | |
| NCTC10437_04304 | -1 | 10 | -0.555605 | MMPL domain-containing protein | |
| NCTC10437_04305 | 1 | 11 | -0.706587 | DoxX family protein | |
| NCTC10437_04306 | -1 | 11 | -0.245390 | Uncharacterised protein | |
| NCTC10437_04307 | -1 | 10 | 0.005840 | 2-nitropropane dioxygenase-like enzyme | |
| NCTC10437_04308 | -2 | 9 | 0.217434 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_04309 | -2 | 10 | 0.328246 | L-carnitine dehydratase/bile acid-inducible | |
| NCTC10437_04310 | -2 | 8 | 0.357656 | enoyl-CoA hydratase | |
| NCTC10437_04311 | -1 | 9 | 0.256603 | H+ antiporter protein | |
| NCTC10437_04312 | -2 | 9 | 0.420519 | abortive infection protein | |
| NCTC10437_04313 | -2 | 9 | -0.004708 | nucleoside-diphosphate sugar epimerase | |
| NCTC10437_04314 | -1 | 12 | 0.266406 | carbonic anhydrase | |
| NCTC10437_04315 | -1 | 12 | 0.137887 | short-chain alcohol dehydrogenase | |
| NCTC10437_04316 | -1 | 10 | 0.349309 | TetR family transcriptional regulator | |
| NCTC10437_04317 | 0 | 11 | 0.513625 | beta-Ig-H3/fasciclin | |
| NCTC10437_04318 | -1 | 11 | -0.644332 | acyl-CoA dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04303 | HTHTETR | 63 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04304 | ACRIFLAVINRP | 49 | 6e-08 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04307 | AUTOINDCRSYN | 31 | 0.005 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04308 | DHBDHDRGNASE | 72 | 3e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04312 | PHPHTRNFRASE | 29 | 0.025 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04313 | NUCEPIMERASE | 53 | 6e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04315 | DHBDHDRGNASE | 63 | 1e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04316 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04318 | SECFTRNLCASE | 29 | 0.024 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| 89 | NCTC10437_04334 | NCTC10437_04341 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04334 | 0 | 10 | -1.308093 | virulence factor Mce family protein | |
| NCTC10437_04335 | -1 | 11 | -1.267954 | virulence factor Mce family protein | |
| NCTC10437_04336 | 0 | 11 | -0.892687 | virulence factor Mce family protein | |
| NCTC10437_04337 | -2 | 8 | -0.622136 | ABC-type transport system involved in resistance | |
| NCTC10437_04338 | -1 | 9 | -0.058887 | organic solvent resistance ABC transporter | |
| NCTC10437_04339 | -1 | 9 | 0.304710 | 3-demethylubiquinone-9 3-methyltransferase | |
| NCTC10437_04340 | -1 | 10 | 0.506928 | TetR family transcriptional regulator | |
| NCTC10437_04341 | 0 | 11 | 0.049085 | alpha/beta hydrolase fold protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04334 | TONBPROTEIN | 31 | 0.009 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04336 | PF05616 | 37 | 2e-04 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04337 | PERTACTIN | 28 | 0.047 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04340 | HTHTETR | 73 | 3e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04341 | PF06057 | 31 | 0.004 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| 90 | NCTC10437_04459 | NCTC10437_04466 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04459 | -1 | 13 | -1.023020 | 3-alpha-hydroxysteroid dehydrogenase | |
| NCTC10437_04460 | 0 | 13 | -1.645562 | esterase/lipase | |
| NCTC10437_04461 | 0 | 16 | -2.685269 | Uncharacterised protein | |
| NCTC10437_04462 | 1 | 16 | -3.094690 | universal stress protein UspA-like protein | |
| NCTC10437_04463 | 1 | 17 | -3.848021 | amino acid permease-associated protein | |
| NCTC10437_04464 | 2 | 23 | -4.030028 | protein of uncharacterised function DUF222 | |
| NCTC10437_04465 | 6 | 18 | -3.359691 | Protein of uncharacterised function (DUF3303) | |
