| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | D364_RS00220 | D364_RS00335 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS00220 | 2 | 13 | 0.855319 | co-chaperone DjlA | |
| D364_RS00225 | 1 | 16 | 1.463700 | response regulator | |
| D364_RS00230 | 0 | 17 | 1.910492 | sensor histidine kinase | |
| D364_RS00235 | 0 | 18 | 2.389179 | 2-hydroxycarboxylate transporter family protein | |
| D364_RS00245 | 0 | 20 | 2.383828 | citrate lyase holo-[acyl-carrier protein] | |
| D364_RS00250 | 0 | 19 | 2.678709 | bifunctional tRNA pseudouridine(32) synthase/23S | |
| D364_RS00255 | 0 | 18 | 2.654928 | RNA polymerase-associated protein RapA | |
| D364_RS00260 | -2 | 15 | 2.691285 | DNA polymerase II | |
| D364_RS00265 | 1 | 15 | 3.031495 | L-ribulose-5-phosphate 4-epimerase | |
| D364_RS00270 | 3 | 15 | 3.775141 | L-arabinose isomerase | |
| D364_RS00275 | 3 | 14 | 3.757734 | ribulokinase | |
| D364_RS00285 | 4 | 13 | 3.069288 | arabinose operon transcriptional regulator AraC | |
| D364_RS00290 | 4 | 12 | 2.930785 | DedA family protein | |
| D364_RS00295 | 4 | 12 | 2.764140 | thiamine ABC transporter ATP-binding protein | |
| D364_RS00300 | 1 | 9 | 0.691351 | thiamine/thiamine pyrophosphate ABC transporter | |
| D364_RS00305 | 0 | 11 | -2.252688 | thiamine ABC transporter substrate binding | |
| D364_RS00310 | 0 | 12 | -2.387563 | HTH-type transcriptional regulator SgrR | |
| D364_RS00315 | -1 | 12 | -4.384139 | glucose uptake inhibitor SgrT | |
| D364_RS00325 | -1 | 10 | -3.902600 | MFS transporter | |
| D364_RS00330 | 0 | 14 | -4.668657 | MFS transporter | |
| D364_RS00335 | 0 | 11 | -4.123491 | LysR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00225 | HTHFIS | 63 | 8e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00255 | BCTERIALGSPD | 31 | 0.019 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00290 | PHPHTRNFRASE | 28 | 0.048 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00310 | NEISSPPORIN | 37 | 2e-04 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00325 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00330 | TCRTETA | 61 | 3e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 2 | D364_RS00560 | D364_RS27235 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS00560 | 2 | 31 | -2.509589 | MFS transporter | |
| D364_RS00565 | 3 | 34 | -2.239447 | aromatic amino acid transporter AroP | |
| D364_RS00575 | 4 | 33 | -2.314623 | pyruvate dehydrogenase complex transcriptional | |
| D364_RS00580 | 2 | 29 | -1.587534 | pyruvate dehydrogenase (acetyl-transferring), | |
| D364_RS00585 | 0 | 25 | -0.302789 | pyruvate dehydrogenase complex | |
| D364_RS00590 | -1 | 20 | -0.292045 | dihydrolipoyl dehydrogenase | |
| D364_RS00595 | -3 | 13 | -0.590988 | hypothetical protein | |
| D364_RS00600 | -3 | 13 | -1.022948 | DUF2950 family protein | |
| D364_RS00605 | -1 | 13 | -1.928368 | DUF3300 domain-containing protein | |
| D364_RS00615 | -1 | 15 | -3.014207 | bifunctional aconitate hydratase | |
| D364_RS00620 | 1 | 20 | -5.464322 | protein YacL | |
| D364_RS00625 | -1 | 17 | -3.141758 | adenosylmethionine decarboxylase | |
| D364_RS00630 | -2 | 13 | -1.043659 | polyamine aminopropyltransferase | |
| D364_RS00635 | -1 | 14 | -0.872403 | FKBP-type peptidyl-prolyl cis-trans isomerase | |
| D364_RS00640 | -1 | 15 | -0.177345 | hypothetical protein | |
| D364_RS00645 | 0 | 13 | -0.226287 | YacC family pilotin-like protein | |
| D364_RS00650 | 0 | 13 | -0.230036 | multicopper oxidase CueO | |
| D364_RS00655 | 0 | 16 | -1.337618 | glucose/quinate/shikimate family membrane-bound | |
| D364_RS27235 | 2 | 12 | -2.845961 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00585 | RTXTOXIND | 36 | 6e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00635 | INFPOTNTIATR | 55 | 8e-11 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| 3 | D364_RS00715 | D364_RS00860 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS00715 | 1 | 11 | 4.095123 | polynucleotide adenylyltransferase PcnB | |
| D364_RS00720 | 2 | 12 | 4.896968 | tRNA glutamyl-Q(34) synthetase GluQRS | |
| D364_RS00725 | 2 | 13 | 5.530097 | RNA polymerase-binding protein DksA | |
| D364_RS00730 | 4 | 17 | 6.696522 | DNA/RNA nuclease SfsA | |
| D364_RS00735 | 7 | 19 | 8.593306 | RNA 2',3'-cyclic phosphodiesterase | |
| D364_RS00740 | 7 | 19 | 8.543021 | ATP-dependent helicase HrpB | |
| D364_RS00745 | 6 | 21 | 7.954679 | A24 family peptidase | |
| D364_RS00750 | 6 | 22 | 8.033545 | type II secretion system protein N | |
| D364_RS00755 | 5 | 23 | 7.850772 | type II secretion system protein M | |
| D364_RS00760 | 3 | 23 | 7.067034 | type II secretion system protein GspL | |
| D364_RS00765 | 3 | 24 | 6.851746 | type II secretion system minor pseudopilin GspK | |
| D364_RS00770 | 4 | 23 | 6.961594 | type II secretion system minor pseudopilin GspJ | |
| D364_RS00775 | 0 | 20 | 4.677759 | type II secretion system minor pseudopilin GspI | |
| D364_RS00780 | -2 | 18 | 3.334144 | type II secretion system minor pseudopilin GspH | |
| D364_RS00785 | -2 | 18 | 2.314383 | type II secretion system major pseudopilin GspG | |
| D364_RS00790 | -1 | 15 | 2.122476 | type II secretion system inner membrane protein | |
| D364_RS00795 | -1 | 14 | 1.441440 | type II secretion system ATPase GspE | |
| D364_RS00800 | -1 | 13 | -0.055300 | GspD family T2SS secretin variant PulD | |
| D364_RS00805 | 0 | 14 | -0.585212 | type II secretion system protein GspC | |
| D364_RS27240 | 1 | 13 | 1.031304 | hypothetical protein | |
| D364_RS00815 | 2 | 13 | 1.186294 | pullulanase-type alpha-1,6-glucosidase | |
| D364_RS00820 | 0 | 14 | 1.316895 | type II secretion system assembly factor GspB | |
| D364_RS00825 | 0 | 13 | 1.557668 | type II secretion system pilot lipoprotein GspS | |
| D364_RS27245 | 0 | 15 | 3.158895 | hypothetical protein | |
| D364_RS00840 | 0 | 16 | 3.640354 | bifunctional glycosyl | |
| D364_RS00845 | -1 | 14 | 3.666622 | ferrichrome porin FhuA | |
| D364_RS00850 | 1 | 15 | 4.337298 | Fe3+-hydroxamate ABC transporter ATP-binding | |
| D364_RS00855 | 0 | 14 | 4.014611 | Fe(3+)-hydroxamate ABC transporter | |
| D364_RS00860 | 0 | 14 | 3.682168 | Fe(3+)-hydroxamate ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00745 | PREPILNPTASE | 271 | 2e-93 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00770 | BCTERIALGSPG | 33 | 3e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00775 | BCTERIALGSPG | 32 | 2e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00780 | BCTERIALGSPH | 177 | 1e-59 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00785 | BCTERIALGSPG | 243 | 2e-86 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00790 | BCTERIALGSPF | 512 | 0.0 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00800 | BCTERIALGSPD | 839 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00805 | BCTERIALGSPC | 213 | 7e-71 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00855 | FERRIBNDNGPP | 430 | e-155 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 4 | D364_RS00910 | D364_RS00970 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS00910 | 3 | 22 | -2.598900 | DUF3461 family protein | |
| D364_RS00915 | 2 | 24 | -2.273697 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | |
| D364_RS00920 | 3 | 24 | -2.606434 | bifunctional | |
| D364_RS00925 | 3 | 31 | -3.568981 | type I methionyl aminopeptidase | |
| D364_RS00930 | 3 | 30 | -3.571285 | 30S ribosomal protein S2 | |
| D364_RS00935 | 1 | 21 | -2.601206 | elongation factor Ts | |
| D364_RS00940 | -1 | 19 | -2.154726 | UMP kinase | |
| D364_RS00945 | 0 | 18 | -2.678484 | ribosome recycling factor | |
| D364_RS00950 | 0 | 17 | -2.813638 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | |
| D364_RS00955 | 1 | 19 | -3.564159 | (2E,6E)-farnesyl-diphosphate-specific | |
| D364_RS00960 | 1 | 19 | -3.573044 | phosphatidate cytidylyltransferase | |
| D364_RS00965 | 2 | 21 | -3.953510 | sigma E protease regulator RseP | |
| D364_RS00970 | 2 | 21 | -3.113103 | outer membrane protein assembly factor BamA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00940 | CARBMTKINASE | 30 | 0.009 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 5 | D364_RS01050 | D364_RS01155 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS01050 | 2 | 13 | -1.257644 | envelope stress response activation lipoprotein | |
| D364_RS01055 | 0 | 15 | -1.414963 | YaeF family permuted papain-like enzyme | |
| D364_RS01060 | -1 | 17 | -1.986215 | proline--tRNA ligase | |
| D364_RS01065 | -1 | 17 | -2.949706 | tRNA | |
| D364_RS01070 | -2 | 19 | -3.431639 | Rcs stress response system protein RcsF | |
| D364_RS01075 | -2 | 16 | -3.009241 | methionine ABC transporter substrate-binding | |
| D364_RS01080 | -2 | 14 | -1.559395 | methionine ABC transporter permease MetI | |
| D364_RS01085 | -2 | 12 | -1.379126 | methionine ABC transporter ATP-binding protein | |
| D364_RS01090 | -2 | 12 | -0.844881 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |
| D364_RS01125 | -1 | 14 | -0.936484 | ***2,5-didehydrogluconate reductase DkgB | |
| D364_RS01130 | -1 | 16 | -2.460109 | LysR family transcriptional regulator | |
| D364_RS01135 | 0 | 18 | -2.743129 | MFS transporter | |
| D364_RS01140 | 0 | 20 | -3.697140 | endonuclease/exonuclease/phosphatase family | |
| D364_RS01145 | -1 | 21 | -4.351424 | class I SAM-dependent methyltransferase | |
| D364_RS01150 | -1 | 19 | -4.299897 | murein transglycosylase D | |
| D364_RS01155 | -1 | 20 | -4.429930 | hydroxyacylglutathione hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01135 | TCRTETA | 61 | 2e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 6 | D364_RS01300 | D364_RS01475 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS01300 | 0 | 22 | 3.408554 | 4-aminobutyrate--2-oxoglutarate transaminase | |
| D364_RS01305 | -1 | 19 | 3.003308 | NADP-dependent succinate-semialdehyde | |
| D364_RS01310 | 0 | 12 | -0.312889 | L-2-hydroxyglutarate oxidase | |
| D364_RS01315 | -1 | 13 | -2.775764 | carbon starvation induced protein CsiD | |
| D364_RS01320 | 0 | 18 | -3.931576 | YjhX family toxin | |
| D364_RS01325 | 0 | 18 | -4.571484 | class I SAM-dependent methyltransferase | |
| D364_RS01330 | 1 | 21 | -6.651054 | glutathione S-transferase family protein | |
| D364_RS01335 | 1 | 23 | -7.681071 | PTS galactitol transporter subunit IIC | |
| D364_RS01340 | 1 | 23 | -6.945877 | 2-hydroxyacid dehydrogenase | |
| D364_RS01345 | 0 | 20 | -5.123733 | SDR family oxidoreductase | |
| D364_RS01350 | 0 | 21 | -3.238370 | carbohydrate kinase | |
| D364_RS01355 | -1 | 22 | -1.987066 | glycerol-3-phosphate responsive antiterminator | |
| D364_RS01360 | 0 | 22 | -0.893773 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
| D364_RS01365 | -2 | 22 | -1.404221 | Zn-finger protein | |
| D364_RS01370 | -1 | 24 | -2.283072 | dihydrolipoyl dehydrogenase | |
| D364_RS01375 | -1 | 28 | -3.528436 | 2-oxo acid dehydrogenase subunit E2 | |
| D364_RS01380 | 0 | 37 | -8.296077 | alpha-ketoacid dehydrogenase subunit beta | |
| D364_RS01385 | 1 | 45 | -10.995245 | thiamine pyrophosphate-dependent dehydrogenase | |
| D364_RS01390 | 2 | 51 | -14.286633 | AcoK | |
| D364_RS26835 | 7 | 74 | -22.535317 | hypothetical protein | |
| D364_RS26840 | 7 | 73 | -22.327555 | hypothetical protein | |
| D364_RS26845 | 6 | 62 | -17.380827 | hypothetical protein | |
| D364_RS25685 | 6 | 55 | -15.033241 | hypothetical protein | |
| D364_RS01395 | 7 | 54 | -13.529700 | winged helix-turn-helix domain-containing | |
| D364_RS01400 | 8 | 53 | -12.070544 | type 1 fimbrial protein | |
| D364_RS01405 | 8 | 53 | -11.711846 | type 1 fimbrial protein | |
| D364_RS01410 | 8 | 51 | -11.929330 | outer membrane usher protein | |
| D364_RS01415 | 8 | 55 | -14.418803 | fimbria/pilus periplasmic chaperone | |
| D364_RS01420 | 9 | 62 | -16.336989 | hypothetical protein | |
| D364_RS01425 | 9 | 63 | -17.417677 | fimbrial protein | |
| D364_RS26850 | 6 | 58 | -15.317011 | hypothetical protein | |
| D364_RS26855 | 0 | 19 | -4.234034 | hypothetical protein | |
| D364_RS25690 | -1 | 15 | -2.300286 | helix-turn-helix transcriptional regulator | |
| D364_RS27250 | -1 | 14 | -1.336174 | hypothetical protein | |
| D364_RS01440 | -3 | 13 | -0.275265 | tyrosine-type recombinase/integrase | |
| D364_RS01450 | -1 | 17 | 2.156176 | *glutamate-5-semialdehyde dehydrogenase | |
| D364_RS01455 | -2 | 16 | 1.825044 | glutamate 5-kinase | |
| D364_RS01465 | -1 | 16 | 1.749157 | phosphoporin PhoE | |
| D364_RS01470 | 2 | 19 | 3.584899 | lipoprotein | |
| D364_RS01475 | 1 | 17 | 3.195912 | DMT family transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01345 | DHBDHDRGNASE | 100 | 1e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01375 | RTXTOXIND | 31 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01410 | PF00577 | 718 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01425 | FIMBRIALPAPF | 40 | 9e-07 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25690 | TETREPRESSOR | 28 | 0.004 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01455 | CARBMTKINASE | 38 | 4e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01465 | ECOLIPORIN | 536 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 7 | D364_RS01525 | D364_RS01620 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS01525 | -1 | 19 | 3.160865 | fimbrial biogenesis outer membrane usher | |
| D364_RS01530 | -2 | 19 | 2.875647 | fimbrial adhesin EcpD | |
| D364_RS01535 | 0 | 19 | 4.512380 | fimbria/pilus periplasmic chaperone | |
| D364_RS01540 | -1 | 20 | 4.448893 | amino acid ABC transporter permease | |
| D364_RS01545 | -1 | 21 | 3.386486 | amino acid ABC transporter permease | |
| D364_RS01550 | -1 | 22 | 2.537766 | amino acid ABC transporter ATP-binding protein | |
| D364_RS01555 | -1 | 22 | 1.750998 | ABC transporter substrate-binding protein | |
| D364_RS26865 | 0 | 22 | 1.349816 | hypothetical protein | |
| D364_RS01565 | 0 | 21 | 0.863592 | ABC transporter ATP-binding protein | |
| D364_RS01570 | 1 | 20 | 1.570578 | ABC transporter ATP-binding protein | |
| D364_RS01575 | -1 | 19 | 2.205160 | branched-chain amino acid ABC transporter | |
| D364_RS01580 | 0 | 19 | 3.058776 | branched-chain amino acid ABC transporter | |
| D364_RS01585 | 0 | 18 | 3.587678 | ABC transporter substrate-binding protein | |
| D364_RS27260 | 0 | 16 | 3.911204 | hypothetical protein | |
| D364_RS01595 | 0 | 17 | 5.225315 | ethanolamine ammonia-lyase subunit EutC | |
| D364_RS01600 | -1 | 17 | 4.610926 | ethanolamine ammonia-lyase subunit EutB | |
| D364_RS01605 | 0 | 17 | 4.572964 | ethanolamine permease | |
| D364_RS27265 | 0 | 17 | 4.491599 | hypothetical protein | |
| D364_RS01615 | -1 | 17 | 4.044724 | S-methylmethionine permease | |
| D364_RS01620 | -1 | 15 | 4.073764 | homocysteine S-methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01525 | PF00577 | 66 | 3e-13 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01580 | FERRIBNDNGPP | 29 | 0.018 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 8 | D364_RS01815 | D364_RS01875 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS01815 | 1 | 19 | -4.800493 | class II fructose-1,6-bisphosphate aldolase | |
| D364_RS01820 | 2 | 16 | -4.415146 | kinase | |
| D364_RS01825 | 2 | 17 | -3.386823 | PTS ascorbate transporter subunit IIC | |
| D364_RS01830 | 1 | 13 | -2.475140 | PTS sugar transporter subunit IIB | |
| D364_RS01835 | 2 | 12 | -1.974057 | PTS sugar transporter subunit IIA | |
| D364_RS01845 | 2 | 16 | -1.553617 | peroxiredoxin | |
| D364_RS01850 | 2 | 16 | -1.098568 | ACP phosphodiesterase | |
| D364_RS27270 | 3 | 20 | -1.484758 | hypothetical protein | |
| D364_RS01860 | 3 | 19 | -1.165335 | tRNA preQ1(34) S-adenosylmethionine | |
| D364_RS01865 | 2 | 18 | -0.889636 | tRNA guanosine(34) transglycosylase Tgt | |
| D364_RS01870 | 2 | 21 | -1.011973 | preprotein translocase subunit YajC | |
| D364_RS01875 | 2 | 18 | -0.421322 | protein translocase subunit SecD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01875 | SECFTRNLCASE | 70 | 5e-15 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| 9 | D364_RS01975 | D364_RS02120 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS01975 | -2 | 15 | 3.691351 | YajQ family cyclic di-GMP-binding protein | |
| D364_RS01980 | -2 | 15 | 4.135509 | MFS transporter | |
| D364_RS01985 | -2 | 14 | 5.024469 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS01990 | -2 | 14 | 5.711334 | aromatic acid/H+ symport family MFS transporter | |
| D364_RS01995 | -1 | 14 | 6.057419 | sugar phosphate isomerase/epimerase | |
| D364_RS02000 | 0 | 14 | 5.293547 | FAD-dependent oxidoreductase | |
| D364_RS02005 | -1 | 13 | 2.746605 | NIPSNAP family protein | |
| D364_RS02010 | 0 | 13 | 2.236299 | FAD-dependent oxidoreductase | |
| D364_RS02015 | 2 | 13 | -0.642818 | shikimate dehydrogenase | |
| D364_RS02020 | 3 | 22 | -3.423140 | helix-turn-helix domain-containing protein | |
| D364_RS02025 | 4 | 27 | -5.051189 | hypothetical protein | |
| D364_RS02030 | 2 | 22 | -3.473912 | heme o synthase | |
| D364_RS02035 | 2 | 23 | -3.524355 | cytochrome o ubiquinol oxidase subunit IV | |
| D364_RS02040 | 1 | 22 | -3.446088 | cytochrome o ubiquinol oxidase subunit III | |
| D364_RS02045 | 2 | 25 | -3.633568 | cytochrome o ubiquinol oxidase subunit I | |
| D364_RS02050 | 2 | 20 | -3.311220 | cytochrome o ubiquinol oxidase subunit II | |
| D364_RS02055 | 3 | 20 | -2.183334 | muropeptide MFS transporter AmpG | |
| D364_RS02060 | 4 | 23 | -3.312019 | lipoprotein | |
| D364_RS02065 | 5 | 25 | -3.656390 | transcriptional regulator BolA | |
| D364_RS02070 | 4 | 23 | -2.849137 | trigger factor | |
| D364_RS02075 | 1 | 19 | -2.324978 | ATP-dependent Clp endopeptidase proteolytic | |
| D364_RS02080 | 2 | 18 | -2.410337 | ATP-dependent protease ATP-binding subunit ClpX | |
| D364_RS02085 | 1 | 16 | -2.189389 | endopeptidase La | |
| D364_RS02090 | 3 | 11 | -0.116158 | DNA-binding protein HU-beta | |
| D364_RS02095 | 2 | 11 | 0.165018 | peptidylprolyl isomerase | |
| D364_RS02100 | 0 | 11 | 0.934402 | helix-hairpin-helix domain-containing protein | |
| D364_RS02105 | 0 | 10 | 0.549370 | YbgC/FadM family acyl-CoA thioesterase | |
| D364_RS02110 | 2 | 9 | 1.457657 | 7-cyano-7-deazaguanine synthase QueC | |
| D364_RS02115 | 3 | 11 | 2.325983 | SgrR family transcriptional regulator | |
| D364_RS02120 | 2 | 12 | 1.502331 | HMP-PP phosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01980 | TCRTETA | 83 | 1e-19 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01990 | TCRTETB | 51 | 7e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02055 | TCRTETB | 38 | 5e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02085 | GPOSANCHOR | 34 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02090 | DNABINDINGHU | 116 | 4e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02120 | HTHFIS | 29 | 0.024 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 10 | D364_RS02280 | D364_RS02345 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS02280 | 2 | 16 | -4.059797 | YlaC family protein | |
| D364_RS27275 | 2 | 18 | -3.721087 | hypothetical protein | |
| D364_RS02290 | 1 | 18 | -4.029612 | maltose O-acetyltransferase | |
| D364_RS02295 | 1 | 13 | -2.928275 | hemolysin expression modulator Hha | |
| D364_RS02300 | 1 | 12 | -2.183507 | Hha toxicity modulator TomB | |
| D364_RS02305 | 1 | 13 | -1.824594 | multidrug efflux RND transporter permease | |
| D364_RS02310 | 2 | 12 | -1.110592 | multidrug efflux RND transporter periplasmic | |
| D364_RS02315 | 3 | 12 | -0.812223 | multidrug efflux transporter transcriptional | |
| D364_RS02320 | 3 | 13 | -0.160091 | mechanosensitive channel MscK | |
| D364_RS02325 | 4 | 15 | 2.572245 | Rpn family recombination-promoting | |
| D364_RS02330 | 4 | 15 | 2.402799 | pleiotropic regulatory protein RsmS | |
| D364_RS02335 | 3 | 16 | 3.414070 | primosomal replication protein N'' | |
| D364_RS02340 | 2 | 14 | 1.286724 | DUF454 family protein | |
| D364_RS02345 | 2 | 16 | 1.177347 | adenine phosphoribosyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02305 | ACRIFLAVINRP | 1365 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02310 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02315 | HTHTETR | 185 | 2e-61 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02320 | GPOSANCHOR | 47 | 4e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 11 | D364_RS02585 | D364_RS02685 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS02585 | 1 | 14 | -3.816730 | type 1 fimbrial protein | |
| D364_RS02590 | 1 | 16 | -4.535001 | GNAT family N-acetyltransferase | |
| D364_RS02595 | -1 | 16 | -2.535139 | LpxL/LpxP family Kdo(2)-lipid IV(A) | |
| D364_RS02600 | 1 | 19 | -2.715402 | DUF1471 domain-containing protein | |
| D364_RS02605 | 0 | 18 | -2.571797 | lysine decarboxylation/transport transcriptional | |
| D364_RS02610 | 0 | 20 | -1.581744 | cadaverine/lysine antiporter | |
| D364_RS02615 | 0 | 18 | -0.371625 | lysine decarboxylase CadA | |
| D364_RS02620 | -2 | 13 | 2.320677 | dipeptide permease DtpD | |
| D364_RS02625 | -2 | 13 | 2.849126 | lysine--tRNA ligase | |
| D364_RS02630 | 0 | 19 | 4.840019 | hypothetical protein | |
| D364_RS02635 | 0 | 18 | 4.000821 | myo-inosose-2 dehydratase | |
| D364_RS02640 | 1 | 17 | 2.460829 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS02645 | 3 | 18 | 2.012817 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS02650 | 3 | 18 | 2.082171 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS02655 | 2 | 18 | 1.560845 | LacI family DNA-binding transcriptional | |
| D364_RS02660 | 3 | 17 | 1.930328 | sugar ABC transporter substrate-binding protein | |
| D364_RS02665 | 2 | 18 | 2.773604 | sugar ABC transporter ATP-binding protein | |
| D364_RS02670 | 1 | 20 | 3.529784 | ABC transporter permease | |
| D364_RS02680 | 0 | 21 | 4.719856 | hypothetical protein | |
| D364_RS02685 | 0 | 21 | 3.234491 | LacI family DNA-binding transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02590 | SACTRNSFRASE | 30 | 0.008 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02620 | TCRTETA | 29 | 0.030 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02635 | PF08280 | 31 | 0.008 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
| 12 | D364_RS02750 | D364_RS02790 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS02750 | 2 | 13 | -0.694564 | hypothetical protein | |
| D364_RS02755 | 2 | 10 | 0.825978 | RcnB family protein | |
| D364_RS27290 | 2 | 10 | 0.740333 | hypothetical protein | |
| D364_RS27295 | 2 | 13 | 2.457659 | hypothetical protein | |
| D364_RS02770 | 2 | 14 | 2.233518 | amidohydrolase | |
| D364_RS02775 | 1 | 14 | 2.691659 | ABC transporter substrate-binding protein | |
| D364_RS02780 | 1 | 14 | 2.466533 | aldo/keto reductase | |
| D364_RS02785 | 1 | 14 | 3.313910 | MoaF N-terminal domain-containing protein | |
| D364_RS02790 | 1 | 11 | 3.564201 | SDR family oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02790 | DHBDHDRGNASE | 90 | 1e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 13 | D364_RS02875 | D364_RS03100 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS02875 | 2 | 16 | 3.335882 | sugar phosphate isomerase/epimerase | |
| D364_RS02880 | 2 | 17 | 3.548637 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS02885 | 1 | 16 | 3.112784 | Exc2 family lipoprotein | |
| D364_RS02890 | -1 | 13 | -0.162745 | LacI family transcriptional regulator | |
| D364_RS02895 | 0 | 12 | -1.145852 | mechanosensitive ion channel family protein | |
| D364_RS02900 | 0 | 12 | -1.114575 | MFS transporter | |
| D364_RS02905 | 1 | 15 | -2.831288 | helix-turn-helix transcriptional regulator | |
| D364_RS02910 | 1 | 18 | -3.831408 | DUF2157 domain-containing protein | |
| D364_RS02915 | 1 | 21 | -4.954017 | sigma-54-dependent transcriptional regulator | |
| D364_RS02920 | 0 | 19 | -3.633638 | SIS domain-containing protein | |
| D364_RS02925 | -2 | 16 | -3.047120 | SIS domain-containing protein | |
| D364_RS02930 | -2 | 14 | -3.005237 | PTS system mannose/fructose/sorbose family | |
| D364_RS02935 | -3 | 15 | -2.195311 | PTS | |
| D364_RS02940 | -2 | 11 | -1.054660 | PTS sugar transporter subunit IIB | |
| D364_RS02945 | -2 | 13 | -0.725558 | PTS sugar transporter subunit IIA | |
| D364_RS02950 | -2 | 15 | -0.150436 | oxygen-insensitive NAD(P)H nitroreductase | |
| D364_RS02955 | -1 | 15 | 1.979348 | MmcQ/YjbR family DNA-binding protein | |
| D364_RS02960 | -1 | 15 | 3.189685 | TetR/AcrR family transcriptional regulator | |
| D364_RS02965 | 1 | 19 | 4.642961 | MBL fold metallo-hydrolase | |
| D364_RS02970 | 1 | 21 | 4.914612 | RamA family antibiotic efflux transcriptional | |
| D364_RS02975 | 2 | 21 | 5.022894 | DUF1158 domain-containing protein | |
| D364_RS02985 | 1 | 20 | 5.226835 | cation-transporting P-type ATPase | |
| D364_RS02990 | 1 | 19 | 5.851499 | efflux RND transporter periplasmic adaptor | |
| D364_RS02995 | 2 | 19 | 5.546731 | efflux RND transporter permease subunit | |
| D364_RS03000 | -1 | 14 | 3.473036 | phosphodiester glycosidase family protein | |
| D364_RS03005 | -1 | 14 | 3.403162 | glutamate--cysteine ligase | |
| D364_RS03010 | -1 | 15 | 2.124800 | DMT family transporter | |
| D364_RS03015 | -1 | 16 | 1.295974 | PLP-dependent aminotransferase family protein | |
| D364_RS03020 | -1 | 16 | 0.570632 | PLP-dependent aminotransferase family protein | |
| D364_RS03025 | -1 | 17 | 0.368185 | transporter substrate-binding domain-containing | |
| D364_RS03030 | -2 | 18 | 1.680510 | amino acid ABC transporter permease | |
| D364_RS03035 | -1 | 18 | -1.426679 | ABC transporter permease subunit | |
| D364_RS03040 | -1 | 19 | -2.470185 | amino acid ABC transporter ATP-binding protein | |
| D364_RS03045 | 0 | 24 | -4.189289 | SDR family NAD(P)-dependent oxidoreductase | |
| D364_RS03050 | 1 | 30 | -6.286873 | aspartate aminotransferase family protein | |
| D364_RS27300 | 1 | 39 | -7.944981 | hypothetical protein | |
| D364_RS03065 | -1 | 31 | -5.707511 | AraC family transcriptional regulator | |
| D364_RS03070 | -3 | 20 | -1.500849 | aldo/keto reductase | |
| D364_RS03075 | 0 | 14 | 1.870439 | isochorismatase family protein | |
| D364_RS03080 | -1 | 13 | 3.072100 | IS110 family transposase | |
| D364_RS03085 | 0 | 18 | 5.167156 | ABC transporter ATP-binding protein | |
| D364_RS03090 | 0 | 18 | 5.012607 | ABC transporter ATP-binding protein | |
| D364_RS03095 | -1 | 18 | 4.338375 | ABC transporter permease | |
| D364_RS03100 | -2 | 18 | 3.701926 | ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02900 | TCRTETB | 103 | 7e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02905 | CARBMTKINASE | 30 | 0.012 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02915 | HTHFIS | 149 | 1e-40 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02960 | HTHTETR | 57 | 3e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02990 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02995 | ACRIFLAVINRP | 915 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03045 | DHBDHDRGNASE | 84 | 2e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03075 | ISCHRISMTASE | 32 | 0.002 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 14 | D364_RS03200 | D364_RS03450 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS03200 | -1 | 16 | 3.495746 | transketolase | |
| D364_RS03205 | -1 | 19 | 6.310618 | transketolase | |
| D364_RS03210 | 0 | 20 | 6.509840 | enterobactin synthase subunit EntD | |
| D364_RS03215 | 0 | 21 | 6.787627 | siderophore enterobactin receptor FepA | |
| D364_RS03220 | 3 | 20 | 8.753009 | enterochelin esterase | |
| D364_RS03225 | 3 | 21 | 8.626252 | MbtH family NRPS accessory protein | |
| D364_RS03230 | 3 | 21 | 8.346267 | enterobactin non-ribosomal peptide synthetase | |
| D364_RS03235 | 1 | 18 | 7.251484 | iron-enterobactin ABC transporter ATP-binding | |
| D364_RS03240 | 0 | 18 | 6.505416 | iron-enterobactin ABC transporter permease | |
| D364_RS03245 | 0 | 18 | 5.674318 | Fe(3+)-siderophore ABC transporter permease | |
| D364_RS03250 | 0 | 18 | 5.086914 | enterobactin transporter EntS | |
| D364_RS03255 | 0 | 18 | 4.637292 | Fe2+-enterobactin ABC transporter | |
| D364_RS03260 | -2 | 18 | 3.823537 | isochorismate synthase EntC | |
| D364_RS03265 | -2 | 19 | 3.108156 | (2,3-dihydroxybenzoyl)adenylate synthase EntE | |
| D364_RS03270 | -1 | 19 | 2.386985 | enterobactin biosynthesis bifunctional | |
| D364_RS03275 | -1 | 17 | 1.308716 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
| D364_RS03280 | 1 | 15 | 1.040220 | proofreading thioesterase EntH | |
| D364_RS03285 | 1 | 14 | 1.720741 | carbon starvation protein CstA | |
| D364_RS03290 | -2 | 14 | 2.405227 | YbdD/YjiX family protein | |
| D364_RS03295 | -2 | 15 | 2.615792 | helix-turn-helix domain-containing protein | |
| D364_RS03300 | -1 | 16 | 3.011214 | type II toxin-antitoxin system RelE/ParE family | |
