S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
1 | PSPTO_0001 | PSPTO_0057 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0001 | 1 | 16 | -3.944510 | chromosomal replication initiator protein DnaA | |
PSPTO_0002 | 2 | 16 | -4.443724 | DNA polymerase III, beta subunit | |
PSPTO_0003 | 2 | 16 | -4.284141 | DNA replication and repair protein RecF | |
PSPTO_0004 | 2 | 15 | -4.075200 | DNA gyrase, subunit B | |
PSPTO_0005 | 3 | 22 | -4.886210 | type I restriction-modification system, M | |
PSPTO_0006 | 3 | 22 | -4.619736 | type I restriction-modification system, S | |
PSPTO_0007 | 3 | 20 | -3.962089 | protein of unknown function | |
PSPTO_0008 | 2 | 19 | -3.721263 | type I site-specific deoxyribonuclease, HsdR | |
PSPTO_0009 | 2 | 23 | -3.252987 | ISPsy3, transposase | |
PSPTO_5633 | 4 | 28 | -4.124597 | conserved protein of unknown function | |
PSPTO_0011 | 3 | 24 | -2.815624 | conserved protein of unknown function | |
PSPTO_0012 | 2 | 22 | -4.064847 | protein of unknown function | |
PSPTO_0013 | 1 | 21 | -3.619895 | protein of unknown function | |
PSPTO_0014 | 0 | 19 | -3.179281 | hypothetical protein | |
PSPTO_0015 | 0 | 20 | -3.790906 | protein of unknown function | |
PSPTO_0016 | 3 | 26 | -5.153084 | protein of unknown function | |
PSPTO_0017 | 3 | 25 | -4.888888 | helicase/SNF2 family domain protein | |
PSPTO_0018 | 4 | 29 | -4.686763 | ISPsy4, transposition helper protein | |
PSPTO_0019 | 5 | 31 | -5.050753 | ISPsy4, transposase | |
PSPTO_0020 | 5 | 36 | -5.815558 | protein of unknown function | |
PSPTO_0021 | 6 | 37 | -5.985125 | protein of unknown function | |
PSPTO_0022 | 4 | 37 | -5.044120 | DNA-binding protein | |
PSPTO_0023 | 4 | 40 | -8.310010 | hypothetical protein | |
PSPTO_0024 | 5 | 42 | -8.592956 | protein of unknown function | |
PSPTO_0025 | 4 | 43 | -8.050567 | hydrolase, haloacid dehalogenase-like family | |
PSPTO_0026 | 3 | 43 | -8.439773 | hypothetical protein | |
PSPTO_0027 | 3 | 44 | -9.012950 | hypothetical protein | |
PSPTO_0028 | 4 | 46 | -9.500582 | transposase | |
PSPTO_0029 | 3 | 44 | -8.488937 | transposition helper protein | |
PSPTO_0030 | 1 | 37 | -7.399481 | hypothetical protein | |
PSPTO_0031 | 1 | 35 | -8.078446 | Ser/Thr protein phosphatase family protein | |
PSPTO_0032 | 2 | 23 | -7.102940 | conserved hypothetical protein | |
PSPTO_0033 | 1 | 23 | -6.608842 | ParB family protein | |
PSPTO_0034 | 0 | 20 | -5.740056 | recombinase, putative | |
PSPTO_0035 | 0 | 18 | -5.442305 | ISPsy5, transposase | |
PSPTO_0036 | 1 | 19 | -5.828833 | ISPsy5, Orf1 | |
PSPTO_0037 | 1 | 20 | -5.961289 | helicase domain protein | |
PSPTO_0038 | 1 | 30 | -5.797132 | conserved domain protein | |
PSPTO_0039 | 2 | 30 | -5.739759 | ISPsy5, transposase | |
PSPTO_0040 | 4 | 39 | -6.076539 | ISPsy5, Orf1 | |
PSPTO_0041 | 2 | 38 | -5.755537 | hypothetical protein | |
PSPTO_0043 | 3 | 37 | -6.316446 | cytidine/deoxycytidylate deaminase family | |
PSPTO_0044 | 2 | 37 | -6.301730 | type III effector HopK1 | |
PSPTO_0045 | 2 | 35 | -7.480666 | protein of unknown function | |
PSPTO_0046 | 2 | 35 | -7.410950 | conserved protein of unknown function | |
PSPTO_0047 | 2 | 33 | -7.925695 | UvrD/REP helicase family protein | |
PSPTO_0048 | 2 | 31 | -7.623516 | protein of unknown function | |
PSPTO_0049 | 1 | 32 | -6.806462 | conserved protein of unknown function | |
PSPTO_0050 | 1 | 29 | -5.455748 | conserved hypothetical protein | |
PSPTO_0051 | 1 | 28 | -3.602752 | conserved protein of unknown function | |
PSPTO_0052 | 1 | 29 | -3.984570 | protein of unknown function | |
PSPTO_0053 | 1 | 29 | -3.314232 | protein of unknown function | |
PSPTO_0054 | 2 | 28 | -3.419108 | hypothetical protein | |
PSPTO_0055 | 2 | 26 | -3.149774 | ISPsy4, transposase | |
PSPTO_0056 | 1 | 19 | -2.768686 | ISPsy4, transposition helper protein | |
PSPTO_0057 | 2 | 19 | -2.727982 | transposition helper protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0001 | FLGHOOKFLIK | 30 | 0.020 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0017 | FLGHOOKAP1 | 30 | 0.042 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0019 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0044 | PRTACTNFAMLY | 31 | 0.009 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0054 | cdtoxinb | 29 | 0.013 | Cytolethal distending toxin B signature. | |
>cdtoxinb#Cytolethal distending toxin B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0055 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
2 | PSPTO_0126 | PSPTO_0137 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0126 | 2 | 10 | 2.241555 | alginate biosynthesis protein AlgZ/FimS | |
PSPTO_0127 | 2 | 12 | 2.793095 | alginate biosynthesis regulatory protein AlgR | |
PSPTO_0128 | 4 | 12 | 3.042246 | porphobilinogen deaminase | |
PSPTO_0129 | 4 | 15 | 2.179063 | uroporphyrinogen-III synthetase | |
PSPTO_0130 | 4 | 14 | 2.053529 | uroporphyrin-III C-methyltransferase, putative | |
PSPTO_0131 | 7 | 16 | 1.477502 | hemY protein, putative | |
PSPTO_0132 | 8 | 21 | 0.334722 | DsbB family protein | |
PSPTO_0133 | 7 | 14 | 1.828268 | protein of unknown function | |
PSPTO_0134 | 6 | 12 | 2.146538 | transcriptional regulator AlgQ | |
PSPTO_0135 | 6 | 11 | 2.736323 | peptidyl-prolyl cis-trans isomerase, FKBP-type | |
PSPTO_0136 | 6 | 11 | 3.387954 | alginate regulatory protein AlgR3 | |
PSPTO_0137 | 2 | 13 | 3.115561 | conserved protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0126 | PF06580 | 186 | 4e-58 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0127 | HTHFIS | 84 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0135 | INFPOTNTIATR | 126 | 4e-38 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0136 | IGASERPTASE | 46 | 1e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
3 | PSPTO_0189 | PSPTO_0203 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0189 | 0 | 22 | -3.655863 | nitrilase, putative | |
PSPTO_0192 | 3 | 33 | -7.302602 | recombinase, putative | |
PSPTO_0193 | 4 | 36 | -8.603601 | ISPsy4, transposition helper protein | |
PSPTO_0194 | 6 | 48 | -11.618633 | ISPsy4, transposase | |
PSPTO_0196 | 7 | 59 | -14.544759 | ISPsy5, transposase | |
PSPTO_0197 | 9 | 68 | -17.049593 | ISPsy5, Orf1 | |
PSPTO_0200 | 8 | 66 | -16.376220 | conserved protein of unknown function | |
PSPTO_0201 | 7 | 56 | -13.989218 | conserved domain protein | |
PSPTO_0202 | 5 | 44 | -9.996363 | membrane protein, putative | |
PSPTO_0203 | 2 | 30 | -6.169188 | cysteine synthase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0194 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0202 | TCRTETB | 29 | 0.039 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
4 | PSPTO_0249 | PSPTO_0254 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0249 | 0 | 19 | 3.419701 | peptide ABC transporter, periplasmic | |
PSPTO_0250 | 0 | 17 | 3.495830 | peptide ABC transporter, permease protein | |
PSPTO_0251 | 0 | 19 | 3.669866 | peptide ABC transporter, permease protein | |
PSPTO_0252 | 0 | 16 | 3.756297 | peptide ABC transporter, ATP-binding protein | |
PSPTO_0253 | 0 | 14 | 3.624251 | conserved hypothetical protein | |
PSPTO_0254 | -1 | 15 | 3.437068 | pyridine nucleotide-disulfide oxidoreductase |
5 | PSPTO_0266 | PSPTO_0280 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0266 | 2 | 14 | 1.700599 | peptide ABC transporter, permease protein | |
PSPTO_0267 | 2 | 11 | 1.891426 | bacterial extracellular solute-binding protein, | |
PSPTO_0268 | 0 | 13 | 2.294228 | TonB system transport protein, putative | |
PSPTO_0269 | -1 | 11 | 2.806459 | biopolymer transport protein ExbD, putative | |
PSPTO_0270 | -1 | 13 | 1.715803 | biopolymer transport protein ExbB, putative | |
PSPTO_0271 | -1 | 16 | 0.941243 | tonB protein, putative | |
PSPTO_0272 | -1 | 19 | -0.822299 | cysteine desulfurase | |
PSPTO_0273 | 1 | 19 | -2.395449 | transcriptional regulator, AsnC family | |
PSPTO_0274 | 1 | 22 | -3.245614 | hypothetical protein | |
PSPTO_0275 | -1 | 23 | -3.544765 | DNA-binding protein | |
PSPTO_0276 | 0 | 21 | -3.985036 | hydrolase, haloacid dehalogenase-like family | |
PSPTO_0277 | 2 | 24 | -3.733695 | protein of unknown function | |
PSPTO_0278 | 3 | 22 | -3.299164 | conserved protein of unknown function | |
PSPTO_0279 | 3 | 22 | -2.984362 | conserved protein of unknown function | |
PSPTO_0280 | 3 | 29 | -3.698359 | methionine aminopeptidase, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0271 | PF03544 | 75 | 4e-18 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0277 | ECOLIPORIN | 27 | 0.040 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. |
6 | PSPTO_0434 | PSPTO_0449 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0434 | -1 | 15 | 3.131326 | thiazole biosynthesis protein ThiG | |
PSPTO_0435 | 0 | 14 | 2.946308 | methyltransferase, putative | |
PSPTO_0436 | -1 | 13 | 2.814280 | conserved hypothetical protein | |
PSPTO_0437 | 0 | 12 | 3.649737 | dihydrofolate reductase | |
PSPTO_0438 | -1 | 13 | 3.322371 | conserved hypothetical protein | |