| NCTC10437_04466 | 1 | 13 | -3.274350 | deazaflavin-dependent nitroreductase family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04459 | DHBDHDRGNASE | 55 | 4e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04460 | TONBPROTEIN | 37 | 2e-04 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04465 | STREPKINASE | 25 | 0.042 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04466 | FbpA_PF05833 | 27 | 0.031 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| 91 | NCTC10437_04510 | NCTC10437_04516 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04510 | -1 | 13 | 0.215234 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_04511 | 1 | 10 | -0.693894 | 50S ribosomal protein L25/general stress protein | |
| NCTC10437_04512 | 0 | 8 | -0.708972 | peptidyl-tRNA hydrolase | |
| NCTC10437_04513 | 0 | 11 | -0.710709 | Uncharacterised protein | |
| NCTC10437_04514 | 1 | 10 | -0.111940 | Uncharacterised protein | |
| NCTC10437_04515 | 0 | 11 | -0.156808 | putative Fe-S protein | |
| NCTC10437_04516 | 1 | 9 | -0.925059 | ABC-2 type transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04510 | DHBDHDRGNASE | 54 | 1e-10 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04512 | DPTHRIATOXIN | 29 | 0.016 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04513 | SURFACELAYER | 27 | 0.010 | Lactobacillus surface layer protein signature. | |
>SURFACELAYER#Lactobacillus surface layer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04516 | ABC2TRNSPORT | 37 | 6e-05 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 92 | NCTC10437_04555 | NCTC10437_04566 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04555 | 1 | 13 | -1.054803 | large-conductance mechanosensitive channel | |
| NCTC10437_04556 | 0 | 13 | -0.764854 | MspA protein | |
| NCTC10437_04557 | -1 | 13 | -0.357683 | MspA protein | |
| NCTC10437_04558 | -1 | 9 | 0.150265 | molybdenum cofactor synthesis domain protein | |
| NCTC10437_04559 | -3 | 8 | 0.150760 | trypsin-like serine protease with C-terminal PDZ | |
| NCTC10437_04560 | -2 | 10 | -0.811565 | integral membrane sensor signal transduction | |
| NCTC10437_04561 | -3 | 11 | 0.245298 | two component response transcriptional | |
| NCTC10437_04562 | -2 | 12 | 0.184079 | 50S ribosomal protein L32 | |
| NCTC10437_04563 | -2 | 11 | 0.300461 | Protein of uncharacterised function (DUF1446) | |
| NCTC10437_04564 | -1 | 10 | 0.320388 | acyl-CoA dehydrogenase | |
| NCTC10437_04565 | 0 | 8 | 0.368583 | propionyl-CoA carboxylase | |
| NCTC10437_04566 | 0 | 7 | 1.131024 | pyruvate carboxylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04555 | MECHCHANNEL | 110 | 3e-34 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04556 | OMADHESIN | 29 | 0.010 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04559 | V8PROTEASE | 62 | 8e-13 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04560 | FLAGELLIN | 29 | 0.037 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04561 | HTHFIS | 105 | 2e-28 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04566 | RTXTOXIND | 31 | 0.023 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 93 | NCTC10437_04739 | NCTC10437_04745 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04739 | -1 | 12 | 1.582093 | response regulator with CheY-like receiver | |
| NCTC10437_04740 | 0 | 13 | 1.248008 | integral membrane sensor signal transduction | |
| NCTC10437_04741 | 1 | 17 | 0.366616 | FKBP-type peptidyl-prolyl cis-trans isomerase | |
| NCTC10437_04742 | 0 | 17 | 0.894386 | Protein of uncharacterised function (DUF2630) | |
| NCTC10437_04743 | 0 | 14 | 1.186638 | Uncharacterised protein | |
| NCTC10437_04744 | -1 | 14 | 1.247462 | Uncharacterised protein | |
| NCTC10437_04745 | 0 | 13 | 0.282071 | MspA protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04739 | HTHFIS | 103 | 1e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04741 | INFPOTNTIATR | 49 | 3e-10 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04744 | PF05616 | 31 | 0.003 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04745 | PF05272 | 29 | 0.017 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 94 | NCTC10437_04829 | NCTC10437_04845 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04829 | 0 | 11 | 1.241891 | *transcriptional regulator | |