| D364_RS03305 | -1 | 17 | 3.785731 | 3-oxoacyl-ACP reductase FabG | |
| D364_RS03310 | -2 | 18 | 3.708760 | oxidoreductase | |
| D364_RS03315 | -1 | 16 | 3.858160 | sugar ABC transporter ATP-binding protein | |
| D364_RS03320 | -1 | 16 | 4.264646 | ABC transporter permease | |
| D364_RS03325 | -2 | 17 | 4.207556 | sugar ABC transporter substrate-binding protein | |
| D364_RS03330 | -1 | 16 | 4.782310 | LVIVD repeat-containing protein | |
| D364_RS03335 | -2 | 18 | 5.161137 | S-methyl-5-thioribose kinase | |
| D364_RS03340 | -1 | 17 | 5.191916 | S-methyl-5-thioribose-1-phosphate isomerase | |
| D364_RS03345 | 1 | 19 | 4.791331 | histidine phosphatase family protein | |
| D364_RS03350 | 2 | 21 | 4.526187 | MFS transporter | |
| D364_RS03355 | 3 | 20 | 4.723725 | inositol monophosphatase | |
| D364_RS03360 | 2 | 20 | 5.363649 | substrate-binding domain-containing protein | |
| D364_RS03365 | 3 | 19 | 5.435524 | cytosine deaminase | |
| D364_RS03370 | 2 | 18 | 5.858679 | PucR family transcriptional regulator | |
| D364_RS03375 | 1 | 18 | 6.101363 | cytosine permease | |
| D364_RS03380 | 2 | 18 | 6.500311 | methylthioribulose 1-phosphate dehydratase | |
| D364_RS03385 | 2 | 18 | 7.003801 | carbohydrate kinase | |
| D364_RS03390 | 0 | 16 | 5.106586 | 2-hydroxyacid dehydrogenase | |
| D364_RS03395 | 1 | 15 | 5.043890 | sugar kinase | |
| D364_RS03400 | 0 | 15 | 4.386505 | ABC transporter permease | |
| D364_RS03405 | -1 | 13 | 3.618194 | ABC transporter permease | |
| D364_RS03410 | -1 | 13 | 3.347774 | sugar ABC transporter ATP-binding protein | |
| D364_RS03415 | -2 | 12 | 2.244928 | sugar ABC transporter substrate-binding protein | |
| D364_RS03420 | -3 | 12 | 2.055665 | molybdopterin-dependent oxidoreductase | |
| D364_RS03425 | -1 | 14 | -1.930363 | 1,2-dihydroxy-3-keto-5-methylthiopentene | |
| D364_RS03430 | -1 | 14 | -2.503046 | acireductone synthase | |
| D364_RS03435 | -1 | 13 | -3.095071 | pyridoxal phosphate-dependent aminotransferase | |
| D364_RS03440 | -2 | 11 | -3.978324 | ParB/RepB/Spo0J family partition protein | |
| D364_RS03445 | -2 | 11 | -4.498295 | DUF3440 domain-containing protein | |
| D364_RS03450 | -2 | 13 | -4.162983 | LysR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03210 | ENTSNTHTASED | 175 | 1e-57 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03250 | TCRTETB | 35 | 4e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03255 | FERRIBNDNGPP | 52 | 6e-10 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03270 | ISCHRISMTASE | 425 | e-153 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03275 | DHBDHDRGNASE | 341 | e-121 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03285 | ACRIFLAVINRP | 31 | 0.014 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03305 | DHBDHDRGNASE | 135 | 8e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03350 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03370 | HTHFIS | 37 | 1e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 15 | D364_RS03715 | D364_RS03955 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS03715 | 0 | 20 | -3.313577 | glucosamine-6-phosphate deaminase | |
| D364_RS03720 | -1 | 18 | -2.557789 | PTS N-acetyl glucosamine transporter subunit | |
| D364_RS03725 | 0 | 17 | -4.410750 | glutamine--tRNA ligase | |
| D364_RS03730 | 0 | 22 | -5.159432 | methionine synthase | |
| D364_RS03735 | -1 | 19 | -3.620905 | hypothetical protein | |
| D364_RS25765 | 1 | 18 | -1.364282 | ferric iron uptake transcriptional regulator | |
| D364_RS03745 | 2 | 17 | -0.706513 | flavodoxin FldA | |
| D364_RS03755 | -1 | 13 | 0.557676 | LexA regulated protein | |
| D364_RS03760 | -2 | 14 | 3.137415 | esterase | |
| D364_RS03770 | -1 | 13 | 3.025810 | replication initiation negative regulator SeqA | |
| D364_RS03775 | -1 | 17 | 3.959818 | phosphoglucomutase | |
| D364_RS03780 | 1 | 19 | 4.521138 | hypothetical protein | |
| D364_RS03785 | 0 | 19 | 4.797041 | two-component system response regulator KdpE | |
| D364_RS03790 | 0 | 20 | 4.861604 | two-component system sensor histidine kinase | |
| D364_RS03795 | 0 | 15 | 3.915586 | potassium-transporting ATPase subunit KdpC | |
| D364_RS03800 | -1 | 17 | 3.506073 | potassium-transporting ATPase subunit KdpB | |
| D364_RS03805 | 0 | 13 | 2.891508 | potassium-transporting ATPase subunit KdpA | |
| D364_RS26825 | -1 | 12 | 2.507921 | K(+)-transporting ATPase subunit F | |
| D364_RS03810 | -1 | 12 | 2.472067 | DUF2517 family protein | |
| D364_RS03815 | 0 | 12 | 2.967438 | deoxyribodipyrimidine photo-lyase | |
| D364_RS03820 | 0 | 13 | 2.702182 | dipeptide permease DtpD | |
| D364_RS03825 | 2 | 15 | 2.163272 | type 2 GTP cyclohydrolase I | |
| D364_RS03830 | 3 | 16 | 1.894592 | 5-oxoprolinase subunit PxpB | |
| D364_RS03835 | 2 | 16 | 1.316446 | biotin-dependent carboxyltransferase family | |
| D364_RS03840 | 0 | 13 | -0.111442 | 5-oxoprolinase subunit PxpA | |
| D364_RS03845 | -1 | 15 | -1.699558 | DUF969 domain-containing protein | |
| D364_RS03850 | 0 | 16 | -2.775627 | DUF979 domain-containing protein | |
| D364_RS03855 | 2 | 18 | -1.899276 | pyroglutamyl-peptidase I | |
| D364_RS03860 | 2 | 19 | -2.294156 | endonuclease VIII | |
| D364_RS03870 | 2 | 22 | -1.973215 | citrate (Si)-synthase | |
| D364_RS03875 | 2 | 23 | -1.101374 | succinate dehydrogenase cytochrome b556 subunit | |
| D364_RS03880 | 2 | 27 | -0.725280 | succinate dehydrogenase membrane anchor subunit | |
| D364_RS03885 | 2 | 28 | -0.541000 | succinate dehydrogenase flavoprotein subunit | |
| D364_RS03890 | 1 | 27 | -1.254277 | succinate dehydrogenase iron-sulfur subunit | |
| D364_RS03895 | 1 | 28 | -0.895385 | 2-oxoglutarate dehydrogenase E1 component | |
| D364_RS03900 | 1 | 31 | -0.983383 | 2-oxoglutarate dehydrogenase complex | |
| D364_RS03905 | 0 | 28 | -1.559395 | ADP-forming succinate--CoA ligase subunit beta | |
| D364_RS03910 | 0 | 23 | -2.144675 | succinate--CoA ligase subunit alpha | |
| D364_RS03920 | 0 | 20 | -2.706761 | cytochrome ubiquinol oxidase subunit I | |
| D364_RS03925 | 1 | 20 | -2.815895 | cytochrome d ubiquinol oxidase subunit II | |
| D364_RS03930 | 8 | 24 | -2.737102 | cytochrome bd-I oxidase subunit CydX | |
| D364_RS03935 | 4 | 23 | -2.024935 | cyd operon protein YbgE | |
| D364_RS03940 | 4 | 26 | -2.344549 | tol-pal system-associated acyl-CoA thioesterase | |
| D364_RS03945 | 3 | 24 | -2.270044 | Tol-Pal system protein TolQ | |
| D364_RS03950 | 3 | 21 | -1.297376 | colicin uptake protein TolR | |
| D364_RS03955 | 3 | 19 | -1.427035 | cell envelope integrity protein TolA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03785 | HTHFIS | 88 | 2e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03790 | PF06580 | 30 | 0.044 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03820 | BACINVASINB | 29 | 0.036 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03890 | TCRTETOQM | 31 | 0.003 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03955 | IGASERPTASE | 60 | 7e-12 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 16 | D364_RS04100 | D364_RS04135 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS04100 | -1 | 18 | -3.927699 | pyridoxal phosphatase | |
| D364_RS04105 | -1 | 19 | -4.403348 | 6-phosphogluconolactonase | |
| D364_RS04110 | 1 | 24 | -7.265157 | two-component-system connector protein AriR | |
| D364_RS04115 | 2 | 26 | -7.943535 | hypothetical protein | |
| D364_RS04120 | 1 | 27 | -7.947169 | two-component-system connector protein YcgZ | |
| D364_RS04125 | 2 | 25 | -8.237088 | diguanylate phosphodiesterase | |
| D364_RS04130 | 0 | 21 | -8.312812 | MerR family transcriptional regulator | |
| D364_RS04135 | 0 | 16 | -4.455215 | helix-turn-helix transcriptional regulator |
| 17 | D364_RS04190 | D364_RS04245 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS04190 | -1 | 14 | 3.491797 | formimidoylglutamase | |
| D364_RS04200 | -1 | 15 | 3.942616 | histidine utilization repressor | |
| D364_RS27310 | -1 | 15 | 3.648783 | urocanate hydratase | |
| D364_RS27315 | -1 | 14 | 3.194019 | histidine ammonia-lyase | |
| D364_RS04215 | -1 | 12 | 3.953157 | amino acid permease | |
| D364_RS04220 | 0 | 12 | 4.181648 | kinase inhibitor | |
| D364_RS04225 | -1 | 12 | 4.985758 | adenosylmethionine--8-amino-7-oxononanoate | |
| D364_RS04235 | 1 | 11 | 4.751509 | biotin synthase BioB | |
| D364_RS04240 | 0 | 13 | 4.490629 | 8-amino-7-oxononanoate synthase | |
| D364_RS04245 | 0 | 12 | 3.334060 | malonyl-ACP O-methyltransferase BioC |
| 18 | D364_RS04915 | D364_RS05075 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS04915 | 2 | 24 | -2.820194 | dimethylsulfoxide reductase subunit B | |
| D364_RS04920 | 1 | 24 | -2.533241 | dimethyl sulfoxide reductase anchor subunit | |
| D364_RS04930 | 1 | 24 | -3.131192 | MFS transporter | |
| D364_RS04935 | 2 | 26 | -3.327680 | pyruvate formate lyase 1-activating protein | |
| D364_RS04940 | 1 | 24 | -2.252140 | formate C-acetyltransferase | |
| D364_RS04945 | -1 | 12 | -0.894714 | formate transporter FocA | |
| D364_RS04950 | 3 | 24 | -1.543800 | YcaO-like family protein | |
| D364_RS04955 | 4 | 25 | -2.338304 | DUF421 domain-containing protein | |
| D364_RS04960 | 0 | 21 | -0.249173 | 3-phosphoserine/phosphohydroxythreonine | |
| D364_RS04965 | -1 | 18 | -0.621031 | 3-phosphoshikimate 1-carboxyvinyltransferase | |
| D364_RS04970 | 0 | 19 | -0.381135 | (d)CMP kinase | |
| D364_RS04975 | 0 | 16 | 0.241147 | 30S ribosomal protein S1 | |
| D364_RS04980 | 1 | 14 | 1.787450 | integration host factor subunit beta | |
| D364_RS04985 | 1 | 14 | 2.330157 | ComEC family protein | |
| D364_RS04990 | -1 | 14 | 1.592127 | lipid A ABC transporter ATP-binding | |
| D364_RS04995 | -1 | 16 | 3.260948 | tetraacyldisaccharide 4'-kinase | |
| D364_RS05000 | 1 | 16 | 1.766629 | winged helix-turn-helix domain-containing | |
| D364_RS05005 | 1 | 16 | 0.384613 | protein YcaR | |
| D364_RS05010 | 0 | 15 | 0.288867 | 3-deoxy-manno-octulosonate cytidylyltransferase | |
| D364_RS05015 | 3 | 13 | 1.047823 | YcbJ family phosphotransferase | |
| D364_RS05020 | 2 | 13 | 0.601305 | envelope biogenesis factor ElyC | |
| D364_RS05025 | 1 | 14 | -0.173342 | tRNA uridine 5-oxyacetic acid(34) | |
| D364_RS05030 | 1 | 15 | 0.098342 | chromosome partition protein MukF | |
| D364_RS05035 | 1 | 14 | 0.170823 | chromosome partition protein MukE | |
| D364_RS05040 | 1 | 13 | -0.232845 | chromosome partition protein MukB | |
| D364_RS05045 | 1 | 16 | -1.844561 | L,D-transpeptidase | |
| D364_RS05050 | 2 | 22 | -3.090564 | YcbK family protein | |
| D364_RS05055 | 1 | 19 | -2.660281 | MBL fold metallo-hydrolase | |
| D364_RS05060 | 0 | 19 | -3.722340 | aspartate/tyrosine/aromatic aminotransferase | |
| D364_RS05065 | 1 | 19 | -4.156502 | porin OmpK35 | |
| D364_RS05070 | -1 | 21 | -4.324703 | asparagine--tRNA ligase | |
| D364_RS05075 | 0 | 23 | -4.371284 | diaminopropionate ammonia-lyase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04980 | DNABINDINGHU | 116 | 5e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04990 | ACRIFLAVINRP | 30 | 0.030 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05040 | GPOSANCHOR | 48 | 2e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05065 | ECOLIPORIN | 496 | e-179 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 19 | D364_RS05175 | D364_RS05265 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS05175 | 3 | 24 | -1.988187 | membrane integrity-associated transporter | |
| D364_RS05180 | 3 | 26 | -2.642642 | ribosome modulation factor | |
| D364_RS05185 | 2 | 23 | -2.540426 | bifunctional 3-hydroxydecanoyl-ACP | |
| D364_RS05190 | 2 | 18 | -1.497887 | Lon protease family protein | |
| D364_RS05195 | 2 | 21 | -2.314169 | macrodomain Ter protein MatP | |
| D364_RS05200 | 1 | 17 | -1.612257 | porin OmpA | |
| D364_RS05205 | 1 | 15 | -1.449680 | cell division inhibitor SulA | |
| D364_RS05210 | 0 | 15 | -1.039209 | TfoX/Sxy family DNA transformation protein | |
| D364_RS05215 | 6 | 22 | -3.185208 | TIGR01666 family membrane protein | |
| D364_RS05220 | 6 | 27 | -4.303484 | YccF domain-containing protein | |
| D364_RS05225 | 4 | 28 | -4.736856 | DNA helicase IV | |
| D364_RS05230 | 5 | 31 | -5.576412 | methylglyoxal synthase | |
| D364_RS05235 | 3 | 32 | -6.255685 | CoA-binding protein | |
| D364_RS26885 | 3 | 33 | -6.535882 | BapA prefix-like domain-containing protein | |
| D364_RS05250 | 2 | 36 | -7.332589 | TolC family outer membrane protein | |
| D364_RS05255 | 1 | 29 | -6.091482 | type I secretion system permease/ATPase | |
| D364_RS05260 | 2 | 26 | -4.902376 | HlyD family type I secretion periplasmic adaptor | |
| D364_RS05265 | 1 | 22 | -3.609380 | glycosyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05190 | HTHFIS | 33 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05200 | OUTRMMBRANEA | 579 | 0.0 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05225 | YERSSTKINASE | 30 | 0.035 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS26885 | ICENUCLEATIN | 42 | 2e-05 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05250 | RTXTOXIND | 29 | 0.046 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05260 | RTXTOXIND | 263 | 6e-86 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 20 | D364_RS05420 | D364_RS05525 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS05420 | 2 | 12 | 3.479187 | NAD(P)H:quinone oxidoreductase | |
| D364_RS27335 | 3 | 13 | 3.937252 | hypothetical protein | |
| D364_RS05430 | 1 | 14 | 5.331123 | general stress protein | |
| D364_RS05435 | 1 | 16 | 5.364523 | DMT family transporter | |
| D364_RS05440 | 0 | 17 | 5.094228 | pyrimidine utilization transport protein G | |
| D364_RS05445 | 0 | 17 | 3.910488 | pyrimidine utilization flavin reductase protein | |
| D364_RS05450 | -1 | 15 | 3.169921 | malonic semialdehyde reductase | |
| D364_RS05455 | 0 | 14 | 3.018058 | pyrimidine utilization protein D | |
| D364_RS05460 | -2 | 19 | 3.444322 | pyrimidine utilization protein C | |
| D364_RS05465 | -2 | 18 | 2.724418 | pyrimidine utilization protein B | |
| D364_RS05470 | -2 | 16 | 2.859485 | pyrimidine utilization protein A | |
| D364_RS05475 | -1 | 14 | 1.821487 | HTH-type transcriptional regulator RutR | |
| D364_RS05480 | -1 | 15 | 1.876496 | DUF1311 domain-containing protein | |
| D364_RS05485 | -1 | 16 | 1.431591 | trifunctional transcriptional regulator/proline | |
| D364_RS05490 | -1 | 14 | -0.859210 | sodium/proline symporter PutP | |
| D364_RS05495 | 0 | 11 | -1.190276 | DUF3574 domain-containing protein | |
| D364_RS05500 | -1 | 10 | -3.510538 | nucleoside transporter | |
| D364_RS05505 | -2 | 11 | -2.476026 | FTR1 family protein | |
| D364_RS05510 | -2 | 11 | -2.214224 | iron uptake system protein EfeO | |
| D364_RS05515 | -3 | 13 | -1.058777 | deferrochelatase/peroxidase EfeB | |
| D364_RS05520 | -2 | 19 | -3.492445 | phosphate starvation-inducible protein PhoH | |
| D364_RS05525 | -2 | 25 | -4.607810 | DsbA family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05465 | ISCHRISMTASE | 75 | 6e-18 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05475 | HTHTETR | 65 | 4e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05515 | PF05932 | 28 | 0.028 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| 21 | D364_RS05675 | D364_RS05780 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS05675 | 2 | 14 | 1.966435 | ribosomal protein S5-alanine | |
| D364_RS05680 | 2 | 12 | 2.759668 | YceH family protein | |
| D364_RS05685 | -2 | 22 | 2.999994 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS05690 | -1 | 21 | 2.686865 | murein biosynthesis integral membrane protein | |
| D364_RS05695 | 1 | 23 | 2.756531 | MFS transporter | |
| D364_RS05700 | 2 | 27 | 1.171463 | LysR family transcriptional regulator | |
| D364_RS27340 | 5 | 30 | 0.785786 | hypothetical protein | |
| D364_RS05705 | 4 | 28 | 0.068467 | 23S rRNA pseudouridine(955/2504/2580) synthase | |
| D364_RS05710 | 2 | 18 | -1.896355 | septum formation inhibitor Maf | |
| D364_RS05715 | 3 | 19 | -1.210717 | 23S rRNA accumulation protein YceD | |
| D364_RS05720 | 4 | 22 | -1.666655 | 50S ribosomal protein L32 | |
| D364_RS05725 | 4 | 21 | -1.335580 | phosphate acyltransferase PlsX | |
| D364_RS05730 | 2 | 20 | -0.972198 | ketoacyl-ACP synthase III | |
| D364_RS05735 | 1 | 19 | -0.604811 | ACP S-malonyltransferase | |
| D364_RS05740 | 0 | 19 | -0.849248 | 3-oxoacyl-ACP reductase FabG | |
| D364_RS05750 | 0 | 15 | 0.792897 | acyl carrier protein | |
| D364_RS05755 | 0 | 15 | 1.107977 | beta-ketoacyl-ACP synthase II | |
| D364_RS05760 | 1 | 15 | 0.336321 | aminodeoxychorismate lyase | |
| D364_RS05765 | 0 | 16 | 0.126266 | cell division protein YceG | |
| D364_RS05770 | 0 | 16 | 0.645911 | dTMP kinase | |
| D364_RS05775 | 3 | 17 | 0.641217 | DNA polymerase III subunit delta' | |
| D364_RS05780 | 2 | 17 | 0.262696 | metal-dependent hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05695 | TCRTETB | 35 | 5e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05745 | DHBDHDRGNASE | 156 | 4e-49 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05750 | TYPE4SSCAGA | 28 | 0.005 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 22 | D364_RS06150 | D364_RS06320 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS06150 | 3 | 19 | -2.041491 | type II asparaginase | |
| D364_RS06165 | 4 | 20 | -2.946022 | kdo(2)-lipid IV(A) palmitoleoyltransferase | |
| D364_RS06170 | 0 | 19 | -2.194273 | leucine efflux protein LeuE | |
| D364_RS06175 | -1 | 19 | -1.374928 | DUF2534 family protein | |
| D364_RS26895 | -1 | 18 | 0.203092 | hypothetical protein | |
| D364_RS26900 | 0 | 19 | 2.587614 | protein YoaJ | |
| D364_RS26905 | -2 | 19 | 3.537452 | YoaK family small membrane protein | |
| D364_RS06190 | 2 | 16 | 5.509382 | sensor domain-containing diguanylate cyclase | |
| D364_RS06195 | 4 | 18 | 6.811603 | DUF333 domain-containing protein | |
| D364_RS06200 | 3 | 18 | 6.461883 | DUF488 family protein | |
| D364_RS06205 | 2 | 18 | 6.370908 | DUF523 domain-containing protein | |
| D364_RS06210 | 1 | 16 | 3.597245 | CTP synthase | |
| D364_RS06215 | 1 | 18 | 2.826347 | CynX/NimT family MFS transporter | |
| D364_RS06220 | -2 | 16 | 0.201887 | helix-turn-helix transcriptional regulator | |
| D364_RS06225 | -1 | 18 | 0.028151 | DUF441 domain-containing protein | |
| D364_RS06230 | 0 | 20 | 0.495529 | YbaK/prolyl-tRNA synthetase associated | |
| D364_RS06235 | 0 | 19 | 1.010450 | glycosyltransferase family 9 protein | |
| D364_RS06240 | 1 | 17 | 3.894911 | DinI family protein | |
| D364_RS06245 | 0 | 16 | 4.782047 | translesion error-prone DNA polymerase V | |
| D364_RS06250 | 0 | 15 | 4.991962 | Y-family DNA polymerase | |
| D364_RS06255 | 0 | 15 | 5.606264 | LysR family transcriptional regulator | |
| D364_RS06260 | 0 | 13 | 5.380652 | SDR family oxidoreductase | |
| D364_RS06265 | 0 | 17 | 3.324368 | MFS transporter | |
| D364_RS06270 | 0 | 16 | -0.002056 | LysR family transcriptional regulator | |
| D364_RS27365 | 0 | 14 | -3.331337 | hypothetical protein | |
| D364_RS06280 | 1 | 12 | -3.216496 | hypothetical protein | |
| D364_RS06285 | 0 | 11 | -2.516547 | glutathione peroxidase | |
| D364_RS06290 | -1 | 11 | -2.409344 | hypothetical protein | |
| D364_RS06295 | 1 | 17 | -2.719799 | YeaH/YhbH family protein | |
| D364_RS06300 | 1 | 18 | -2.748227 | protein kinase YeaG | |
| D364_RS06305 | 1 | 20 | -1.890587 | MipA/OmpV family protein | |
| D364_RS06310 | 1 | 21 | -1.975199 | aldo/keto reductase | |
| D364_RS06315 | 2 | 22 | -2.549420 | D-hexose-6-phosphate mutarotase | |
| D364_RS06320 | 2 | 23 | -1.843885 | glyceraldehyde-3-phosphate dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06225 | PRTACTNFAMLY | 27 | 0.045 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06260 | DHBDHDRGNASE | 123 | 3e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06265 | TCRTETB | 47 | 6e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 23 | D364_RS06370 | D364_RS27370 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS06370 | -1 | 13 | 3.394780 | selenide, water dikinase SelD | |
| D364_RS06375 | -1 | 12 | 3.920311 | DNA topoisomerase III | |
| D364_RS06380 | 0 | 14 | 4.775880 | NAD(P)H-quinone oxidoreductase | |
| D364_RS06385 | 3 | 15 | 7.167712 | NADP-specific glutamate dehydrogenase | |
| D364_RS06395 | 4 | 17 | 8.659065 | pyrimidine (deoxy)nucleoside triphosphate | |
| D364_RS06400 | 4 | 17 | 8.535586 | CDP-alcohol phosphatidyltransferase family | |
| D364_RS06405 | 4 | 16 | 8.677357 | sulfurtransferase | |
| D364_RS06410 | 4 | 16 | 8.684579 | ATP-binding cassette domain-containing protein | |
| D364_RS06415 | 3 | 16 | 7.190342 | ABC transporter permease subunit | |
| D364_RS06420 | -1 | 18 | 4.871800 | ABC transporter substrate-binding protein | |
| D364_RS06425 | 0 | 19 | 3.744201 | carboxymuconolactone decarboxylase family | |
| D364_RS06430 | 0 | 18 | 4.602041 | TVP38/TMEM64 family protein | |
| D364_RS06435 | -1 | 16 | 4.739661 | TVP38/TMEM64 family protein | |
| D364_RS06440 | -1 | 16 | 5.012024 | exodeoxyribonuclease III | |
| D364_RS06445 | -1 | 16 | 5.056360 | aspartate aminotransferase family protein | |
| D364_RS06450 | 0 | 17 | 5.219193 | arginine N-succinyltransferase | |
| D364_RS06455 | -1 | 15 | 4.371195 | succinylglutamate-semialdehyde dehydrogenase | |
| D364_RS06460 | 0 | 14 | 2.756157 | N-succinylarginine dihydrolase | |
| D364_RS06465 | 0 | 13 | 0.384946 | succinylglutamate desuccinylase | |
| D364_RS06475 | 0 | 18 | -2.403035 | ATP-independent periplasmic protein-refolding | |
| D364_RS06480 | -1 | 14 | -2.415686 | excinuclease Cho | |
| D364_RS06485 | -1 | 17 | -4.075557 | ammonia-dependent NAD(+) synthetase | |
| D364_RS06490 | 1 | 17 | -6.080930 | osmotically-inducible lipoprotein OsmE | |
| D364_RS06495 | 0 | 13 | -5.399170 | PTS N,N'-diacetylchitobiose transporter subunit | |
| D364_RS27370 | -2 | 11 | -3.842183 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06410 | PF05272 | 28 | 0.029 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 24 | D364_RS06835 | D364_RS07200 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS06835 | -1 | 16 | 3.560026 | peptide ABC transporter ATP-binding protein | |
| D364_RS06840 | 1 | 14 | 4.590046 | peptide ABC transporter permease SapC | |
| D364_RS06845 | 1 | 14 | 4.463962 | putrescine ABC transporter permease SapB | |
| D364_RS06850 | 1 | 16 | 5.024685 | peptide ABC transporter substrate-binding | |
| D364_RS06855 | 2 | 16 | 5.293730 | SDR family oxidoreductase | |
| D364_RS06860 | 2 | 16 | 4.465990 | helix-turn-helix transcriptional regulator | |
| D364_RS06865 | 3 | 17 | 4.023940 | helix-turn-helix domain-containing protein | |
| D364_RS06870 | 2 | 16 | 2.628133 | amidohydrolase | |
| D364_RS06875 | 4 | 17 | 2.429241 | MFS transporter | |
| D364_RS06880 | 5 | 15 | 1.971466 | phage shock protein operon transcriptional | |
| D364_RS06885 | 4 | 19 | 2.689317 | phage shock protein PspA | |
| D364_RS06890 | 2 | 19 | 3.071713 | envelope stress response membrane protein PspB | |
| D364_RS06895 | 1 | 15 | 2.558558 | envelope stress response membrane protein PspC | |
| D364_RS06900 | 1 | 14 | 2.831347 | phage shock protein PspD | |
| D364_RS06905 | 1 | 14 | 3.008290 | YcjX family protein | |
| D364_RS06910 | 1 | 12 | 2.880562 | YcjF family protein | |
| D364_RS06915 | 2 | 11 | 2.995630 | LysR family transcriptional regulator | |
| D364_RS06920 | 2 | 13 | 3.630739 | 6-phospho-beta-glucosidase | |
| D364_RS06925 | 2 | 14 | 3.906361 | transcriptional regulator TyrR | |
| D364_RS06930 | -1 | 12 | 2.919210 | AbrB family transcriptional regulator | |
| D364_RS06935 | -1 | 11 | 1.690846 | thiol peroxidase | |
| D364_RS06940 | 1 | 14 | -2.648256 | L-Ala-D/L-Glu epimerase | |
| D364_RS06945 | 3 | 16 | -4.638234 | murein tripeptide amidase MpaA | |
| D364_RS27380 | 4 | 19 | -6.073279 | hypothetical protein | |
| D364_RS06955 | 3 | 20 | -4.354407 | peptide ABC transporter substrate-binding | |
| D364_RS06960 | 2 | 27 | -5.824924 | hypothetical protein | |
| D364_RS06965 | 2 | 29 | -5.637151 | hypothetical protein | |
| D364_RS06970 | 1 | 23 | -2.811480 | LysR family transcriptional regulator | |
| D364_RS06975 | -1 | 20 | -1.403614 | alpha/beta hydrolase | |
| D364_RS06980 | -1 | 21 | -0.201797 | MFS transporter | |
| D364_RS06985 | 0 | 24 | -6.014123 | aldo/keto reductase | |
| D364_RS06995 | 0 | 22 | -4.993483 | hypothetical protein | |
| D364_RS25905 | 1 | 22 | -5.810063 | LysR family transcriptional regulator | |
| D364_RS07000 | 1 | 14 | -3.724736 | SDR family oxidoreductase | |
| D364_RS07005 | -1 | 11 | -3.489930 | HD domain-containing protein | |
| D364_RS07010 | -2 | 11 | -3.346765 | DJ-1/PfpI family protein | |
| D364_RS07015 | 0 | 8 | 2.381899 | type VI secretion system contractile sheath | |
| D364_RS07025 | 1 | 9 | 1.774217 | type VI secretion system contractile sheath | |
| D364_RS07030 | 3 | 10 | 3.534396 | type VI secretion system baseplate subunit TssK | |
| D364_RS07035 | 3 | 12 | 3.832625 | type VI secretion system protein TssL, short | |
| D364_RS07040 | 3 | 13 | 3.111871 | OmpA family protein | |
| D364_RS07050 | 1 | 13 | 1.585920 | type VI secretion system effector Hcp | |
| D364_RS07055 | 0 | 14 | 1.922137 | type VI secretion system ATPase TssH | |
| D364_RS07060 | 2 | 18 | 1.032287 | type VI secretion system tip protein VgrG | |
| D364_RS07065 | 2 | 15 | 0.882985 | DUF4123 domain-containing protein | |
| D364_RS07070 | 2 | 15 | 1.124410 | T6SS immunity phospholipase A1-binding | |
| D364_RS07075 | 1 | 13 | 1.146387 | DUF2235 domain-containing protein | |
| D364_RS07080 | 2 | 12 | 1.717525 | PAAR domain-containing protein | |
| D364_RS07085 | 1 | 12 | 1.617795 | hypothetical protein | |
| D364_RS07090 | 1 | 11 | 1.357119 | type VI secretion protein VasK | |
| D364_RS07095 | -1 | 13 | 1.368392 | type VI secretion system protein TssA | |
| D364_RS07100 | -2 | 13 | 2.587614 | type VI secretion system baseplate subunit TssF | |
| D364_RS07105 | -1 | 16 | 4.078088 | type VI secretion system baseplate subunit TssG | |
| D364_RS07110 | -1 | 16 | 4.585260 | type VI secretion system lipoprotein TssJ | |
| D364_RS07120 | 1 | 17 | 5.024983 | hypothetical protein | |
| D364_RS07125 | 1 | 16 | 5.252732 | SDR family oxidoreductase | |
| D364_RS07130 | 1 | 17 | 5.275865 | TetR/AcrR family transcriptional regulator | |
| D364_RS07135 | 0 | 17 | 5.221170 | SDR family oxidoreductase | |
| D364_RS07140 | 1 | 19 | 4.670438 | AraC family transcriptional regulator | |
| D364_RS07145 | 1 | 19 | 3.655028 | DUF1471 domain-containing protein | |
| D364_RS07150 | 0 | 19 | 4.870157 | aromatic alcohol reductase | |
| D364_RS07155 | 2 | 21 | 5.553292 | LysR family transcriptional regulator | |
| D364_RS27385 | -1 | 20 | 6.084614 | hypothetical protein | |
| D364_RS07160 | 0 | 19 | 5.432610 | MBL fold metallo-hydrolase | |
| D364_RS07165 | 0 | 17 | 3.850024 | NmrA/HSCARG family protein | |
| D364_RS07170 | 0 | 16 | 2.625940 | TetR/AcrR family transcriptional regulator; | |
| D364_RS07175 | -1 | 16 | 1.698391 | NADP-dependent oxidoreductase | |
| D364_RS07180 | -1 | 16 | 1.648433 | aminotransferase class I/II-fold pyridoxal | |
| D364_RS07185 | -1 | 15 | 0.333895 | lipoprotein | |
| D364_RS07190 | 1 | 17 | -0.466888 | ATP-binding cassette domain-containing protein | |
| D364_RS07195 | 1 | 15 | 1.001201 | ABC transporter permease | |
| D364_RS07200 | 2 | 14 | 0.956252 | aspartate/tyrosine/aromatic aminotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06835 | HTHFIS | 31 | 0.007 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06855 | NUCEPIMERASE | 48 | 2e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06875 | TCRTETB | 87 | 1e-20 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06880 | HTHFIS | 344 | e-118 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06925 | HTHFIS | 307 | e-101 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS06980 | TCRTETB | 33 | 0.003 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07005 | DHBDHDRGNASE | 73 | 2e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07045 | OMPADOMAIN | 92 | 3e-22 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07055 | HTHFIS | 31 | 0.020 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07125 | DHBDHDRGNASE | 82 | 9e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07130 | HTHTETR | 44 | 7e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07135 | DHBDHDRGNASE | 103 | 6e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07170 | NUCEPIMERASE | 40 | 6e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07175 | HTHTETR | 59 | 3e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 25 | D364_RS07295 | D364_RS07370 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS07295 | 0 | 16 | 4.547171 | DedA family protein | |
| D364_RS07300 | 0 | 17 | 5.352323 | YdbH family protein | |