PSPTO_0439 | -1 | 13 | 2.566405 | conserved protein of unknown function | |
PSPTO_0440 | 0 | 17 | 2.474261 | regulatory protein BetI | |
PSPTO_0441 | 0 | 16 | 2.665870 | betaine aldehyde dehydrogenase BADH | |
PSPTO_0442 | 1 | 12 | 3.151080 | hypothetical protein | |
PSPTO_0443 | 1 | 12 | 3.084463 | choline dehydrogenase | |
PSPTO_0444 | 0 | 10 | 2.405984 | RNA polymerase sigma-70 family protein | |
PSPTO_0445 | -1 | 10 | 0.556142 | regulatory protein, putative | |
PSPTO_0446 | -1 | 12 | -0.870674 | membrane protein, putative | |
PSPTO_0447 | 1 | 11 | -1.849781 | hypothetical protein | |
PSPTO_0448 | 1 | 13 | -2.062117 | glutathione S-transferase, putative | |
PSPTO_0449 | 2 | 22 | -3.122005 | ISPsy8, transposase OrfA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0439 | PRTACTNFAMLY | 32 | 0.005 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0440 | HTHTETR | 50 | 4e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
7 | PSPTO_0484 | PSPTO_0501 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0484 | 1 | 13 | 3.026702 | conserved protein of unknown function | |
PSPTO_0485 | 1 | 16 | 3.168596 | transcriptional repressor, LacI family | |
PSPTO_0486 | 1 | 15 | 2.743903 | ABC transporter, periplasmic substrate-binding | |
PSPTO_0487 | 2 | 16 | 2.664716 | ABC transporter, permease protein | |
PSPTO_0488 | 2 | 16 | 2.314428 | ABC transporter, permease protein | |
PSPTO_0489 | 1 | 14 | 2.051733 | ABC transporter, ATP-binding protein | |
PSPTO_0490 | 1 | 15 | 2.171661 | Ser/Thr protein phosphatase family protein | |
PSPTO_0491 | 0 | 14 | 2.573481 | Tat (twin-arginine translocation) pathway signal | |
PSPTO_0492 | 2 | 12 | 3.047089 | molybdate transport regulator ModE, putative | |
PSPTO_0493 | 2 | 13 | 3.054403 | competence protein ComF, putative | |
PSPTO_0494 | 1 | 13 | 2.911034 | biotin synthetase | |
PSPTO_0495 | 0 | 12 | 2.534018 | 8-amino-7-oxononanoate synthase | |
PSPTO_0496 | -2 | 12 | -0.221167 | bioH protein | |
PSPTO_0497 | -1 | 18 | -2.356752 | biotin synthesis protein BioC | |
PSPTO_0498 | 0 | 21 | -4.670665 | dethiobiotin synthetase | |
PSPTO_0499 | -1 | 18 | -4.325597 | conserved protein of unknown function | |
PSPTO_0500 | -1 | 13 | -3.277092 | acyl-CoA dehydrogenase family protein | |
PSPTO_0501 | -1 | 20 | -4.899132 | type III effector HopU1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0501 | BINARYTOXINA | 33 | 0.001 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. |
8 | PSPTO_0522 | PSPTO_0538 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0522 | 1 | 29 | -4.098472 | conserved domain protein | |
PSPTO_0523 | 2 | 33 | -5.411879 | Fic family protein | |
PSPTO_0524 | 3 | 39 | -6.614598 | peptidase, M20/M25/M40 family | |
PSPTO_0525 | 5 | 47 | -7.349812 | lipoprotein, putative | |
PSPTO_0526 | 5 | 48 | -7.288629 | hypothetical protein | |
PSPTO_0527 | 5 | 49 | -7.324305 | hypothetical protein | |
PSPTO_0528 | 4 | 41 | -6.970965 | hypothetical protein | |
PSPTO_0529 | 4 | 34 | -5.706104 | protein of unknown function | |
PSPTO_0530 | 1 | 18 | -3.137164 | conserved protein of unknown function | |
PSPTO_0531 | 0 | 12 | -2.735538 | type IV secretion system protein, putative | |
PSPTO_0532 | 1 | 12 | -1.692954 | lipoprotein, putative | |
PSPTO_0534 | 1 | 13 | -1.595987 | ISPssy, transposase | |
PSPTO_0535 | 1 | 14 | -0.476944 | site-specific recombinase, phage integrase | |
PSPTO_0536 | 2 | 16 | 0.459776 | *sensory box/GGDEF domain/EAL domain protein | |
PSPTO_0537 | 2 | 15 | 0.738937 | RNA polymerase sigma-70 factor | |
PSPTO_0538 | 3 | 12 | 1.774882 | DNA primase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0537 | IGASERPTASE | 32 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
9 | PSPTO_0580 | PSPTO_0588 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0580 | 1 | 27 | -3.306855 | tail tape measure protein | |
PSPTO_0581 | 3 | 34 | -4.656533 | DNA circulation protein, putative | |
PSPTO_0582 | 3 | 36 | -6.300207 | protein of unknown function | |
PSPTO_0583 | 3 | 38 | -6.723306 | protein of unknown function | |
PSPTO_0584 | 3 | 40 | -6.863515 | transcriptional regulator, Sir2 family | |
PSPTO_0585 | 2 | 34 | -6.006939 | hypothetical protein | |
PSPTO_0586 | 2 | 31 | -5.269106 | site-specific recombinase, phage integrase | |
PSPTO_0587 | 0 | 26 | -4.924396 | site-specific recombinase, phage integrase | |
PSPTO_0588 | -2 | 17 | -3.742444 | type III effector HopH1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0580 | ABC2TRNSPORT | 31 | 0.012 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0581 | PF07132 | 37 | 2e-04 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) |
10 | PSPTO_0702 | PSPTO_0717 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0702 | -2 | 15 | -4.054617 | conserved hypothetical protein | |
PSPTO_0703 | 0 | 15 | -4.631832 | glutathione S-transferase family protein | |
PSPTO_0704 | 0 | 18 | -5.508772 | O-antigen ABC transporter, permease protein, | |
PSPTO_0705 | 1 | 18 | -5.047622 | O-antigen ABC transporter, ATP-binding protein | |
PSPTO_0706 | 0 | 16 | -4.614596 | lipopolysaccharide biosynthesis protein, | |
PSPTO_0707 | 1 | 18 | -4.929745 | hypothetical protein | |
PSPTO_0708 | 0 | 18 | -4.935573 | HAD-superfamily hydrolase | |
PSPTO_0709 | -1 | 17 | -4.369069 | hypothetical protein | |
PSPTO_0710 | 0 | 18 | -3.946444 | conserved domain protein | |
PSPTO_0711 | -1 | 20 | -4.177884 | hypothetical protein | |
PSPTO_0712 | -1 | 24 | -4.002969 | hypothetical protein | |
PSPTO_0713 | 0 | 23 | -3.616991 | conserved hypothetical protein | |
PSPTO_0714 | 0 | 22 | -3.811427 | autotransporter, putative | |
PSPTO_0715 | 1 | 35 | -4.033410 | conserved hypothetical protein | |
PSPTO_0716 | 1 | 29 | -4.201350 | DNA-binding protein | |
PSPTO_0717 | 0 | 21 | -3.074492 | DNA-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0715 | PF06057 | 33 | 0.001 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component |
11 | PSPTO_0731 | PSPTO_0767 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0731 | 2 | 15 | 1.312176 | lipoprotein, putative | |
PSPTO_0732 | 1 | 14 | 0.662128 | conserved protein of unknown function | |
PSPTO_0733 | 0 | 15 | 0.815538 | MORN repeat family protein | |
PSPTO_0734 | 1 | 16 | 0.959082 | MaoC-like domain protein | |
PSPTO_0735 | 1 | 16 | 1.903501 | LrgA family protein | |
PSPTO_0736 | 0 | 16 | 1.900411 | membrane protein, putative | |
PSPTO_0737 | 0 | 14 | 2.278216 | ATP-dependent protease La domain protein | |
PSPTO_0738 | 0 | 14 | 3.618864 | lipoprotein, putative | |
PSPTO_0739 | 0 | 14 | 3.671371 | lipoprotein, putative | |
PSPTO_0740 | 1 | 15 | 3.202124 | smtA protein | |
PSPTO_0741 | 2 | 14 | 3.154263 | conserved protein of unknown function | |
PSPTO_0742 | 1 | 13 | 2.916454 | MaoC-like domain protein | |
PSPTO_0743 | 1 | 13 | 3.138319 | oxidoreductase, short chain | |
PSPTO_0744 | 0 | 14 | 2.599032 | thiolase family protein | |
PSPTO_0745 | 1 | 17 | 3.034491 | protein of unknown function | |
PSPTO_0746 | 0 | 16 | 3.232421 | hypothetical protein | |
PSPTO_0747 | 0 | 17 | 3.046822 | transporter, putative | |
PSPTO_0748 | 0 | 17 | 3.525369 | RIO1/ZK632.3/MJ0444 family protein | |
PSPTO_0749 | 0 | 17 | 3.025278 | transcriptional regulator, heavy | |
PSPTO_0750 | 1 | 13 | 3.069044 | copper-translocating P-type ATPase | |
PSPTO_0751 | 1 | 13 | 2.673957 | conserved domain protein | |
PSPTO_0752 | 0 | 13 | 2.391364 | copZ protein, putative | |
PSPTO_0753 | -1 | 13 | 2.583694 | drug resistance transporter, Bcr/CflA family | |
PSPTO_0754 | -3 | 13 | 2.128446 | alcohol dehydrogenase, zinc-containing protein | |
PSPTO_0755 | -2 | 15 | 2.727898 | transcriptional regulator, LysR family | |
PSPTO_0756 | -1 | 17 | 2.765974 | transcriptional regulator, putative | |
PSPTO_0757 | -1 | 17 | 2.973632 | adenosine deaminase | |
PSPTO_0758 | 0 | 14 | 3.333093 | oxidoreductase, 2OG-Fe(II) oxygenase family | |
PSPTO_0759 | 1 | 13 | 2.911034 | bmp family protein | |
PSPTO_0760 | 2 | 12 | 3.248131 | iron(III) dicitrate transport system, | |
PSPTO_0761 | 1 | 12 | 2.624296 | iron(III) dicitrate transport system, permease | |
PSPTO_0762 | 0 | 11 | 2.774436 | iron(III) dicitrate transport system, permease | |
PSPTO_0763 | 0 | 13 | 2.264926 | iron(III) dicitrate transport system, | |
PSPTO_0764 | 0 | 14 | 2.490054 | calcium/proton antiporter, putative | |
PSPTO_0765 | 2 | 15 | 2.785328 | hydroxydechloroatrazine ethylaminohydrolase | |
PSPTO_0766 | 2 | 16 | 2.264635 | oxidoreductase, short-chain | |
PSPTO_0767 | 2 | 15 | 2.284062 | ABC transporter, permease protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0743 | DHBDHDRGNASE | 87 | 2e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0753 | TCRTETB | 67 | 4e-14 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0757 | SUBTILISIN | 33 | 0.001 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0763 | FERRIBNDNGPP | 72 | 1e-16 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0766 | DHBDHDRGNASE | 47 | 2e-08 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0767 | BCTERIALGSPD | 28 | 0.041 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D |