| NCTC10437_04830 | -1 | 10 | 1.962452 | beta-lactamase domain-containing protein | |
| NCTC10437_04831 | 0 | 10 | 2.250620 | TetR family transcriptional regulator | |
| NCTC10437_04832 | -1 | 10 | 1.811595 | chorismate mutase | |
| NCTC10437_04837 | 0 | 10 | 1.284554 | ****phosphate/phosphite/phosphonate ABC | |
| NCTC10437_04838 | -1 | 11 | 1.297444 | Conserved exported protein of uncharacterised | |
| NCTC10437_04839 | -2 | 10 | 0.641911 | protein kinase | |
| NCTC10437_04840 | -2 | 10 | -0.061930 | putative secreted protein | |
| NCTC10437_04841 | -2 | 10 | -0.644568 | Uncharacterized protein conserved in bacteria | |
| NCTC10437_04842 | -1 | 9 | -1.224669 | transcriptional regulator | |
| NCTC10437_04844 | -1 | 9 | -1.346780 | nifR3 family TIM-barrel protein | |
| NCTC10437_04845 | 0 | 10 | -1.641887 | cell envelope-related transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04829 | HTHTETR | 57 | 2e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04831 | HTHTETR | 47 | 5e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04838 | PF03544 | 30 | 0.008 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04839 | YERSSTKINASE | 33 | 0.001 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04842 | HTHTETR | 39 | 5e-06 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04845 | PF05616 | 33 | 0.003 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| 95 | NCTC10437_04926 | NCTC10437_04931 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04926 | 0 | 12 | 0.000694 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_04927 | 1 | 12 | -0.418816 | AMP-dependent synthetase and ligase | |
| NCTC10437_04928 | -1 | 10 | 0.295309 | HIT family protein | |
| NCTC10437_04929 | -1 | 10 | -0.421562 | integral membrane sensor signal transduction | |
| NCTC10437_04930 | -1 | 13 | -0.828205 | response regulator with CheY-like receiver | |
| NCTC10437_04931 | -1 | 12 | -0.872342 | Uncharacterised protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04926 | DHBDHDRGNASE | 77 | 1e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04929 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04930 | HTHFIS | 107 | 3e-29 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04931 | RTXTOXINA | 29 | 0.022 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 96 | NCTC10437_04949 | NCTC10437_04962 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_04949 | 1 | 10 | 1.183560 | Putative transcriptional regulator, TetR family | |
| NCTC10437_04950 | -1 | 10 | 2.069347 | major facilitator superfamily transporter | |
| NCTC10437_04951 | 0 | 11 | 1.702695 | short chain dehydrogenase | |
| NCTC10437_04952 | 0 | 12 | 1.010054 | enoyl-CoA hydratase/carnithine racemase | |
| NCTC10437_04953 | 1 | 13 | 1.166749 | Uncharacterised protein | |
| NCTC10437_04954 | 0 | 11 | 0.547225 | alpha,alpha-trehalose-phosphate synthase | |
| NCTC10437_04955 | 0 | 10 | 0.392761 | Uncharacterised protein | |
| NCTC10437_04956 | -1 | 10 | -1.285400 | MCE-associated protein | |
| NCTC10437_04957 | -1 | 11 | -1.350645 | Mce associated alanine and valine rich protein | |
| NCTC10437_04958 | -1 | 10 | -1.230495 | virulence factor Mce family protein | |
| NCTC10437_04959 | -1 | 11 | -2.038474 | virulence factor Mce family protein | |
| NCTC10437_04960 | -2 | 11 | -1.923617 | virulence factor Mce family protein | |
| NCTC10437_04961 | 0 | 11 | -1.743121 | virulence factor Mce family protein | |