| D364_RS07305 | 0 | 18 | 6.576753 | YnbE family lipoprotein | |
| D364_RS07310 | 0 | 13 | 4.240874 | YdbL family protein | |
| D364_RS07315 | -1 | 11 | 3.951796 | transcriptional regulator FeaR | |
| D364_RS07320 | -1 | 11 | 3.650748 | aldehyde dehydrogenase family protein | |
| D364_RS07325 | -1 | 11 | 2.733990 | oxidoreductase | |
| D364_RS07330 | -1 | 11 | 1.937680 | zinc-dependent alcohol dehydrogenase family | |
| D364_RS07335 | -2 | 12 | 0.836330 | primary-amine oxidase | |
| D364_RS07340 | -2 | 11 | 2.214701 | phenylacetic acid degradation bifunctional | |
| D364_RS07345 | 0 | 14 | 2.144439 | 1,2-phenylacetyl-CoA epoxidase subunit A | |
| D364_RS07350 | 1 | 14 | 2.838781 | 1,2-phenylacetyl-CoA epoxidase subunit B | |
| D364_RS07355 | 1 | 11 | 3.479187 | phenylacetate-CoA oxygenase subunit PaaC | |
| D364_RS07360 | 0 | 13 | 3.166413 | phenylacetate-CoA oxygenase subunit PaaJ | |
| D364_RS07365 | 0 | 13 | 3.785302 | phenylacetate-CoA oxygenase/reductase subunit | |
| D364_RS07370 | 0 | 11 | 3.076818 | 2,3-dehydroadipyl-CoA hydratase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07305 | PF06291 | 27 | 0.002 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| 26 | D364_RS07445 | D364_RS07605 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS07445 | 2 | 13 | -0.877009 | MarR family transcriptional regulator | |
| D364_RS07450 | 2 | 13 | -0.134223 | LysR family transcriptional regulator | |
| D364_RS07455 | 0 | 11 | 2.701189 | aldo/keto reductase | |
| D364_RS07460 | -2 | 14 | 3.887310 | Glu/Leu/Phe/Val dehydrogenase | |
| D364_RS27390 | 0 | 16 | 4.889607 | hypothetical protein | |
| D364_RS07470 | -1 | 19 | 5.131050 | aspartate aminotransferase family protein | |
| D364_RS07475 | 0 | 19 | 4.673029 | arginine N-succinyltransferase | |
| D364_RS07480 | 1 | 19 | 5.337868 | succinylglutamate-semialdehyde dehydrogenase | |
| D364_RS07485 | 1 | 19 | 4.436218 | N-succinylarginine dihydrolase | |
| D364_RS07490 | 1 | 18 | 4.018417 | succinylglutamate desuccinylase | |
| D364_RS07495 | 1 | 15 | 2.651098 | amino acid permease | |
| D364_RS07500 | 0 | 12 | 2.216390 | MHS family MFS transporter | |
| D364_RS07505 | 0 | 13 | 1.489449 | YdcF family protein | |
| D364_RS27395 | 0 | 12 | -1.040100 | hypothetical protein | |
| D364_RS07515 | 1 | 12 | 0.769130 | aldehyde dehydrogenase | |
| D364_RS07520 | 2 | 16 | 0.503101 | type I glyceraldehyde-3-phosphate dehydrogenase | |
| D364_RS07525 | 4 | 16 | -0.456051 | YqaE/Pmp3 family membrane protein | |
| D364_RS07530 | 3 | 15 | -0.186807 | DUF1398 domain-containing protein | |
| D364_RS07535 | 1 | 16 | -3.371451 | sulfurtransferase-like selenium metabolism | |
| D364_RS07540 | 0 | 15 | -2.228864 | selenium metabolism membrane protein YedE/FdhT | |
| D364_RS07545 | -1 | 17 | -2.449756 | DUF1304 domain-containing protein | |
| D364_RS07550 | -2 | 12 | -1.759804 | hypothetical protein | |
| D364_RS07555 | -3 | 13 | 0.090889 | putative selenium delivery protein YdfZ | |
| D364_RS07560 | -2 | 12 | 0.790540 | IS481-like element ISKpn28 family transposase | |
| D364_RS07565 | -1 | 16 | 3.022913 | magnesium transporter CorA | |
| D364_RS07570 | -2 | 18 | 2.764786 | pyridoxal phosphate-dependent aminotransferase | |
| D364_RS07575 | -1 | 16 | 2.558260 | maltose/glucose-specific PTS transporter subunit | |
| D364_RS07580 | 0 | 16 | 2.816653 | Mal regulon transcriptional regulator MalI | |
| D364_RS07585 | 1 | 16 | 2.129379 | YdgA family protein | |
| D364_RS07590 | 0 | 14 | 1.521101 | mannose-6-phosphate isomerase | |
| D364_RS07595 | 1 | 12 | 1.033304 | fumarate hydratase | |
| D364_RS07600 | 1 | 13 | 1.144540 | class II fumarate hydratase | |
| D364_RS07605 | 2 | 16 | 0.859682 | DNA replication terminus site-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07500 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07535 | PF01206 | 93 | 4e-29 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07585 | FLGMOTORFLIG | 31 | 0.008 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| 27 | D364_RS07680 | D364_RS07985 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS07680 | -2 | 22 | -4.568628 | fumarate/nitrate reduction transcriptional | |
| D364_RS07685 | 0 | 26 | -3.833378 | methylated-DNA--[protein]-cysteine | |
| D364_RS07690 | -1 | 31 | -5.627421 | hypothetical protein | |
| D364_RS07695 | 1 | 31 | -5.135137 | pyocin activator PrtN family protein | |
| D364_RS07700 | 2 | 36 | -5.687206 | hypothetical protein | |
| D364_RS07705 | 3 | 40 | -6.775079 | hypothetical protein | |
| D364_RS07710 | 4 | 40 | -6.410746 | hypothetical protein | |
| D364_RS07715 | 4 | 42 | -7.198301 | ParB/RepB/Spo0J family partition protein | |
| D364_RS07720 | 4 | 45 | -7.655802 | hypothetical protein | |
| D364_RS07725 | 4 | 46 | -8.487188 | helix-turn-helix domain-containing protein | |
| D364_RS07735 | 3 | 40 | -7.830673 | Cro/Cl family transcriptional regulator | |
| D364_RS25940 | 3 | 34 | -6.422099 | hypothetical protein | |
| D364_RS07740 | 3 | 31 | -5.308293 | DUF4222 domain-containing protein | |
| D364_RS25945 | 2 | 33 | -6.125776 | Dam family site-specific | |
| D364_RS07750 | 1 | 37 | -8.060902 | RusA family crossover junction | |
| D364_RS07760 | 0 | 43 | -9.161859 | DUF968 domain-containing protein | |
| D364_RS07765 | 1 | 42 | -8.861529 | DUF1133 family protein | |
| D364_RS07770 | 1 | 48 | -10.287622 | MFS transporter | |
| D364_RS26915 | 3 | 60 | -14.787314 | phage holin family protein | |
| D364_RS25950 | 3 | 61 | -15.141388 | glycoside hydrolase family 19 protein | |
| D364_RS07775 | 3 | 57 | -14.554128 | hypothetical protein | |
| D364_RS07780 | 3 | 54 | -14.150434 | DUF4747 family protein | |
| D364_RS07785 | 1 | 57 | -13.385909 | hypothetical protein | |
| D364_RS07795 | 2 | 51 | -12.440965 | HNH endonuclease | |
| D364_RS07800 | 3 | 45 | -9.023528 | phage terminase small subunit P27 family | |
| D364_RS25960 | 1 | 37 | -6.214025 | phage portal protein | |
| D364_RS07820 | 1 | 34 | -6.104557 | HK97 family phage prohead protease | |
| D364_RS07830 | 0 | 26 | -5.185413 | phage major capsid protein | |
| D364_RS07835 | 0 | 26 | -4.474669 | head-tail connector protein | |
| D364_RS07840 | 1 | 30 | -4.976530 | phage head closure protein | |
| D364_RS07845 | 3 | 35 | -5.482562 | HK97 gp10 family phage protein | |
| D364_RS07850 | 2 | 35 | -4.840180 | DUF3168 domain-containing protein | |
| D364_RS07860 | 3 | 46 | -7.331114 | immunoglobulin domain-containing protein | |
| D364_RS07865 | 3 | 45 | -7.401314 | phage tail assembly chaperone | |
| D364_RS07870 | 2 | 46 | -7.624068 | DUF4035 domain-containing protein | |
| D364_RS07875 | 2 | 45 | -7.675644 | hypothetical protein | |
| D364_RS07880 | 1 | 40 | -6.650100 | phage tail tape measure protein | |
| D364_RS07885 | 1 | 38 | -6.013002 | hypothetical protein | |
| D364_RS07890 | 2 | 35 | -5.493522 | DUF1833 family protein | |
| D364_RS07895 | 3 | 38 | -7.062214 | nitrite transporter | |
| D364_RS07905 | 2 | 37 | -6.684086 | hypothetical protein | |
| D364_RS07910 | 0 | 40 | -7.809619 | hypothetical protein | |
| D364_RS07915 | 3 | 46 | -10.357375 | hypothetical protein | |
| D364_RS07920 | 0 | 33 | -7.854357 | hypothetical protein | |
| D364_RS07925 | -1 | 21 | -1.841353 | hypothetical protein | |
| D364_RS07930 | -1 | 17 | 0.743439 | site-specific integrase | |
| D364_RS07935 | -1 | 13 | 0.777601 | AbgT family transporter | |
| D364_RS07940 | -1 | 12 | 0.858524 | amidohydrolase | |
| D364_RS07945 | -1 | 14 | 3.675983 | M20 family metallo-hydrolase | |
| D364_RS07950 | -1 | 15 | 4.601296 | LysR family transcriptional regulator | |
| D364_RS07955 | -1 | 17 | 4.507307 | DNA endonuclease SmrA | |
| D364_RS07960 | 0 | 18 | 4.536083 | helix-turn-helix domain-containing protein | |
| D364_RS07965 | 1 | 18 | 6.086401 | 3-oxoacid CoA-transferase subunit A | |
| D364_RS07970 | 0 | 17 | 6.333959 | CoA transferase subunit B | |
| D364_RS07975 | 0 | 17 | 6.030791 | 3-oxoadipyl-CoA thiolase | |
| D364_RS07980 | 0 | 14 | 5.227547 | 3-carboxy-cis,cis-muconate cycloisomerase | |
| D364_RS07985 | -1 | 13 | 4.212324 | 3-oxoadipate enol-lactonase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07720 | IGASERPTASE | 30 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07840 | cloacin | 29 | 0.042 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07870 | adhesinb | 28 | 0.018 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| 28 | D364_RS08060 | D364_RS08160 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS08060 | 0 | 13 | 3.805560 | LysR family transcriptional regulator | |
| D364_RS08065 | 1 | 16 | 4.521967 | malonate decarboxylase subunit epsilon | |
| D364_RS08070 | 1 | 17 | 4.751598 | malonate decarboxylase holo-ACP synthase | |
| D364_RS08075 | -1 | 17 | 3.364305 | AEC family transporter | |
| D364_RS08080 | -2 | 14 | 2.785860 | biotin-independent malonate decarboxylase | |
| D364_RS08085 | -2 | 12 | 1.331193 | biotin-independent malonate decarboxylase | |
| D364_RS08090 | 0 | 10 | 0.848342 | malonate decarboxylase acyl carrier protein | |
| D364_RS08095 | 0 | 11 | 0.737512 | triphosphoribosyl-dephospho-CoA synthase | |
| D364_RS08100 | -1 | 10 | -0.865037 | malonate decarboxylase subunit alpha | |
| D364_RS08105 | 4 | 20 | -2.675544 | AI-2E family transporter | |
| D364_RS08110 | 3 | 20 | -0.447161 | multidrug efflux SMR transporter subunit KpnE | |
| D364_RS08115 | 1 | 16 | 1.310831 | multidrug efflux SMR transporter subunit KpnF | |
| D364_RS08120 | 1 | 17 | 1.720964 | hypothetical protein | |
| D364_RS08125 | -1 | 15 | 1.174262 | serine protease | |
| D364_RS08140 | 0 | 13 | 1.010163 | acid resistance repetitive basic protein Asr | |
| D364_RS08145 | 1 | 11 | 2.030203 | carboxypeptidase M32 | |
| D364_RS08150 | 1 | 11 | 2.228282 | MFS transporter | |
| D364_RS08155 | 2 | 11 | 2.208644 | LysR family transcriptional regulator | |
| D364_RS08160 | 2 | 11 | 1.942882 | ROK family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08125 | V8PROTEASE | 107 | 1e-29 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08140 | IGASERPTASE | 30 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08150 | TCRTETA | 54 | 5e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 29 | D364_RS08250 | D364_RS08830 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS08250 | 1 | 45 | -9.156031 | nuclear transport factor 2 family protein | |
| D364_RS25975 | 2 | 46 | -9.310162 | helix-turn-helix transcriptional regulator | |
| D364_RS08260 | 3 | 41 | -10.875203 | SOS response-associated peptidase | |
| D364_RS27400 | 2 | 53 | -16.851609 | hypothetical protein | |
| D364_RS26920 | 2 | 49 | -14.470128 | small membrane protein | |
| D364_RS08275 | 2 | 39 | -9.320946 | LuxR family transcriptional regulator | |
| D364_RS27405 | 1 | 23 | -3.272866 | hypothetical protein | |
| D364_RS27410 | 1 | 21 | -3.134932 | hypothetical protein | |
| D364_RS25980 | 1 | 24 | -4.525624 | hypothetical protein | |
| D364_RS08290 | 0 | 25 | -3.858608 | Hsp20 family protein | |
| D364_RS08295 | -1 | 20 | -1.769197 | 2-oxo-tetronate isomerase | |
| D364_RS08300 | -1 | 21 | -2.127997 | diguanylate phosphodiesterase | |
| D364_RS26925 | -1 | 24 | -2.095769 | small membrane protein | |
| D364_RS08305 | -2 | 17 | 0.362286 | helix-turn-helix transcriptional regulator | |
| D364_RS08310 | -2 | 15 | 2.336902 | GntP family transporter | |
| D364_RS08315 | 0 | 15 | 3.271824 | HPr family phosphocarrier protein | |
| D364_RS08320 | 0 | 15 | 3.924675 | aldolase | |
| D364_RS08325 | 0 | 16 | 4.213630 | four-carbon acid sugar kinase family protein | |
| D364_RS08330 | -1 | 14 | 3.572281 | NAD(P)-dependent oxidoreductase | |
| D364_RS08335 | -1 | 13 | 1.219111 | DeoR/GlpR family DNA-binding transcription | |
| D364_RS08340 | -2 | 11 | 2.419984 | class A broad-spectrum beta-lactamase SHV-1 | |
| D364_RS08345 | -2 | 12 | 3.275608 | hypothetical protein | |
| D364_RS08350 | -2 | 13 | 2.871519 | AAA family ATPase | |
| D364_RS08355 | -1 | 13 | 2.923841 | MFS transporter | |
| D364_RS08360 | 0 | 14 | 3.764033 | beta-galactosidase | |
| D364_RS08365 | 2 | 16 | 5.100653 | LacI family DNA-binding transcriptional | |
| D364_RS08370 | 1 | 16 | 4.450355 | GNAT family N-acetyltransferase | |
| D364_RS08375 | -1 | 15 | 2.155407 | DUF4177 domain-containing protein | |
| D364_RS08380 | -1 | 13 | 3.542862 | transcriptional regulator FtrA | |
| D364_RS08385 | 0 | 13 | 3.956261 | Rhodanese-related sulfurtransferase | |
| D364_RS08390 | 0 | 14 | 3.527403 | cobalamin-independent methionine synthase II | |
| D364_RS08395 | 1 | 15 | 3.618941 | urea ABC transporter substrate-binding protein | |
| D364_RS08405 | 3 | 17 | 4.452213 | urea ABC transporter permease subunit UrtB | |
| D364_RS08410 | 4 | 17 | 3.657411 | urea ABC transporter permease subunit UrtC | |
| D364_RS08415 | 4 | 17 | 2.776284 | urea ABC transporter ATP-binding protein UrtD | |
| D364_RS08420 | 3 | 16 | 1.654025 | urea ABC transporter ATP-binding subunit UrtE | |
| D364_RS08425 | 1 | 13 | 0.286349 | helix-turn-helix domain-containing protein | |
| D364_RS08430 | 1 | 14 | -1.181486 | efflux MFS transporter YdeE | |
| D364_RS08435 | 1 | 15 | -3.260339 | O-acetylserine/cysteine exporter | |
| D364_RS08440 | 0 | 14 | -3.018075 | multiple antibiotic resistance protein MarB | |
| D364_RS08445 | -2 | 12 | -1.724582 | MDR efflux pump AcrAB transcriptional activator | |
| D364_RS08450 | 1 | 18 | -3.978604 | multiple antibiotic resistance transcriptional | |
| D364_RS27415 | 1 | 24 | -5.063920 | hypothetical protein | |
| D364_RS08460 | 0 | 19 | -3.540981 | MarC family NAAT transporter | |
| D364_RS08465 | -1 | 17 | -2.228593 | sugar transporter | |
| D364_RS08470 | -1 | 18 | -1.113875 | PhzF family phenazine biosynthesis protein | |
| D364_RS08475 | -1 | 17 | -0.788934 | MFS transporter | |
| D364_RS08480 | -2 | 14 | 1.904373 | phosphoglycerate dehydrogenase | |
| D364_RS08485 | 0 | 15 | 4.279343 | dihydrodipicolinate synthase family protein | |
| D364_RS08490 | 2 | 15 | 4.506651 | iron-containing alcohol dehydrogenase | |
| D364_RS08495 | 1 | 17 | 4.732858 | four-carbon acid sugar kinase family protein | |
| D364_RS08500 | 0 | 17 | 4.287870 | D-threonate 4-phosphate dehydrogenase | |
| D364_RS08505 | 1 | 18 | 4.136751 | DeoR/GlpR family DNA-binding transcription | |
| D364_RS08510 | 1 | 18 | 4.385227 | L-lactate dehydrogenase | |
| D364_RS08515 | -1 | 13 | 2.642438 | GNAT family N-acetyltransferase | |
| D364_RS08520 | -1 | 12 | 2.415989 | LysR family transcriptional regulator | |
| D364_RS08525 | -1 | 11 | 1.466396 | succinate-semialdehyde dehydrogenase | |
| D364_RS08530 | -2 | 11 | -0.011779 | glutaminase B | |
| D364_RS08535 | -3 | 13 | -0.629954 | DUF4186 domain-containing protein | |
| D364_RS08540 | -3 | 15 | -2.347529 | sensor domain-containing diguanylate cyclase | |
| D364_RS08545 | -1 | 23 | -4.717534 | GNAT family N-acetyltransferase | |
| D364_RS08550 | 0 | 26 | -5.317167 | tagaturonate reductase | |
| D364_RS08555 | 0 | 36 | -7.847192 | GNAT family N-acetyltransferase | |
| D364_RS08560 | -1 | 30 | -5.164692 | hypothetical protein | |
| D364_RS08565 | -1 | 29 | -5.589426 | tautomerase family protein | |
| D364_RS26935 | -2 | 19 | -1.518755 | carboxymuconolactone decarboxylase family | |
| D364_RS08575 | -2 | 15 | 1.225697 | trans-aconitate 2-methyltransferase | |
| D364_RS08580 | 2 | 14 | 1.888908 | hypothetical protein | |
| D364_RS08585 | 2 | 14 | 2.452314 | MFS transporter | |
| D364_RS08590 | 2 | 13 | 3.151976 | prolyl endopeptidase | |
| D364_RS08595 | 2 | 12 | 3.663073 | YbfB/YjiJ family MFS transporter | |
| D364_RS08600 | 3 | 13 | 4.014713 | LysR family transcriptional regulator | |
| D364_RS08605 | 1 | 13 | 3.353863 | nitronate monooxygenase | |
| D364_RS08610 | 0 | 12 | 3.607300 | ABC transporter permease | |
| D364_RS08615 | -1 | 12 | 2.965341 | ATP-binding cassette domain-containing protein | |
| D364_RS08620 | -1 | 13 | 1.794871 | MetQ/NlpA family ABC transporter | |
| D364_RS08625 | -1 | 14 | 2.244711 | isopenicillin N synthase family oxygenase | |
| D364_RS08630 | -1 | 14 | 3.206959 | VF530 family protein | |
| D364_RS08635 | -1 | 15 | 4.792466 | cupin | |
| D364_RS08640 | 0 | 17 | 5.824497 | VOC family protein | |
| D364_RS08645 | 0 | 17 | 5.799490 | AraC family transcriptional regulator | |
| D364_RS08650 | 1 | 18 | 6.166239 | MFS transporter | |
| D364_RS08660 | 1 | 15 | 5.377221 | molybdenum cofactor-independent xanthine | |
| D364_RS08665 | 2 | 17 | 5.255761 | molybdenum cofactor-independent xanthine | |
| D364_RS08675 | 1 | 17 | 4.447170 | LysR family hpxDE operon transcriptional | |
| D364_RS08680 | -1 | 15 | 3.671486 | FAD-dependent urate hydroxylase HpxO | |
| D364_RS08685 | -1 | 17 | 3.038358 | purine permease | |
| D364_RS08690 | -2 | 15 | 3.419050 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline | |
| D364_RS08695 | 0 | 13 | 2.922977 | hydroxyisourate hydrolase | |
| D364_RS08700 | -1 | 13 | 2.234063 | type II toxin-antitoxin system antitoxin HipB | |
| D364_RS08705 | -1 | 12 | 1.782778 | type II toxin-antitoxin system HipA family | |
| D364_RS08710 | -1 | 13 | 1.423550 | glycoside hydrolase family 10 protein | |
| D364_RS08715 | -1 | 15 | 0.502365 | type 1 fimbrial protein | |
| D364_RS08720 | -1 | 15 | -0.640915 | fimbrial biogenesis outer membrane usher | |
| D364_RS08725 | -1 | 20 | -4.439332 | molecular chaperone | |
| D364_RS08730 | -1 | 18 | -4.865376 | type 1 fimbrial protein | |
| D364_RS08735 | -2 | 16 | -3.187718 | hypothetical protein | |
| D364_RS08740 | -2 | 17 | -3.444409 | type I methionyl aminopeptidase | |
| D364_RS08745 | -3 | 19 | -4.122492 | ParD-like family protein | |
| D364_RS08750 | -2 | 19 | -4.942463 | hypothetical protein | |
| D364_RS08755 | -3 | 15 | -4.487291 | EAL domain-containing protein | |
| D364_RS08760 | -2 | 14 | -3.326477 | siderophore esterase IroE | |
| D364_RS27420 | -2 | 12 | -3.838299 | hypothetical protein | |
| D364_RS08770 | -2 | 12 | -3.641058 | hypothetical protein | |
| D364_RS08780 | -2 | 12 | -2.415572 | PTS sugar transporter subunit IIA | |
| D364_RS08785 | -2 | 12 | -0.422284 | sugar porter family MFS transporter | |
| D364_RS08795 | -1 | 16 | 1.190699 | 6-phospho-alpha-glucosidase | |
| D364_RS08800 | 0 | 15 | 0.268074 | PTS transporter subunit EIIC | |
| D364_RS08805 | 2 | 16 | 1.873885 | GntR family transcriptional regulator | |
| D364_RS08810 | 1 | 15 | 1.876537 | sulfite exporter TauE/SafE family protein | |
| D364_RS08815 | -1 | 14 | 1.719960 | LysR family transcriptional regulator | |
| D364_RS08820 | 0 | 13 | 0.657480 | NAD(P)-dependent oxidoreductase | |
| D364_RS08825 | 1 | 13 | 0.708919 | helix-turn-helix domain-containing protein | |
| D364_RS08830 | 2 | 13 | 1.692326 | glycerate kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08345 | BLACTAMASEA | 438 | e-159 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08360 | TCRTETA | 41 | 5e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08415 | PF05211 | 28 | 0.039 | Neuraminyllactose-binding hemagglutinin | |
>PF05211#Neuraminyllactose-binding hemagglutinin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08425 | TYPE3OMBPROT | 28 | 0.021 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08430 | TCRTETA | 46 | 2e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08465 | TCRTETB | 59 | 2e-11 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08475 | TCRTETB | 60 | 5e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08515 | SACTRNSFRASE | 36 | 3e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08530 | BLACTAMASEA | 35 | 3e-04 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08545 | SACTRNSFRASE | 32 | 7e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08555 | SACTRNSFRASE | 31 | 6e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08595 | TCRTETA | 41 | 6e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08605 | TCRTETA | 31 | 0.006 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08640 | MICOLLPTASE | 26 | 0.025 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08660 | TCRTETB | 44 | 1e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08665 | PF06057 | 28 | 0.033 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08720 | PF00577 | 679 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08730 | FIMBRIALPAPE | 32 | 9e-04 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08735 | FIMBRIALPAPE | 27 | 0.015 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08785 | TCRTETA | 40 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08825 | DNABINDNGFIS | 29 | 0.012 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. | |||||
| 30 | D364_RS08895 | D364_RS09010 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS08895 | -1 | 29 | -4.547487 | deoxyribose-phosphate aldolase | |
| D364_RS08900 | -2 | 32 | -5.421400 | pentose kinase | |
| D364_RS08905 | -1 | 30 | -6.281648 | DeoR/GlpR family DNA-binding transcription | |
| D364_RS08910 | -1 | 32 | -6.335930 | AraC family transcriptional regulator | |
| D364_RS08915 | -1 | 29 | -6.734178 | hypothetical protein | |
| D364_RS08920 | -1 | 31 | -6.659032 | alpha/beta hydrolase | |
| D364_RS08925 | 1 | 30 | -5.648908 | DUF2255 family protein | |
| D364_RS08930 | 0 | 31 | -5.361254 | helix-turn-helix domain-containing protein | |
| D364_RS08935 | 2 | 34 | -5.967120 | type I glyceraldehyde-3-phosphate dehydrogenase | |
| D364_RS27425 | 3 | 30 | -4.066723 | hypothetical protein | |
| D364_RS08950 | 2 | 30 | -3.309473 | hypothetical protein | |
| D364_RS08955 | 1 | 31 | -3.138239 | aldo/keto reductase | |
| D364_RS08960 | 0 | 32 | -4.066791 | SMP-30/gluconolactonase/LRE family protein | |
| D364_RS08965 | -1 | 30 | -3.663124 | aldo/keto reductase | |
| D364_RS08970 | -2 | 26 | -3.343149 | aldo/keto reductase | |
| D364_RS08975 | -1 | 27 | -3.642980 | LysR family transcriptional regulator | |
| D364_RS08980 | -2 | 23 | -4.033406 | GrpB family protein | |
| D364_RS08985 | -2 | 23 | -4.392931 | sigma-54 dependent transcriptional regulator | |
| D364_RS08990 | -2 | 21 | -3.329958 | two-component system sensor histidine kinase | |
| D364_RS08995 | -2 | 21 | -3.158961 | phosphoglycerate transport regulator PgtC | |
| D364_RS09000 | -2 | 20 | -3.536735 | phosphoglycerate transporter PgtP | |
| D364_RS09005 | 0 | 20 | -3.470355 | peptidoglycan-binding protein LysM | |
| D364_RS09010 | 2 | 23 | -3.590728 | alpha/beta fold hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08990 | HTHFIS | 246 | 3e-79 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09000 | FLGMOTORFLIM | 31 | 0.010 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09005 | TCRTETA | 31 | 0.009 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09010 | INTIMIN | 32 | 5e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 31 | D364_RS09070 | D364_RS09135 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS09070 | -2 | 39 | -5.844030 | M20 family metallopeptidase | |
| D364_RS09075 | 1 | 45 | -7.691024 | cell envelope integrity protein TolA | |
| D364_RS09080 | 1 | 44 | -7.992067 | N-acyl homoserine lactonase family protein | |
| D364_RS09085 | 1 | 44 | -8.101609 | LysR family transcriptional regulator | |
| D364_RS09090 | 2 | 44 | -9.086282 | LysR family transcriptional regulator | |
| D364_RS09095 | 1 | 40 | -9.418031 | MFS transporter | |
| D364_RS09100 | 1 | 32 | -8.333291 | LysE family translocator | |
| D364_RS09105 | 1 | 34 | -9.827843 | PTS fructose transporter subunit IIC | |
| D364_RS09110 | 2 | 37 | -11.292585 | PTS fructose transporter subunit IIB | |
| D364_RS09115 | 1 | 34 | -9.930201 | PTS sugar transporter subunit IIA | |
| D364_RS09120 | 1 | 32 | -9.211202 | ribulose-phosphate 3-epimerase | |
| D364_RS09125 | 1 | 25 | -5.874719 | PTS ascorbate transporter subunit IIC | |
| D364_RS09130 | 1 | 24 | -5.128118 | PTS sugar transporter subunit IIB | |
| D364_RS09135 | 0 | 22 | -3.645975 | PTS sugar transporter subunit IIA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09080 | ALARACEMASE | 29 | 0.014 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09095 | TCRTETA | 31 | 0.013 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 32 | D364_RS09180 | D364_RS09240 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS09180 | -1 | 15 | 4.664959 | FAD-NAD(P)-binding protein | |
| D364_RS09185 | 0 | 16 | 4.937019 | NADH:flavin oxidoreductase/NADH oxidase | |
| D364_RS09190 | 1 | 17 | 4.235673 | hypothetical protein | |
| D364_RS09195 | 2 | 17 | 4.711680 | LysR family transcriptional regulator | |
| D364_RS09200 | 3 | 17 | 4.818828 | nitronate monooxygenase | |
| D364_RS09205 | 2 | 19 | 4.317401 | allantoate amidohydrolase | |
| D364_RS09210 | 2 | 19 | 2.778749 | alanine--glyoxylate aminotransferase family | |
| D364_RS09215 | 1 | 18 | 4.456763 | amino acid ABC transporter ATP-binding protein | |
| D364_RS09220 | 2 | 19 | 5.012991 | amino acid ABC transporter permease | |
| D364_RS09225 | 2 | 19 | 6.313155 | amino acid ABC transporter permease | |
| D364_RS09230 | 3 | 20 | 6.789815 | transporter substrate-binding domain-containing | |
| D364_RS09235 | 3 | 17 | 6.066909 | MurR/RpiR family transcriptional regulator HpxU | |
| D364_RS09240 | 1 | 13 | 3.537046 | oxamate amidohydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09215 | PF05272 | 29 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09235 | BCTERIALGSPD | 29 | 0.020 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| 33 | D364_RS09285 | D364_RS09330 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS09285 | -1 | 24 | -3.372992 | beta-ketoacyl-ACP synthase II | |
| D364_RS09290 | 0 | 40 | -6.785914 | ASCH domain-containing protein | |
| D364_RS09305 | 3 | 55 | -11.643276 | hypothetical protein | |
| D364_RS26010 | 2 | 57 | -11.376416 | helix-turn-helix transcriptional regulator | |
| D364_RS09315 | 1 | 52 | -10.293387 | GMP synthase | |
| D364_RS09320 | 1 | 47 | -8.955248 | SDR family oxidoreductase | |
| D364_RS09325 | 0 | 44 | -7.365430 | cysteine hydrolase | |
| D364_RS09330 | 0 | 28 | -3.962916 | histidine phosphatase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09325 | DHBDHDRGNASE | 64 | 5e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09330 | ISCHRISMTASE | 51 | 3e-10 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 34 | D364_RS09385 | D364_RS09495 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS09385 | 0 | 14 | 3.415609 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS09390 | 0 | 15 | 4.394453 | DUF4056 domain-containing protein | |
| D364_RS09395 | 0 | 13 | 4.718188 | thiaminase II | |
| D364_RS27435 | -2 | 13 | 3.216892 | ABC transporter ATP-binding protein | |
| D364_RS09410 | -1 | 13 | 3.294658 | ABC transporter permease | |
| D364_RS09415 | 0 | 13 | 3.700318 | ABC transporter substrate-binding protein | |
| D364_RS09420 | 0 | 13 | 3.521963 | diaminobutyrate--2-oxoglutarate transaminase | |
| D364_RS09425 | -1 | 13 | 3.938149 | aspartate aminotransferase family protein | |
| D364_RS09430 | 1 | 13 | 4.284418 | LysR family transcriptional regulator | |
| D364_RS09435 | 1 | 16 | 4.901186 | cytochrome c biogenesis protein/redoxin | |
| D364_RS09440 | 3 | 16 | 4.422015 | HAMP domain-containing protein | |
| D364_RS09445 | 2 | 17 | 3.747060 | response regulator | |
| D364_RS09450 | 2 | 16 | 2.710493 | alpha/beta hydrolase | |
| D364_RS09455 | 2 | 15 | 1.485724 | dipeptidase | |
| D364_RS09460 | 2 | 13 | 1.327421 | pyrroloquinoline quinone precursor peptide PqqA | |
| D364_RS09465 | -1 | 15 | 1.060207 | pyrroloquinoline quinone biosynthesis protein | |
| D364_RS09470 | 2 | 14 | 5.159942 | pyrroloquinoline-quinone synthase PqqC | |
| D364_RS09480 | 0 | 13 | 4.729726 | pyrroloquinoline quinone biosynthesis peptide | |
| D364_RS09485 | 0 | 13 | 4.807166 | pyrroloquinoline quinone biosynthesis protein | |
| D364_RS09490 | 1 | 12 | 4.646194 | pyrroloquinoline quinone biosynthesis protein | |
| D364_RS09495 | 1 | 13 | 4.487940 | glutamine amidotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09455 | HTHFIS | 96 | 5e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 35 | D364_RS09570 | D364_RS09595 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS09570 | 2 | 20 | 0.987061 | ABC transporter substrate-binding protein | |
| D364_RS09575 | 2 | 20 | -2.345307 | DUF2236 domain-containing protein | |
| D364_RS09580 | 2 | 19 | -2.691705 | OsmC family protein | |
| D364_RS27440 | 2 | 17 | -1.070440 | hypothetical protein | |
| D364_RS09590 | 2 | 17 | -0.800995 | YdeI family stress tolerance OB fold protein | |
| D364_RS09595 | 2 | 18 | -1.250800 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09590 | PF04619 | 27 | 0.014 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
| 36 | D364_RS09675 | D364_RS09735 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS09675 | 0 | 12 | 3.076352 | ATP-binding cassette domain-containing protein | |