12 | PSPTO_0784 | PSPTO_0791 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0784 | 0 | 12 | 3.224251 | TonB-dependent siderophore receptor, putative | |
PSPTO_0785 | 2 | 13 | 4.371841 | sensor histidine kinase | |
PSPTO_0786 | -1 | 13 | 4.079647 | DNA-binding response regulator | |
PSPTO_0787 | 0 | 13 | 3.930151 | gamma-glutamyltranspeptidase | |
PSPTO_0788 | 2 | 14 | 4.909826 | phosphonate ABC transporter, permease protein, | |
PSPTO_0789 | 0 | 15 | 4.049520 | phosphonate ABC transporter, permease protein, | |
PSPTO_0790 | 1 | 16 | 3.727651 | phosphonate ABC transporter, ATP-binding | |
PSPTO_0791 | 0 | 15 | 3.052411 | phosphonate ABC transporter, periplasmic |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0786 | HTHFIS | 100 | 4e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
13 | PSPTO_0825 | PSPTO_0877 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0825 | 2 | 14 | 0.077922 | conserved protein of unknown function | |
PSPTO_0826 | 1 | 13 | -0.132354 | competence lipoprotein ComL, putative | |
PSPTO_0827 | 0 | 14 | -0.214044 | ribosomal large subunit pseudouridine synthase | |
PSPTO_0828 | 1 | 16 | -1.913483 | conserved protein of unknown function | |
PSPTO_0829 | 1 | 18 | -3.119276 | clpB protein | |
PSPTO_0831 | 1 | 33 | -5.743937 | ****conserved hypothetical protein | |
PSPTO_0832 | 1 | 37 | -7.969698 | ISPsy4, transposition helper protein | |
PSPTO_0833 | 2 | 43 | -8.666730 | ISPsy4, transposase | |
PSPTO_0834 | 2 | 49 | -10.697260 | alcohol dehydrogenase, zinc-containing protein | |
PSPTO_0835 | 1 | 47 | -10.575196 | ribD C-terminal domain protein | |
PSPTO_0836 | 2 | 42 | -9.142106 | conserved domain protein | |
PSPTO_0837 | 2 | 41 | -8.507822 | conserved protein of unknown function | |
PSPTO_0838 | -1 | 31 | -5.602748 | major facilitator family transporter | |
PSPTO_0840 | -1 | 25 | -4.138774 | protein of unknown function | |
PSPTO_0842 | -1 | 23 | -3.372491 | ISPsy5, Orf1 | |
PSPTO_0844 | -1 | 22 | -3.244609 | ISPssy, transposase | |
PSPTO_0847 | 1 | 25 | -2.955080 | hypothetical protein | |
PSPTO_0848 | 1 | 25 | -2.589037 | conserved hypothetical protein | |
PSPTO_0849 | 3 | 29 | -3.138348 | conserved hypothetical protein | |
PSPTO_0850 | 3 | 34 | -4.575395 | conserved hypothetical protein | |
PSPTO_0851 | 5 | 39 | -7.251567 | conserved protein of unknown function | |
PSPTO_0852 | 5 | 39 | -7.221636 | type III helper protein HopAJ1 | |
PSPTO_5621 | 4 | 37 | -7.344493 | PSPTO5621 | |
PSPTO_0853 | 4 | 36 | -7.343791 | dnaK suppressor protein, putative | |
PSPTO_0854 | 2 | 28 | -5.682017 | protein of unknown function | |
PSPTO_0855 | 2 | 27 | -5.243728 | ParA family protein | |
PSPTO_0856 | 2 | 21 | -3.098996 | conserved protein of unknown function | |
PSPTO_0857 | 2 | 20 | -2.259906 | conserved hypothetical protein | |
PSPTO_0858 | 2 | 19 | -2.098174 | protein of unknown function | |
PSPTO_0859 | 1 | 20 | -1.853175 | conserved hypothetical protein | |
PSPTO_0860 | 3 | 20 | -0.824480 | conserved hypothetical protein | |
PSPTO_0861 | 3 | 20 | -0.698974 | conserved hypothetical protein | |
PSPTO_0862 | 1 | 21 | -0.551275 | conserved hypothetical protein | |
PSPTO_0863 | 1 | 20 | -0.350456 | conserved hypothetical protein | |
PSPTO_0864 | 2 | 22 | -0.167219 | ISPsy4, transposition helper protein | |
PSPTO_0865 | 2 | 24 | -0.768257 | ISPsy4, transposase | |
PSPTO_0866 | 1 | 28 | -3.501180 | hypothetical protein | |
PSPTO_0867 | 2 | 29 | -5.684069 | conserved hypothetical protein | |
PSPTO_0868 | 3 | 34 | -7.283269 | hypothetical protein | |
PSPTO_0869 | 3 | 34 | -6.539142 | conserved hypothetical protein | |
PSPTO_0871 | 2 | 36 | -7.207393 | macrolide efflux protein, putative | |
PSPTO_0873 | 3 | 37 | -7.603871 | amidinotransferase family protein | |
PSPTO_0874 | 2 | 31 | -6.784369 | nikkomycin biosynthesis domain protein | |
PSPTO_0875 | 2 | 29 | -5.764942 | conserved protein of unknown function | |
PSPTO_0876 | 2 | 24 | -4.260242 | type III effector HopD1 | |
PSPTO_0877 | 2 | 23 | -4.751975 | type III effector HopQ1-1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0829 | HTHFIS | 40 | 3e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0833 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0838 | TCRTETA | 34 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0861 | TYPE4SSCAGX | 29 | 0.050 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0865 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0871 | TCRTETA | 39 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
14 | PSPTO_0894 | PSPTO_0902 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0894 | 1 | 16 | -3.091449 | lipoprotein, putative | |
PSPTO_0895 | 1 | 15 | -2.021341 | hypothetical protein | |
PSPTO_0896 | 1 | 15 | -1.733574 | sensor histidine kinase/response regulator | |
PSPTO_0897 | 1 | 20 | -2.971637 | DNA-binding response regulator, LuxR family | |
PSPTO_0898 | 1 | 23 | -3.229273 | sensor histidine kinase/response regulator | |
PSPTO_0899 | 4 | 28 | -4.848209 | conserved domain protein | |
PSPTO_0900 | 4 | 27 | -3.692411 | hypothetical protein | |
PSPTO_5619 | 3 | 27 | -4.419193 | PSPTO5619 | |
PSPTO_0901 | 1 | 28 | -4.541741 | type III effector HopAG1 | |
PSPTO_0902 | 1 | 21 | -3.374680 | ISPssy, transposase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0896 | HTHFIS | 44 | 8e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0897 | HTHFIS | 56 | 1e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0898 | HTHFIS | 46 | 2e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
15 | PSPTO_0920 | PSPTO_0927 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0920 | 2 | 19 | -4.307120 | conserved protein of unknown function | |
PSPTO_0921 | 0 | 18 | -5.039302 | hypothetical protein | |
PSPTO_0922 | 0 | 22 | -5.359911 | conserved protein of unknown function | |
PSPTO_0923 | 0 | 21 | -5.298131 | dephospho-CoA kinase | |
PSPTO_0924 | 1 | 23 | -5.728095 | type IV pilus prepilin peptidase PilD | |
PSPTO_0925 | 0 | 27 | -6.415666 | type IV pilus biogenesis protein PilC | |
PSPTO_0926 | -1 | 25 | -5.076313 | type IV pilus biogenesis protein PilB | |
PSPTO_0927 | 2 | 27 | -4.842825 | type IV pilus biogenesis protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0924 | PREPILNPTASE | 343 | e-121 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0925 | BCTERIALGSPF | 431 | e-152 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0927 | BCTERIALGSPG | 50 | 8e-11 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G |
16 | PSPTO_0939 | PSPTO_0957 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0939 | 2 | 21 | -2.624693 | HAD-superfamily hydrolase | |
PSPTO_0940 | 3 | 23 | -2.824702 | tellurium resistance protein TerZ | |
PSPTO_0941 | 3 | 18 | -2.654354 | tellurium resistance protein TerA | |
PSPTO_0942 | 3 | 17 | -2.310755 | tellurium resistance protein TerB | |
PSPTO_0943 | 2 | 16 | -1.042686 | tellurium resistance protein TerC | |
PSPTO_0944 | 1 | 11 | -0.360274 | tellurium resistance protein TerD | |
PSPTO_0945 | 2 | 10 | -0.152174 | tellurium resistance protein TerE | |
PSPTO_0946 | 1 | 9 | 0.487729 | tellurium resistance protein, putative | |
PSPTO_0947 | 0 | 9 | 0.908221 | conserved protein of unknown function | |
PSPTO_0948 | 1 | 11 | 0.711444 | nicotinate-nucleotide pyrophosphorylase | |
PSPTO_0949 | 1 | 10 | 2.017270 | conserved protein of unknown function | |
PSPTO_0950 | 2 | 13 | 3.089044 | N-acetyl-anhydromuramyl-L-alanine amidase AmpD | |
PSPTO_0951 | 2 | 13 | 3.304596 | ampE protein | |
PSPTO_0952 | 1 | 11 | 3.456912 | hydrolase, TatD family | |
PSPTO_0953 | 1 | 13 | 3.928036 | fructose repressor FruR, putative | |
PSPTO_0954 | -1 | 15 | 3.765569 | phosphoenolpyruvate-protein | |
PSPTO_0955 | -1 | 15 | 3.209473 | 1-phosphofructokinase | |
PSPTO_0956 | 0 | 16 | 2.972841 | phosphotransferase system, fructose-specific | |
PSPTO_0957 | 1 | 18 | 3.097260 | acetyl-CoA acetyltransferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0941 | GPOSANCHOR | 33 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0954 | PHPHTRNFRASE | 610 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase |
17 | PSPTO_1009 | PSPTO_1029 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1009 | 2 | 9 | 0.352274 | isochorismatase family protein | |
PSPTO_1010 | 1 | 9 | 0.305358 | alkaline phosphatase D | |
PSPTO_1011 | 1 | 13 | -1.897939 | acetyltransferase, GNAT family | |
PSPTO_1012 | 1 | 14 | -2.639872 | TonB system transport protein | |
PSPTO_1013 | 1 | 17 | -2.980197 | tonB domain protein | |
PSPTO_1014 | 0 | 16 | -3.839279 | TonB-dependent receptor, putative | |
PSPTO_1015 | 1 | 31 | -6.960200 | integrase/recombinase XerC, putative | |
PSPTO_1016 | 1 | 29 | -7.038893 | hypothetical protein | |
PSPTO_1017 | 1 | 21 | -5.238468 | ISPsy5, Orf1 | |
PSPTO_1019 | 1 | 18 | -3.055765 | ISPsy5, Orf1 | |