| NCTC10437_04962 | 0 | 10 | -1.819947 | virulence factor Mce family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04949 | HTHTETR | 57 | 2e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04950 | TCRTETB | 62 | 2e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04951 | DHBDHDRGNASE | 103 | 2e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04955 | cloacin | 42 | 6e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04958 | TONBPROTEIN | 40 | 1e-05 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04959 | adhesinmafb | 29 | 0.041 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_04962 | RTXTOXINA | 29 | 0.036 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 97 | NCTC10437_05058 | NCTC10437_05065 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05058 | 1 | 11 | 0.210756 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_05059 | 1 | 8 | 0.178031 | general substrate transporter | |
| NCTC10437_05060 | 0 | 9 | 1.031206 | transcriptional regulator | |
| NCTC10437_05061 | -1 | 11 | -0.119766 | lysophospholipase | |
| NCTC10437_05062 | -1 | 10 | -0.877461 | TetR family transcriptional regulator | |
| NCTC10437_05063 | -1 | 9 | -2.013239 | Protein of uncharacterised function (DUF2867) | |
| NCTC10437_05064 | -1 | 8 | -2.017145 | phospholipid/glycerol acyltransferase | |
| NCTC10437_05065 | 1 | 8 | -1.865174 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05058 | DHBDHDRGNASE | 77 | 7e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05059 | TCRTETA | 35 | 7e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05062 | HTHTETR | 53 | 3e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05065 | HTHTETR | 58 | 1e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 98 | NCTC10437_05287 | NCTC10437_05292 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05287 | -2 | 8 | 0.274362 | D-amino acid aminohydrolase | |
| NCTC10437_05288 | -2 | 10 | 0.024734 | Rieske (2Fe-2S) domain-containing protein | |
| NCTC10437_05289 | -1 | 11 | 0.834162 | transcriptional regulator | |
| NCTC10437_05290 | 0 | 10 | 0.720997 | LysR family transcriptional regulator | |
| NCTC10437_05291 | 0 | 10 | 0.450009 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_05292 | 1 | 11 | 0.957321 | dehydrogenase of uncharacterised specificity, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05287 | UREASE | 59 | 2e-11 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05289 | TETREPRESSOR | 74 | 2e-18 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05291 | DHBDHDRGNASE | 106 | 4e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05292 | DHBDHDRGNASE | 106 | 7e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 99 | NCTC10437_05591 | NCTC10437_05600 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05591 | -1 | 9 | 1.615483 | HNH nuclease | |
| NCTC10437_05592 | -2 | 9 | 1.657809 | luciferase family protein | |
| NCTC10437_05593 | -1 | 8 | 2.225999 | amidase | |
| NCTC10437_05594 | 0 | 10 | 1.193898 | short-chain dehydrogenase | |
| NCTC10437_05595 | 0 | 12 | 0.771349 | TetR family transcriptional regulator | |
| NCTC10437_05596 | -1 | 14 | 0.047629 | dehydrogenase | |
| NCTC10437_05597 | -1 | 12 | 0.881523 | inner membrane protein yidH | |
| NCTC10437_05598 | 0 | 11 | 0.863276 | Uncharacterised protein | |
| NCTC10437_05599 | -1 | 10 | 0.722520 | enoyl-CoA hydratase/isomerase | |
| NCTC10437_05600 | -1 | 9 | 0.525203 | transcriptional regulator containing an amidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05591 | V8PROTEASE | 33 | 0.002 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05594 | DHBDHDRGNASE | 76 | 2e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05595 | HTHTETR | 62 | 3e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05596 | DHBDHDRGNASE | 129 | 1e-38 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05600 | HTHTETR | 28 | 0.029 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 100 | NCTC10437_05631 | NCTC10437_05637 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05631 | -2 | 10 | 0.531375 | nucleoside-diphosphate-sugar epimerase | |
| NCTC10437_05632 | -1 | 9 | 0.511795 | transcriptional regulator | |
| NCTC10437_05633 | -1 | 9 | 1.216146 | histidine kinase with cyclic nucleotide-binding | |