| D364_RS09680 | 0 | 11 | 3.153346 | helix-turn-helix domain-containing GNAT family | |
| D364_RS09685 | -1 | 15 | 3.817664 | inorganic diphosphatase | |
| D364_RS09695 | -2 | 14 | 4.480464 | alcohol dehydrogenase AdhP | |
| D364_RS09700 | -2 | 14 | 5.263959 | TIGR04028 family ABC transporter | |
| D364_RS09705 | -1 | 13 | 5.382751 | ABC transporter permease | |
| D364_RS09710 | -2 | 14 | 5.408173 | ABC transporter permease | |
| D364_RS09715 | -1 | 14 | 4.054339 | ABC transporter ATP-binding protein | |
| D364_RS09720 | -1 | 12 | 2.872139 | putative FMN-dependent luciferase-like | |
| D364_RS09725 | 1 | 13 | 0.437836 | alkylhydroperoxidase domain protein | |
| D364_RS09730 | 1 | 15 | -2.916313 | MFS transporter AraJ | |
| D364_RS09735 | 0 | 16 | -3.642441 | VOC family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09680 | SACTRNSFRASE | 33 | 6e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09730 | TCRTETA | 56 | 1e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 37 | D364_RS09795 | D364_RS09940 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS09795 | 2 | 14 | 2.877880 | muconolactone Delta-isomerase | |
| D364_RS09800 | 2 | 14 | 1.924846 | muconate cycloisomerase family protein | |
| D364_RS09805 | -1 | 11 | 1.918843 | helix-turn-helix domain-containing protein | |
| D364_RS09810 | -1 | 12 | 1.561855 | efflux MFS transporter KmrA | |
| D364_RS09815 | -2 | 11 | 1.283671 | TetR family transcriptional regulator | |
| D364_RS09820 | -2 | 14 | 0.439498 | NarK family nitrate/nitrite MFS transporter | |
| D364_RS09825 | -2 | 12 | 0.282171 | nitrate reductase subunit alpha | |
| D364_RS09830 | -2 | 13 | 2.089724 | nitrate reductase subunit beta | |
| D364_RS09835 | 0 | 14 | 3.158139 | nitrate reductase molybdenum cofactor assembly | |
| D364_RS09840 | 0 | 15 | 4.234333 | respiratory nitrate reductase subunit gamma | |
| D364_RS09845 | 0 | 14 | 4.530496 | N-hydroxyarylamine O-acetyltransferase | |
| D364_RS09850 | -1 | 14 | 3.491099 | iron ABC transporter permease | |
| D364_RS09855 | -1 | 13 | 3.499455 | ABC transporter substrate-binding protein | |
| D364_RS09860 | -1 | 15 | 1.738261 | ABC transporter ATP-binding protein | |
| D364_RS09865 | -2 | 14 | 1.081122 | flavin reductase family protein | |
| D364_RS09870 | -1 | 15 | -0.753954 | helix-turn-helix domain-containing protein | |
| D364_RS09880 | -1 | 13 | -1.327972 | family 78 glycoside hydrolase catalytic domain | |
| D364_RS09885 | 0 | 15 | -1.650470 | MFS transporter | |
| D364_RS09890 | 2 | 14 | -0.687690 | carbohydrate porin | |
| D364_RS26050 | 0 | 19 | -0.866173 | hypothetical protein | |
| D364_RS09895 | -1 | 15 | 2.556336 | helix-turn-helix domain-containing protein | |
| D364_RS09900 | 1 | 18 | 3.661755 | tautomerase PptA | |
| D364_RS09905 | 0 | 17 | 3.586702 | glutathione S-transferase family protein | |
| D364_RS09910 | 0 | 14 | 2.132186 | transporter substrate-binding domain-containing | |
| D364_RS09915 | -1 | 16 | 2.193772 | amino acid ABC transporter ATP-binding protein | |
| D364_RS09920 | 0 | 15 | 3.275608 | amino acid ABC transporter permease | |
| D364_RS09925 | 0 | 15 | 3.199181 | GNAT family N-acetyltransferase | |
| D364_RS09930 | 1 | 15 | 3.553024 | ABC transporter substrate-binding protein | |
| D364_RS09935 | -1 | 13 | 3.039287 | LLM class flavin-dependent oxidoreductase | |
| D364_RS09940 | -2 | 14 | 3.638841 | M20 peptidase aminoacylase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09815 | TCRTETB | 318 | e-106 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09820 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09865 | PF05272 | 30 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09890 | GPOSANCHOR | 37 | 2e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 38 | D364_RS10465 | D364_RS10905 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS10465 | 0 | 24 | -3.344303 | riboflavin synthase | |
| D364_RS10470 | 1 | 22 | -1.417521 | MdtK family multidrug efflux MATE transporter | |
| D364_RS10475 | 1 | 27 | -1.029894 | acid resistance repetitive basic protein Asr | |
| D364_RS10480 | 1 | 23 | 0.599859 | TIGR00730 family Rossman fold protein | |
| D364_RS10500 | 0 | 23 | 1.009085 | ***hypothetical protein | |
| D364_RS26060 | 1 | 21 | 2.896434 | hypothetical protein | |
| D364_RS10510 | 1 | 19 | 4.261784 | SDR family oxidoreductase | |
| D364_RS10515 | 1 | 19 | 2.517438 | AraC family transcriptional regulator | |
| D364_RS10520 | 0 | 21 | 0.138907 | LysR family transcriptional regulator | |
| D364_RS10525 | 0 | 23 | -2.061968 | hypothetical protein | |
| D364_RS10530 | -1 | 21 | -3.405510 | MBL fold metallo-hydrolase | |
| D364_RS27450 | 2 | 18 | -4.208264 | hypothetical protein | |
| D364_RS10540 | 1 | 15 | -3.299567 | helix-turn-helix domain-containing protein | |
| D364_RS10545 | 0 | 14 | -1.707173 | hypothetical protein | |
| D364_RS10550 | 0 | 13 | 0.158464 | DUF1471 domain-containing protein | |
| D364_RS10560 | -1 | 14 | 0.468780 | carbonic anhydrase | |
| D364_RS10565 | -1 | 15 | 1.188001 | LysE family transporter | |
| D364_RS10570 | -1 | 14 | 1.470134 | DeoR/GlpR family DNA-binding transcription | |
| D364_RS10575 | 0 | 16 | 2.748371 | glyoxalase/bleomycin resistance/extradiol | |
| D364_RS10580 | -1 | 16 | 3.020317 | CatA-like O-acetyltransferase | |
| D364_RS10585 | -1 | 15 | 2.732661 | ABC transporter substrate-binding protein | |
| D364_RS10590 | 2 | 16 | 3.220573 | ABC transporter permease | |
| D364_RS10595 | 2 | 16 | 3.119435 | ABC transporter permease | |
| D364_RS10600 | 0 | 14 | 2.859126 | ABC transporter ATP-binding protein | |
| D364_RS10605 | 0 | 15 | 1.399159 | ATP-binding cassette domain-containing protein | |
| D364_RS10610 | 1 | 19 | -1.070303 | membrane protein | |
| D364_RS10615 | 1 | 23 | -2.350126 | DinB family protein | |
| D364_RS10620 | 3 | 28 | -3.339282 | hypothetical protein | |
| D364_RS10625 | 2 | 23 | -2.630864 | MFS transporter | |
| D364_RS10630 | 0 | 20 | -1.587192 | LysR family transcriptional regulator | |
| D364_RS10635 | 0 | 18 | -1.217856 | zinc-dependent alcohol dehydrogenase family | |
| D364_RS10640 | 1 | 15 | 0.215961 | LysR family transcriptional regulator | |
| D364_RS26065 | 0 | 14 | 1.742294 | GFA family protein | |
| D364_RS10645 | 1 | 15 | 4.309868 | isopenicillin N synthase family oxygenase | |
| D364_RS10650 | 1 | 15 | 4.755770 | amidohydrolase family protein | |
| D364_RS10655 | 1 | 16 | 4.017892 | ABC transporter substrate-binding protein | |
| D364_RS10660 | 0 | 16 | 3.831859 | LysR family transcriptional regulator | |
| D364_RS10670 | 0 | 16 | 4.535855 | PDR/VanB family oxidoreductase | |
| D364_RS10675 | 0 | 20 | 4.856646 | hypothetical protein | |
| D364_RS10680 | 0 | 18 | 3.769516 | RidA family protein | |
| D364_RS10685 | 0 | 18 | 4.031327 | creatininase family protein | |
| D364_RS10690 | -2 | 16 | 1.230161 | ABC transporter substrate-binding protein | |
| D364_RS10695 | -2 | 16 | 1.097109 | ABC transporter ATP-binding protein | |
| D364_RS10700 | -1 | 16 | 1.053120 | ABC transporter permease | |
| D364_RS10705 | -2 | 14 | 1.508179 | FAD-binding oxidoreductase | |
| D364_RS26070 | 0 | 15 | 0.452741 | hypothetical protein | |
| D364_RS10715 | 0 | 16 | 2.570023 | DUF535 family protein | |
| D364_RS26985 | 0 | 22 | 6.807023 | hypothetical protein | |
| D364_RS10725 | -1 | 21 | 6.616847 | LysR family transcriptional regulator | |
| D364_RS10730 | 0 | 25 | 6.981052 | CoA transferase subunit A | |
| D364_RS10735 | 0 | 24 | 6.557445 | CoA transferase subunit B | |
| D364_RS10740 | 1 | 24 | 6.229698 | acetyl-CoA C-acetyltransferase | |
| D364_RS10745 | 1 | 23 | 5.171644 | 3-hydroxyacyl-CoA dehydrogenase family protein | |
| D364_RS10750 | -1 | 22 | 3.989275 | GntP family permease | |
| D364_RS10755 | -2 | 17 | 1.642346 | 3-hydroxybutyrate dehydrogenase | |
| D364_RS10760 | -1 | 18 | -3.376349 | LysR family transcriptional regulator | |
| D364_RS10765 | -1 | 24 | -5.083591 | acetolactate decarboxylase | |
| D364_RS10770 | 0 | 30 | -7.013727 | acetolactate synthase AlsS | |
| D364_RS10775 | 2 | 45 | -10.681625 | (S)-acetoin forming diacetyl reductase | |
| D364_RS10780 | 3 | 52 | -12.907890 | GNAT family N-acetyltransferase | |
| D364_RS10785 | 3 | 53 | -13.762344 | multidrug efflux RND transporter permease | |
| D364_RS10790 | 4 | 60 | -16.081193 | ABC transporter six-transmembrane | |
| D364_RS10795 | 2 | 50 | -12.423935 | transporter | |
| D364_RS10800 | 1 | 43 | -9.809536 | response regulator | |
| D364_RS10805 | 1 | 36 | -7.853175 | HAMP domain-containing histidine kinase CrrB | |
| D364_RS10810 | 1 | 16 | -1.739851 | LD-carboxypeptidase | |
| D364_RS10815 | 1 | 12 | 2.203935 | c-type cytochrome biogenesis protein CcmI | |
| D364_RS10820 | 3 | 21 | 6.023677 | cytochrome c-type biogenesis protein CcmH | |
| D364_RS10825 | 3 | 22 | 5.477968 | DsbE family thiol:disulfide interchange protein | |
| D364_RS10830 | 3 | 23 | 6.349466 | heme lyase CcmF/NrfE family subunit | |
| D364_RS10835 | 4 | 23 | 7.100504 | cytochrome c maturation protein CcmE | |
| D364_RS10840 | 1 | 21 | 6.765156 | heme exporter protein CcmD | |
| D364_RS10845 | 0 | 22 | 5.452556 | heme ABC transporter permease | |
| D364_RS10850 | 0 | 21 | 4.852804 | heme exporter protein CcmB | |
| D364_RS10855 | 0 | 18 | 4.401873 | cytochrome c biogenesis heme-transporting ATPase | |
| D364_RS10860 | 0 | 17 | 3.782861 | cytochrome c | |
| D364_RS10865 | -2 | 18 | 2.988192 | GMC family oxidoreductase | |
| D364_RS10870 | 0 | 15 | 1.406230 | gluconate 2-dehydrogenase subunit 3 family | |
| D364_RS10875 | -2 | 14 | 2.409260 | VOC family protein | |
| D364_RS10880 | -2 | 16 | 2.846125 | ABC transporter ATP-binding protein | |
| D364_RS10885 | -1 | 17 | 2.948409 | iron ABC transporter permease | |
| D364_RS10890 | -1 | 16 | 3.339218 | ABC transporter substrate-binding protein | |
| D364_RS10895 | -1 | 15 | 3.819995 | malate/lactate/ureidoglycolate dehydrogenase | |
| D364_RS10905 | 0 | 16 | 4.985458 | formate dehydrogenase subunit alpha |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10510 | DHBDHDRGNASE | 95 | 2e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10570 | ARGREPRESSOR | 30 | 0.004 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10610 | cloacin | 31 | 0.002 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10625 | TCRTETB | 108 | 1e-27 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10650 | FERRIBNDNGPP | 32 | 0.004 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10705 | BINARYTOXINA | 31 | 0.010 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10750 | ABC2TRNSPORT | 30 | 0.027 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10755 | DHBDHDRGNASE | 115 | 4e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10775 | DHBDHDRGNASE | 124 | 1e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10785 | ACRIFLAVINRP | 1060 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10800 | HTHFIS | 78 | 7e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10885 | PF05272 | 29 | 0.043 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 39 | D364_RS10950 | D364_RS11130 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS10950 | -2 | 19 | 5.229253 | basic amino acid ABC transporter | |
| D364_RS10955 | -2 | 17 | 5.310231 | MurR/RpiR family transcriptional regulator | |
| D364_RS10965 | 0 | 17 | 4.583084 | ABC transporter substrate-binding protein | |
| D364_RS10970 | 0 | 17 | 4.862368 | iron ABC transporter permease | |
| D364_RS10975 | 1 | 17 | 5.374496 | iron ABC transporter permease | |
| D364_RS10980 | 0 | 16 | 4.507036 | ABC transporter ATP-binding protein | |
| D364_RS10985 | -1 | 16 | 3.545341 | TonB-dependent siderophore receptor | |
| D364_RS10990 | -1 | 17 | 4.277301 | ABC transporter ATP-binding protein | |
| D364_RS10995 | 1 | 18 | 6.169960 | ABC transporter permease subunit | |
| D364_RS11000 | 1 | 17 | 6.268132 | ABC transporter substrate-binding protein | |
| D364_RS11005 | 0 | 16 | 5.741288 | ABC transporter substrate-binding protein | |
| D364_RS11010 | -1 | 17 | 6.927058 | acyl-CoA/acyl-ACP dehydrogenase | |
| D364_RS11015 | 1 | 18 | 6.940477 | LLM class flavin-dependent oxidoreductase | |
| D364_RS11020 | 2 | 17 | 7.325061 | LysR family transcriptional regulator | |
| D364_RS11025 | 4 | 18 | 7.036548 | cysteine dioxygenase | |
| D364_RS11030 | 2 | 17 | 6.616204 | rhodanese homology domain-containing protein | |
| D364_RS11035 | 2 | 18 | 6.974836 | polyphenol oxidase family protein | |
| D364_RS11040 | 2 | 19 | 5.694437 | 3-(3-hydroxy-phenyl)propionate transporter MhpT | |
| D364_RS11045 | 1 | 19 | 6.000841 | 4-hydroxy-2-oxovalerate aldolase | |
| D364_RS11050 | 0 | 19 | 5.003683 | acetaldehyde dehydrogenase (acetylating) | |
| D364_RS11055 | -1 | 18 | 5.039925 | 2-keto-4-pentenoate hydratase | |
| D364_RS11065 | -1 | 18 | 5.208016 | alpha/beta fold hydrolase | |
| D364_RS11070 | -1 | 18 | 5.991797 | 3-carboxyethylcatechol 2,3-dioxygenase | |
| D364_RS11075 | 0 | 15 | 6.078955 | bifunctional | |
| D364_RS11080 | 2 | 17 | 6.430699 | DNA-binding transcriptional regulator | |
| D364_RS11085 | 3 | 19 | 6.102826 | ABC transporter substrate-binding protein | |
| D364_RS11090 | 1 | 19 | 6.331435 | iron ABC transporter permease | |
| D364_RS11095 | 0 | 19 | 5.166535 | ABC transporter ATP-binding protein | |
| D364_RS11100 | -1 | 19 | 4.357011 | substrate-binding domain-containing protein | |
| D364_RS11105 | -2 | 19 | 2.895548 | shikimate dehydrogenase | |
| D364_RS11110 | -1 | 18 | 1.809105 | MFS transporter | |
| D364_RS11115 | 0 | 14 | -0.221791 | sugar phosphate isomerase/epimerase and | |
| D364_RS11120 | 2 | 28 | -4.358322 | TetR family transcriptional regulator | |
| D364_RS11125 | 2 | 23 | -3.069317 | fumarate hydratase FumD | |
| D364_RS11130 | 1 | 21 | -3.031142 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10970 | FERRIBNDNGPP | 39 | 2e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10995 | PF05272 | 29 | 0.022 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11045 | TCRTETB | 50 | 8e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11060 | PF06438 | 29 | 0.014 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11110 | TCRTETA | 48 | 6e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11120 | HTHTETR | 66 | 2e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 40 | D364_RS11180 | D364_RS11220 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS11180 | 1 | 17 | 4.515787 | Fe-S cluster assembly scaffold SufA | |
| D364_RS11185 | 2 | 17 | 4.520656 | hypothetical protein | |
| D364_RS27465 | 1 | 15 | 5.027846 | FMN-dependent L-lactate dehydrogenase LldD | |
| D364_RS11195 | 0 | 16 | 5.335771 | efflux RND transporter permease subunit | |
| D364_RS11200 | 0 | 15 | 4.555362 | efflux RND transporter periplasmic adaptor | |
| D364_RS11205 | 0 | 15 | 5.096837 | TetR/AcrR family transcriptional regulator | |
| D364_RS11210 | 0 | 14 | 3.274113 | NAD(P)H-binding protein | |
| D364_RS11215 | 0 | 14 | 4.118795 | LysR family transcriptional regulator | |
| D364_RS11220 | 0 | 14 | 3.028651 | ABC transporter substrate-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11200 | ACRIFLAVINRP | 440 | e-140 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11205 | RTXTOXIND | 42 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11210 | HTHTETR | 59 | 3e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11215 | NUCEPIMERASE | 37 | 6e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 41 | D364_RS11355 | D364_RS11525 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS11355 | 3 | 22 | -1.860159 | RidA family protein | |
| D364_RS11360 | 4 | 25 | -1.980689 | integration host factor subunit alpha | |
| D364_RS11365 | 3 | 25 | -2.603270 | phenylalanine--tRNA ligase subunit beta | |
| D364_RS11370 | 3 | 31 | -6.399721 | phenylalanine--tRNA ligase subunit alpha | |
| D364_RS27475 | 2 | 31 | -7.636222 | pheST operon leader peptide PheM | |
| D364_RS11375 | 1 | 26 | -6.502462 | 50S ribosomal protein L20 | |
| D364_RS11380 | 0 | 19 | -4.116156 | 50S ribosomal protein L35 | |
| D364_RS11385 | 0 | 17 | -3.658944 | translation initiation factor IF-3 | |
| D364_RS11390 | -1 | 15 | -2.661895 | threonine--tRNA ligase | |
| D364_RS11395 | 0 | 17 | -0.179179 | hypothetical protein | |
| D364_RS11400 | 0 | 16 | -0.203090 | YdiY family protein | |
| D364_RS11405 | 0 | 18 | -0.105829 | 6-phosphofructokinase II | |
| D364_RS11410 | 1 | 26 | -4.447283 | type V toxin-antitoxin system endoribonuclease | |
| D364_RS11415 | 1 | 27 | -4.709119 | fructosamine kinase family protein | |
| D364_RS11420 | -1 | 19 | -3.744670 | TonB system transport protein TonB | |
| D364_RS11425 | -1 | 16 | -4.833594 | YciI family protein | |
| D364_RS27480 | 0 | 16 | -4.948338 | hypothetical protein | |
| D364_RS11435 | 0 | 12 | -4.015536 | YceI family protein | |
| D364_RS27005 | 0 | 10 | -1.829991 | YciY family protein | |
| D364_RS11445 | 0 | 11 | -1.485440 | cardiolipin synthase | |
| D364_RS11450 | 0 | 13 | -1.971902 | HI1450 family dsDNA-mimic protein | |
| D364_RS11455 | -1 | 11 | -2.791227 | ion transporter | |
| D364_RS11460 | -1 | 11 | -2.700435 | murein tripeptide/oligopeptide ABC transporter | |
| D364_RS11465 | -1 | 12 | -3.547319 | ABC transporter ATP-binding protein | |
| D364_RS11470 | 1 | 22 | -4.126388 | oligopeptide ABC transporter permease OppC | |
| D364_RS11475 | 1 | 22 | -4.868919 | oligopeptide ABC transporter permease OppB | |
| D364_RS11480 | 1 | 25 | -5.280030 | oligopeptide ABC transporter substrate-binding | |
| D364_RS11490 | 1 | 30 | -5.601761 | YchE family NAAT transporter | |
| D364_RS11495 | 2 | 32 | -6.039800 | hypothetical protein | |
| D364_RS11500 | 1 | 28 | -5.694699 | bifunctional acetaldehyde-CoA/alcohol | |
| D364_RS11505 | -1 | 32 | -6.075825 | thymidine kinase | |
| D364_RS27485 | 0 | 32 | -6.079577 | hypothetical protein | |
| D364_RS11515 | -1 | 29 | -5.813687 | DNA-binding transcriptional regulator H-NS | |
| D364_RS11520 | -2 | 25 | -4.742308 | UTP--glucose-1-phosphate uridylyltransferase | |
| D364_RS11525 | -1 | 22 | -3.223790 | two-component system response regulator RssB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11360 | DNABINDINGHU | 119 | 5e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11420 | TONBPROTEIN | 229 | 1e-77 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11460 | HTHFIS | 31 | 0.008 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11480 | FLGHOOKAP1 | 30 | 0.040 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11525 | HTHFIS | 87 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 42 | D364_RS27490 | D364_RS11635 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS27490 | -2 | 12 | 3.455167 | hypothetical protein | |
| D364_RS11585 | -1 | 13 | 4.776052 | NarK family nitrate/nitrite MFS transporter | |
| D364_RS11590 | 0 | 14 | 5.242307 | nitrate/nitrite two-component system sensor | |
| D364_RS11595 | 0 | 16 | 5.836702 | two-component system response regulator NarL | |
| D364_RS11600 | 0 | 17 | 6.330240 | YchO/YchP family invasin | |
| D364_RS11605 | 1 | 17 | 6.635784 | nitrate reductase | |
| D364_RS11610 | 1 | 16 | 5.788674 | nitrite reductase large subunit NirB | |
| D364_RS11615 | 4 | 17 | 4.644827 | ABC transporter ATP-binding protein | |
| D364_RS11620 | 4 | 17 | 4.873805 | nitrate ABC transporter permease | |
| D364_RS11625 | 3 | 17 | 4.000721 | ABC transporter substrate-binding protein | |
| D364_RS11635 | 4 | 15 | 1.917227 | nitrate regulatory protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11585 | TCRTETB | 31 | 0.015 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11590 | PF06580 | 48 | 5e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11595 | HTHFIS | 74 | 8e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11600 | INTIMIN | 230 | 3e-69 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 43 | D364_RS11770 | D364_RS11900 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS11770 | 2 | 26 | -3.197726 | type VI secretion protein VasK | |
| D364_RS11775 | 6 | 54 | -12.383041 | hypothetical protein | |
| D364_RS11780 | 10 | 63 | -15.160116 | PAAR domain-containing protein | |
| D364_RS11785 | 4 | 42 | -9.611602 | hypothetical protein | |
| D364_RS27495 | 4 | 42 | -9.214528 | SUMF1/EgtB/PvdO family nonheme iron enzyme | |
| D364_RS27500 | 2 | 31 | -4.158574 | SUMF1/EgtB/PvdO family nonheme iron enzyme | |
| D364_RS11795 | 1 | 29 | -2.672476 | SUMF1/EgtB/PvdO family nonheme iron enzyme | |
| D364_RS11805 | 0 | 21 | 0.533031 | type VI secretion system tip protein VgrG | |
| D364_RS11810 | -1 | 16 | 2.570691 | OmpA family protein | |
| D364_RS27505 | 1 | 14 | 4.110726 | type VI secretion system protein TssL, short | |
| D364_RS11815 | 1 | 12 | 4.620061 | type VI secretion system baseplate subunit TssK | |
| D364_RS11820 | -1 | 12 | 1.871034 | gamma-glutamylcyclotransferase | |
| D364_RS11825 | -1 | 14 | 1.514876 | DUF2058 domain-containing protein | |
| D364_RS11835 | -2 | 17 | 1.444605 | RluA family pseudouridine synthase | |
| D364_RS11840 | -3 | 15 | 1.315239 | cold shock domain-containing protein | |
| D364_RS11845 | -2 | 17 | 2.826334 | LysR family transcriptional regulator | |
| D364_RS11850 | -2 | 17 | 2.312247 | substrate-binding domain-containing protein | |
| D364_RS11855 | -1 | 14 | 3.176176 | MFS transporter | |
| D364_RS11860 | -2 | 12 | 1.832253 | LysR family transcriptional regulator | |
| D364_RS11865 | -1 | 14 | 1.523145 | GNAT family N-acetyltransferase | |
| D364_RS11870 | 1 | 14 | 1.621086 | phosphoenolpyruvate carboxykinase (ATP) | |
| D364_RS11875 | -1 | 14 | 1.441819 | LysR family transcriptional regulator | |
| D364_RS11880 | 0 | 16 | 1.695469 | ABC transporter ATP-binding protein | |
| D364_RS11885 | 1 | 21 | 1.938756 | ATP-binding cassette domain-containing protein | |
| D364_RS11890 | 2 | 22 | 3.194497 | high-affinity branched-chain amino acid ABC | |
| D364_RS11895 | 1 | 22 | 3.017210 | branched-chain amino acid ABC transporter | |
| D364_RS11900 | 0 | 22 | 3.698573 | branched-chain amino acid ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11815 | OMPADOMAIN | 104 | 1e-26 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11840 | TRNSINTIMINR | 29 | 0.013 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11850 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11865 | TCRTETA | 40 | 1e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11875 | SACTRNSFRASE | 44 | 3e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 44 | D364_RS27515 | D364_RS12100 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS27515 | 4 | 18 | 3.345520 | PhnD/SsuA/transferrin family substrate-binding | |
| D364_RS11950 | 4 | 18 | 3.650045 | fatty acid desaturase | |
| D364_RS11960 | 2 | 17 | 2.321268 | proteasome-type protease | |
| D364_RS11965 | -1 | 16 | 2.269693 | transglutaminase family protein | |
| D364_RS11975 | 0 | 17 | 2.742215 | alpha-E domain-containing protein | |
| D364_RS11980 | 0 | 16 | 3.442353 | circularly permuted type 2 ATP-grasp protein | |
| D364_RS26125 | -1 | 17 | 3.946868 | hypothetical protein | |
| D364_RS11985 | -1 | 18 | 4.350345 | alpha,alpha-trehalase | |
| D364_RS11990 | 0 | 19 | 4.625797 | TonB-dependent siderophore receptor | |
| D364_RS11995 | -1 | 20 | 4.441287 | membrane-bound lytic murein transglycosylase | |
| D364_RS12000 | -1 | 18 | 2.984374 | muramoyltetrapeptide carboxypeptidase | |
| D364_RS12005 | -1 | 16 | 1.885212 | potassium/proton antiporter | |
| D364_RS12010 | -1 | 15 | 1.411917 | catabolic alanine racemase DadX | |
| D364_RS12015 | -1 | 13 | 0.239632 | D-amino acid dehydrogenase | |
| D364_RS27520 | 0 | 13 | -1.243904 | hypothetical protein | |
| D364_RS12025 | 1 | 14 | -0.926291 | SpoVR family protein | |
| D364_RS12030 | 1 | 14 | 0.093367 | fatty acid metabolism transcriptional regulator | |
| D364_RS12035 | 2 | 15 | -0.377740 | sodium/proton antiporter NhaB | |
| D364_RS12040 | 1 | 19 | -3.080402 | disulfide bond formation protein DsbB | |
| D364_RS12045 | 0 | 20 | -3.701909 | DUF1971 domain-containing protein | |
| D364_RS12050 | 1 | 19 | -3.943615 | YcgN family cysteine cluster protein | |
| D364_RS12055 | 1 | 14 | -2.071103 | fumarylacetoacetate hydrolase family protein | |
| D364_RS12060 | -1 | 10 | -2.157449 | YcgL domain-containing protein | |
| D364_RS12070 | -2 | 9 | -1.053603 | septum site-determining protein MinC | |
| D364_RS12075 | -2 | 11 | 0.335761 | septum site-determining protein MinD | |
| D364_RS12080 | -1 | 14 | 2.005060 | cell division topological specificity factor | |
| D364_RS12085 | 0 | 13 | 2.121605 | ribonuclease D | |
| D364_RS12090 | -1 | 14 | 1.672451 | long-chain-fatty-acid--CoA ligase FadD | |
| D364_RS12095 | -1 | 13 | 3.162040 | Slp family lipoprotein | |
| D364_RS12100 | -1 | 14 | 3.573224 | tRNA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11995 | VACJLIPOPROT | 27 | 0.043 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS12010 | ALARACEMASE | 539 | 0.0 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 45 | D364_RS12480 | D364_RS12515 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS12480 | -1 | 12 | -3.463198 | L-arabinose ABC transporter ATP-binding protein | |
| D364_RS12485 | 0 | 15 | -4.922164 | arabinose ABC transporter substrate-binding | |
| D364_RS27525 | 0 | 14 | -3.213094 | non-heme ferritin-like protein | |
| D364_RS12490 | 0 | 11 | -2.963648 | succinate dehydrogenase | |
| D364_RS12495 | 0 | 12 | -3.724637 | MFS transporter | |
| D364_RS12500 | -1 | 13 | -3.586048 | DUF2766 domain-containing protein | |
| D364_RS12505 | 1 | 17 | -3.786492 | MFS transporter | |
| D364_RS12510 | 0 | 14 | -2.146842 | RpiB/LacA/LacB family sugar-phosphate isomerase | |
| D364_RS12515 | -1 | 16 | -3.318513 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS12480 | PF05272 | 34 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS12510 | TCRTETB | 104 | 2e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 46 | D364_RS12760 | D364_RS12890 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS12760 | 2 | 26 | -4.482767 | *EmmdR/YeeO family multidrug/toxin efflux MATE | |
| D364_RS12775 | 2 | 61 | -17.761492 | *type II toxin-antitoxin system PemK/MazF family | |
| D364_RS12780 | 2 | 47 | -14.222858 | antitoxin | |
| D364_RS12785 | 1 | 40 | -11.874695 | helix-turn-helix domain-containing protein | |
| D364_RS12790 | 0 | 34 | -10.620155 | hypothetical protein | |
| D364_RS26170 | 0 | 32 | -8.790011 | hypothetical protein | |
| D364_RS26175 | -1 | 25 | -5.622331 | sensor domain-containing diguanylate cyclase | |
| D364_RS12805 | -1 | 13 | 2.133472 | alpha/beta hydrolase | |
| D364_RS12810 | 0 | 14 | 2.257423 | hypothetical protein | |
| D364_RS12815 | -1 | 17 | 1.740727 | LysR family transcriptional regulator | |
| D364_RS12820 | 1 | 16 | -1.411133 | DUF1869 domain-containing protein | |
| D364_RS12825 | 1 | 19 | -4.484030 | DUF1971 domain-containing protein | |
| D364_RS12830 | 0 | 16 | -4.462744 | hypothetical protein | |
| D364_RS12835 | 0 | 15 | -2.198248 | EAL domain-containing protein | |
| D364_RS27530 | -1 | 13 | -0.627489 | molybdopterin-dependent oxidoreductase | |
| D364_RS12845 | -1 | 12 | -0.192819 | shikimate transporter | |
| D364_RS12850 | -1 | 14 | 3.113701 | lipoate--protein ligase family protein | |
| D364_RS12860 | -1 | 15 | 4.555534 | LysR family transcriptional regulator | |
| D364_RS12865 | 2 | 16 | 5.849971 | tautomerase family protein | |
| D364_RS12870 | 3 | 16 | 5.449811 | HPP family protein | |
| D364_RS12875 | 3 | 15 | 4.001974 | adenosylhomocysteinase | |
| D364_RS12880 | 4 | 16 | 4.056572 | nicotinate-nucleotide--dimethylbenzimidazole | |
| D364_RS12885 | 3 | 17 | 3.600353 | adenosylcobinamide-GDP ribazoletransferase | |
| D364_RS12890 | 2 | 14 | 2.840420 | DUF496 family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS12810 | ENTEROTOXINA | 29 | 0.025 | Heat-labile enterotoxin A chain signature. | |
>ENTEROTOXINA#Heat-labile enterotoxin A chain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS12860 | TCRTETB | 30 | 0.021 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS12900 | FbpA_PF05833 | 28 | 0.011 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| 47 | D364_RS27030 | D364_RS13200 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS27030 | -1 | 15 | 4.058950 | SDR family oxidoreductase | |
| D364_RS12950 | 0 | 18 | 4.553195 | his operon leader peptide | |
| D364_RS12955 | 0 | 24 | 3.897596 | ATP phosphoribosyltransferase | |
| D364_RS27035 | 0 | 27 | 3.470623 | histidinol dehydrogenase | |
| D364_RS12965 | 1 | 25 | 4.024747 | histidinol-phosphate transaminase | |
| D364_RS12975 | -2 | 18 | -3.404384 | bifunctional | |
| D364_RS12980 | -2 | 28 | -8.496684 | imidazole glycerol phosphate synthase subunit | |
| D364_RS12985 | -1 | 35 | -10.880953 | 1-(5-phosphoribosyl)-5-[(5- | |
| D364_RS12990 | 1 | 46 | -14.190322 | imidazole glycerol phosphate synthase subunit | |