PSPTO_1020 | -1 | 16 | -1.790956 | ISPsy5, transposase | |
PSPTO_1022 | -1 | 12 | -0.669469 | type III effector HopAM1-1 | |
PSPTO_1023 | -1 | 13 | 1.950386 | MotA/TolQ/ExbB proton channel family protein | |
PSPTO_1024 | -1 | 12 | 2.357091 | phospholipase D family protein | |
PSPTO_1025 | 0 | 13 | 3.219724 | transglycosylase, putative | |
PSPTO_1026 | -1 | 13 | 3.067084 | cell morphology protein | |
PSPTO_1027 | 0 | 15 | 3.223787 | cellulose synthase, catalytic subunit | |
PSPTO_1028 | 0 | 15 | 3.645053 | cyclic di-GMP binding protein WssC, putative | |
PSPTO_1029 | 0 | 14 | 4.076604 | endoglucanase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1009 | ISCHRISMTASE | 39 | 7e-06 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1013 | TONBPROTEIN | 58 | 4e-12 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. |
18 | PSPTO_1062 | PSPTO_1100 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1062 | -1 | 20 | -3.708882 | protein of unknown function | |
PSPTO_1065 | -1 | 18 | -3.863553 | *DnaJ domain protein | |
PSPTO_1066 | -1 | 20 | -4.068147 | methyl-accepting chemotaxis protein | |
PSPTO_1067 | 0 | 27 | -5.931118 | glycosyl transferase, group 2 family protein | |
PSPTO_1068 | 0 | 27 | -6.190280 | membrane protein, putative | |
PSPTO_1069 | 0 | 26 | -6.325889 | membrane protein, putative | |
PSPTO_1070 | 0 | 24 | -5.841056 | lipopolysaccharide biosynthesis protein | |
PSPTO_1071 | 0 | 23 | -5.594162 | glycosyl transferase, group 2 family protein | |
PSPTO_1072 | 0 | 22 | -5.521785 | aminotransferase, DegT/DnrJ/EryC1/StrS family | |
PSPTO_1073 | 0 | 23 | -5.599355 | membrane protein, putative | |
PSPTO_1074 | 1 | 20 | -5.244565 | glycosyl transferase, group 2 family protein | |
PSPTO_1075 | 0 | 15 | -3.328751 | O-antigen ABC transporter, ATP-binding protein, | |
PSPTO_1076 | -1 | 15 | -3.156599 | O-antigen ABC transporter, permease protein, | |
PSPTO_1077 | 0 | 17 | -3.441718 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
PSPTO_1078 | 0 | 17 | -3.092283 | lipopolysaccharide biosynthesis protein | |
PSPTO_1079 | 1 | 14 | -2.204184 | glucose-1-phosphate thymidylyltransferase | |
PSPTO_1080 | 0 | 16 | -2.205245 | dTDP-4-dehydrorhamnose reductase | |
PSPTO_1081 | 0 | 13 | -1.675405 | dTDP-glucose 4,6-dehydratase | |
PSPTO_1082 | 1 | 18 | -2.930820 | hypothetical protein | |
PSPTO_1083 | 2 | 16 | -2.445360 | peptidase, S24 family | |
PSPTO_1084 | 0 | 14 | -2.318885 | integrase/recombinase XerD, putative | |
PSPTO_1085 | 1 | 16 | -4.810485 | conserved protein of unknown function | |
PSPTO_1086 | 1 | 18 | -5.560167 | type I restriction-modification system, M | |
PSPTO_1087 | 2 | 24 | -7.081978 | type I restriction-modification system, S | |
PSPTO_1088 | 1 | 26 | -6.746159 | conserved protein of unknown function | |
PSPTO_1089 | 1 | 29 | -7.561286 | type I restriction-modification enzyme, R | |
PSPTO_1090 | 3 | 44 | -9.410663 | protein of unknown function | |
PSPTO_1091 | 2 | 35 | -6.037545 | conserved protein of unknown function | |
PSPTO_1092 | 2 | 37 | -5.932358 | mobilization protein MobB | |
PSPTO_1093 | 2 | 32 | -5.144521 | relaxase/mobilization nuclease domain protein | |
PSPTO_1094 | 1 | 28 | -4.952907 | conserved protein of unknown function | |
PSPTO_1095 | 3 | 30 | -5.104328 | ISPsy4, transposase | |
PSPTO_1096 | 2 | 24 | -5.161095 | ISPsy4, transposition helper protein | |
PSPTO_1097 | 1 | 23 | -5.067646 | membrane protein, putative | |
PSPTO_1098 | 1 | 17 | -3.348225 | ISPsy5, transposase | |
PSPTO_1099 | 1 | 20 | -3.651205 | ISPsy5, Orf1 | |
PSPTO_1100 | 1 | 20 | -3.351362 | site-specific recombinase, phage integrase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1074 | CHANLCOLICIN | 35 | 0.004 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1076 | ABC2TRNSPORT | 30 | 0.011 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1080 | NUCEPIMERASE | 49 | 1e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1081 | NUCEPIMERASE | 182 | 5e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1083 | TYPE3OMOPROT | 26 | 0.047 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1084 | AUTOINDCRSYN | 28 | 0.049 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1095 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1097 | cloacin | 33 | 0.005 | Cloacin signature. | |
>cloacin#Cloacin signature. |
19 | PSPTO_1208 | PSPTO_1226 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1208 | 3 | 16 | 3.468399 | regulatory protein, putative | |
PSPTO_1209 | 2 | 16 | 2.388591 | RNA polymerase sigma-70 family protein | |
PSPTO_1210 | 1 | 14 | 2.153398 | conserved domain protein | |
PSPTO_1211 | 0 | 15 | 2.284956 | membrane protein, putative | |
PSPTO_1212 | 0 | 14 | 3.143620 | conserved protein of unknown function | |
PSPTO_1213 | -1 | 13 | 3.131271 | transcriptional regulator, AraC family | |
PSPTO_1214 | -1 | 13 | 2.900107 | membrane protein | |
PSPTO_1215 | 0 | 13 | 2.932027 | D-isomer specific 2-hydroxyacid dehydrogenase | |
PSPTO_1216 | 0 | 12 | 1.504751 | transcriptional regulator, LysR family | |
PSPTO_1217 | 1 | 14 | 1.090894 | outer membrane efflux protein | |
PSPTO_1218 | 1 | 14 | 0.304590 | fusaric acid resistance protein, putative | |
PSPTO_1219 | 1 | 19 | -1.348400 | conserved hypothetical protein | |
PSPTO_1220 | 0 | 20 | -2.314191 | fusaric acid resistance protein, putative | |
PSPTO_1221 | 1 | 21 | -3.357919 | transporter, LysE family | |
PSPTO_1222 | -1 | 17 | -2.299063 | conserved domain protein | |
PSPTO_1223 | 0 | 17 | -2.464909 | oxidoreductase, short chain | |
PSPTO_1224 | -1 | 22 | -3.851833 | conserved protein of unknown function | |
PSPTO_1226 | 0 | 16 | -3.386493 | ISPsy5, Orf1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1220 | RTXTOXIND | 50 | 5e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1223 | DHBDHDRGNASE | 77 | 1e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
20 | PSPTO_1322 | PSPTO_1327 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1322 | 2 | 20 | -1.598663 | acetyltransferase, GNAT family | |
PSPTO_1323 | 3 | 21 | -2.372944 | chemotaxis protein CheV, putative | |
PSPTO_1324 | 4 | 23 | -2.872008 | disulfide oxidoreductase | |
PSPTO_1325 | 4 | 20 | -3.129242 | cytochrome o ubiquinol oxidase, subunit II | |
PSPTO_1326 | 5 | 18 | -2.663248 | cytochrome o ubiquinol oxidase, subunit I | |
PSPTO_1327 | 3 | 15 | -2.697431 | cytochrome o ubiquinol oxidase, subunit III |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1322 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1323 | HTHFIS | 56 | 5e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
21 | PSPTO_1353 | PSPTO_1366 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1353 | 1 | 16 | 3.897981 | conserved hypothetical protein | |
PSPTO_1354 | 1 | 14 | 4.297683 | isochorismatase family protein | |
PSPTO_1355 | 1 | 15 | 3.940692 | ABC transporter, ATP-binding protein | |
PSPTO_1356 | 1 | 13 | 3.959025 | isochorismatase family protein | |
PSPTO_1357 | 0 | 12 | 3.615105 | aliphatic amidase | |
PSPTO_1358 | 0 | 12 | 3.144486 | ABC transporter, permease protein | |
PSPTO_1359 | -1 | 12 | 2.135172 | ABC transporter, permease protein | |
PSPTO_1360 | -2 | 12 | 1.142256 | bmp family protein | |
PSPTO_1361 | -1 | 12 | 0.895851 | amidase family protein | |
PSPTO_1362 | -1 | 13 | -1.546855 | conserved protein of unknown function | |
PSPTO_1363 | -1 | 14 | -1.981423 | sugar transporter family protein | |
PSPTO_1364 | 0 | 26 | -4.292601 | conserved protein of unknown function | |
PSPTO_1365 | 1 | 29 | -4.715179 | glutathione S-transferase | |
PSPTO_1366 | 0 | 27 | -4.200077 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1354 | ISCHRISMTASE | 66 | 4e-15 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1356 | ISCHRISMTASE | 50 | 2e-09 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1357 | PF06917 | 30 | 0.012 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1363 | TCRTETA | 34 | 8e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
22 | PSPTO_1381 | PSPTO_1396 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1381 | 2 | 16 | 0.875479 | type III helper protein HrpA1 | |
PSPTO_1382 | 3 | 16 | 1.052148 | type III helper protein HrpZ1 | |
PSPTO_1383 | 3 | 17 | 1.630546 | type III secretion protein HrpB | |
PSPTO_1384 | 0 | 12 | 0.513486 | type III secretion protein HrcJ | |
PSPTO_1385 | -1 | 13 | 0.556264 | type III secretion protein HrpD | |
PSPTO_1386 | -1 | 14 | -0.254052 | type III secretion protein HrpE | |
PSPTO_1387 | -1 | 13 | -1.301645 | type III secretion protein HrpF | |
PSPTO_1388 | -1 | 12 | -0.671075 | type III secretion protein HrpG | |
PSPTO_1389 | 0 | 11 | -1.154717 | outer-membrane type III secretion protein HrcC | |
PSPTO_1390 | 2 | 16 | -1.045851 | type III secretion protein HrpT | |
PSPTO_1391 | 3 | 15 | -0.771830 | negative regulator of hrp expression HrpV | |
PSPTO_1392 | 4 | 15 | 0.441134 | type III secretion protein HrcU | |
PSPTO_1393 | 3 | 15 | 1.681088 | type III secretion protein HrcT | |