| NCTC10437_05634 | -1 | 11 | 1.652378 | dTDP-4-dehydrorhamnose reductase | |
| NCTC10437_05635 | -2 | 9 | 1.616402 | esterase/lipase | |
| NCTC10437_05636 | -2 | 9 | 1.626541 | Uncharacterised protein | |
| NCTC10437_05637 | -2 | 8 | 1.806317 | MMPL domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05631 | NUCEPIMERASE | 56 | 5e-11 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05632 | HTHTETR | 58 | 2e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05634 | NUCEPIMERASE | 35 | 2e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05637 | ACRIFLAVINRP | 48 | 1e-07 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 101 | NCTC10437_05654 | NCTC10437_05659 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05654 | 0 | 11 | -1.941148 | signal transduction histidine kinase | |
| NCTC10437_05655 | -1 | 9 | -0.787139 | response regulator receiver modulated | |
| NCTC10437_05656 | 0 | 6 | 1.046338 | polysaccharide deacetylase | |
| NCTC10437_05657 | -1 | 7 | 1.026550 | putative agmatinase | |
| NCTC10437_05658 | -1 | 6 | 0.964316 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_05659 | -2 | 7 | 1.118278 | short-chain dehydrogenase/reductase SDR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05654 | HTHFIS | 75 | 7e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05655 | HTHFIS | 85 | 2e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05658 | DHBDHDRGNASE | 115 | 3e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05659 | DHBDHDRGNASE | 97 | 1e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 102 | NCTC10437_05698 | NCTC10437_05707 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05698 | 0 | 17 | -2.515138 | major facilitator superfamily protein | |
| NCTC10437_05699 | -1 | 20 | -3.088035 | flavin-dependent oxidoreductase, F420-dependent | |
| NCTC10437_05700 | -2 | 17 | -3.114985 | Predicted flavin-nucleotide-binding protein | |
| NCTC10437_05701 | -2 | 17 | -3.155978 | alpha/beta hydrolase fold protein | |
| NCTC10437_05702 | -2 | 15 | -2.127616 | aldo/keto reductase | |
| NCTC10437_05703 | 0 | 16 | -2.210830 | short-chain dehydrogenase/reductase SDR | |
| NCTC10437_05704 | -1 | 10 | -1.699778 | TetR family transcriptional regulator | |
| NCTC10437_05705 | -1 | 9 | -1.666392 | MerR family transcriptional regulator | |
| NCTC10437_05706 | 0 | 10 | -1.552872 | Uncharacterised protein | |
| NCTC10437_05707 | 2 | 12 | -1.108661 | short-chain dehydrogenase/reductase SDR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05698 | TCRTETB | 43 | 2e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05702 | INTIMIN | 31 | 0.007 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05703 | DHBDHDRGNASE | 116 | 1e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05704 | HTHTETR | 47 | 7e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05707 | DHBDHDRGNASE | 79 | 2e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 103 | NCTC10437_05723 | NCTC10437_05728 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| NCTC10437_05723 | 2 | 8 | -0.923232 | dehydrogenase of uncharacterised specificity, | |
| NCTC10437_05724 | 2 | 7 | -0.787709 | TetR family transcriptional regulator | |
| NCTC10437_05725 | 2 | 7 | -0.794427 | acetyltransferase | |
| NCTC10437_05726 | 3 | 8 | -1.169979 | alpha/beta hydrolase fold protein | |
| NCTC10437_05727 | 1 | 7 | -1.306058 | WD40 domain-containing protein | |
| NCTC10437_05728 | 2 | 7 | -1.148102 | WD40 domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05723 | DHBDHDRGNASE | 119 | 1e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05724 | HTHTETR | 48 | 4e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05726 | NEISSPPORIN | 28 | 0.042 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05727 | IGASERPTASE | 32 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| NCTC10437_05728 | TONBPROTEIN | 34 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||