| D364_RS12995 | 1 | 56 | -17.534502 | bifunctional phosphoribosyl-AMP | |
| D364_RS13000 | 2 | 62 | -18.712384 | glycosyltransferase | |
| D364_RS13005 | 3 | 59 | -18.921956 | glycosyltransferase family 4 protein | |
| D364_RS13010 | 3 | 47 | -16.100304 | glycosyltransferase | |
| D364_RS13015 | 2 | 47 | -16.217442 | UDP-galactopyranose mutase | |
| D364_RS13020 | 1 | 37 | -14.289579 | DUF4422 domain-containing protein | |
| D364_RS13025 | 2 | 20 | -7.472900 | O-antigen export ABC transporter ATP-binding | |
| D364_RS13030 | 3 | 18 | -4.097946 | O-antigen export ABC transporter permease RfbA | |
| D364_RS13035 | 3 | 20 | -2.628501 | NAD-dependent epimerase | |
| D364_RS27040 | 3 | 21 | -6.796133 | small membrane protein | |
| D364_RS13050 | 3 | 22 | -8.250467 | UDP-glucose 6-dehydrogenase | |
| D364_RS13055 | 3 | 34 | -11.916670 | O9 family phosphomannomutase RfbK1 | |
| D364_RS13060 | 3 | 52 | -17.244113 | mannose-1-phosphate | |
| D364_RS13065 | 3 | 71 | -22.494547 | NADP-dependent phosphogluconate dehydrogenase | |
| D364_RS13070 | 4 | 83 | -26.173945 | undecaprenyl-phosphate glucose | |
| D364_RS26180 | 4 | 83 | -26.880975 | acyltransferase | |
| D364_RS26185 | 4 | 82 | -27.058535 | O-antigen ligase family protein | |
| D364_RS13080 | 6 | 84 | -26.605750 | glycosyltransferase | |
| D364_RS13085 | 5 | 83 | -26.230852 | polysaccharide export protein | |
| D364_RS13090 | 4 | 81 | -24.192935 | capsule assembly Wzi family protein | |
| D364_RS13095 | 5 | 70 | -19.832844 | hypothetical protein | |
| D364_RS13100 | 4 | 67 | -18.107098 | phosphatase PAP2 family protein | |
| D364_RS13105 | 4 | 59 | -14.416435 | GalU regulator GalF | |
| D364_RS26190 | 4 | 32 | -7.148870 | TerC family protein | |
| D364_RS13110 | 1 | 20 | -4.547918 | outer membrane assembly protein AsmA | |
| D364_RS13115 | 1 | 10 | -0.582408 | dCTP deaminase | |
| D364_RS27535 | 2 | 11 | 0.975551 | uridine kinase | |
| D364_RS13125 | 1 | 11 | 0.241900 | DNA-3-methyladenine glycosylase 2 | |
| D364_RS13130 | 2 | 11 | 1.518689 | molecular chaperone | |
| D364_RS13135 | 2 | 12 | 2.441031 | sensor histidine kinase | |
| D364_RS13140 | 2 | 14 | 3.840114 | response regulator transcription factor | |
| D364_RS13145 | 0 | 13 | 4.007831 | small membrane protein | |
| D364_RS13150 | 1 | 14 | 3.323355 | positive transcription regulator | |
| D364_RS13155 | 1 | 12 | 3.135501 | dicarboxylate/amino acid:cation symporter | |
| D364_RS13160 | 0 | 14 | 1.705991 | MdtA/MuxA family multidrug efflux RND | |
| D364_RS13165 | 0 | 13 | 1.894713 | MdtB/MuxB family multidrug efflux RND | |
| D364_RS13170 | 1 | 19 | 3.042537 | multidrug efflux RND transporter permease | |
| D364_RS27045 | 2 | 24 | 3.710510 | MFS transporter | |
| D364_RS13180 | 3 | 25 | 4.192576 | two-component system sensor histidine kinase | |
| D364_RS13185 | 3 | 27 | 5.111754 | two-component system response regulator BaeR | |
| D364_RS13190 | 3 | 27 | 5.409100 | tRNA 5-hydroxyuridine modification protein YegQ | |
| D364_RS13195 | 2 | 27 | 4.568418 | lipid kinase YegS | |
| D364_RS13200 | 0 | 22 | 3.763669 | ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS12965 | RTXTOXINA | 30 | 0.028 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13000 | GPOSANCHOR | 32 | 0.004 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13015 | NUCEPIMERASE | 29 | 0.031 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13035 | NUCEPIMERASE | 583 | 0.0 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS26180 | IGASERPTASE | 28 | 0.049 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13160 | SHAPEPROTEIN | 48 | 5e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13170 | HTHFIS | 66 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13190 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13195 | ACRIFLAVINRP | 898 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13200 | ACRIFLAVINRP | 890 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13205 | TCRTETB | 123 | 5e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13210 | BCTERIALGSPF | 36 | 2e-04 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13215 | HTHFIS | 77 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13230 | PF05272 | 30 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 48 | D364_RS13290 | D364_RS13395 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS13290 | 0 | 12 | 3.257470 | RbtT/DalT/CsbX family MFS transporter | |
| D364_RS13300 | 0 | 14 | 3.069819 | class I fructose-bisphosphate aldolase | |
| D364_RS13310 | 0 | 15 | 6.038282 | bifunctional hydroxymethylpyrimidine | |
| D364_RS13315 | 0 | 14 | 5.532354 | hydroxyethylthiazole kinase | |
| D364_RS13325 | -1 | 13 | 4.366878 | universal stress protein | |
| D364_RS13330 | -1 | 13 | 4.633940 | LysR family transcriptional regulator | |
| D364_RS13335 | 0 | 13 | 4.184441 | adenine deaminase | |
| D364_RS13340 | -2 | 18 | 2.192536 | NCS2 family permease | |
| D364_RS13345 | -1 | 18 | 1.278534 | LysR family transcriptional regulator | |
| D364_RS13350 | 0 | 20 | 0.753997 | RcnB family protein | |
| D364_RS13355 | 0 | 20 | 1.344450 | GNAT family N-acetyltransferase | |
| D364_RS13360 | 0 | 21 | 1.040736 | iron-sulfur cluster carrier protein ApbC | |
| D364_RS13365 | 0 | 19 | 1.659304 | methionine--tRNA ligase | |
| D364_RS13370 | 3 | 22 | 3.149917 | DUF1456 family protein | |
| D364_RS13375 | 4 | 19 | 4.720531 | two-component system response regulator BtsR | |
| D364_RS13380 | 3 | 19 | 4.993629 | sensor histidine kinase | |
| D364_RS13385 | 0 | 18 | 4.352229 | protein YohO | |
| D364_RS13390 | -1 | 15 | 3.636065 | ABC transporter permease | |
| D364_RS13395 | -1 | 15 | 3.246285 | ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13300 | TCRTETB | 39 | 3e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13335 | UREASE | 35 | 0.001 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13355 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13375 | HTHFIS | 71 | 3e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13380 | PF06580 | 211 | 1e-65 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 49 | D364_RS13720 | D364_RS13810 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS13720 | -2 | 12 | 3.098270 | SulP family inorganic anion transporter | |
| D364_RS13725 | -1 | 14 | 3.887270 | magnesium transporter | |
| D364_RS13730 | -2 | 15 | 2.570956 | multidrug ABC transporter permease/ATP-binding | |
| D364_RS13735 | -1 | 11 | 0.961393 | DNA oxidative demethylase AlkB | |
| D364_RS13740 | -1 | 12 | -0.144771 | bifunctional DNA-binding transcriptional | |
| D364_RS13750 | 0 | 10 | -1.568524 | FAD:protein FMN transferase ApbE | |
| D364_RS13755 | 1 | 10 | -1.903257 | porin OmpC | |
| D364_RS13760 | 1 | 11 | -1.522904 | phosphotransferase RcsD | |
| D364_RS13765 | 2 | 16 | -1.417141 | transcriptional regulator RcsB | |
| D364_RS13770 | 2 | 16 | -1.140723 | two-component system sensor histidine kinase | |
| D364_RS13775 | 3 | 19 | -1.500326 | DNA topoisomerase (ATP-hydrolyzing) subunit A | |
| D364_RS13780 | 0 | 18 | -1.916056 | bifunctional 3-demethylubiquinone | |
| D364_RS13785 | 0 | 18 | -0.511733 | ribonucleoside-diphosphate reductase subunit | |
| D364_RS13790 | -2 | 13 | 1.196069 | ribonucleotide-diphosphate reductase subunit | |
| D364_RS13795 | -2 | 10 | 1.941343 | 2Fe-2S ferredoxin-like protein | |
| D364_RS13800 | -2 | 10 | 2.208268 | glycerophosphodiester phosphodiesterase | |
| D364_RS13805 | -2 | 10 | 3.345907 | glycerol-3-phosphate transporter | |
| D364_RS13810 | -2 | 11 | 3.857292 | anaerobic glycerol-3-phosphate dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13755 | ECOLIPORIN | 547 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13765 | HTHFIS | 50 | 2e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13770 | HTHFIS | 84 | 9e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13800 | VACCYTOTOXIN | 29 | 0.039 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13805 | TCRTETA | 29 | 0.029 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 50 | D364_RS13865 | D364_RS13890 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS13865 | 1 | 13 | 4.202101 | nucleoside triphosphatase NudI | |
| D364_RS13870 | 2 | 14 | 4.946567 | o-succinylbenzoate--CoA ligase | |
| D364_RS13875 | 1 | 13 | 4.820469 | o-succinylbenzoate synthase | |
| D364_RS13880 | 0 | 13 | 4.176891 | 1,4-dihydroxy-2-naphthoyl-CoA synthase | |
| D364_RS13885 | 1 | 13 | 4.284242 | 2-succinyl-6-hydroxy-2, | |
| D364_RS13890 | 1 | 14 | 3.118093 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13870 | ALARACEMASE | 36 | 4e-04 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 51 | D364_RS27540 | D364_RS14080 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS27540 | 1 | 15 | -3.546899 | GNAT family N-acetyltransferase | |
| D364_RS14060 | 1 | 13 | -3.572449 | histidine ABC transporter ATP-binding protein | |
| D364_RS14065 | 2 | 15 | -4.591625 | histidine ABC transporter permease HisM | |
| D364_RS14070 | 2 | 13 | -3.980671 | histidine ABC transporter permease HisQ | |
| D364_RS14075 | 0 | 14 | -3.097485 | histidine ABC transporter substrate-binding | |
| D364_RS14080 | 1 | 14 | -3.972689 | lysine/arginine/ornithine ABC transporter |
| 52 | D364_RS14215 | D364_RS14435 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS14215 | 1 | 17 | -3.789100 | YfcZ/YiiS family protein | |
| D364_RS14220 | 0 | 15 | -2.926313 | long-chain fatty acid transporter FadL | |
| D364_RS14225 | 0 | 20 | -3.426064 | phospholipid-binding lipoprotein MlaA | |
| D364_RS14230 | 3 | 20 | -1.346759 | formate/nitrite transporter family protein | |
| D364_RS14240 | 4 | 21 | -0.944831 | *WbuC family cupin fold metalloprotein | |
| D364_RS14245 | 2 | 18 | -1.253580 | hypothetical protein | |
| D364_RS14250 | 2 | 17 | 0.223233 | transcriptional regulator CynR | |
| D364_RS14255 | 1 | 18 | -0.259003 | nucleoside deaminase | |
| D364_RS14260 | 1 | 14 | -1.430799 | cyanate transporter | |
| D364_RS27055 | 1 | 15 | -4.900906 | membrane protein YpdK | |
| D364_RS14265 | 1 | 12 | -3.802676 | alanine transaminase | |
| D364_RS14270 | 0 | 13 | -2.153279 | hypothetical protein | |
| D364_RS27550 | -1 | 11 | -0.365630 | hypothetical protein | |
| D364_RS14280 | -1 | 11 | -0.362584 | sensor histidine kinase | |
| D364_RS14285 | -1 | 11 | 0.529193 | LytTR family DNA-binding domain-containing | |
| D364_RS14290 | -1 | 11 | 1.456593 | glucokinase | |
| D364_RS14295 | -1 | 11 | 0.264153 | ion channel protein | |
| D364_RS14300 | -2 | 14 | -2.775539 | indolepyruvate decarboxylase | |
| D364_RS14305 | -2 | 16 | -4.325066 | L-glyceraldehyde 3-phosphate reductase | |
| D364_RS14310 | -2 | 16 | -4.588082 | DUF2502 domain-containing protein | |
| D364_RS14315 | -3 | 15 | -4.592100 | Nramp family divalent metal transporter | |
| D364_RS14320 | -2 | 17 | -4.718802 | nucleoside permease NupC | |
| D364_RS14325 | -2 | 16 | -3.787159 | EAL domain-containing protein | |
| D364_RS14340 | -1 | 12 | -1.822158 | **putative DNA-binding transcriptional regulator | |
| D364_RS14345 | -1 | 10 | -0.470005 | putative DNA-binding transcriptional regulator | |
| D364_RS14350 | -2 | 10 | -0.053474 | glutamate--tRNA ligase | |
| D364_RS14375 | -1 | 10 | 0.565893 | ****LysR family transcriptional regulator | |
| D364_RS14380 | -2 | 9 | 0.106161 | bile acid:sodium symporter | |
| D364_RS14385 | -1 | 11 | -0.014609 | DUF3820 family protein | |
| D364_RS14390 | 0 | 15 | -1.593182 | NAD-dependent DNA ligase LigA | |
| D364_RS14395 | 0 | 22 | -3.808336 | cell division protein ZipA | |
| D364_RS14405 | 0 | 24 | -4.945649 | sulfate transporter CysZ | |
| D364_RS14410 | 0 | 22 | -3.908791 | cysteine synthase A | |
| D364_RS14420 | 0 | 16 | -1.635152 | phosphocarrier protein Hpr | |
| D364_RS14425 | -1 | 15 | -1.514308 | phosphoenolpyruvate-protein phosphotransferase | |
| D364_RS14430 | -2 | 12 | 1.506075 | PTS glucose transporter subunit IIA | |
| D364_RS14435 | 0 | 14 | 3.068073 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14225 | VACJLIPOPROT | 381 | e-138 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14260 | TCRTETA | 33 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14280 | PF06580 | 217 | 5e-68 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14285 | HTHFIS | 55 | 6e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14395 | IGASERPTASE | 51 | 4e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14425 | PHPHTRNFRASE | 746 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 53 | D364_RS14520 | D364_RS14590 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS14520 | -2 | 12 | 3.161940 | ethanolamine utilization microcompartment | |
| D364_RS14525 | -1 | 13 | 2.987248 | ethanolamine utilization microcompartment | |
| D364_RS14530 | 0 | 14 | 3.419172 | ethanolamine ammonia-lyase subunit EutC | |
| D364_RS14535 | 0 | 15 | 3.707564 | ethanolamine ammonia-lyase subunit alpha | |
| D364_RS14540 | 0 | 15 | 3.719430 | ethanolamine ammonia-lyase reactivating factor | |
| D364_RS14545 | 2 | 13 | 4.390020 | ethanolamine utilization protein EutH | |
| D364_RS14550 | 3 | 13 | 3.903403 | ethanolamine utilization ethanol dehydrogenase | |
| D364_RS14555 | 3 | 15 | 5.742578 | ethanolamine utilization protein EutJ | |
| D364_RS14560 | 2 | 15 | 5.203903 | aldehyde dehydrogenase EutE | |
| D364_RS14565 | 1 | 17 | 4.959956 | ethanolamine utilization microcompartment | |
| D364_RS14570 | 1 | 15 | 4.044446 | ethanolamine utilization microcompartment | |
| D364_RS14575 | 1 | 16 | 3.487336 | phosphate acetyltransferase | |
| D364_RS14580 | 1 | 15 | 2.699257 | ethanolamine utilization cob(I)yrinic acid | |
| D364_RS14585 | 1 | 14 | 1.346267 | ethanolamine utilization acetate kinase EutQ | |
| D364_RS14590 | 2 | 13 | 1.498738 | ethanolamine utilization acetate kinase EutP |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14560 | SHAPEPROTEIN | 46 | 7e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 54 | D364_RS14745 | D364_RS15075 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS14745 | -2 | 8 | -3.038899 | phosphoribosylformylglycinamidine cyclo-ligase | |
| D364_RS14750 | -2 | 11 | -2.637905 | phosphoribosylglycinamide formyltransferase | |
| D364_RS14755 | -2 | 10 | -2.343284 | polyphosphate kinase 1 | |
| D364_RS14760 | 0 | 17 | -2.300743 | exopolyphosphatase | |
| D364_RS14765 | 0 | 22 | -3.931745 | sensor domain-containing phosphodiesterase | |
| D364_RS14770 | -2 | 14 | -2.430006 | DUF2633 family protein | |
| D364_RS14775 | -2 | 14 | -1.823907 | LysR family transcriptional regulator | |
| D364_RS14780 | -2 | 14 | -1.532114 | MFS transporter | |
| D364_RS14785 | -1 | 14 | -2.079135 | anaerobic sulfatase maturase | |
| D364_RS14790 | -2 | 13 | -0.354357 | sulfatase-like hydrolase/transferase | |
| D364_RS14795 | 0 | 18 | 1.501565 | glutamine-hydrolyzing GMP synthase | |
| D364_RS14800 | -2 | 15 | -0.677688 | IMP dehydrogenase | |
| D364_RS14805 | 1 | 25 | -3.281707 | exodeoxyribonuclease VII large subunit | |
| D364_RS14810 | 3 | 36 | -6.138299 | zinc ribbon domain-containing protein | |
| D364_RS14815 | 4 | 40 | -6.149536 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS14825 | 4 | 46 | -8.555207 | hypothetical protein | |
| D364_RS26770 | 4 | 46 | -8.879682 | hypothetical protein | |
| D364_RS14835 | 4 | 44 | -8.457675 | DNA-protecting protein DprA | |
| D364_RS14850 | 3 | 42 | -7.251439 | hypothetical protein | |
| D364_RS14860 | 4 | 41 | -6.238364 | phage tail length tape measure family protein | |
| D364_RS14865 | 2 | 26 | -0.734423 | hypothetical protein | |
| D364_RS27560 | 2 | 25 | -0.014152 | hypothetical protein | |
| D364_RS14875 | 2 | 25 | -0.314111 | hypothetical protein | |
| D364_RS14880 | 2 | 25 | 1.159011 | PerC family transcriptional regulator | |
| D364_RS14885 | 3 | 24 | 0.527230 | single-stranded DNA-binding protein | |
| D364_RS14890 | 2 | 25 | -0.468727 | TOPRIM and DUF927 domain-containing protein | |
| D364_RS14895 | 1 | 35 | -4.305677 | hypothetical protein | |
| D364_RS14900 | 0 | 36 | -5.320749 | hypothetical protein | |
| D364_RS14905 | 0 | 34 | -5.365239 | hypothetical protein | |
| D364_RS14910 | 0 | 35 | -5.289923 | hypothetical protein | |
| D364_RS26235 | 2 | 43 | -9.651427 | ash family protein | |
| D364_RS14925 | 1 | 40 | -9.721545 | DUF4222 domain-containing protein | |
| D364_RS14930 | 0 | 28 | -7.275279 | hypothetical protein | |
| D364_RS14935 | 0 | 23 | -5.837782 | hypothetical protein | |
| D364_RS14940 | -1 | 22 | -5.725617 | AlpA family phage regulatory protein | |
| D364_RS14945 | 0 | 18 | -4.429158 | hypothetical protein | |
| D364_RS14950 | 0 | 13 | -1.687468 | site-specific integrase | |
| D364_RS14955 | 1 | 15 | -0.452586 | ribosome biogenesis GTPase Der | |
| D364_RS14960 | 1 | 16 | -0.545455 | outer membrane protein assembly factor BamB | |
| D364_RS14965 | 2 | 18 | -0.736437 | YfgM family protein | |
| D364_RS14970 | 0 | 11 | 2.056047 | histidine--tRNA ligase | |
| D364_RS14975 | -1 | 12 | 3.162987 | flavodoxin-dependent | |
| D364_RS14980 | 0 | 11 | 3.877632 | cytoskeleton protein RodZ | |
| D364_RS14985 | -1 | 10 | 3.744423 | bifunctional tRNA | |
| D364_RS14990 | -1 | 11 | 3.911288 | nucleoside-diphosphate kinase | |
| D364_RS14995 | 0 | 11 | 3.944663 | peptidoglycan glycosyltransferase PbpC | |
| D364_RS15000 | 0 | 13 | 2.800267 | 3-mercaptopyruvate sulfurtransferase | |
| D364_RS15005 | -2 | 13 | 0.737801 | hypothetical protein | |
| D364_RS15010 | -2 | 13 | 1.316305 | enhanced serine sensitivity protein SseB | |
| D364_RS15015 | 0 | 16 | 0.946585 | aminopeptidase PepB | |
| D364_RS15020 | 0 | 16 | 0.962621 | Fe-S cluster assembly protein IscX | |
| D364_RS15025 | 2 | 18 | -0.005383 | ISC system 2Fe-2S type ferredoxin | |
| D364_RS15030 | 1 | 19 | -0.509565 | Fe-S protein assembly chaperone HscA | |
| D364_RS15035 | 1 | 19 | -0.425090 | co-chaperone HscB | |
| D364_RS15040 | 1 | 21 | -2.124698 | iron-sulfur cluster assembly protein IscA | |
| D364_RS15045 | 2 | 23 | -1.878821 | Fe-S cluster assembly scaffold IscU | |
| D364_RS15050 | -1 | 19 | -1.030660 | cysteine desulfurase | |
| D364_RS15055 | -1 | 15 | 0.564042 | Fe-S cluster assembly transcriptional regulator | |
| D364_RS15060 | 0 | 14 | 1.099435 | tRNA | |
| D364_RS15065 | 0 | 11 | 0.892107 | inositol-1-monophosphatase | |
| D364_RS15070 | 1 | 10 | 1.261624 | hypothetical protein | |
| D364_RS15075 | 2 | 13 | 0.805556 | nickel/cobalt transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14780 | TCRTETA | 31 | 0.006 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14825 | FLGPRINGFLGI | 32 | 5e-04 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS14860 | CHANLCOLICIN | 38 | 2e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15035 | SHAPEPROTEIN | 109 | 3e-28 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 55 | D364_RS15400 | D364_RS15450 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS15400 | 1 | 21 | -3.010652 | 50S ribosomal protein L19 | |
| D364_RS15410 | 1 | 21 | -3.448663 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | |
| D364_RS15415 | 0 | 15 | -2.608310 | ribosome maturation factor RimM | |
| D364_RS15420 | 1 | 16 | -2.349932 | 30S ribosomal protein S16 | |
| D364_RS15425 | 1 | 16 | -1.484886 | signal recognition particle protein | |
| D364_RS15430 | 2 | 16 | -0.102391 | inner membrane protein YpjD | |
| D364_RS15435 | 3 | 14 | -0.577105 | HlyC/CorC family transporter | |
| D364_RS15440 | 3 | 14 | -0.344003 | nucleotide exchange factor GrpE | |
| D364_RS15445 | 3 | 15 | -0.612217 | NAD(+) kinase | |
| D364_RS15450 | 2 | 15 | -0.567225 | DNA repair protein RecN |
| 56 | D364_RS15525 | D364_RS15680 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS15525 | 0 | 20 | 3.370394 | sugar phosphate isomerase/epimerase | |
| D364_RS15530 | 0 | 21 | 4.049454 | isopenicillin N synthase family oxygenase | |
| D364_RS15535 | 0 | 20 | 3.799490 | ABC transporter substrate-binding protein | |
| D364_RS15540 | 0 | 21 | 3.871501 | amino acid ABC transporter permease/ATP-binding | |
| D364_RS15550 | -1 | 13 | 0.590046 | class II aldolase/adducin family protein | |
| D364_RS15555 | -1 | 13 | -1.152665 | glyoxylate/hydroxypyruvate reductase A | |
| D364_RS15560 | 1 | 18 | -4.731525 | SDR family NAD(P)-dependent oxidoreductase | |
| D364_RS15565 | 1 | 22 | -5.496251 | hypothetical protein | |
| D364_RS15570 | 1 | 25 | -6.368678 | transporter substrate-binding domain-containing | |
| D364_RS15575 | 1 | 24 | -5.753414 | helix-turn-helix transcriptional regulator | |
| D364_RS15580 | 0 | 17 | -1.905037 | type 1 fimbrial protein | |
| D364_RS15585 | 0 | 17 | -1.505953 | molecular chaperone | |
| D364_RS15590 | 0 | 16 | -0.845908 | fimbrial biogenesis outer membrane usher | |
| D364_RS15595 | 0 | 14 | 0.504546 | fimbrial protein | |
| D364_RS15600 | -1 | 14 | 2.780692 | fimbrial protein | |
| D364_RS15605 | -1 | 13 | 3.324023 | fimbrial biogenesis outer membrane usher | |
| D364_RS15610 | -1 | 12 | 3.352502 | molecular chaperone | |
| D364_RS15615 | -2 | 14 | 4.117859 | fimbrial protein | |
| D364_RS15620 | 0 | 14 | 5.099449 | aldehyde dehydrogenase | |
| D364_RS15625 | 0 | 16 | 4.208650 | sigma-54-dependent Fis family transcriptional | |
| D364_RS15630 | -1 | 19 | 2.595255 | LysR family transcriptional regulator | |
| D364_RS15635 | 1 | 18 | -0.338738 | NAD(P)H-dependent oxidoreductase | |
| D364_RS15640 | -1 | 18 | -1.652622 | metalloregulator ArsR/SmtB family transcription | |
| D364_RS15645 | 2 | 20 | -3.295280 | rhodanese family protein | |
| D364_RS15650 | 1 | 21 | -5.099679 | lipid A hydroxylase LpxO | |
| D364_RS15655 | -1 | 22 | 0.015190 | hypothetical protein | |
| D364_RS15660 | 0 | 20 | 0.096761 | DNA-binding protein StpA | |
| D364_RS15670 | 0 | 19 | 1.647764 | L-alanine exporter AlaE | |
| D364_RS15675 | 1 | 21 | 2.015060 | DUF2002 family protein | |
| D364_RS15680 | -2 | 14 | 3.065695 | DUF883 domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15560 | DHBDHDRGNASE | 94 | 5e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15590 | PF00577 | 719 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15595 | PF05616 | 29 | 0.037 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15605 | PF00577 | 739 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15625 | HTHFIS | 285 | 4e-92 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 57 | D364_RS15785 | D364_RS15845 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS15785 | 2 | 18 | -0.428519 | DedA family protein | |
| D364_RS15790 | 3 | 23 | -0.710872 | fructose-1-phosphate/6-phosphogluconate | |
| D364_RS15795 | 4 | 22 | -0.631974 | BON domain-containing protein | |
| D364_RS15815 | 3 | 21 | -0.008731 | ***carbon storage regulator CsrA | |
| D364_RS15820 | 1 | 17 | 1.084556 | alanine--tRNA ligase | |
| D364_RS15825 | 0 | 14 | 2.398644 | recombination regulator RecX | |
| D364_RS15830 | -1 | 15 | 2.625865 | recombinase RecA | |
| D364_RS15835 | 0 | 16 | 3.238065 | nicotinamide-nucleotide amidase | |
| D364_RS15840 | -1 | 15 | 3.282943 | metal ABC transporter substrate-binding protein | |
| D364_RS15845 | -1 | 16 | 3.708760 | metal ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15820 | LUXSPROTEIN | 29 | 0.035 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15840 | adhesinb | 237 | 2e-79 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15845 | TYPE3IMSPROT | 28 | 0.040 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 58 | D364_RS15890 | D364_RS16000 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS15890 | 0 | 13 | 4.185662 | arabinose-5-phosphate isomerase GutQ | |
| D364_RS15895 | 0 | 14 | 4.096505 | nitric oxide reductase transcriptional regulator | |
| D364_RS15905 | -1 | 14 | 3.795985 | anaerobic nitric oxide reductase | |
| D364_RS15910 | 0 | 15 | 4.715593 | NADH:flavorubredoxin reductase NorW | |
| D364_RS15915 | -1 | 15 | 3.999094 | HoxN/HupN/NixA family nickel/cobalt transporter | |
| D364_RS15920 | -1 | 15 | 4.155057 | carbamoyltransferase HypF | |
| D364_RS15925 | -1 | 17 | 2.186032 | electron transport protein HydN | |
| D364_RS15930 | -1 | 18 | 2.114521 | LacI family DNA-binding transcriptional | |
| D364_RS15940 | 0 | 18 | 2.050067 | PTS cellobiose/arbutin/salicin transporter | |
| D364_RS15945 | -1 | 18 | 1.306336 | 6-phospho-beta-glucosidase | |
| D364_RS15950 | 1 | 21 | 2.413925 | type I toxin-antitoxin system SymE family toxin | |
| D364_RS15955 | 0 | 22 | 2.547271 | hydrogenase maturation peptidase HycI | |
| D364_RS15960 | 0 | 23 | 3.758907 | formate hydrogenlyase maturation HycH family | |
| D364_RS15965 | 0 | 22 | 4.058263 | NADH-quinone oxidoreductase subunit B family | |
| D364_RS15970 | 1 | 23 | 3.694413 | formate hydrogenlyase complex iron-sulfur | |
| D364_RS15975 | 2 | 21 | 3.690499 | formate hydrogenlyase subunit HycE | |
| D364_RS15980 | 2 | 15 | 4.131599 | respiratory chain complex I subunit 1 family | |
| D364_RS15985 | 2 | 17 | 4.126760 | formate hydrogenlyase subunit 3 | |
| D364_RS15990 | 1 | 19 | 3.057743 | 4Fe-4S dicluster domain-containing protein | |
| D364_RS15995 | 0 | 18 | 3.923428 | formate hydrogenlyase regulator HycA | |
| D364_RS16000 | -1 | 18 | 3.831112 | hydrogenase maturation nickel metallochaperone |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15895 | HTHFIS | 372 | e-126 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 59 | D364_RS16060 | D364_RS16145 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS16060 | 1 | 14 | 3.354745 | PTS lactose/cellobiose transporter subunit IIA | |
| D364_RS16065 | 1 | 14 | 3.284819 | ROK family protein | |
| D364_RS16070 | 1 | 14 | 2.691791 | LacI family transcriptional regulator | |
| D364_RS16075 | 2 | 15 | 1.924370 | metal ABC transporter substrate-binding protein | |
| D364_RS16080 | 2 | 14 | -0.046206 | manganese/iron ABC transporter ATP-binding | |
| D364_RS16085 | 1 | 13 | 0.815326 | iron/manganese ABC transporter permease subunit | |
| D364_RS16090 | 1 | 12 | 0.555999 | metal ABC transporter permease | |
| D364_RS16095 | 0 | 15 | 0.710099 | nitrous oxide-stimulated promoter family | |
| D364_RS16100 | 0 | 15 | 1.308586 | LysR family transcriptional regulator | |
| D364_RS16105 | -1 | 16 | 2.223066 | AEC family transporter | |
| D364_RS16110 | 0 | 18 | 4.330328 | thiamine pyrophosphate-requiring protein | |
| D364_RS16115 | 1 | 19 | 4.636770 | SelT/SelW/SelH family protein | |
| D364_RS16120 | 1 | 16 | 3.170512 | TonB-dependent receptor | |
| D364_RS16125 | 2 | 13 | 2.236737 | hemin-degrading factor | |
| D364_RS16130 | 2 | 19 | -0.869559 | hemin ABC transporter substrate-binding protein | |
| D364_RS16135 | -1 | 12 | 0.518506 | iron ABC transporter permease | |
| D364_RS16140 | -2 | 14 | -1.864471 | heme ABC transporter ATP-binding protein | |
| D364_RS16145 | -2 | 16 | -3.795815 | Hcp family type VI secretion system effector |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16075 | adhesinb | 330 | e-116 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16130 | FERRIBNDNGPP | 36 | 7e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16140 | PF05272 | 28 | 0.048 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 60 | D364_RS16400 | D364_RS16455 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS16400 | -2 | 11 | 3.100408 | aliphatic sulfonate ABC transporter | |
| D364_RS16405 | -1 | 13 | 3.221977 | acyl-CoA dehydrogenase family protein | |
| D364_RS16410 | -1 | 13 | 4.218669 | MFS transporter | |
| D364_RS16415 | 0 | 14 | 5.281992 | methionine ABC transporter substrate-binding | |
| D364_RS16420 | 2 | 15 | 6.097290 | ABC transporter permease | |
| D364_RS16425 | 2 | 14 | 6.647147 | ATP-binding cassette domain-containing protein | |
| D364_RS16430 | 1 | 16 | 6.585135 | LLM class flavin-dependent oxidoreductase | |
| D364_RS16435 | 0 | 15 | 6.856432 | FAD-dependent oxidoreductase | |
| D364_RS16440 | -1 | 15 | 5.327876 | FMNH2-dependent alkanesulfonate monooxygenase | |
| D364_RS27565 | -1 | 15 | 3.479464 | hypothetical protein | |
| D364_RS16450 | -2 | 15 | 3.657734 | sigma-54-dependent Fis family transcriptional | |
| D364_RS16455 | -1 | 15 | 3.232554 | flap endonuclease Xni |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16410 | TCRTETA | 40 | 1e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16450 | HTHFIS | 378 | e-127 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 61 | D364_RS16515 | D364_RS16625 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS16515 | -1 | 14 | 4.110329 | YgdI/YgdR family lipoprotein | |
| D364_RS16520 | 0 | 14 | 4.711237 | cysteine desulfurase CsdA | |
| D364_RS16525 | 0 | 16 | 4.327588 | cysteine desulfurase sulfur acceptor subunit | |
| D364_RS16530 | 1 | 18 | 4.154638 | tRNA cyclic N6-threonylcarbamoyladenosine(37) | |
| D364_RS16535 | 2 | 18 | 4.131547 | murein transglycosylase A | |
| D364_RS16555 | 3 | 21 | 4.572417 | ***nicotinate-nucleotide--dimethylbenzimidazole | |