PSPTO_1394 | 3 | 16 | 1.225591 | type III secretion protein HrcS | |
PSPTO_1395 | 0 | 16 | 2.966305 | type III secretion protein HrcR | |
PSPTO_1396 | 0 | 15 | 3.570130 | type III secretion protein HrcQb |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1382 | cloacin | 31 | 0.007 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1384 | FLGMRINGFLIF | 97 | 5e-25 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1389 | TYPE3OMGPROT | 621 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1392 | TYPE3IMSPROT | 407 | e-144 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1393 | TYPE3IMRPROT | 167 | 4e-53 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1394 | TYPE3IMQPROT | 74 | 4e-21 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1395 | TYPE3IMPPROT | 233 | 2e-80 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1396 | TYPE3OMOPROT | 50 | 4e-10 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein |
23 | PSPTO_1405 | PSPTO_1409 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1405 | 2 | 23 | -3.522612 | type III helper protein HrpK1 | |
PSPTO_1406 | 1 | 29 | -5.312711 | type III effector HopB1 | |
PSPTO_1407 | 2 | 30 | -6.806371 | ISPssy transposase or derivative | |
PSPTO_5622 | 2 | 23 | -4.144971 | PSPTO5622 | |
PSPTO_1408 | 2 | 16 | -2.701583 | protein of unknown function | |
PSPTO_1409 | 2 | 16 | -3.089884 | conserved protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5622 | PF00577 | 27 | 0.011 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD |
24 | PSPTO_1420 | PSPTO_1426 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1420 | 2 | 18 | 0.124438 | RNA methyltransferase, TrmH family, group 1 | |
PSPTO_1421 | 2 | 18 | -0.607933 | serine O-acetyltransferase | |
PSPTO_1422 | 3 | 19 | 0.068366 | rrf2 family protein | |
PSPTO_1423 | 3 | 19 | 0.177314 | cysteine desulfurase | |
PSPTO_1424 | 3 | 20 | 0.304724 | iron-binding protein IscU | |
PSPTO_1425 | 3 | 23 | -0.082089 | iron-binding protein IscA | |
PSPTO_1426 | 2 | 21 | -0.495486 | co-chaperone Hsc20 |
25 | PSPTO_1563 | PSPTO_1571 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1563 | -1 | 25 | -4.093973 | protein-L-isoaspartate O-methyltransferase | |
PSPTO_1564 | -1 | 30 | -5.461550 | lipoprotein NlpD, putative | |
PSPTO_1565 | 0 | 28 | -5.788921 | RNA polymerase sigma-38 factor | |
PSPTO_1566 | 1 | 33 | -6.793034 | hypothetical protein | |
PSPTO_1567 | 1 | 35 | -7.360240 | ISPsy6, transposase | |
PSPTO_1568 | 2 | 41 | -8.266598 | type III effector HopAF1 | |
PSPTO_5620 | -2 | 20 | -4.520033 | PSPTO5620 | |
PSPTO_1570 | -1 | 19 | -4.102043 | hypothetical protein | |
PSPTO_1571 | -1 | 20 | -3.805015 | protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1564 | RTXTOXIND | 37 | 9e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1571 | FLGHOOKAP1 | 30 | 0.018 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. |
26 | PSPTO_1644 | PSPTO_1660 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1644 | 0 | 12 | 3.207284 | ATP-dependent DNA helicase RecQ | |
PSPTO_1645 | 0 | 17 | 4.121080 | transcriptional regulator, MarR family | |
PSPTO_1646 | 1 | 18 | 4.056868 | LysM domain protein | |
PSPTO_1647 | 2 | 22 | 3.908380 | lipoprotein, putative | |
PSPTO_1648 | 0 | 18 | 2.385495 | aerotaxis receptor | |
PSPTO_1649 | 1 | 16 | 1.509481 | autotransporter, putative | |
PSPTO_1650 | 0 | 16 | -0.027712 | autotransporter, putative | |
PSPTO_1651 | 0 | 24 | -4.783726 | conserved hypothetical protein | |
PSPTO_1652 | 1 | 28 | -5.636594 | conserved hypothetical protein | |
PSPTO_1653 | 2 | 27 | -5.774650 | conserved domain protein | |
PSPTO_1654 | 2 | 27 | -4.917121 | conserved protein of unknown function | |
PSPTO_1655 | 2 | 26 | -5.299848 | protein of unknown function | |
PSPTO_1656 | 2 | 20 | -4.598164 | conserved protein of unknown function | |
PSPTO_1657 | 3 | 19 | -4.262328 | protein of unknown function | |
PSPTO_1658 | 0 | 15 | -3.415225 | ISPsy4, transposition helper protein | |
PSPTO_1659 | 0 | 15 | -3.471712 | ISPsy4, transposase | |
PSPTO_1660 | -1 | 15 | -3.960501 | helicase/SNF2 family domain protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1646 | IGASERPTASE | 35 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1649 | SUBTILISIN | 159 | 5e-45 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1650 | SUBTILISIN | 156 | 3e-44 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1657 | IGASERPTASE | 30 | 0.037 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1659 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
27 | PSPTO_1705 | PSPTO_1728 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1705 | 0 | 14 | 3.423656 | NLP/P60 family protein | |
PSPTO_1706 | 1 | 14 | 4.155029 | lipoprotein, putative | |
PSPTO_1707 | 1 | 15 | 4.683986 | L-sorbosone dehydrogenase | |
PSPTO_1708 | 2 | 18 | 5.181566 | cob(I)alamin adenosyltransferase | |
PSPTO_1709 | 2 | 18 | 5.302091 | cobyrinic acid a,c-diamide synthase family | |
PSPTO_1710 | 3 | 18 | 5.230858 | nitroreductase family protein | |
PSPTO_1711 | 2 | 18 | 5.327595 | cobalamin biosynthesis protein CobD | |
PSPTO_1712 | 3 | 16 | 5.223043 | cobalamin biosynthesis protein CobC | |
PSPTO_1713 | 3 | 16 | 4.526650 | cobyric acid synthase | |
PSPTO_1714 | 3 | 14 | 3.584740 | cobinamide kinase/cobinamide phosphate | |
PSPTO_1715 | 1 | 11 | 2.090369 | nicotinate-nucleotide--dimethylbenzimidazole | |
PSPTO_1716 | 1 | 9 | 0.323743 | alpha-ribazole-5'-phosphate phosphatase, | |
PSPTO_1717 | 0 | 10 | 0.043226 | cobalamin (5'-phosphate) synthase | |
PSPTO_1718 | -1 | 12 | -1.293034 | transporter, putative | |
PSPTO_1719 | 0 | 12 | -1.449998 | glutathione peroxidase family protein | |
PSPTO_1720 | -1 | 13 | -1.617886 | outer membrane protein | |
PSPTO_1721 | 2 | 17 | -1.898047 | conserved domain protein | |
PSPTO_1722 | 4 | 19 | -0.939095 | protein of unknown function | |
PSPTO_1723 | 4 | 19 | -0.438537 | hypothetical protein | |
PSPTO_1724 | 5 | 15 | 0.396367 | conserved hypothetical protein | |
PSPTO_1725 | 2 | 15 | 0.533280 | conserved protein of unknown function | |
PSPTO_1726 | 3 | 14 | 1.960774 | hypothetical protein | |
PSPTO_1727 | 4 | 12 | 2.536485 | hypothetical protein | |
PSPTO_1728 | 5 | 13 | 2.639142 | conserved hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1718 | TCRTETB | 43 | 1e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1719 | INFPOTNTIATR | 28 | 0.020 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1724 | RTXTOXIND | 44 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
28 | PSPTO_1743 | PSPTO_1748 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1743 | 2 | 16 | 2.302613 | hydrolase, Atz/Trz family | |
PSPTO_1744 | 2 | 14 | 1.901805 | initiation factor 2 subunit family | |
PSPTO_1745 | 2 | 19 | 0.400801 | DNA gyrase, subunit A | |
PSPTO_1746 | 2 | 15 | -0.606797 | phosphoserine aminotransferase | |
PSPTO_1747 | 2 | 15 | -0.964521 | chorismate mutase/prephenate dehydratase | |
PSPTO_1748 | 2 | 14 | -0.915072 | prephenate dehydrogenase/3-phosphoshikimate |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1743 | UREASE | 34 | 0.002 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1745 | RTXTOXIND | 31 | 0.022 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1747 | adhesinmafb | 29 | 0.035 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. |
29 | PSPTO_1786 | PSPTO_1792 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1786 | -1 | 14 | 3.174640 | ****conserved hypothetical protein | |
PSPTO_1787 | 0 | 12 | 3.591427 | transcriptional regulator, LysR family | |
PSPTO_1788 | 0 | 13 | 3.474020 | ABC transporter, periplasmic substrate-binding | |
PSPTO_1789 | 0 | 13 | 3.400452 | dimethylsulfoxide reductase | |
PSPTO_1790 | 0 | 12 | 3.420076 | acyl-CoA dehydrogenase family protein | |
PSPTO_1791 | -1 | 12 | 2.555743 | ABC transporter, periplasmic substrate-binding | |
PSPTO_1792 | 0 | 14 | 3.263407 | rhodanese-like domain protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1788 | PYOCINKILLER | 29 | 0.026 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. |
30 | PSPTO_1844 | PSPTO_1858 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1844 | 0 | 21 | -3.422403 | carbon storage regulator | |
PSPTO_1845 | 1 | 24 | -3.574905 | ***conserved hypothetical protein | |
PSPTO_1846 | 4 | 28 | -4.249106 | magnesium transporter | |
PSPTO_1847 | 2 | 25 | -3.507493 | transcriptional repressor, putative | |
PSPTO_1848 | 2 | 26 | -3.532936 | hypothetical protein | |
PSPTO_1849 | 2 | 26 | -3.324538 | hypothetical protein | |
PSPTO_1850 | 2 | 22 | -3.196080 | *protein of unknown function | |
PSPTO_1851 | 1 | 21 | -3.665332 | protein of unknown function | |
PSPTO_1852 | -1 | 19 | -3.121121 | mechanosensitive ion channel family protein | |
PSPTO_1853 | 0 | 26 | -4.947418 | hypothetical protein | |
PSPTO_1854 | 0 | 25 | -4.728703 | conserved hypothetical protein | |
PSPTO_1855 | 0 | 25 | -4.723267 | TonB-dependent receptor, putative | |
PSPTO_1856 | -2 | 28 | -3.903781 | transcriptional regulator, AraC family | |
PSPTO_1857 | -1 | 21 | -2.384236 | transcriptional regulator, AraC family | |
PSPTO_1858 | 2 | 17 | -1.935209 | aliphatic isothiocyanate resistance protein |
31 | PSPTO_1886 | PSPTO_1891 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1886 | 0 | 17 | 3.117309 | L-serine dehydratase 1 | |
PSPTO_1887 | 0 | 15 | 3.423855 | transcriptional regulator, LysR family | |
PSPTO_1888 | -1 | 15 | 3.599436 | membrane protein, putative | |
PSPTO_1889 | -1 | 16 | 3.624937 | conserved hypothetical protein | |
PSPTO_1890 | -2 | 17 | 3.327043 | 4-aminobutyrate aminotransferase | |
PSPTO_1891 | -2 | 15 | 3.286538 | piperideine-6-carboxylate dehydrogenase |
32 | PSPTO_1924 | PSPTO_1949 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1924 | -1 | 16 | -3.692620 | conserved protein of unknown function | |
PSPTO_1925 | -1 | 16 | -3.608605 | negative regulator of flagellin synthesis FlgM, | |
PSPTO_1926 | 0 | 17 | -3.233952 | flagellar protein, putative | |
PSPTO_1927 | 0 | 18 | -3.632518 | chemotaxis protein CheV, putative | |
PSPTO_1928 | 0 | 17 | -2.977592 | chemotaxis protein methyltransferase CheR | |
PSPTO_1929 | -1 | 20 | -3.521097 | ISPsy6, transposase | |
PSPTO_1930 | -1 | 16 | -2.038461 | cyanate lyase | |
PSPTO_1931 | 2 | 17 | -2.021308 | conserved protein of unknown function | |
PSPTO_1932 | 2 | 14 | -0.857687 | hypothetical protein | |
PSPTO_1933 | 2 | 15 | -0.694836 | flagellar basal-body rod protein FlgB | |
PSPTO_1934 | 2 | 15 | -0.169507 | flagellar basal-body rod protein FlgC | |
PSPTO_1935 | 2 | 15 | 0.347590 | basal-body rod modification protein FlgD | |
PSPTO_1936 | 1 | 15 | 0.798401 | flagellar hook protein FlgE | |
PSPTO_1937 | 0 | 15 | 1.784077 | flagellar hook protein FlgE | |
PSPTO_1938 | 1 | 19 | 2.028041 | hypothetical protein | |
PSPTO_1939 | 1 | 18 | 1.534897 | flagellar basal-body rod protein FlgF | |
PSPTO_1940 | 2 | 16 | 1.236830 | flagellar basal-body rod protein FlgG | |
PSPTO_1941 | 0 | 11 | 0.727628 | flagellar L-ring protein FlgH | |
PSPTO_1942 | -1 | 12 | 0.474378 | flagellar P-ring protein FlgI | |
PSPTO_1943 | -2 | 11 | -0.106966 | peptidoglycan hydrolase FlgJ | |
PSPTO_1944 | -1 | 11 | -0.593820 | flagellar hook-associated protein FlgK | |
PSPTO_1945 | -2 | 12 | -1.102233 | flagellar hook-associated protein FlgL | |
PSPTO_1946 | -2 | 12 | -1.276266 | glycosyl transferase, group 2 family protein | |
PSPTO_1947 | 0 | 16 | -1.851830 | glycosyl transferase, group 2 family protein | |
PSPTO_1948 | 1 | 21 | -3.033833 | 3-oxoacyl-(acyl-carrier-protein) synthase III, | |
PSPTO_1949 | 2 | 17 | -1.765176 | flagellin |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1927 | HTHFIS | 54 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1934 | FLGHOOKAP1 | 35 | 9e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1936 | FLGHOOKAP1 | 41 | 5e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1937 | FLGHOOKAP1 | 36 | 3e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1940 | FLGHOOKAP1 | 43 | 9e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1941 | FLGLRINGFLGH | 174 | 1e-56 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1942 | FLGPRINGFLGI | 433 | e-154 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1943 | FLGFLGJ | 126 | 2e-35 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1944 | FLGHOOKAP1 | 192 | 1e-55 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1945 | FLAGELLIN | 61 | 4e-12 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1949 | FLAGELLIN | 118 | 2e-32 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. |
33 | PSPTO_1960 | PSPTO_1973 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1960 | 2 | 14 | 1.089212 | flagellar assembly protein Flih, putative | |
PSPTO_1961 | 1 | 12 | 1.677921 | flagellum-specific ATP synthase FliI | |
PSPTO_1962 | 2 | 17 | 0.412919 | flagellar protein FliJ, putative | |
PSPTO_1963 | 2 | 15 | 0.094531 | STAS domain protein | |
PSPTO_1964 | 1 | 14 | 0.179283 | response regulator | |
PSPTO_1965 | 1 | 16 | 0.062207 | Hpt domain protein | |
PSPTO_1966 | 1 | 14 | 0.819531 | flagellar hook-length control protein FliK | |
PSPTO_1967 | 3 | 19 | -0.569506 | hypothetical protein | |
PSPTO_1968 | 3 | 22 | -0.271141 | flagellar protein FliL, putative | |
PSPTO_1969 | 6 | 22 | -0.057985 | flagellar motor switch protein FliM | |
PSPTO_1970 | 5 | 20 | 0.005987 | flagellar motor switch protein FliN | |
PSPTO_1971 | 3 | 17 | -0.378726 | flagellar protein FliO | |
PSPTO_1972 | 3 | 14 | -0.149212 | flagellar biosynthetic protein FliP | |
PSPTO_1973 | 2 | 13 | 0.274464 | flagellar biosynthetic protein FliQ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1960 | FLGFLIH | 51 | 6e-10 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1962 | FLGFLIJ | 44 | 3e-08 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1964 | HTHFIS | 71 | 4e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1966 | FLGHOOKFLIK | 49 | 3e-08 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1969 | FLGMOTORFLIM | 252 | 2e-84 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1970 | FLGMOTORFLIN | 120 | 6e-38 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1972 | FLGBIOSNFLIP | 261 | 2e-90 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1973 | TYPE3IMQPROT | 49 | 1e-11 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein |
34 | PSPTO_1992 | PSPTO_2009 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1992 | 3 | 15 | 3.362423 | conserved protein of unknown function | |
PSPTO_1993 | 2 | 14 | 3.097298 | oxygen-independent coproporphyrinogen III | |
PSPTO_1994 | 2 | 12 | 3.225685 | membrane protein, putative | |
PSPTO_1995 | 1 | 13 | 2.440829 | cytochrome oxidase maturation protein, | |
PSPTO_1996 | 0 | 14 | 2.670794 | copper-translocating P-type ATPase | |
PSPTO_1997 | 0 | 16 | 1.237832 | conserved hypothetical protein | |
PSPTO_1998 | -1 | 14 | 1.017270 | FixG-related protein | |
PSPTO_1999 | 2 | 17 | 1.422196 | PIN domain protein | |
PSPTO_2000 | 1 | 14 | 1.602177 | prevent-host-death family protein | |
PSPTO_2001 | 1 | 13 | 1.192118 | cytochrome c oxidase, cbb3-type, subunit III | |
PSPTO_2002 | 2 | 10 | -0.313343 | cytochrome c oxidase, cbb3-type, CcoQ subunit | |
PSPTO_2003 | 1 | 12 | -1.111629 | cytochrome c oxidase, cbb3-type, subunit II | |
PSPTO_2004 | 1 | 16 | -2.990754 | cytochrome c oxidase, cbb3-type, subunit I | |
PSPTO_2005 | 1 | 23 | -4.166260 | conserved domain protein | |
PSPTO_2006 | 2 | 22 | -4.497996 | hypothetical protein | |
PSPTO_2007 | 2 | 23 | -4.661430 | hypothetical protein | |
PSPTO_2008 | 2 | 27 | -5.486745 | ISPssy, transposase | |
PSPTO_2009 | 1 | 19 | -3.864224 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1994 | ACRIFLAVINRP | 27 | 0.048 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2005 | PHPHTRNFRASE | 30 | 0.013 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2007 | INTIMIN | 52 | 4e-09 | Intimin signature. | |
>INTIMIN#Intimin signature. |
35 | PSPTO_2066 | PSPTO_2091 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2066 | 0 | 20 | -3.354904 | protein of unknown function | |
PSPTO_2067 | -1 | 18 | -2.987659 | hypothetical protein | |
PSPTO_2068 | -1 | 20 | -3.539621 | conserved protein of unknown function | |
PSPTO_2069 | -1 | 24 | -3.495323 | hypothetical protein | |
PSPTO_2070 | 0 | 28 | -3.996306 | cytochrome c2 | |
PSPTO_2071 | 3 | 32 | -5.676231 | conserved hypothetical protein | |
PSPTO_2072 | 4 | 33 | -5.531758 | auxin-binding protein, putative | |
PSPTO_2073 | 7 | 36 | -5.803563 | protein of unknown function | |
PSPTO_2074 | 5 | 30 | -5.209718 | hypothetical protein | |
PSPTO_2075 | 7 | 29 | -4.848529 | hypothetical protein | |
PSPTO_2076 | 5 | 21 | -3.256257 | hypothetical protein | |
PSPTO_2077 | 5 | 22 | -1.617494 | conserved domain protein | |
PSPTO_2078 | 6 | 27 | -3.642138 | hypothetical protein | |
PSPTO_2079 | 7 | 28 | -3.637051 | hypothetical protein | |
PSPTO_2080 | 7 | 25 | -3.368853 | conserved hypothetical protein, internal | |
PSPTO_2081 | 7 | 25 | -3.113153 | hypothetical protein | |
PSPTO_2082 | 7 | 23 | -3.315984 | tail length tape measure protein, internal | |
PSPTO_2083 | 3 | 21 | -2.513897 | protein of unknown function | |
PSPTO_2084 | 1 | 17 | 0.468941 | conserved hypothetical protein | |
PSPTO_2085 | 1 | 17 | -0.218438 | conserved protein of unknown function | |
PSPTO_2086 | 1 | 20 | -1.290054 | protein of unknown function | |
PSPTO_2087 | 2 | 22 | -1.962351 | hypothetical protein | |
PSPTO_2088 | 1 | 21 | -1.708192 | conserved hypothetical protein | |
PSPTO_2089 | 1 | 21 | -1.375381 | host specificity protein J, internal deletion | |
PSPTO_2090 | 2 | 29 | -2.985644 | hypothetical protein | |
PSPTO_2091 | 2 | 21 | -1.298577 | conserved domain protein |
36 | PSPTO_2130 | PSPTO_2142 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2130 | 1 | 16 | 3.733073 | DNA-binding response regulator, LuxR family | |
PSPTO_2131 | 1 | 15 | 3.703922 | sensor histidine kinase | |