| D364_RS16560 | 3 | 20 | 3.909992 | bifunctional adenosylcobinamide | |
| D364_RS16565 | 3 | 21 | 4.361911 | cobyric acid synthase | |
| D364_RS16570 | 2 | 20 | 3.681002 | energy-coupling factor ABC transporter | |
| D364_RS16575 | 3 | 18 | 4.417188 | energy-coupling factor ABC transporter | |
| D364_RS16580 | 2 | 19 | 4.185591 | energy-coupling factor ABC transporter | |
| D364_RS16585 | 1 | 19 | 5.253099 | cobalt ECF transporter S component CbiM | |
| D364_RS16590 | -1 | 19 | 5.416778 | cobalt-factor II C(20)-methyltransferase | |
| D364_RS16595 | -1 | 19 | 5.131418 | sirohydrochlorin cobaltochelatase | |
| D364_RS16600 | -1 | 20 | 6.035809 | cobalt-precorrin-6A reductase | |
| D364_RS16605 | -1 | 20 | 5.449294 | precorrin-3B C(17)-methyltransferase | |
| D364_RS16610 | -1 | 21 | 6.031449 | cobalt-precorrin 5A hydrolase | |
| D364_RS16615 | 1 | 19 | 5.631395 | cobalt-precorrin-4 methyltransferase | |
| D364_RS16620 | 2 | 17 | 5.355026 | decarboxylating cobalt-precorrin-6B | |
| D364_RS16625 | 0 | 15 | 3.588651 | cobalt-precorrin-7 (C(5))-methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16605 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 62 | D364_RS16690 | D364_RS16810 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS16690 | 0 | 19 | 3.648751 | glycerol dehydratase reactivase beta/small | |
| D364_RS16695 | 2 | 18 | 4.476050 | propanediol utilization microcompartment protein | |
| D364_RS16700 | 0 | 18 | 4.019084 | BMC domain-containing protein | |
| D364_RS16705 | 2 | 16 | 4.192235 | phosphate propanoyltransferase | |
| D364_RS16710 | 1 | 15 | 4.818857 | microcompartment protein PduM | |
| D364_RS16715 | 0 | 15 | 4.571796 | ethanolamine utilization protein EutN | |
| D364_RS16720 | 0 | 15 | 4.406673 | two-domain cob(I)yrinic acid a,c-diamide | |
| D364_RS16725 | 0 | 14 | 4.102213 | CoA-acylating propionaldehyde dehydrogenase | |
| D364_RS16730 | 0 | 13 | 4.370263 | 1-propanol dehydrogenase PduQ | |
| D364_RS16735 | 1 | 16 | 4.525803 | SLBB domain-containing protein | |
| D364_RS16740 | 2 | 19 | 4.499684 | propanediol utilization microcompartment protein | |
| D364_RS16745 | 0 | 17 | 3.720128 | propanediol utilization microcompartment protein | |
| D364_RS16750 | 0 | 17 | 2.952615 | propanediol utilization protein PduV | |
| D364_RS16755 | 1 | 16 | 2.723835 | acetate/propionate family kinase | |
| D364_RS16760 | 2 | 16 | 4.371082 | L-threonine kinase | |
| D364_RS16765 | 1 | 16 | 4.476866 | threonine-phosphate decarboxylase | |
| D364_RS16770 | 0 | 14 | 3.376499 | N-acetylmuramoyl-L-alanine amidase AmiC | |
| D364_RS16775 | 2 | 15 | 3.579774 | amino-acid N-acetyltransferase | |
| D364_RS16780 | 2 | 15 | 4.043108 | hypothetical protein | |
| D364_RS16785 | 2 | 16 | 4.360709 | exodeoxyribonuclease V subunit alpha | |
| D364_RS16790 | 2 | 15 | 3.910640 | exodeoxyribonuclease V subunit beta | |
| D364_RS16795 | 2 | 14 | 3.323261 | pitrilysin | |
| D364_RS16800 | 3 | 17 | 4.026998 | exodeoxyribonuclease V subunit gamma | |
| D364_RS16805 | 0 | 18 | 3.580917 | prepilin-type N-terminal cleavage/methylation | |
| D364_RS16810 | 1 | 16 | 3.711699 | DUF2509 family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16755 | ACETATEKNASE | 558 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16805 | BCTERIALGSPH | 26 | 0.035 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| 63 | D364_RS17015 | D364_RS17045 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS17015 | -2 | 20 | -5.267932 | amino acid permease | |
| D364_RS17020 | -1 | 21 | -5.461465 | aldo/keto reductase family oxidoreductase | |
| D364_RS17025 | 1 | 21 | -5.154111 | transcriptional activator MrkH | |
| D364_RS17030 | 1 | 15 | -4.416157 | transcriptional regulator MrkI | |
| D364_RS17035 | 2 | 15 | -3.243976 | phosphodiesterase MrkJ | |
| D364_RS17040 | 4 | 14 | -2.625884 | type 3 fimbria minor subunit MrkF | |
| D364_RS17045 | 4 | 13 | -1.617313 | type 3 fimbria adhesin subunit MrkD |
| 64 | D364_RS17100 | D364_RS17170 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS17100 | 2 | 14 | 0.928801 | type 1 fimbrial major subunit FimA | |
| D364_RS17110 | 3 | 14 | 1.930566 | type 1 fimbrial protein | |
| D364_RS17115 | 3 | 15 | 2.226203 | fimbria/pilus periplasmic chaperone | |
| D364_RS17120 | 2 | 14 | 2.335184 | fimbrial biogenesis usher protein | |
| D364_RS17130 | -1 | 13 | 1.246025 | type 1 fimbrial protein | |
| D364_RS17135 | -1 | 13 | 0.670435 | type 1 fimbrial protein | |
| D364_RS17140 | -1 | 15 | 1.361947 | fimbrial protein | |
| D364_RS17145 | -1 | 12 | 3.036599 | EAL domain-containing protein | |
| D364_RS17150 | -1 | 15 | 4.083321 | N-acetyltransferase | |
| D364_RS17155 | -1 | 14 | 4.330985 | (4Fe-4S)-binding protein | |
| D364_RS17160 | -1 | 14 | 3.966980 | hypothetical protein | |
| D364_RS17165 | -1 | 14 | 4.128799 | multidrug transporter subunit MdtN | |
| D364_RS17170 | 0 | 13 | 3.610438 | multidrug efflux transporter permease subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17125 | PF00577 | 977 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17150 | SACTRNSFRASE | 28 | 0.002 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17165 | RTXTOXIND | 68 | 7e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17170 | TYPE3IMSPROT | 29 | 0.049 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 65 | D364_RS17215 | D364_RS17515 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS17215 | -1 | 25 | -3.409535 | LysR family transcriptional regulator | |
| D364_RS17220 | 0 | 27 | -3.685317 | hypothetical protein | |
| D364_RS17225 | 0 | 27 | -3.482562 | NAD(P)H-dependent oxidoreductase | |
| D364_RS17230 | 0 | 28 | -3.584594 | aldo/keto reductase | |
| D364_RS17235 | 0 | 34 | -5.308432 | carboxymuconolactone decarboxylase family | |
| D364_RS17240 | 1 | 36 | -6.622634 | SDR family oxidoreductase | |
| D364_RS17245 | 0 | 34 | -6.773567 | cyclic diguanylate phosphodiesterase | |
| D364_RS17250 | 1 | 34 | -7.930227 | hypothetical protein | |
| D364_RS17255 | 1 | 36 | -8.931205 | CrcB family protein | |
| D364_RS17260 | 2 | 37 | -10.133486 | fluoride efflux transporter CrcB | |
| D364_RS17265 | 2 | 37 | -10.348462 | response regulator | |
| D364_RS17270 | 4 | 40 | -11.420631 | acid-sensing system DNA-binding response | |
| D364_RS17275 | 5 | 39 | -10.870159 | EmrA/EmrK family multidrug efflux transporter | |
| D364_RS17280 | 6 | 41 | -11.770338 | DHA2 family efflux MFS transporter permease | |
| D364_RS17285 | 5 | 33 | -9.108293 | DUF308 domain-containing protein | |
| D364_RS17290 | 5 | 30 | -7.990600 | acid-activated periplasmic chaperone HdeB | |
| D364_RS17295 | 4 | 30 | -7.591566 | ammonium transporter | |
| D364_RS17300 | 3 | 27 | -7.429823 | urease subunit gamma | |
| D364_RS17305 | 3 | 28 | -7.449130 | urease subunit beta | |
| D364_RS17310 | 3 | 28 | -6.591901 | urease subunit alpha | |
| D364_RS17315 | 3 | 34 | -6.984194 | urease accessory protein UreE | |
| D364_RS17320 | 4 | 35 | -6.347390 | urease accessory protein UreF | |
| D364_RS17325 | 4 | 36 | -6.038117 | urease accessory protein UreG | |
| D364_RS17330 | 3 | 36 | -5.284478 | urease accessory protein UreD | |
| D364_RS17335 | 3 | 36 | -4.782803 | urea transporter | |
| D364_RS17340 | 2 | 37 | -5.263982 | ABC transporter substrate-binding protein | |
| D364_RS17345 | 3 | 39 | -5.425020 | ABC transporter permease | |
| D364_RS17350 | 2 | 38 | -5.610343 | ABC transporter permease | |
| D364_RS17355 | 3 | 41 | -7.418344 | ATP-binding cassette domain-containing protein | |
| D364_RS17360 | 2 | 49 | -10.413941 | ATP-binding cassette domain-containing protein | |
| D364_RS17365 | 2 | 50 | -10.951174 | acid-activated periplasmic chaperone HdeA | |
| D364_RS17370 | 2 | 52 | -11.401224 | SEL1-like repeat protein | |
| D364_RS26290 | 2 | 53 | -12.033781 | response regulator | |
| D364_RS17385 | 2 | 55 | -12.793712 | FUSC family protein | |
| D364_RS17390 | 2 | 52 | -11.083261 | response regulator | |
| D364_RS25615 | 2 | 43 | -7.160389 | alpha/beta fold hydrolase | |
| D364_RS17405 | 3 | 43 | -7.896416 | LysR family transcriptional regulator | |
| D364_RS17410 | 2 | 48 | -9.265549 | MFS transporter | |
| D364_RS27130 | 1 | 50 | -10.602150 | tyrosine-type recombinase/integrase | |
| D364_RS17420 | 1 | 52 | -10.723839 | hypothetical protein | |
| D364_RS17425 | 2 | 54 | -12.292993 | major capsid protein | |
| D364_RS17430 | 5 | 62 | -16.158265 | hypothetical protein | |
| D364_RS17435 | 5 | 68 | -17.527171 | hypothetical protein | |
| D364_RS17440 | 5 | 64 | -18.959183 | hypothetical protein | |
| D364_RS17445 | 6 | 62 | -19.756938 | hypothetical protein | |
| D364_RS27585 | 6 | 60 | -20.470030 | helix-turn-helix domain-containing protein | |
| D364_RS17450 | 2 | 62 | -21.443881 | hypothetical protein | |
| D364_RS27135 | 3 | 62 | -19.049813 | hypothetical protein | |
| D364_RS25530 | 4 | 66 | -19.971349 | hypothetical protein | |
| D364_RS27590 | 3 | 51 | -14.531652 | recombinase family protein | |
| D364_RS17460 | 2 | 42 | -11.545910 | DUF4062 domain-containing protein | |
| D364_RS27140 | 0 | 28 | -8.308883 | *peptidoglycan DD-metalloendopeptidase family | |
| D364_RS17465 | 1 | 27 | -6.063346 | isopentenyl-diphosphate Delta-isomerase | |
| D364_RS17470 | -1 | 17 | -2.694535 | lysine--tRNA ligase | |
| D364_RS17480 | -1 | 14 | 0.546277 | peptide chain release factor 2 | |
| D364_RS17490 | 0 | 14 | 0.812768 | single-stranded-DNA-specific exonuclease RecJ | |
| D364_RS17495 | 0 | 15 | 0.561033 | bifunctional protein-disulfide | |
| D364_RS17500 | -2 | 15 | 1.719720 | site-specific tyrosine recombinase XerD | |
| D364_RS17505 | 0 | 14 | 2.306217 | flavodoxin FldB | |
| D364_RS17510 | 2 | 14 | 1.315857 | protein YgfX | |
| D364_RS17515 | 2 | 14 | 1.141336 | FAD assembly factor SdhE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17265 | HTHFIS | 68 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17270 | HTHFIS | 70 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17275 | RTXTOXIND | 64 | 4e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17280 | TCRTETB | 130 | 4e-35 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17310 | UREASE | 969 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17385 | HTHFIS | 48 | 9e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17405 | HTHFIS | 42 | 9e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17425 | TCRTETB | 126 | 4e-34 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17435 | 56KDTSANTIGN | 33 | 0.002 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17480 | RTXTOXIND | 40 | 6e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17510 | ADHESNFAMILY | 31 | 0.005 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 66 | D364_RS17655 | D364_RS17720 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS17655 | 2 | 27 | -1.741821 | oxidative stress defense protein | |
| D364_RS17665 | 3 | 32 | -1.470134 | arginine exporter ArgO | |
| D364_RS17675 | 4 | 34 | -1.230891 | small-conductance mechanosensitive channel MscS | |
| D364_RS17680 | 3 | 32 | -1.582932 | class II fructose-bisphosphate aldolase | |
| D364_RS17685 | 1 | 22 | -0.119689 | phosphoglycerate kinase | |
| D364_RS17690 | 0 | 16 | 0.921818 | erythrose-4-phosphate dehydrogenase | |
| D364_RS17695 | 0 | 15 | 1.779418 | transketolase | |
| D364_RS17700 | 1 | 15 | 1.739495 | M48 family metallopeptidase | |
| D364_RS17705 | 2 | 16 | 2.361452 | OprD family outer membrane porin | |
| D364_RS17710 | 2 | 19 | 2.922216 | thiamine pyrophosphate-binding protein | |
| D364_RS17715 | 2 | 19 | 2.332995 | aspartate dehydrogenase | |
| D364_RS17720 | 2 | 15 | 2.602465 | SDR family oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17725 | DHBDHDRGNASE | 108 | 1e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 67 | D364_RS17905 | D364_RS17955 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS17905 | -2 | 13 | -3.743622 | DUF554 domain-containing protein | |
| D364_RS17910 | 0 | 19 | -3.429122 | *RNA-directed DNA polymerase | |
| D364_RS17915 | 3 | 22 | -3.456768 | fimbrial biogenesis outer membrane usher | |
| D364_RS17920 | 5 | 32 | -5.337889 | molecular chaperone | |
| D364_RS17930 | 6 | 36 | -6.061090 | molecular chaperone | |
| D364_RS17935 | 7 | 36 | -6.048731 | fimbrial protein | |
| D364_RS17940 | 9 | 34 | -4.766697 | fimbrial protein | |
| D364_RS17945 | 8 | 37 | -5.859857 | molecular chaperone | |
| D364_RS17950 | 7 | 48 | -8.167891 | fimbrial-like protein | |
| D364_RS17955 | 3 | 33 | -4.341622 | cystathionine beta-synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17945 | PF00577 | 725 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 68 | D364_RS18210 | D364_RS18330 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS18210 | 2 | 12 | 2.973511 | bifunctional | |
| D364_RS18215 | 1 | 12 | 2.606123 | bifunctional [glutamate--ammonia | |
| D364_RS27605 | 0 | 13 | 3.486320 | inorganic triphosphatase | |
| D364_RS18225 | 0 | 13 | 3.284396 | SH3 domain-containing protein | |
| D364_RS18230 | 0 | 12 | 2.813303 | multifunctional CCA addition/repair protein | |
| D364_RS18235 | -2 | 12 | 1.573194 | undecaprenyl-diphosphate phosphatase | |
| D364_RS18240 | -1 | 12 | 0.679771 | bifunctional dihydroneopterin | |
| D364_RS18245 | -2 | 14 | 1.070094 | glycerol-3-phosphate 1-O-acyltransferase PlsY | |
| D364_RS18250 | -1 | 15 | 0.203309 | hypothetical protein | |
| D364_RS18255 | 1 | 19 | 1.592949 | short-chain dehydrogenase | |
| D364_RS18260 | 1 | 20 | 3.480592 | urease accessory protein UreD | |
| D364_RS27610 | 2 | 20 | 4.195801 | urease subunit gamma | |
| D364_RS18270 | 2 | 20 | 4.117650 | urease subunit beta | |
| D364_RS18275 | 1 | 21 | 5.133002 | urease subunit alpha | |
| D364_RS18280 | 1 | 22 | 4.458873 | urease accessory protein UreE | |
| D364_RS18285 | 1 | 20 | 3.797468 | urease accessory protein UreF | |
| D364_RS18290 | 0 | 19 | 3.864551 | urease accessory protein UreG | |
| D364_RS18295 | -3 | 17 | 3.011362 | cytosine permease | |
| D364_RS18300 | -2 | 12 | 1.572058 | tRNA | |
| D364_RS18305 | 0 | 14 | -0.340597 | 30S ribosomal protein S21 | |
| D364_RS18310 | -1 | 13 | -0.082302 | DNA primase | |
| D364_RS18315 | 1 | 13 | -0.652265 | RNA polymerase sigma factor RpoD | |
| D364_RS18320 | 1 | 14 | -1.765390 | G/U mismatch-specific DNA glycosylase | |
| D364_RS18330 | 2 | 12 | -0.621329 | *hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS18225 | LPSBIOSNTHSS | 29 | 0.029 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS18255 | LIPPROTEIN48 | 27 | 0.016 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS18290 | UREASE | 1082 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 69 | D364_RS18435 | D364_RS18515 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS18435 | 0 | 16 | 3.320366 | hypothetical protein | |
| D364_RS18440 | 0 | 16 | 3.725035 | dihydroxyacetone kinase subunit DhaK | |
| D364_RS18445 | 0 | 14 | 3.487362 | dihydroxyacetone kinase ADP-binding subunit | |
| D364_RS18450 | 0 | 15 | 3.295600 | dihydroxyacetone kinase subunit DhaM | |
| D364_RS18455 | -1 | 15 | 2.568637 | glycerone kinase | |
| D364_RS18460 | 0 | 17 | 1.053466 | siderophore-interacting protein | |
| D364_RS18470 | -1 | 17 | 1.309081 | PadR family transcriptional regulator | |
| D364_RS18475 | 0 | 17 | 1.958967 | putrescine aminotransferase | |
| D364_RS18480 | -1 | 17 | 2.858654 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione | |
| D364_RS18485 | 0 | 16 | 3.543128 | 3-hydroxy-5-phosphonooxypentane-2,4-dione | |
| D364_RS18490 | -1 | 14 | 4.284880 | autoinducer 2 ABC transporter substrate-binding | |
| D364_RS18495 | 0 | 13 | 4.671474 | histidine kinase | |
| D364_RS18500 | 0 | 13 | 4.091829 | autoinducer 2 ABC transporter permease LsrC | |
| D364_RS18505 | 1 | 13 | 4.113398 | autoinducer 2 ABC transporter ATP-binding | |
| D364_RS18510 | 0 | 14 | 3.998604 | transcriptional regulator LsrR | |
| D364_RS18515 | 0 | 13 | 3.143276 | autoinducer-2 kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS18445 | ADHESNFAMILY | 28 | 0.019 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS18450 | PHPHTRNFRASE | 151 | 4e-42 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 70 | D364_RS20050 | D364_RS20175 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS20050 | 2 | 11 | 1.168041 | RNA polymerase sigma factor RpoH | |
| D364_RS20055 | 4 | 13 | 0.095096 | permease-like cell division protein FtsX | |
| D364_RS20060 | 4 | 13 | 0.584955 | cell division ATP-binding protein FtsE | |
| D364_RS20065 | 3 | 13 | 0.407646 | signal recognition particle-docking protein | |
| D364_RS20070 | 2 | 12 | 3.267886 | 16S rRNA (guanine(966)-N(2))-methyltransferase | |
| D364_RS20075 | 1 | 14 | 4.392090 | DUF1145 family protein | |
| D364_RS20080 | 1 | 12 | 3.304279 | DUF2500 domain-containing protein | |
| D364_RS20085 | 1 | 13 | 3.579469 | lysoplasmalogenase | |
| D364_RS20090 | 2 | 13 | 4.034530 | Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase | |
| D364_RS20095 | 2 | 13 | 3.969723 | sulfurtransferase TusA | |
| D364_RS20100 | 4 | 16 | 1.882795 | 7-cyano-7-deazaguanine/7-aminomethyl-7- | |
| D364_RS20105 | 3 | 16 | 2.061922 | DcrB family lipoprotein | |
| D364_RS20110 | 4 | 15 | 2.778726 | MFS transporter | |
| D364_RS20115 | 2 | 13 | 3.238159 | AI-2E family transporter | |
| D364_RS20120 | 0 | 14 | 2.387589 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol | |
| D364_RS20125 | -2 | 17 | 2.249876 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol | |
| D364_RS20130 | -2 | 16 | 2.271434 | lipid IV(A) | |
| D364_RS20135 | -2 | 16 | 1.524127 | 4-deoxy-4-formamido-L-arabinose- | |
| D364_RS20140 | -1 | 16 | 2.083651 | bifunctional UDP-4-amino-4-deoxy-L-arabinose | |
| D364_RS20145 | -2 | 15 | 2.330692 | undecaprenyl-phosphate | |
| D364_RS20150 | -1 | 15 | 3.088867 | UDP-4-amino-4-deoxy-L-arabinose | |
| D364_RS20155 | 0 | 15 | 3.769488 | phenolic acid decarboxylase | |
| D364_RS20160 | 2 | 16 | 4.475475 | LysR family transcriptional regulator | |
| D364_RS20165 | 4 | 15 | 5.648205 | nickel ABC transporter substrate-binding | |
| D364_RS20170 | 4 | 16 | 5.098132 | nickel ABC transporter permease subunit NikB | |
| D364_RS20175 | 6 | 14 | 4.186842 | nickel ABC transporter permease subunit NikC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20070 | IGASERPTASE | 51 | 1e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20100 | PF01206 | 103 | 3e-33 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20115 | TCRTETA | 49 | 2e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20130 | BCTERIALGSPC | 32 | 2e-04 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20145 | NUCEPIMERASE | 113 | 2e-29 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20150 | ACRIFLAVINRP | 31 | 0.011 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 71 | D364_RS20235 | D364_RS20380 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS20235 | -2 | 19 | 3.169278 | oligopeptidase A | |
| D364_RS20240 | -2 | 18 | 3.557183 | phosphatase PAP2 family protein | |
| D364_RS20245 | -2 | 18 | 3.578517 | 23S rRNA (adenine(2030)-N(6))-methyltransferase | |
| D364_RS20250 | -2 | 15 | 3.667636 | glutathione-disulfide reductase | |
| D364_RS20255 | 0 | 15 | 4.042265 | glutathione S-transferase | |
| D364_RS20260 | 0 | 14 | 3.885283 | iron-containing alcohol dehydrogenase | |
| D364_RS20265 | -1 | 15 | 2.980589 | alpha,alpha-trehalase | |
| D364_RS20270 | -1 | 15 | 3.123499 | GNAT family N-acetyltransferase | |
| D364_RS20275 | 0 | 16 | 2.762150 | SDR family oxidoreductase | |
| D364_RS20280 | -2 | 15 | 2.527774 | LysR family transcriptional regulator | |
| D364_RS20285 | -2 | 14 | 1.796877 | inner membrane protein YhjD | |
| D364_RS20290 | -2 | 12 | 1.922654 | MHS family MFS transporter | |
| D364_RS20295 | -1 | 13 | 3.197754 | AsmA family protein | |
| D364_RS20305 | 0 | 12 | 3.344438 | sugar kinase | |
| D364_RS20310 | 0 | 14 | 3.334313 | insulinase family protein | |
| D364_RS20315 | -1 | 15 | 3.189853 | dicarboxylate/amino acid:cation symporter | |
| D364_RS20320 | 0 | 15 | 3.791671 | biofilm formation regulator HmsP | |
| D364_RS20330 | -1 | 16 | 3.927519 | cellulose biosynthesis protein BcsC | |
| D364_RS20335 | -3 | 12 | 1.558374 | cellulase | |
| D364_RS20340 | -3 | 12 | 1.042707 | cellulose biosynthesis cyclic di-GMP-binding | |
| D364_RS20345 | -2 | 11 | 0.435396 | UDP-forming cellulose synthase catalytic | |
| D364_RS20350 | 0 | 12 | 0.362443 | cellulose biosynthesis protein BcsQ | |
| D364_RS20355 | -1 | 12 | -0.090405 | YhjR family protein | |
| D364_RS20360 | 0 | 12 | 2.406773 | cellulose biosynthesis protein BcsE | |
| D364_RS20365 | 0 | 14 | 3.727270 | cellulose biosynthesis protein BcsF | |
| D364_RS20370 | -1 | 14 | 3.029343 | cellulose biosynthesis protein BcsG | |
| D364_RS20375 | -1 | 14 | 2.944487 | endoglucanase | |
| D364_RS20380 | -1 | 12 | 3.068761 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20240 | SURFACELAYER | 31 | 0.008 | Lactobacillus surface layer protein signature. | |
>SURFACELAYER#Lactobacillus surface layer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20275 | DHBDHDRGNASE | 85 | 6e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20285 | DPTHRIATOXIN | 30 | 0.015 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20290 | TCRTETB | 32 | 0.006 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20370 | FLGMRINGFLIF | 29 | 0.045 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| 72 | D364_RS20845 | D364_RS20880 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS20845 | 0 | 23 | -5.676780 | dUTP diphosphatase | |
| D364_RS20850 | 1 | 29 | -7.714392 | nucleoid occlusion factor SlmA | |
| D364_RS20855 | 1 | 33 | -8.770358 | orotate phosphoribosyltransferase | |
| D364_RS20860 | 2 | 45 | -12.458765 | ribonuclease PH | |
| D364_RS20865 | 2 | 43 | -12.461356 | ABC transporter permease | |
| D364_RS20870 | 1 | 43 | -11.959950 | ABC transporter ATP-binding protein | |
| D364_RS20875 | 2 | 39 | -10.328235 | HlyD family efflux transporter periplasmic | |
| D364_RS27630 | 2 | 32 | -6.920902 | hypothetical protein | |
| D364_RS20880 | 1 | 28 | -5.802109 | YicC family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20850 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20865 | ABC2TRNSPORT | 45 | 2e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20875 | RTXTOXIND | 58 | 2e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 73 | D364_RS21075 | D364_RS21200 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS21075 | 0 | 16 | 3.020432 | helix-turn-helix domain-containing protein | |
| D364_RS21080 | -1 | 19 | 4.048881 | MBL fold metallo-hydrolase | |
| D364_RS21085 | 0 | 18 | 3.400333 | NUDIX hydrolase | |
| D364_RS21090 | -1 | 20 | 3.551255 | DMT family transporter | |
| D364_RS21095 | 0 | 19 | 3.499844 | lipoprotein NlpA | |
| D364_RS21100 | 0 | 18 | 3.733261 | AraC family transcriptional regulator | |
| D364_RS21105 | 3 | 19 | 4.535413 | peroxidase-related enzyme | |
| D364_RS21110 | 2 | 18 | 3.407731 | nuclear transport factor 2 family protein | |
| D364_RS21115 | 2 | 19 | 3.033316 | pyridoxamine 5'-phosphate oxidase family | |
| D364_RS21120 | 3 | 18 | 2.423871 | LysR family transcriptional regulator | |
| D364_RS21125 | 2 | 19 | 1.406858 | MFS transporter | |
| D364_RS21130 | 0 | 16 | 1.377785 | TetR/AcrR family transcriptional regulator | |
| D364_RS21135 | -2 | 16 | 2.867023 | GNAT family N-acetyltransferase | |
| D364_RS21145 | -2 | 18 | 3.502250 | hypothetical protein | |
| D364_RS27635 | -1 | 20 | 4.208955 | hypothetical protein | |
| D364_RS27640 | -1 | 21 | 4.537983 | multidrug efflux RND transporter periplasmic | |
| D364_RS21165 | -1 | 22 | 5.026285 | multidrug efflux RND transporter permease | |
| D364_RS21170 | -1 | 22 | 4.776610 | multidrug efflux RND transporter outer membrane | |
| D364_RS21175 | 1 | 20 | 4.183612 | multidrug effflux MFS transporter | |
| D364_RS21180 | 1 | 18 | 3.657223 | N-acetylmuramic acid 6-phosphate etherase | |
| D364_RS21185 | 0 | 15 | 3.815875 | PTS N-acetylmuramic acid transporter subunit | |
| D364_RS21190 | 0 | 14 | 3.860559 | DMT family transporter | |
| D364_RS21195 | -1 | 14 | 3.153802 | hypothetical protein | |
| D364_RS21200 | -1 | 14 | 3.490543 | NAD(P)-dependent oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21130 | TCRTETB | 138 | 4e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21135 | HTHTETR | 72 | 7e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21145 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21165 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21170 | ACRIFLAVINRP | 1146 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21180 | TCRTETA | 67 | 2e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 74 | D364_RS21430 | D364_RS21680 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS21430 | 3 | 11 | -1.494832 | YceK/YidQ family lipoprotein | |
| D364_RS21435 | 3 | 12 | -0.910796 | DUF3748 domain-containing protein | |
| D364_RS21440 | 3 | 14 | -0.644899 | MFS transporter | |
| D364_RS21445 | 3 | 15 | -0.876563 | galactonate dehydratase | |
| D364_RS21450 | 3 | 13 | -1.515620 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | |
| D364_RS21455 | 3 | 17 | -1.639594 | 2-dehydro-3-deoxygalactonokinase | |
| D364_RS21460 | 0 | 15 | -1.292414 | D-galactonate utilization transcriptional | |
| D364_RS21465 | -2 | 11 | -1.801353 | BamA/TamA family outer membrane protein | |
| D364_RS21470 | -1 | 11 | -1.914799 | hypothetical protein | |
| D364_RS21475 | -1 | 13 | -1.755528 | sugar-phosphatase | |
| D364_RS21480 | 0 | 16 | -1.946440 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |
| D364_RS21485 | 1 | 18 | -1.849862 | DNA replication/repair protein RecF | |
| D364_RS21490 | 3 | 17 | -1.633447 | DNA polymerase III subunit beta | |
| D364_RS21495 | 3 | 17 | -1.785005 | chromosomal replication initiator protein DnaA | |
| D364_RS21500 | 2 | 17 | -2.269367 | 50S ribosomal protein L34 | |
| D364_RS21505 | 0 | 14 | -0.825557 | ribonuclease P protein component | |
| D364_RS21510 | -1 | 13 | -0.214129 | membrane protein insertion efficiency factor | |
| D364_RS26470 | -2 | 11 | 0.411491 | membrane protein insertase YidC | |
| D364_RS21520 | -1 | 11 | 0.645419 | tRNA uridine-5-carboxymethylaminomethyl(34) | |
| D364_RS21525 | 0 | 13 | 0.839221 | GNAT family N-acetyltransferase | |
| D364_RS21530 | 2 | 12 | 1.713018 | MFS transporter | |
| D364_RS21535 | 0 | 11 | 0.747597 | HTH-type transcriptional regulator YidZ | |
| D364_RS21540 | 0 | 10 | 0.170106 | phosphopantetheinyl transferase | |
| D364_RS21545 | 0 | 12 | -0.829568 | NAD(P)H-dependent oxidoreductase | |
| D364_RS21550 | -2 | 13 | -1.287091 | NCS2 family permease | |
| D364_RS21555 | -1 | 12 | -3.063392 | 6-phosphogluconate phosphatase | |
| D364_RS21560 | -2 | 10 | -3.153707 | glucosamine-6-phosphate deaminase | |
| D364_RS21570 | -2 | 9 | -4.244868 | esterase family protein | |
| D364_RS21575 | -2 | 11 | -3.852256 | carbohydrate porin | |
| D364_RS21580 | -2 | 12 | -3.477036 | phosphate signaling complex protein PhoU | |
| D364_RS21585 | -2 | 16 | -3.846590 | phosphate ABC transporter ATP-binding protein | |
| D364_RS21595 | -1 | 22 | -2.178158 | phosphate ABC transporter permease PstA | |
| D364_RS21600 | -2 | 21 | -1.600226 | phosphate ABC transporter permease PstC | |
| D364_RS21605 | -2 | 20 | -1.376927 | phosphate ABC transporter substrate-binding | |
| D364_RS21610 | 0 | 25 | -2.056437 | glutamine--fructose-6-phosphate transaminase | |
| D364_RS21620 | 2 | 32 | -2.513601 | bifunctional UDP-N-acetylglucosamine | |
| D364_RS21625 | 2 | 34 | -3.271243 | F0F1 ATP synthase subunit epsilon | |
| D364_RS21645 | 3 | 41 | -4.577307 | F0F1 ATP synthase subunit beta | |
| D364_RS21650 | 4 | 43 | -4.544938 | F0F1 ATP synthase subunit gamma | |
| D364_RS21655 | 3 | 36 | -5.312425 | F0F1 ATP synthase subunit alpha | |
| D364_RS21660 | 4 | 38 | -5.628144 | F0F1 ATP synthase subunit delta | |
| D364_RS21665 | 4 | 27 | -6.271864 | F0F1 ATP synthase subunit B | |
| D364_RS21670 | 2 | 23 | -4.089527 | F0F1 ATP synthase subunit C | |
| D364_RS21675 | 1 | 20 | -3.624638 | F0F1 ATP synthase subunit A | |
| D364_RS21680 | 1 | 18 | -3.860354 | F0F1 ATP synthase subunit I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21450 | TCRTETA | 42 | 4e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21525 | 60KDINNERMP | 814 | 0.0 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21535 | SACTRNSFRASE | 38 | 5e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21540 | TCRTETA | 58 | 2e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21560 | TYPE3IMSPROT | 31 | 0.013 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21580 | OUTRMMBRANEA | 30 | 0.014 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21670 | TRNSINTIMINR | 29 | 0.009 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| 75 | D364_RS21755 | D364_RS21850 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS21755 | 1 | 22 | -3.627216 | multidrug transporter subunit MdtD | |