PSPTO_2132 | 0 | 15 | 3.546820 | conserved hypothetical protein | |
PSPTO_2133 | 1 | 16 | 3.779829 | RNA polymerase sigma-70 family protein | |
PSPTO_2134 | 0 | 16 | 3.912789 | pyoverdine synthetase, thioesterase component | |
PSPTO_2135 | 0 | 16 | 3.960256 | pyoverdine chromophore precursor synthetase | |
PSPTO_2136 | -1 | 18 | 3.437283 | 2,4-diaminobutyrate 4-transaminase | |
PSPTO_2137 | -1 | 16 | 3.321362 | MbtH-like protein | |
PSPTO_2138 | -1 | 17 | 3.821830 | ABC transporter, periplasmic substrate-binding | |
PSPTO_2139 | -1 | 18 | 3.607944 | cation ABC transporter, permease protein | |
PSPTO_2140 | 0 | 18 | 2.983894 | cation ABC transporter, ATP-binding protein | |
PSPTO_2141 | -1 | 21 | 2.308912 | cation ABC transporter, periplasmic | |
PSPTO_2142 | -1 | 20 | 3.672475 | conserved protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2130 | HTHFIS | 58 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2135 | ISCHRISMTASE | 33 | 0.031 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2138 | adhesinb | 54 | 2e-10 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2141 | ADHESNFAMILY | 166 | 2e-51 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. |
37 | PSPTO_2152 | PSPTO_5624 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2152 | 0 | 22 | 3.115274 | TonB-dependent siderophore receptor, putative | |
PSPTO_2153 | 0 | 21 | 3.676222 | pyoverdine ABC transporter, ATP-binding/permease | |
PSPTO_2154 | 0 | 19 | 3.985619 | conserved protein of unknown function | |
PSPTO_2155 | 0 | 17 | 3.893897 | aminotransferase, class V | |
PSPTO_2156 | -1 | 14 | 3.619059 | renal dipeptidase family protein | |
PSPTO_5624 | -1 | 12 | 3.344368 | Tat (twin-arginine translocation) pathway signal |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2155 | SUBTILISIN | 31 | 0.012 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. |
38 | PSPTO_2192 | PSPTO_2204 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2192 | 3 | 23 | -0.929685 | conserved protein of unknown function | |
PSPTO_2193 | 2 | 24 | -1.241630 | conserved protein of unknown function | |
PSPTO_2194 | 3 | 25 | -1.018704 | citrate synthase I | |
PSPTO_2195 | 2 | 27 | -1.221841 | succinate dehydrogenase, cytochrome b556 | |
PSPTO_2196 | 2 | 27 | -0.836917 | succinate dehydrogenase, hydrophobic membrane | |
PSPTO_2197 | 2 | 28 | -0.953224 | succinate dehydrogenase, flavoprotein subunit | |
PSPTO_2198 | 2 | 29 | -1.184065 | succinate dehydrogenase, iron-sulfur protein | |
PSPTO_2199 | 1 | 22 | -1.755632 | 2-oxoglutarate dehydrogenase, E1 component | |
PSPTO_2200 | -1 | 21 | -1.800077 | 2-oxoglutarate dehydrogenase, E2 component, | |
PSPTO_2201 | -1 | 15 | -0.886520 | 2-oxoglutarate dehydrogenase, E3 component, | |
PSPTO_2202 | 0 | 13 | -1.255779 | succinyl-CoA synthase, beta subunit | |
PSPTO_2203 | 1 | 11 | -1.274359 | succinyl-CoA synthase, alpha subunit | |
PSPTO_2204 | 2 | 9 | -1.037807 | ISPsy6, transposase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2200 | IGASERPTASE | 35 | 4e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
39 | PSPTO_2215 | PSPTO_2266 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2215 | 0 | 14 | 3.442435 | phosphohistidine phosphatase SixA | |
PSPTO_2216 | 0 | 15 | 2.929168 | 4-hydroxybenzoyl-CoA thioesterase domain | |
PSPTO_2217 | 0 | 16 | 3.148359 | conserved protein of unknown function | |
PSPTO_2218 | 0 | 18 | 3.238613 | hydrolase, alpha/beta fold family | |
PSPTO_2219 | -1 | 16 | -0.302894 | hypothetical protein | |
PSPTO_2220 | -1 | 13 | -0.121515 | conserved protein of unknown function | |
PSPTO_2221 | 0 | 16 | -1.128109 | lipoprotein, putative | |
PSPTO_2222 | 1 | 18 | -1.801148 | sensor histidine kinase | |
PSPTO_2223 | 2 | 17 | -1.816583 | DNA-binding response regulator | |
PSPTO_2224 | 2 | 18 | -2.072229 | hypothetical protein | |
PSPTO_2225 | 1 | 15 | -0.935265 | autotransporter, putative | |
PSPTO_2226 | 2 | 18 | -1.211103 | conserved domain protein | |
PSPTO_2227 | 2 | 17 | -1.214773 | fimbrial protein, putative | |
PSPTO_2228 | 1 | 16 | -1.589822 | outer membrane usher protein fimD | |
PSPTO_2229 | 1 | 19 | -2.631412 | chaperone protein PapD | |
PSPTO_2230 | 2 | 20 | -2.790941 | type I pilus biogensis protein FimA | |
PSPTO_2231 | 1 | 20 | -2.602472 | YD repeat protein | |
PSPTO_2232 | 2 | 21 | -2.791104 | hypothetical protein | |
PSPTO_2233 | 1 | 21 | -2.973928 | hypothetical protein | |
PSPTO_2234 | 1 | 20 | -3.023763 | ISPssy, transposase | |
PSPTO_2235 | 2 | 20 | -2.796075 | hypothetical protein | |
PSPTO_2236 | 2 | 19 | -2.815580 | hypothetical protein | |
PSPTO_2237 | 2 | 14 | -2.032954 | hypothetical protein | |
PSPTO_2238 | 0 | 9 | -0.656104 | lipoprotein, putative | |
PSPTO_2239 | 0 | 10 | 0.161769 | YD repeat protein | |
PSPTO_2240 | -1 | 17 | 4.864279 | transcriptional regulator, LuxR family | |
PSPTO_2241 | -1 | 17 | 4.860277 | conserved hypothetical protein | |
PSPTO_2242 | -1 | 17 | 4.837628 | potassium-transporting ATPase, A subunit | |
PSPTO_2243 | -1 | 17 | 4.857560 | potassium-transporting ATPase, B subunit | |
PSPTO_2244 | -1 | 15 | 4.753613 | potassium-transporting ATPase, C subunit | |
PSPTO_2245 | 0 | 15 | 4.407997 | sensor protein KdpD | |
PSPTO_2246 | 2 | 16 | 3.436025 | KDP operon transcriptional regulatory protein | |
PSPTO_2247 | 3 | 14 | 3.073954 | lipoprotein, putative | |
PSPTO_2248 | 3 | 14 | 3.410612 | moxR protein, putative | |
PSPTO_2249 | 3 | 11 | 3.214891 | conserved protein of unknown function | |
PSPTO_2250 | 2 | 12 | 2.677116 | transglutaminase-like domain protein | |
PSPTO_2251 | 2 | 13 | 2.179735 | conserved protein of unknown function | |
PSPTO_2253 | 0 | 13 | 0.557625 | conserved domain protein | |
PSPTO_2254 | 0 | 14 | 0.751214 | methyl-accepting chemotaxis protein | |
PSPTO_2255 | -1 | 19 | -0.390086 | hydrolase, TatD family | |
PSPTO_2256 | -1 | 22 | -1.552084 | transglycosylase, SLT family | |
PSPTO_2257 | -1 | 27 | -2.456087 | DoxD-like family protein | |
PSPTO_2259 | -1 | 28 | -2.675921 | sigma-54 dependent transcriptional regulator | |
PSPTO_2260 | 0 | 24 | -3.039041 | conserved protein of unknown function | |
PSPTO_2261 | 1 | 13 | -0.126405 | racemase, putative | |
PSPTO_2262 | 1 | 9 | 0.812741 | hypothetical protein | |
PSPTO_2263 | 1 | 10 | 2.423809 | hypothetical protein | |
PSPTO_2264 | 2 | 11 | 3.063633 | hypothetical protein | |
PSPTO_2265 | 0 | 12 | 3.105162 | transcription elongation factor GreB | |
PSPTO_2266 | 1 | 13 | 3.544297 | permease, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2222 | PF06580 | 33 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2223 | HTHFIS | 90 | 8e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2225 | PRTACTNFAMLY | 317 | 8e-98 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2228 | PF00577 | 748 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2237 | FbpA_PF05833 | 31 | 0.021 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2245 | PF06580 | 31 | 0.028 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2246 | HTHFIS | 94 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2248 | HTHFIS | 30 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2251 | TYPE3OMGPROT | 29 | 0.015 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2253 | ACRIFLAVINRP | 27 | 0.010 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2257 | PF06917 | 27 | 0.025 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2259 | HTHFIS | 307 | 2e-98 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
40 | PSPTO_2314 | PSPTO_2323 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2314 | -1 | 14 | -3.146313 | D-alanyl-D-alanine carboxypeptidase | |
PSPTO_2315 | 1 | 29 | -6.227529 | conserved protein of unknown function | |
PSPTO_2316 | 1 | 28 | -5.283066 | sensor histidine kinase/response regulator | |
PSPTO_2317 | 4 | 35 | -6.682522 | conserved domain protein | |
PSPTO_2318 | 3 | 35 | -6.413025 | protein of unknown function | |
PSPTO_2319 | 2 | 30 | -5.866212 | resolvase, putative | |
PSPTO_2320 | 3 | 31 | -6.033437 | hypothetical protein | |
PSPTO_2321 | -1 | 18 | -3.278037 | ISPsy4, transposase | |
PSPTO_2322 | -1 | 18 | -3.995949 | ISPsy4, transposition helper protein | |
PSPTO_2323 | -1 | 17 | -3.925879 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2314 | PF05616 | 29 | 0.045 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2316 | HTHFIS | 73 | 5e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2321 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
41 | PSPTO_2405 | PSPTO_2411 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2405 | 1 | 14 | 3.252558 | xenobiotic reductase A | |
PSPTO_2406 | 1 | 14 | 3.966505 | conserved protein of unknown function | |
PSPTO_2407 | 1 | 14 | 4.518599 | conserved hypothetical protein | |
PSPTO_2408 | 1 | 18 | 4.826052 | urease accessory protein UreD | |
PSPTO_2409 | -1 | 19 | 3.491842 | urease accessory protein UreG | |
PSPTO_2411 | -2 | 21 | 3.053677 | urease, beta/gamma subunit |