| D364_RS21760 | -1 | 24 | -4.294977 | FadR family transcriptional regulator | |
| D364_RS21790 | -1 | 22 | -5.740960 | *molybdopterin-guanine dinucleotide biosynthesis | |
| D364_RS21795 | -1 | 15 | -3.650203 | molybdenum cofactor guanylyltransferase MobA | |
| D364_RS21800 | 0 | 15 | -3.700702 | YihD family protein | |
| D364_RS21805 | 0 | 14 | -3.213785 | serine/threonine protein kinase | |
| D364_RS21810 | 1 | 13 | -3.172505 | thiol:disulfide interchange protein DsbA | |
| D364_RS21815 | 1 | 14 | -2.817161 | acyltransferase | |
| D364_RS21820 | 1 | 14 | -1.668853 | DNA polymerase I | |
| D364_RS21825 | 0 | 16 | -1.529759 | ribosome biogenesis GTP-binding protein | |
| D364_RS21830 | -2 | 14 | -1.753459 | Der GTPase-activating protein YihI | |
| D364_RS21835 | 1 | 19 | -2.122762 | oxygen-independent coproporphyrinogen III | |
| D364_RS27205 | 1 | 21 | -2.172648 | YshB family small membrane protein | |
| D364_RS21840 | 0 | 19 | -2.393813 | nitrogen regulation protein NR(I) | |
| D364_RS21845 | 2 | 24 | -2.888352 | nitrogen regulation protein NR(II) | |
| D364_RS21850 | 2 | 24 | -2.964043 | glutamate--ammonia ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21760 | TCRTETB | 134 | 7e-37 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21815 | PRPHPHLPASEC | 29 | 0.023 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21830 | SECA | 28 | 0.022 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21840 | HTHFIS | 600 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 76 | D364_RS23000 | D364_RS23075 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS23000 | -1 | 15 | -3.552737 | PTS mannose/fructose/sorbose transporter subunit | |
| D364_RS23005 | 0 | 15 | -4.583508 | mannose/fructose/sorbose PTS transporter subunit | |
| D364_RS23010 | -1 | 13 | -2.411083 | PTS sugar transporter subunit IIA | |
| D364_RS23015 | -1 | 13 | -1.587561 | SDR family oxidoreductase | |
| D364_RS23020 | 0 | 15 | -1.225054 | sugar-binding transcriptional regulator | |
| D364_RS23025 | 1 | 15 | -0.785181 | 23S rRNA pseudouridine(2604) synthase RluF | |
| D364_RS23030 | -1 | 14 | -0.429360 | DUF3811 domain-containing protein | |
| D364_RS23035 | 0 | 14 | -0.203047 | ketopantoate/pantoate/pantothenate transporter | |
| D364_RS23040 | 0 | 15 | -1.125235 | lysine-sensitive aspartokinase 3 | |
| D364_RS23045 | 1 | 14 | -3.038610 | glucose-6-phosphate isomerase | |
| D364_RS23050 | 4 | 24 | -4.815353 | N-acetyltransferase | |
| D364_RS23055 | 4 | 25 | -5.823034 | GNAT family N-acetyltransferase | |
| D364_RS23060 | 3 | 21 | -4.552907 | Rid family detoxifying hydrolase | |
| D364_RS23065 | 1 | 16 | -4.391372 | AzlD domain-containing protein | |
| D364_RS23070 | 2 | 17 | -4.102340 | AzlC family ABC transporter permease | |
| D364_RS23075 | 0 | 16 | -3.447081 | serine dehydratase subunit alpha family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23015 | DHBDHDRGNASE | 115 | 4e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23020 | HTHFIS | 28 | 0.045 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23030 | 56KDTSANTIGN | 25 | 0.037 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23045 | BCTERIALGSPD | 32 | 0.007 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23055 | SACTRNSFRASE | 27 | 0.035 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 77 | D364_RS23695 | D364_RS23785 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS23695 | 1 | 23 | -3.383114 | membrane protein FxsA | |
| D364_RS23700 | -1 | 32 | -7.210033 | L-methionine/branched-chain amino acid | |
| D364_RS23710 | -1 | 43 | -11.761631 | co-chaperone GroES | |
| D364_RS23715 | 0 | 43 | -11.543727 | chaperonin GroEL | |
| D364_RS23720 | 2 | 54 | -15.137147 | DUF4156 domain-containing protein | |
| D364_RS23725 | 2 | 43 | -12.640117 | hypothetical protein | |
| D364_RS23730 | 3 | 44 | -12.516782 | HlyD family secretion protein | |
| D364_RS23735 | 4 | 39 | -11.141476 | hypothetical protein | |
| D364_RS23740 | 4 | 35 | -9.771638 | fimbrial protein | |
| D364_RS23745 | 2 | 30 | -8.515201 | fimbrial biogenesis outer membrane usher | |
| D364_RS23750 | 2 | 22 | -6.587229 | molecular chaperone | |
| D364_RS23755 | 0 | 26 | -7.146008 | type 1 fimbrial protein | |
| D364_RS23760 | 1 | 27 | -6.237238 | EF-P beta-lysylation protein EpmB | |
| D364_RS23765 | -1 | 20 | -5.202924 | elongation factor P | |
| D364_RS23770 | -1 | 15 | -1.280141 | entericidin A/B family lipoprotein | |
| D364_RS23775 | 0 | 21 | -1.673038 | lipoprotein toxin entericidin B | |
| D364_RS23780 | 3 | 20 | -0.840272 | quaternary ammonium compound efflux SMR | |
| D364_RS23785 | 2 | 18 | -0.904248 | lipocalin family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23710 | TYPE3OMOPROT | 28 | 0.005 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23735 | RTXTOXIND | 114 | 6e-30 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23750 | PF00577 | 733 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23795 | BCTLIPOCALIN | 250 | 2e-88 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| 78 | D364_RS23900 | D364_RS23945 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS23900 | 2 | 21 | -1.330416 | protease modulator HflC | |
| D364_RS23905 | 3 | 22 | -1.609291 | hypothetical protein | |
| D364_RS23910 | 4 | 21 | -1.261047 | DUF2065 domain-containing protein | |
| D364_RS23915 | 3 | 18 | -0.366369 | adenylosuccinate synthase | |
| D364_RS23925 | 1 | 13 | 1.264390 | nitric oxide-sensing transcriptional repressor | |
| D364_RS23930 | 2 | 13 | 1.251712 | ribonuclease R | |
| D364_RS23935 | 1 | 10 | 1.744821 | 23S rRNA | |
| D364_RS23940 | 1 | 10 | 2.412606 | isovaleryl-CoA dehydrogenase | |
| D364_RS23945 | 2 | 13 | 2.814638 | DUF1471 domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23940 | IGASERPTASE | 33 | 0.008 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23950 | ACRIFLAVINRP | 30 | 0.037 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 79 | D364_RS24320 | D364_RS24380 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS24320 | 2 | 22 | 2.759095 | alpha,alpha-phosphotrehalase | |
| D364_RS24325 | 1 | 22 | 2.559998 | PTS trehalose transporter subunit IIBC | |
| D364_RS24330 | 0 | 20 | 2.388360 | trehalose operon repressor TreR | |
| D364_RS24335 | 0 | 21 | 1.655206 | magnesium-translocating P-type ATPase | |
| D364_RS24340 | -1 | 17 | -3.662188 | 2-iminobutanoate/2-iminopropanoate deaminase | |
| D364_RS24345 | -2 | 16 | -5.067889 | aspartate carbamoyltransferase regulatory | |
| D364_RS24350 | -2 | 26 | -5.836035 | aspartate carbamoyltransferase | |
| D364_RS26580 | 0 | 35 | -7.217465 | pyrBI operon leader peptide | |
| D364_RS24355 | -1 | 35 | -7.727118 | YhcH/YjgK/YiaL family protein | |
| D364_RS24365 | -1 | 30 | -6.899305 | SIS domain-containing protein | |
| D364_RS24370 | -2 | 27 | -6.236331 | PfkB domain-containing protein | |
| D364_RS24375 | -2 | 20 | -4.801667 | amidohydrolase family protein | |
| D364_RS24380 | -1 | 12 | -3.033161 | YfcC family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24375 | UREASE | 37 | 2e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 80 | D364_RS24435 | D364_RS24765 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS24435 | -1 | 18 | 3.628460 | DUF853 domain-containing protein | |
| D364_RS24440 | -1 | 19 | 3.889493 | TIM barrel protein | |
| D364_RS24445 | -1 | 21 | 3.946756 | CoA-acylating methylmalonate-semialdehyde | |
| D364_RS24450 | -1 | 20 | 3.229376 | 5-deoxy-glucuronate isomerase | |
| D364_RS24455 | -1 | 20 | 2.778887 | MurR/RpiR family transcriptional regulator | |
| D364_RS24460 | -1 | 22 | 2.766026 | 5-dehydro-2-deoxygluconokinase | |
| D364_RS24470 | -1 | 23 | 2.363052 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione | |
| D364_RS24475 | -1 | 23 | 1.576849 | Gfo/Idh/MocA family oxidoreductase | |
| D364_RS24480 | -1 | 23 | 1.612458 | sugar phosphate isomerase/epimerase | |
| D364_RS24485 | 0 | 25 | 2.343377 | myo-inosose-2 dehydratase | |
| D364_RS24490 | 0 | 26 | 3.236412 | ABC transporter substrate-binding protein | |
| D364_RS24495 | 2 | 18 | 4.680291 | ABC transporter ATP-binding protein | |
| D364_RS24500 | 2 | 20 | 5.244438 | phosphodiesterase | |
| D364_RS24505 | 1 | 16 | 3.119784 | carbohydrate ABC transporter permease | |
| D364_RS24510 | -1 | 18 | 0.179665 | sugar ABC transporter permease | |
| D364_RS24515 | -1 | 26 | -2.967434 | NAD(P)-dependent alcohol dehydrogenase | |
| D364_RS24520 | -1 | 38 | -5.880365 | carbonic anhydrase | |
| D364_RS24525 | 0 | 39 | -9.936019 | *tyrosine-type recombinase/integrase | |
| D364_RS24535 | 0 | 46 | -12.090454 | nucleotidyl transferase AbiEii/AbiGii toxin | |
| D364_RS26600 | 2 | 59 | -16.296876 | hypothetical protein | |
| D364_RS26605 | 1 | 46 | -10.459951 | hypothetical protein | |
| D364_RS24545 | 1 | 41 | -7.625419 | GNAT family N-acetyltransferase | |
| D364_RS24550 | 0 | 29 | -3.968319 | TraI domain-containing protein | |
| D364_RS24555 | 0 | 27 | -3.260339 | hypothetical protein | |
| D364_RS24560 | 0 | 30 | -5.932562 | DUF1738 domain-containing protein | |
| D364_RS24565 | 1 | 31 | -5.802795 | hypothetical protein | |
| D364_RS24570 | 3 | 36 | -7.948976 | type I restriction-modification system subunit | |
| D364_RS24575 | 4 | 38 | -8.468517 | restriction endonuclease subunit S | |
| D364_RS24580 | 4 | 40 | -9.001476 | type I restriction endonuclease subunit R | |
| D364_RS24585 | 4 | 42 | -9.514539 | HNH endonuclease | |
| D364_RS24590 | 4 | 45 | -11.272867 | restriction endonuclease | |
| D364_RS24595 | 4 | 52 | -13.984406 | polynucleotide adenylyltransferase region | |
| D364_RS24600 | 2 | 65 | -18.685826 | patatin-like phospholipase family protein | |
| D364_RS24605 | 3 | 67 | -19.580650 | hypothetical protein | |
| D364_RS24610 | 4 | 70 | -20.723849 | hypothetical protein | |
| D364_RS24615 | 2 | 66 | -18.785781 | IS3 family transposase | |
| D364_RS26610 | 3 | 62 | -16.529463 | hypothetical protein | |
| D364_RS24620 | 3 | 47 | -12.698248 | PAAR domain-containing protein | |
| D364_RS27685 | 4 | 46 | -9.995140 | glycosyltransferase | |
| D364_RS24625 | 3 | 44 | -8.154795 | polysaccharide pyruvyl transferase family | |
| D364_RS24635 | 2 | 54 | -12.909609 | HNH endonuclease | |
| D364_RS26615 | 3 | 58 | -15.973939 | glycoside hydrolase family 43 protein | |
| D364_RS24640 | 2 | 55 | -15.559476 | glycoside-pentoside-hexuronide (GPH):cation | |
| D364_RS26620 | 2 | 52 | -14.061721 | xylose isomerase | |
| D364_RS26820 | 3 | 35 | -10.898934 | carbohydrate porin | |
| D364_RS24670 | 3 | 27 | -10.476511 | DUF523 and DUF1722 domain-containing protein | |
| D364_RS24675 | 2 | 12 | -5.709069 | DUF3833 domain-containing protein | |
| D364_RS26630 | 2 | 12 | -2.434862 | hypothetical protein | |
| D364_RS24690 | 1 | 15 | -0.819126 | DUF2878 domain-containing protein | |
| D364_RS24695 | 1 | 17 | -0.717543 | cyclopropane-fatty-acyl-phospholipid synthase | |
| D364_RS24700 | -1 | 17 | 0.204474 | DUF1365 domain-containing protein | |
| D364_RS24705 | -2 | 20 | 2.665161 | FAD-dependent oxidoreductase | |
| D364_RS24715 | -1 | 24 | 4.847066 | SDR family NAD(P)-dependent oxidoreductase | |
| D364_RS24720 | 2 | 23 | 6.194179 | nuclear transport factor 2 family protein | |
| D364_RS24725 | 2 | 23 | 6.717984 | MerR family transcriptional regulator | |
| D364_RS24730 | 3 | 24 | 7.506293 | lipocalin family protein | |
| D364_RS24735 | 3 | 24 | 7.045818 | DUF1294 domain-containing protein | |
| D364_RS24740 | 1 | 23 | 6.357061 | CusA/CzcA family heavy metal efflux RND | |
| D364_RS24745 | 1 | 25 | 6.033003 | efflux RND transporter periplasmic adaptor | |
| D364_RS24750 | 1 | 23 | 5.963042 | cation efflux system protein CusF | |
| D364_RS24755 | 1 | 22 | 4.199656 | efflux transporter outer membrane subunit | |
| D364_RS24760 | 0 | 21 | 3.531218 | copper response regulator transcription factor | |
| D364_RS24765 | -1 | 21 | 3.171858 | Cu(+)/Ag(+) sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24490 | MALTOSEBP | 40 | 9e-06 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24495 | PF05272 | 35 | 6e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24560 | SACTRNSFRASE | 33 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24635 | RTXTOXIND | 31 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24755 | DHBDHDRGNASE | 62 | 2e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24770 | BCTLIPOCALIN | 233 | 1e-81 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24780 | ACRIFLAVINRP | 679 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24795 | GPOSANCHOR | 31 | 0.012 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24805 | HTHFIS | 83 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24810 | BORPETOXINA | 29 | 0.027 | Bordetella pertussis toxin A subunit signature. | |
>BORPETOXINA#Bordetella pertussis toxin A subunit signature. | |||||
| 81 | D364_RS24875 | D364_RS24905 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS24875 | 2 | 12 | -0.745124 | PLP-dependent aminotransferase family protein | |
| D364_RS24880 | 2 | 14 | 0.018259 | DUF1127 domain-containing protein | |
| D364_RS24885 | 3 | 15 | 1.169620 | MarR family transcriptional regulator | |
| D364_RS24890 | 3 | 16 | 2.328849 | HlyD family secretion protein | |
| D364_RS24900 | 1 | 18 | 3.081986 | DUF2955 domain-containing protein | |
| D364_RS24905 | 1 | 16 | 3.005155 | DUF3343 domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24935 | RTXTOXIND | 66 | 4e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 82 | D364_RS25040 | D364_RS25110 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS25040 | 2 | 22 | 1.860552 | 5-carboxymethyl-2-hydroxymuconate semialdehyde | |
| D364_RS25045 | 1 | 20 | 0.565693 | fumarylacetoacetate hydrolase family protein | |
| D364_RS25055 | 1 | 15 | 3.203539 | fumarylacetoacetate hydrolase family protein | |
| D364_RS25060 | 1 | 16 | 3.517722 | hypothetical protein | |
| D364_RS25065 | 2 | 16 | 5.631989 | homoprotocatechuate degradation operon regulator | |
| D364_RS25075 | 1 | 18 | 6.222241 | FAD-dependent oxidoreductase | |
| D364_RS26640 | 1 | 16 | 5.899918 | (2Fe-2S)-binding protein | |
| D364_RS25095 | 0 | 14 | 5.488706 | FAD-binding oxidoreductase | |
| D364_RS25105 | 1 | 13 | 3.514258 | 4-hydroxyproline epimerase | |
| D364_RS25110 | 1 | 14 | 3.206077 | AraC family transcriptional regulator |
| 83 | D364_RS25185 | D364_RS25295 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS25185 | -1 | 17 | -3.464935 | sigma-54-dependent transcriptional regulator | |
| D364_RS25190 | 1 | 15 | -4.782409 | PTS sugar transporter subunit IIA | |
| D364_RS25195 | -1 | 15 | -3.514196 | PTS sugar transporter subunit IIB | |
| D364_RS25200 | -2 | 10 | -2.693740 | PTS | |
| D364_RS25205 | -2 | 10 | -2.924702 | PTS system mannose/fructose/sorbose family | |
| D364_RS25210 | -2 | 11 | -3.112531 | SIS domain-containing protein | |
| D364_RS25215 | -2 | 11 | -2.867075 | SIS domain-containing protein | |
| D364_RS25220 | -1 | 10 | -2.439321 | Rpn family recombination-promoting | |
| D364_RS25225 | -1 | 11 | -2.331799 | phosphatidylglycerol--membrane-oligosaccharide | |
| D364_RS25230 | 1 | 13 | -0.708429 | DUF2501 domain-containing protein | |
| D364_RS25235 | 0 | 14 | -1.091787 | DNA replication protein DnaC | |
| D364_RS25240 | -1 | 19 | -1.535825 | primosomal protein DnaT | |
| D364_RS25245 | -1 | 22 | -3.408770 | threonine/serine exporter | |
| D364_RS25250 | -1 | 23 | -3.508514 | threonine/serine exporter ThrE family protein | |
| D364_RS25260 | -2 | 22 | -3.728575 | 4-hydroxybenzoate 3-monooxygenase | |
| D364_RS25265 | -2 | 24 | -4.485025 | helix-turn-helix domain-containing protein | |
| D364_RS25270 | -2 | 23 | -5.450797 | response regulator transcription factor | |
| D364_RS25275 | 0 | 24 | -6.062272 | DNA-binding transcriptional activator BglJ | |
| D364_RS25280 | 1 | 22 | -5.235648 | YbaK/EbsC family protein | |
| D364_RS25285 | 0 | 14 | -3.469575 | PTS cellobiose transporter subunit IIC | |
| D364_RS25290 | 1 | 19 | -2.745434 | siderophore-iron reductase FhuF | |
| D364_RS25295 | 0 | 20 | -3.290208 | GGDEF domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25185 | HTHFIS | 159 | 9e-44 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25220 | FLGFLIH | 35 | 2e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25290 | 2FE2SRDCTASE | 368 | e-132 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| 84 | D364_RS00290 | D364_RS00345 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS00290 | 4 | 12 | 2.930785 | DedA family protein | |
| D364_RS00295 | 4 | 12 | 2.764140 | thiamine ABC transporter ATP-binding protein | |
| D364_RS00300 | 1 | 9 | 0.691351 | thiamine/thiamine pyrophosphate ABC transporter | |
| D364_RS00305 | 0 | 11 | -2.252688 | thiamine ABC transporter substrate binding | |
| D364_RS00310 | 0 | 12 | -2.387563 | HTH-type transcriptional regulator SgrR | |
| D364_RS00315 | -1 | 12 | -4.384139 | glucose uptake inhibitor SgrT | |
| D364_RS00325 | -1 | 10 | -3.902600 | MFS transporter | |
| D364_RS00330 | 0 | 14 | -4.668657 | MFS transporter | |
| D364_RS00335 | 0 | 11 | -4.123491 | LysR family transcriptional regulator | |
| D364_RS00340 | -1 | 12 | -2.169589 | type I 3-dehydroquinate dehydratase | |
| D364_RS00345 | -1 | 12 | -1.841408 | MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00290 | PHPHTRNFRASE | 28 | 0.048 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00310 | NEISSPPORIN | 37 | 2e-04 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00325 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00330 | TCRTETA | 61 | 3e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00345 | TCRTETA | 40 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 85 | D364_RS00745 | D364_RS00805 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS00745 | 6 | 21 | 7.954679 | A24 family peptidase | |
| D364_RS00750 | 6 | 22 | 8.033545 | type II secretion system protein N | |
| D364_RS00755 | 5 | 23 | 7.850772 | type II secretion system protein M | |
| D364_RS00760 | 3 | 23 | 7.067034 | type II secretion system protein GspL | |
| D364_RS00765 | 3 | 24 | 6.851746 | type II secretion system minor pseudopilin GspK | |
| D364_RS00770 | 4 | 23 | 6.961594 | type II secretion system minor pseudopilin GspJ | |
| D364_RS00775 | 0 | 20 | 4.677759 | type II secretion system minor pseudopilin GspI | |
| D364_RS00780 | -2 | 18 | 3.334144 | type II secretion system minor pseudopilin GspH | |
| D364_RS00785 | -2 | 18 | 2.314383 | type II secretion system major pseudopilin GspG | |
| D364_RS00790 | -1 | 15 | 2.122476 | type II secretion system inner membrane protein | |
| D364_RS00795 | -1 | 14 | 1.441440 | type II secretion system ATPase GspE | |
| D364_RS00800 | -1 | 13 | -0.055300 | GspD family T2SS secretin variant PulD | |
| D364_RS00805 | 0 | 14 | -0.585212 | type II secretion system protein GspC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00745 | PREPILNPTASE | 271 | 2e-93 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00770 | BCTERIALGSPG | 33 | 3e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00775 | BCTERIALGSPG | 32 | 2e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00780 | BCTERIALGSPH | 177 | 1e-59 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00785 | BCTERIALGSPG | 243 | 2e-86 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00790 | BCTERIALGSPF | 512 | 0.0 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00800 | BCTERIALGSPD | 839 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS00805 | BCTERIALGSPC | 213 | 7e-71 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| 86 | D364_RS01755 | D364_RS01810 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS01755 | 2 | 11 | 2.736936 | fructokinase | |
| D364_RS01760 | 1 | 12 | 2.221339 | exonuclease subunit SbcC | |
| D364_RS01765 | -2 | 14 | 1.568321 | exonuclease subunit SbcD | |
| D364_RS01770 | -2 | 11 | 1.203021 | phosphate response regulator transcription | |
| D364_RS01775 | -2 | 13 | 1.322824 | phosphate regulon sensor histidine kinase PhoR | |
| D364_RS01780 | -1 | 12 | 1.505171 | branched-chain amino acid transporter carrier | |
| D364_RS01785 | -1 | 14 | 1.852450 | proline-specific permease ProY | |
| D364_RS01790 | -1 | 14 | 1.775089 | maltodextrin glucosidase | |
| D364_RS01795 | -1 | 15 | -0.560443 | LysR family transcriptional regulator | |
| D364_RS01800 | 0 | 13 | -1.180663 | hydrolase | |
| D364_RS01805 | 0 | 13 | -1.569151 | antibiotic biosynthesis monooxygenase | |
| D364_RS01810 | 1 | 15 | -2.336804 | amidohydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01755 | ACETATEKNASE | 34 | 8e-04 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01760 | RTXTOXIND | 37 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01770 | HTHFIS | 96 | 5e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01775 | PF06580 | 31 | 0.006 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01785 | TCRTETA | 29 | 0.030 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01800 | ISCHRISMTASE | 36 | 6e-05 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01810 | UREASE | 30 | 0.033 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 87 | D364_RS01875 | D364_RS01895 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS01875 | 2 | 18 | -0.421322 | protein translocase subunit SecD | |
| D364_RS01880 | 0 | 16 | -0.412211 | protein translocase subunit SecF | |
| D364_RS01885 | -2 | 14 | 1.391974 | VOC family protein | |
| D364_RS01890 | -1 | 13 | 0.759599 | YafY family transcriptional regulator | |
| D364_RS01895 | 0 | 16 | -0.237084 | nucleoside-specific channel-forming protein Tsx |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01875 | SECFTRNLCASE | 70 | 5e-15 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01880 | SECFTRNLCASE | 342 | e-120 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01890 | ARGREPRESSOR | 33 | 6e-04 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS01895 | CHANNELTSX | 537 | 0.0 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| 88 | D364_RS02305 | D364_RS02320 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS02305 | 1 | 13 | -1.824594 | multidrug efflux RND transporter permease | |
| D364_RS02310 | 2 | 12 | -1.110592 | multidrug efflux RND transporter periplasmic | |
| D364_RS02315 | 3 | 12 | -0.812223 | multidrug efflux transporter transcriptional | |
| D364_RS02320 | 3 | 13 | -0.160091 | mechanosensitive channel MscK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02305 | ACRIFLAVINRP | 1365 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02310 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02315 | HTHTETR | 185 | 2e-61 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS02320 | GPOSANCHOR | 47 | 4e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 89 | D364_RS03250 | D364_RS03305 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS03250 | 0 | 18 | 5.086914 | enterobactin transporter EntS | |
| D364_RS03255 | 0 | 18 | 4.637292 | Fe2+-enterobactin ABC transporter | |
| D364_RS03260 | -2 | 18 | 3.823537 | isochorismate synthase EntC | |
| D364_RS03265 | -2 | 19 | 3.108156 | (2,3-dihydroxybenzoyl)adenylate synthase EntE | |
| D364_RS03270 | -1 | 19 | 2.386985 | enterobactin biosynthesis bifunctional | |
| D364_RS03275 | -1 | 17 | 1.308716 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
| D364_RS03280 | 1 | 15 | 1.040220 | proofreading thioesterase EntH | |
| D364_RS03285 | 1 | 14 | 1.720741 | carbon starvation protein CstA | |
| D364_RS03290 | -2 | 14 | 2.405227 | YbdD/YjiX family protein | |
| D364_RS03295 | -2 | 15 | 2.615792 | helix-turn-helix domain-containing protein | |
| D364_RS03300 | -1 | 16 | 3.011214 | type II toxin-antitoxin system RelE/ParE family | |
| D364_RS03305 | -1 | 17 | 3.785731 | 3-oxoacyl-ACP reductase FabG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03250 | TCRTETB | 35 | 4e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03255 | FERRIBNDNGPP | 52 | 6e-10 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03270 | ISCHRISMTASE | 425 | e-153 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03275 | DHBDHDRGNASE | 341 | e-121 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03285 | ACRIFLAVINRP | 31 | 0.014 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS03305 | DHBDHDRGNASE | 135 | 8e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 90 | D364_RS04345 | D364_RS04400 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS04345 | -1 | 14 | 0.473847 | ABC transporter permease | |
| D364_RS04350 | -1 | 14 | 0.626165 | ABC transporter permease | |
| D364_RS04355 | 2 | 14 | -1.389297 | ATP-binding cassette domain-containing protein | |
| D364_RS04360 | 4 | 15 | -2.315895 | secretion protein HlyD | |
| D364_RS04365 | 6 | 15 | -3.181486 | transcriptional regulator CecR | |
| D364_RS04370 | 5 | 14 | -2.504436 | LysR family transcriptional regulator | |
| D364_RS27320 | 5 | 12 | -0.551814 | hypothetical protein | |
| D364_RS04380 | 1 | 10 | 0.116039 | MFS transporter | |
| D364_RS04385 | -1 | 12 | 2.307001 | glucose 1-dehydrogenase | |
| D364_RS04390 | -1 | 14 | 2.168608 | transketolase | |
| D364_RS04395 | -1 | 14 | 2.053670 | transketolase family protein | |
| D364_RS04400 | -1 | 14 | 2.348969 | ATP-dependent RNA helicase RhlE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04345 | ABC2TRNSPORT | 45 | 2e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04355 | PF05272 | 31 | 0.019 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04360 | RTXTOXIND | 76 | 1e-17 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04365 | HTHTETR | 61 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04380 | TCRTETA | 43 | 2e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04385 | DHBDHDRGNASE | 118 | 2e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04400 | SECA | 30 | 0.026 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 91 | D364_RS04625 | D364_RS04665 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS04625 | 0 | 12 | 1.321917 | serine-type D-Ala-D-Ala carboxypeptidase | |
| D364_RS04630 | 1 | 14 | 2.450075 | DNA-binding transcriptional repressor DeoR | |
| D364_RS04635 | 1 | 13 | 2.057238 | undecaprenyl-diphosphate phosphatase | |
| D364_RS04640 | 0 | 13 | 1.782439 | multidrug efflux MFS transporter KdeA | |
| D364_RS04645 | 0 | 15 | 1.338765 | Cof-type HAD-IIB family hydrolase | |
| D364_RS04650 | 0 | 16 | 1.767381 | MFS transporter | |
| D364_RS04655 | -1 | 15 | 0.841306 | TetR family transcriptional regulator | |
| D364_RS04665 | -1 | 15 | 1.071111 | aspartate:alanine antiporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04625 | BLACTAMASEA | 35 | 4e-04 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04640 | TCRTETA | 45 | 3e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04650 | TCRTETB | 34 | 8e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04655 | HTHTETR | 50 | 4e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS04665 | TCRTETA | 32 | 0.005 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 92 | D364_RS05225 | D364_RS05260 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS05225 | 4 | 28 | -4.736856 | DNA helicase IV | |
| D364_RS05230 | 5 | 31 | -5.576412 | methylglyoxal synthase | |
| D364_RS05235 | 3 | 32 | -6.255685 | CoA-binding protein | |
| D364_RS26885 | 3 | 33 | -6.535882 | BapA prefix-like domain-containing protein | |
| D364_RS05250 | 2 | 36 | -7.332589 | TolC family outer membrane protein | |
| D364_RS05255 | 1 | 29 | -6.091482 | type I secretion system permease/ATPase | |
| D364_RS05260 | 2 | 26 | -4.902376 | HlyD family type I secretion periplasmic adaptor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05225 | YERSSTKINASE | 30 | 0.035 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS26885 | ICENUCLEATIN | 42 | 2e-05 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05250 | RTXTOXIND | 29 | 0.046 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS05260 | RTXTOXIND | 263 | 6e-86 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 93 | D364_RS07400 | D364_RS07435 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS07400 | -1 | 11 | 0.574469 | phenylacetic acid degradation operon negative | |
| D364_RS07405 | -1 | 11 | 1.234290 | phenylacetic acid degradation protein PaaY | |
| D364_RS07410 | -1 | 12 | 1.399959 | GFA family protein | |
| D364_RS07415 | -1 | 11 | 1.755964 | FMN-dependent NADH-azoreductase | |
| D364_RS07420 | -1 | 12 | 1.924602 | ATP-dependent RNA helicase HrpA | |
| D364_RS07425 | -1 | 14 | 1.210020 | O-methyltransferase | |
| D364_RS07430 | -2 | 13 | 0.602388 | efflux transporter outer membrane subunit | |
| D364_RS07435 | -2 | 12 | -0.142346 | HlyD family secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07400 | PRTACTNFAMLY | 28 | 0.049 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07415 | LIPPROTEIN48 | 28 | 0.019 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07430 | RTXTOXIND | 34 | 8e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS07435 | RTXTOXIND | 101 | 5e-26 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 94 | D364_RS08825 | D364_RS08855 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS08825 | 1 | 13 | 0.708919 | helix-turn-helix domain-containing protein | |
| D364_RS08830 | 2 | 13 | 1.692326 | glycerate kinase | |
| D364_RS08835 | 1 | 14 | 1.462704 | MFS transporter | |
| D364_RS08840 | 1 | 15 | 1.721607 | SMP-30/gluconolactonase/LRE family protein | |
| D364_RS08845 | 1 | 14 | 1.413382 | MFS transporter | |
| D364_RS08850 | 0 | 12 | 0.763579 | thiolase family protein | |
| D364_RS08855 | -1 | 12 | 0.265302 | 3-oxoacyl-ACP reductase FabG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08825 | DNABINDNGFIS | 29 | 0.012 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08835 | TCRTETB | 41 | 1e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08845 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08855 | DHBDHDRGNASE | 126 | 2e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 95 | D364_RS08985 | D364_RS09005 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS08985 | -2 | 23 | -4.392931 | sigma-54 dependent transcriptional regulator | |
| D364_RS08990 | -2 | 21 | -3.329958 | two-component system sensor histidine kinase | |
| D364_RS08995 | -2 | 21 | -3.158961 | phosphoglycerate transport regulator PgtC | |
| D364_RS09000 | -2 | 20 | -3.536735 | phosphoglycerate transporter PgtP | |
| D364_RS09005 | 0 | 20 | -3.470355 | peptidoglycan-binding protein LysM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS08990 | HTHFIS | 246 | 3e-79 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09000 | FLGMOTORFLIM | 31 | 0.010 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09005 | TCRTETA | 31 | 0.009 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS09010 | INTIMIN | 32 | 5e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 96 | D364_RS10750 | D364_RS10785 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS10750 | -1 | 22 | 3.989275 | GntP family permease | |
| D364_RS10755 | -2 | 17 | 1.642346 | 3-hydroxybutyrate dehydrogenase | |
| D364_RS10760 | -1 | 18 | -3.376349 | LysR family transcriptional regulator | |
| D364_RS10765 | -1 | 24 | -5.083591 | acetolactate decarboxylase | |
| D364_RS10770 | 0 | 30 | -7.013727 | acetolactate synthase AlsS | |
| D364_RS10775 | 2 | 45 | -10.681625 | (S)-acetoin forming diacetyl reductase | |
| D364_RS10780 | 3 | 52 | -12.907890 | GNAT family N-acetyltransferase | |
| D364_RS10785 | 3 | 53 | -13.762344 | multidrug efflux RND transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10750 | ABC2TRNSPORT | 30 | 0.027 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10755 | DHBDHDRGNASE | 115 | 4e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10775 | DHBDHDRGNASE | 124 | 1e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS10785 | ACRIFLAVINRP | 1060 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 97 | D364_RS11195 | D364_RS11235 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS11195 | 0 | 16 | 5.335771 | efflux RND transporter permease subunit | |
| D364_RS11200 | 0 | 15 | 4.555362 | efflux RND transporter periplasmic adaptor | |
| D364_RS11205 | 0 | 15 | 5.096837 | TetR/AcrR family transcriptional regulator | |
| D364_RS11210 | 0 | 14 | 3.274113 | NAD(P)H-binding protein | |
| D364_RS11215 | 0 | 14 | 4.118795 | LysR family transcriptional regulator | |
| D364_RS11220 | 0 | 14 | 3.028651 | ABC transporter substrate-binding protein | |
| D364_RS11225 | 0 | 15 | 0.384105 | iron ABC transporter permease | |
| D364_RS11230 | -1 | 13 | 0.842128 | ABC transporter ATP-binding protein | |
| D364_RS11235 | 1 | 15 | -0.818983 | MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11200 | ACRIFLAVINRP | 440 | e-140 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11205 | RTXTOXIND | 42 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11210 | HTHTETR | 59 | 3e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11215 | NUCEPIMERASE | 37 | 6e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11235 | PF05272 | 28 | 0.029 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11240 | TCRTETA | 66 | 7e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 98 | D364_RS11585 | D364_RS11600 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS11585 | -1 | 13 | 4.776052 | NarK family nitrate/nitrite MFS transporter | |
| D364_RS11590 | 0 | 14 | 5.242307 | nitrate/nitrite two-component system sensor | |
| D364_RS11595 | 0 | 16 | 5.836702 | two-component system response regulator NarL | |
| D364_RS11600 | 0 | 17 | 6.330240 | YchO/YchP family invasin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11585 | TCRTETB | 31 | 0.015 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11590 | PF06580 | 48 | 5e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11595 | HTHFIS | 74 | 8e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11600 | INTIMIN | 230 | 3e-69 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 99 | D364_RS11825 | D364_RS11865 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS11825 | -1 | 14 | 1.514876 | DUF2058 domain-containing protein | |
| D364_RS11835 | -2 | 17 | 1.444605 | RluA family pseudouridine synthase | |
| D364_RS11840 | -3 | 15 | 1.315239 | cold shock domain-containing protein | |
| D364_RS11845 | -2 | 17 | 2.826334 | LysR family transcriptional regulator | |
| D364_RS11850 | -2 | 17 | 2.312247 | substrate-binding domain-containing protein | |
| D364_RS11855 | -1 | 14 | 3.176176 | MFS transporter | |
| D364_RS11860 | -2 | 12 | 1.832253 | LysR family transcriptional regulator | |
| D364_RS11865 | -1 | 14 | 1.523145 | GNAT family N-acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11840 | TRNSINTIMINR | 29 | 0.013 | Translocated intimin receptor (Tir) signature. | |
>TRNSINTIMINR#Translocated intimin receptor (Tir) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11850 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11865 | TCRTETA | 40 | 1e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS11875 | SACTRNSFRASE | 44 | 3e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 100 | D364_RS13130 | D364_RS13205 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS13130 | 2 | 11 | 1.518689 | molecular chaperone | |
| D364_RS13135 | 2 | 12 | 2.441031 | sensor histidine kinase | |
| D364_RS13140 | 2 | 14 | 3.840114 | response regulator transcription factor | |
| D364_RS13145 | 0 | 13 | 4.007831 | small membrane protein | |
| D364_RS13150 | 1 | 14 | 3.323355 | positive transcription regulator | |
| D364_RS13155 | 1 | 12 | 3.135501 | dicarboxylate/amino acid:cation symporter | |
| D364_RS13160 | 0 | 14 | 1.705991 | MdtA/MuxA family multidrug efflux RND | |
| D364_RS13165 | 0 | 13 | 1.894713 | MdtB/MuxB family multidrug efflux RND | |
| D364_RS13170 | 1 | 19 | 3.042537 | multidrug efflux RND transporter permease | |
| D364_RS27045 | 2 | 24 | 3.710510 | MFS transporter | |
| D364_RS13180 | 3 | 25 | 4.192576 | two-component system sensor histidine kinase | |
| D364_RS13185 | 3 | 27 | 5.111754 | two-component system response regulator BaeR | |
| D364_RS13190 | 3 | 27 | 5.409100 | tRNA 5-hydroxyuridine modification protein YegQ | |
| D364_RS13195 | 2 | 27 | 4.568418 | lipid kinase YegS | |
| D364_RS13200 | 0 | 22 | 3.763669 | ABC transporter ATP-binding protein | |
| D364_RS13205 | -1 | 16 | 2.723723 | ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13160 | SHAPEPROTEIN | 48 | 5e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13170 | HTHFIS | 66 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13190 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13195 | ACRIFLAVINRP | 898 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13200 | ACRIFLAVINRP | 890 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13205 | TCRTETB | 123 | 5e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13210 | BCTERIALGSPF | 36 | 2e-04 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13215 | HTHFIS | 77 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13230 | PF05272 | 30 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS13235 | HTHFIS | 29 | 0.027 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 101 | D364_RS15590 | D364_RS15625 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS15590 | 0 | 16 | -0.845908 | fimbrial biogenesis outer membrane usher | |
| D364_RS15595 | 0 | 14 | 0.504546 | fimbrial protein | |
| D364_RS15600 | -1 | 14 | 2.780692 | fimbrial protein | |
| D364_RS15605 | -1 | 13 | 3.324023 | fimbrial biogenesis outer membrane usher | |
| D364_RS15610 | -1 | 12 | 3.352502 | molecular chaperone | |
| D364_RS15615 | -2 | 14 | 4.117859 | fimbrial protein | |
| D364_RS15620 | 0 | 14 | 5.099449 | aldehyde dehydrogenase | |
| D364_RS15625 | 0 | 16 | 4.208650 | sigma-54-dependent Fis family transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15590 | PF00577 | 719 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15595 | PF05616 | 29 | 0.037 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15605 | PF00577 | 739 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS15625 | HTHFIS | 285 | 4e-92 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 102 | D364_RS16940 | D364_RS16980 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS16940 | -2 | 14 | -0.857323 | ABC transporter ATP-binding protein | |
| D364_RS16945 | -1 | 13 | -1.205545 | ABC transporter substrate-binding protein | |
| D364_RS16950 | -2 | 11 | -0.179673 | carbohydrate porin | |
| D364_RS16955 | 0 | 13 | 0.198254 | glycoside hydrolase family 32 protein | |
| D364_RS16960 | 0 | 14 | 0.907023 | MFS transporter | |
| D364_RS16965 | -1 | 12 | -0.347379 | hypothetical protein | |
| D364_RS27580 | 0 | 12 | -0.574137 | LacI family DNA-binding transcriptional | |
| D364_RS16975 | 0 | 12 | 1.110281 | sugar porter family MFS transporter | |
| D364_RS16980 | -2 | 11 | 1.364285 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16945 | BACINVASINB | 36 | 3e-04 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16950 | MALTOSEBP | 30 | 0.025 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16965 | TCRTETA | 29 | 0.036 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16980 | TCRTETB | 55 | 4e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS16985 | DHBDHDRGNASE | 110 | 2e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 103 | D364_RS17150 | D364_RS17185 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS17150 | -1 | 15 | 4.083321 | N-acetyltransferase | |
| D364_RS17155 | -1 | 14 | 4.330985 | (4Fe-4S)-binding protein | |
| D364_RS17160 | -1 | 14 | 3.966980 | hypothetical protein | |
| D364_RS17165 | -1 | 14 | 4.128799 | multidrug transporter subunit MdtN | |
| D364_RS17170 | 0 | 13 | 3.610438 | multidrug efflux transporter permease subunit | |
| D364_RS17175 | 0 | 14 | 2.447893 | MdtP family multidrug efflux transporter outer | |
| D364_RS17180 | -1 | 15 | 0.936132 | DUF1889 family protein | |
| D364_RS17185 | -1 | 13 | 1.425878 | peptide MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17150 | SACTRNSFRASE | 28 | 0.002 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17165 | RTXTOXIND | 68 | 7e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17170 | TYPE3IMSPROT | 29 | 0.049 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17185 | TCRTETB | 31 | 0.010 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 104 | D364_RS17265 | D364_RS17280 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS17265 | 2 | 37 | -10.348462 | response regulator | |
| D364_RS17270 | 4 | 40 | -11.420631 | acid-sensing system DNA-binding response | |
| D364_RS17275 | 5 | 39 | -10.870159 | EmrA/EmrK family multidrug efflux transporter | |
| D364_RS17280 | 6 | 41 | -11.770338 | DHA2 family efflux MFS transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17265 | HTHFIS | 68 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17270 | HTHFIS | 70 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17275 | RTXTOXIND | 64 | 4e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17280 | TCRTETB | 130 | 4e-35 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 105 | D364_RS26290 | D364_RS17420 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS26290 | 2 | 53 | -12.033781 | response regulator | |
| D364_RS17385 | 2 | 55 | -12.793712 | FUSC family protein | |
| D364_RS17390 | 2 | 52 | -11.083261 | response regulator | |
| D364_RS25615 | 2 | 43 | -7.160389 | alpha/beta fold hydrolase | |
| D364_RS17405 | 3 | 43 | -7.896416 | LysR family transcriptional regulator | |
| D364_RS17410 | 2 | 48 | -9.265549 | MFS transporter | |
| D364_RS27130 | 1 | 50 | -10.602150 | tyrosine-type recombinase/integrase | |
| D364_RS17420 | 1 | 52 | -10.723839 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17385 | HTHFIS | 48 | 9e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17405 | HTHFIS | 42 | 9e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17425 | TCRTETB | 126 | 4e-34 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS17435 | 56KDTSANTIGN | 33 | 0.002 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| 106 | D364_RS19245 | D364_RS19260 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS19245 | 0 | 17 | -3.712147 | DNA-binding transcriptional regulator Fis | |
| D364_RS19250 | 0 | 17 | -3.333328 | acrEF/envCD operon transcriptional regulator | |
| D364_RS19255 | 1 | 18 | -2.960039 | efflux RND transporter periplasmic adaptor | |
| D364_RS19260 | 1 | 19 | -3.145978 | membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19245 | DNABINDNGFIS | 157 | 3e-54 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19250 | HTHTETR | 119 | 1e-35 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19255 | RTXTOXIND | 37 | 1e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19265 | PF06291 | 27 | 0.005 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| 107 | D364_RS19495 | D364_RS19515 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS19495 | 5 | 49 | -6.279207 | A24 family peptidase | |
| D364_RS19500 | 4 | 50 | -6.513197 | bacterioferritin | |
| D364_RS19505 | 6 | 56 | -6.947900 | bacterioferritin-associated ferredoxin | |
| D364_RS19510 | 7 | 60 | -5.953506 | elongation factor Tu | |
| D364_RS19515 | 7 | 58 | -5.165499 | elongation factor G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19500 | PREPILNPTASE | 122 | 3e-37 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19505 | HELNAPAPROT | 37 | 9e-06 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19515 | TCRTETOQM | 80 | 4e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19520 | TCRTETOQM | 613 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 108 | D364_RS19700 | D364_RS19725 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS19700 | 1 | 18 | 1.188131 | cell division protein DamX | |
| D364_RS19705 | 2 | 20 | 2.156821 | 3-dehydroquinate synthase | |
| D364_RS19710 | 3 | 22 | 3.668165 | shikimate kinase AroK | |
| D364_RS19715 | 0 | 15 | 3.117640 | DNA uptake porin HofQ | |
| D364_RS26400 | -2 | 15 | 2.481771 | DUF2531 family protein | |
| D364_RS19720 | -2 | 11 | 1.648890 | hypothetical protein | |
| D364_RS19725 | -2 | 11 | 1.027275 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19700 | IGASERPTASE | 36 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19710 | CARBMTKINASE | 31 | 0.002 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19715 | TYPE3OMGPROT | 226 | 3e-70 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19725 | PYOCINKILLER | 34 | 2e-04 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 109 | D364_RS19940 | D364_RS19975 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS19940 | -1 | 12 | 1.064345 | N-acetyltransferase | |
| D364_RS19945 | 0 | 12 | 0.834240 | gamma-glutamyltransferase | |
| D364_RS19950 | -2 | 12 | 0.831352 | DUF2756 family protein | |
| D364_RS19955 | -3 | 14 | 0.366204 | glycerophosphodiester phosphodiesterase | |
| D364_RS19960 | -3 | 12 | -0.004733 | sn-glycerol-3-phosphate import ATP-binding | |
| D364_RS19965 | -3 | 13 | -1.060750 | sn-glycerol-3-phosphate ABC transporter permease | |
| D364_RS19970 | -1 | 15 | -1.079440 | sn-glycerol-3-phosphate ABC transporter permease | |
| D364_RS19975 | -2 | 15 | -0.260495 | sn-glycerol-3-phosphate ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19945 | SACTRNSFRASE | 37 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19950 | NAFLGMOTY | 33 | 0.003 | Sodium-type flagellar protein MotY precursor signature. | |
>NAFLGMOTY#Sodium-type flagellar protein MotY precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19960 | PF04619 | 28 | 0.018 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19965 | PF05272 | 29 | 0.036 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS19980 | MALTOSEBP | 38 | 6e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 110 | D364_RS20110 | D364_RS20145 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS20110 | 4 | 15 | 2.778726 | MFS transporter | |
| D364_RS20115 | 2 | 13 | 3.238159 | AI-2E family transporter | |
| D364_RS20120 | 0 | 14 | 2.387589 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol | |
| D364_RS20125 | -2 | 17 | 2.249876 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol | |
| D364_RS20130 | -2 | 16 | 2.271434 | lipid IV(A) | |
| D364_RS20135 | -2 | 16 | 1.524127 | 4-deoxy-4-formamido-L-arabinose- | |
| D364_RS20140 | -1 | 16 | 2.083651 | bifunctional UDP-4-amino-4-deoxy-L-arabinose | |
| D364_RS20145 | -2 | 15 | 2.330692 | undecaprenyl-phosphate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20115 | TCRTETA | 49 | 2e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20130 | BCTERIALGSPC | 32 | 2e-04 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20145 | NUCEPIMERASE | 113 | 2e-29 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20150 | ACRIFLAVINRP | 31 | 0.011 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 111 | D364_RS20450 | D364_RS20480 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS20450 | -2 | 12 | 0.044649 | kdo(2)-lipid A phosphoethanolamine | |
| D364_RS20455 | -2 | 10 | 0.749833 | MFS transporter | |
| D364_RS20460 | -1 | 9 | 1.666448 | hypothetical protein | |
| D364_RS20465 | -1 | 10 | 2.241797 | DNA-3-methyladenine glycosylase I | |
| D364_RS20470 | -1 | 12 | 2.249112 | N-acetyltransferase | |
| D364_RS20475 | -1 | 15 | 2.523303 | molybdopterin guanine dinucleotide-containing | |
| D364_RS20480 | -2 | 13 | 2.161462 | OmpA family lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20455 | PF06580 | 29 | 0.049 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20460 | TCRTETA | 41 | 4e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20475 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20485 | OMPADOMAIN | 118 | 6e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 112 | D364_RS20840 | D364_RS20875 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS20840 | 0 | 17 | -2.921715 | bifunctional phosphopantothenoylcysteine | |
| D364_RS20845 | 0 | 23 | -5.676780 | dUTP diphosphatase | |
| D364_RS20850 | 1 | 29 | -7.714392 | nucleoid occlusion factor SlmA | |
| D364_RS20855 | 1 | 33 | -8.770358 | orotate phosphoribosyltransferase | |
| D364_RS20860 | 2 | 45 | -12.458765 | ribonuclease PH | |
| D364_RS20865 | 2 | 43 | -12.461356 | ABC transporter permease | |
| D364_RS20870 | 1 | 43 | -11.959950 | ABC transporter ATP-binding protein | |
| D364_RS20875 | 2 | 39 | -10.328235 | HlyD family efflux transporter periplasmic |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20840 | UREASE | 30 | 0.020 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20850 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20865 | ABC2TRNSPORT | 45 | 2e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS20875 | RTXTOXIND | 58 | 2e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 113 | D364_RS21125 | D364_RS21175 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS21125 | 2 | 19 | 1.406858 | MFS transporter | |
| D364_RS21130 | 0 | 16 | 1.377785 | TetR/AcrR family transcriptional regulator | |
| D364_RS21135 | -2 | 16 | 2.867023 | GNAT family N-acetyltransferase | |
| D364_RS21145 | -2 | 18 | 3.502250 | hypothetical protein | |
| D364_RS27635 | -1 | 20 | 4.208955 | hypothetical protein | |
| D364_RS27640 | -1 | 21 | 4.537983 | multidrug efflux RND transporter periplasmic | |
| D364_RS21165 | -1 | 22 | 5.026285 | multidrug efflux RND transporter permease | |
| D364_RS21170 | -1 | 22 | 4.776610 | multidrug efflux RND transporter outer membrane | |
| D364_RS21175 | 1 | 20 | 4.183612 | multidrug effflux MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21130 | TCRTETB | 138 | 4e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21135 | HTHTETR | 72 | 7e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21145 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21165 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21170 | ACRIFLAVINRP | 1146 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21180 | TCRTETA | 67 | 2e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 114 | D364_RS21300 | D364_RS21330 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS21300 | -1 | 12 | -1.198166 | purine ribonucleoside efflux pump NepI | |
| D364_RS21305 | -1 | 12 | 0.132065 | DNA-binding transcriptional regulator | |
| D364_RS21310 | -1 | 12 | 1.607499 | DUF1198 family protein | |
| D364_RS21315 | -1 | 13 | 1.909999 | hexose-6-phosphate:phosphate antiporter | |
| D364_RS21320 | -1 | 13 | 2.403473 | MFS transporter | |
| D364_RS21325 | 0 | 13 | 3.195788 | signal transduction histidine-protein | |
| D364_RS21330 | 0 | 13 | 2.522998 | transcriptional regulator UhpA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21300 | TCRTETA | 32 | 0.003 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21320 | TCRTETB | 35 | 7e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21325 | TCRTETB | 37 | 1e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21335 | HTHFIS | 64 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 115 | D364_RS26470 | D364_RS21550 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS26470 | -2 | 11 | 0.411491 | membrane protein insertase YidC | |
| D364_RS21520 | -1 | 11 | 0.645419 | tRNA uridine-5-carboxymethylaminomethyl(34) | |
| D364_RS21525 | 0 | 13 | 0.839221 | GNAT family N-acetyltransferase | |
| D364_RS21530 | 2 | 12 | 1.713018 | MFS transporter | |
| D364_RS21535 | 0 | 11 | 0.747597 | HTH-type transcriptional regulator YidZ | |
| D364_RS21540 | 0 | 10 | 0.170106 | phosphopantetheinyl transferase | |
| D364_RS21545 | 0 | 12 | -0.829568 | NAD(P)H-dependent oxidoreductase | |
| D364_RS21550 | -2 | 13 | -1.287091 | NCS2 family permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21525 | 60KDINNERMP | 814 | 0.0 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21535 | SACTRNSFRASE | 38 | 5e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21540 | TCRTETA | 58 | 2e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS21560 | TYPE3IMSPROT | 31 | 0.013 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 116 | D364_RS23015 | D364_RS23055 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS23015 | -1 | 13 | -1.587561 | SDR family oxidoreductase | |
| D364_RS23020 | 0 | 15 | -1.225054 | sugar-binding transcriptional regulator | |
| D364_RS23025 | 1 | 15 | -0.785181 | 23S rRNA pseudouridine(2604) synthase RluF | |
| D364_RS23030 | -1 | 14 | -0.429360 | DUF3811 domain-containing protein | |
| D364_RS23035 | 0 | 14 | -0.203047 | ketopantoate/pantoate/pantothenate transporter | |
| D364_RS23040 | 0 | 15 | -1.125235 | lysine-sensitive aspartokinase 3 | |
| D364_RS23045 | 1 | 14 | -3.038610 | glucose-6-phosphate isomerase | |
| D364_RS23050 | 4 | 24 | -4.815353 | N-acetyltransferase | |
| D364_RS23055 | 4 | 25 | -5.823034 | GNAT family N-acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23015 | DHBDHDRGNASE | 115 | 4e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23020 | HTHFIS | 28 | 0.045 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23030 | 56KDTSANTIGN | 25 | 0.037 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23045 | BCTERIALGSPD | 32 | 0.007 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23055 | SACTRNSFRASE | 27 | 0.035 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 117 | D364_RS23440 | D364_RS23500 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS23440 | -2 | 15 | -0.421871 | response regulator transcription factor | |
| D364_RS23445 | -1 | 14 | 0.351178 | type IV toxin-antitoxin system AbiEi family | |
| D364_RS23450 | 0 | 13 | 3.315979 | nucleotidyl transferase AbiEii/AbiGii toxin | |
| D364_RS23455 | 2 | 18 | 4.812797 | carbohydrate kinase family protein | |
| D364_RS23460 | 1 | 19 | 4.513066 | ABC transporter substrate-binding protein | |
| D364_RS23465 | 3 | 19 | 4.858330 | ribose ABC transporter permease | |
| D364_RS23470 | 3 | 18 | 5.132149 | sugar ABC transporter ATP-binding protein | |
| D364_RS23475 | 3 | 18 | 5.083084 | hybrid sensor histidine kinase/response | |
| D364_RS23480 | 2 | 18 | 3.901547 | membrane protein | |
| D364_RS23485 | 1 | 21 | 3.849929 | phosphonate metabolism protein PhnP | |
| D364_RS23490 | 0 | 22 | 4.309723 | ribose 1,5-bisphosphokinase | |
| D364_RS23495 | 1 | 22 | 4.462277 | alpha-D-ribose 1-methylphosphonate | |
| D364_RS23500 | -1 | 22 | 4.594852 | phosphonate C-P lyase system protein PhnL |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23440 | HTHFIS | 90 | 1e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23460 | SUBTILISIN | 29 | 0.019 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23465 | PF00577 | 29 | 0.040 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23475 | HTHFIS | 56 | 4e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23480 | RTXTOXIND | 30 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS23500 | PF05272 | 28 | 0.027 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 118 | D364_RS24730 | D364_RS24790 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS24730 | 3 | 24 | 7.506293 | lipocalin family protein | |
| D364_RS24735 | 3 | 24 | 7.045818 | DUF1294 domain-containing protein | |
| D364_RS24740 | 1 | 23 | 6.357061 | CusA/CzcA family heavy metal efflux RND | |
| D364_RS24745 | 1 | 25 | 6.033003 | efflux RND transporter periplasmic adaptor | |
| D364_RS24750 | 1 | 23 | 5.963042 | cation efflux system protein CusF | |
| D364_RS24755 | 1 | 22 | 4.199656 | efflux transporter outer membrane subunit | |
| D364_RS24760 | 0 | 21 | 3.531218 | copper response regulator transcription factor | |
| D364_RS24765 | -1 | 21 | 3.171858 | Cu(+)/Ag(+) sensor histidine kinase | |
| D364_RS24770 | -1 | 20 | 2.726946 | DUF1778 domain-containing protein | |
| D364_RS24775 | -1 | 20 | 2.457795 | GNAT family N-acetyltransferase | |
| D364_RS24780 | 0 | 19 | 2.137869 | cupin domain-containing protein | |
| D364_RS24785 | 0 | 16 | 1.083715 | *hypothetical protein | |
| D364_RS24790 | -1 | 15 | -0.729873 | ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24770 | BCTLIPOCALIN | 233 | 1e-81 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24780 | ACRIFLAVINRP | 679 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24795 | GPOSANCHOR | 31 | 0.012 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24805 | HTHFIS | 83 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24810 | BORPETOXINA | 29 | 0.027 | Bordetella pertussis toxin A subunit signature. | |
>BORPETOXINA#Bordetella pertussis toxin A subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS24860 | ABC2TRNSPORT | 48 | 2e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 119 | D364_RS25445 | D364_RS25470 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| D364_RS25445 | -1 | 14 | -0.459978 | MDR efflux pump AcrAB transcriptional activator | |
| D364_RS25450 | -2 | 14 | -0.659424 | protein CreA | |
| D364_RS25455 | two-component system response regulator CreB | ||||
| D364_RS25460 | two-component system sensor histidine kinase | ||||
| D364_RS25465 | cell envelope integrity protein CreD | ||||
| D364_RS25470 | two-component system response regulator ArcA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25445 | DPTHRIATOXIN | 29 | 0.020 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25455 | HTHFIS | 98 | 1e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25460 | PF06580 | 38 | 9e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| D364_RS25470 | HTHFIS | 83 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||