42 | PSPTO_2422 | PSPTO_2436 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2422 | 0 | 15 | -3.050020 | conserved protein of unknown function | |
PSPTO_2423 | 2 | 20 | -3.277735 | ABC transporter, periplasmic substrate-binding | |
PSPTO_2424 | 2 | 28 | -5.773716 | D-isomer specific 2-hydroxyacid dehydrogenase | |
PSPTO_2425 | 2 | 35 | -7.875848 | monooxygenase, NtaA/SnaA/SoxA family | |
PSPTO_2426 | 2 | 46 | -10.741453 | ISPssy, transposase | |
PSPTO_2427 | 2 | 46 | -10.741453 | serine hydroxymethyltransferase, putative | |
PSPTO_2428 | 3 | 46 | -11.351299 | multidrug resistance protein NorM, putative | |
PSPTO_2429 | 4 | 46 | -11.660306 | capK domain protein | |
PSPTO_2430 | 4 | 48 | -10.819568 | pyridoxal-phosphate dependent enzyme family | |
PSPTO_2431 | 4 | 46 | -10.470059 | conserved hypothetical protein | |
PSPTO_2432 | 2 | 34 | -7.397401 | ISPssy, transposase | |
PSPTO_2433 | 1 | 43 | -8.029137 | hypothetical protein | |
PSPTO_2434 | 1 | 38 | -6.500115 | D-isomer specific 2-hydroxyacid dehydrogenase | |
PSPTO_2435 | 0 | 34 | -5.106611 | oxidoreductase, FAD-binding, putative | |
PSPTO_2436 | 0 | 20 | -3.609269 | ISPsy5, Orf1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2422 | RTXTOXIND | 43 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
43 | PSPTO_2452 | PSPTO_2464 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2452 | 0 | 20 | -3.864632 | sarcosine oxidase, beta subunit | |
PSPTO_2453 | 1 | 32 | -6.638895 | methylenetetrahydrofolate | |
PSPTO_2454 | 1 | 32 | -7.104558 | formyltetrahydrofolate deformylase | |
PSPTO_2455 | 3 | 40 | -8.358807 | hypothetical protein | |
PSPTO_2456 | 1 | 22 | -5.405062 | hypothetical protein | |
PSPTO_2457 | -1 | 17 | -4.821692 | protein of unknown function | |
PSPTO_2458 | -2 | 11 | -3.248625 | conserved protein of unknown function | |
PSPTO_2460 | -2 | 10 | -1.864679 | ISPsy5, transposase | |
PSPTO_2461 | -2 | 11 | -0.904368 | ISPsy5, Orf1 | |
PSPTO_2463 | -1 | 11 | -0.385581 | TonB-dependent siderophore receptor, putative | |
PSPTO_2464 | 2 | 18 | -0.870427 | Mn2+/Fe2+ transporter, NRAMP family |
44 | PSPTO_2515 | PSPTO_2520 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2515 | 0 | 14 | 3.271339 | lipoprotein, putative | |
PSPTO_2516 | 1 | 13 | 3.751013 | molybdenum cofactor biosynthesis protein A | |
PSPTO_2517 | 1 | 14 | 3.811133 | sodium/hydrogen exchanger family protein | |
PSPTO_2518 | -1 | 13 | 3.633883 | bacterial extracellular solute-binding domain | |
PSPTO_2519 | 0 | 12 | 3.851436 | oxidoreductase, FAD-binding protein | |
PSPTO_2520 | 0 | 13 | 3.504904 | pyridine nucleotide-disulfide oxidoreductase |
45 | PSPTO_2530 | PSPTO_2546 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2530 | -2 | 11 | -3.002252 | hypothetical protein | |
PSPTO_2531 | -2 | 11 | -3.007586 | protein of unknown function | |
PSPTO_2532 | -1 | 13 | -3.300602 | membrane protein, TerC family | |
PSPTO_2533 | -1 | 16 | -3.307007 | acetyltransferase, GNAT family | |
PSPTO_2534 | -1 | 19 | -4.168293 | hypothetical protein | |
PSPTO_2535 | -1 | 18 | -3.797880 | conserved hypothetical protein | |
PSPTO_2536 | 0 | 21 | -4.907148 | hypothetical protein | |
PSPTO_2537 | 0 | 22 | -5.600055 | conserved domain protein | |
PSPTO_2538 | 0 | 22 | -5.731316 | Rhs element Vgr protein | |
PSPTO_2539 | 1 | 28 | -7.131904 | secreted protein Hcp | |
PSPTO_2541 | 1 | 28 | -6.299335 | ISPssy, transposase | |
PSPTO_2543 | 0 | 25 | -5.027309 | conserved hypothetical protein | |
PSPTO_2544 | -1 | 24 | -4.330475 | conserved hypothetical protein | |
PSPTO_2545 | -1 | 25 | -3.782374 | conserved hypothetical protein | |
PSPTO_2546 | -1 | 25 | -3.592558 | conserved hypothetical protein |
46 | PSPTO_2557 | PSPTO_2573 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2557 | -2 | 16 | 3.037347 | phosphonates ABC transporter, permease protein | |
PSPTO_2558 | -2 | 16 | 3.418471 | transcriptional regulator PhnF | |
PSPTO_2559 | -1 | 16 | 3.525319 | phosphonate metabolism protein PhnG | |
PSPTO_2560 | 1 | 15 | 2.974526 | PhnH protein | |
PSPTO_2561 | 2 | 15 | 2.661992 | phosphonate metabolism protein PhnI | |
PSPTO_2562 | 2 | 14 | 2.856501 | phosphonate metabolism protein PhnJ | |
PSPTO_2563 | 2 | 14 | 3.493020 | phosphonate ABC transporter, ATP-binding | |
PSPTO_2564 | 1 | 15 | 3.636061 | phosphonate ABC transporter, ATP-binding | |
PSPTO_2565 | 0 | 14 | 3.571839 | phosphonate metabolism protein PhnM | |
PSPTO_2566 | 0 | 14 | 4.042690 | ATP-binding protein PhnN | |
PSPTO_2567 | -1 | 17 | 4.125363 | phosphonate metabolism protein, PhnP | |
PSPTO_2568 | -1 | 17 | 3.985619 | glucose dehydrogenase | |
PSPTO_2569 | -1 | 21 | 3.997960 | amidase family protein | |
PSPTO_2570 | 0 | 20 | 3.790167 | peptidase, M20/M25/M40 family | |
PSPTO_2571 | -1 | 23 | 3.203535 | peptidase, M20/M25/M40 family | |
PSPTO_2572 | -1 | 22 | 2.769349 | peptide ABC transporter, ATP-binding protein | |
PSPTO_2573 | -1 | 20 | 3.079056 | peptide ABC transporter, ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2564 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
47 | PSPTO_2592 | PSPTO_2602 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2592 | -1 | 14 | 3.617734 | aliphatic isothiocyanate resistance protein | |
PSPTO_2593 | 0 | 14 | 4.371940 | multidrug resistance protein, AcrA/AcrE family | |
PSPTO_2594 | 2 | 16 | 4.609563 | transcriptional regulatory protein NfxB | |
PSPTO_2595 | 3 | 15 | 4.991509 | isochorismate synthase | |
PSPTO_2596 | 4 | 15 | 5.030537 | isochorismate pyruvate-lyase | |
PSPTO_2597 | 4 | 14 | 4.844567 | yersiniabactin synthetase, salicylate ligase | |
PSPTO_2598 | 4 | 14 | 4.555012 | yersiniabactin synthetase, thioesterase | |
PSPTO_2599 | 4 | 14 | 4.443804 | yersiniabactin synthetase, thiazolinyl reductase | |
PSPTO_2600 | 4 | 14 | 4.059019 | yersiniabactin polyketide/non-ribosomal peptide | |
PSPTO_2601 | 2 | 14 | 3.176246 | membrane protein, putative | |
PSPTO_2602 | 1 | 14 | 3.216776 | yersiniabactin non-ribosomal peptide synthetase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2592 | ACRIFLAVINRP | 1134 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2593 | RTXTOXIND | 41 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2594 | HTHTETR | 32 | 7e-04 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2602 | ISCHRISMTASE | 62 | 9e-12 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. |
48 | PSPTO_2789 | PSPTO_2862 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2789 | 0 | 11 | 3.038468 | hypothetical protein | |
PSPTO_2790 | -1 | 13 | 3.699989 | conserved hypothetical protein | |
PSPTO_2791 | -1 | 13 | 4.082371 | oxidoreductase, aldo/keto reductase family | |
PSPTO_2792 | -1 | 16 | 4.405236 | LexA repressor | |
PSPTO_2793 | -1 | 16 | 3.905186 | conserved hypothetical protein | |
PSPTO_2794 | 0 | 16 | 3.313739 | conserved hypothetical protein | |
PSPTO_2795 | -1 | 17 | 2.439011 | DNA polymerase III, alpha subunit, putative | |
PSPTO_2796 | 1 | 16 | 1.781192 | conserved hypothetical protein | |
PSPTO_2797 | 0 | 16 | 2.003423 | hypothetical protein | |
PSPTO_2798 | 0 | 15 | 2.213635 | transporter, putative | |
PSPTO_2799 | 0 | 14 | 2.583905 | conserved hypothetical protein | |
PSPTO_2800 | -1 | 14 | 3.055944 | polysaccharide deacetylase family protein | |
PSPTO_2801 | -1 | 14 | 3.002424 | prolidase, putative | |
PSPTO_2802 | -1 | 13 | 2.108340 | proline/betaine transporter | |
PSPTO_2803 | -1 | 14 | 2.067507 | transcriptional regulator, LysR family | |
PSPTO_2804 | -2 | 13 | 2.469601 | transcriptional regulator, LysR family | |
PSPTO_2805 | -2 | 13 | 2.450397 | oxidoreductase, FAD-binding, putative | |
PSPTO_2806 | -1 | 11 | 1.925828 | dienelactone hydrolase family protein | |
PSPTO_2807 | 1 | 13 | 2.386343 | GGDEF domain protein | |
PSPTO_2808 | 0 | 16 | 3.232366 | transcriptional regulator, LysR family | |
PSPTO_2809 | 0 | 17 | 3.376535 | conserved hypothetical protein | |
PSPTO_2810 | 1 | 17 | 2.739268 | peptide ABC transporter, permease protein | |
PSPTO_2811 | 1 | 16 | 2.855479 | peptide ABC transporter, permease protein | |
PSPTO_2812 | 2 | 14 | 2.726376 | peptide ABC transporter, ATP-binding protein | |
PSPTO_2814 | 1 | 10 | 1.846164 | peptide ABC transporter, periplasmic | |
PSPTO_2815 | 2 | 13 | 2.372885 | conserved hypothetical protein | |
PSPTO_2816 | 2 | 14 | 3.121082 | alkylhydroperoxidase AhpD domain protein | |
PSPTO_2817 | 2 | 14 | 3.102207 | conserved domain protein | |
PSPTO_2818 | 2 | 15 | 2.685340 | fatty acid desaturase | |
PSPTO_2819 | 1 | 13 | 2.605822 | conserved protein of unknown function | |
PSPTO_2820 | 2 | 15 | 2.698616 | protein of unknown function | |
PSPTO_2821 | 2 | 16 | 2.170712 | hypothetical protein | |
PSPTO_2822 | 3 | 17 | 1.339955 | conserved hypothetical protein | |
PSPTO_2823 | 3 | 18 | 1.496104 | hypothetical protein | |
PSPTO_2824 | 2 | 11 | 3.479684 | auxin-responsive GH3-related protein | |
PSPTO_2825 | 2 | 13 | 4.472450 | iron-sulfur cluster-binding protein, Rieske | |
PSPTO_2826 | 1 | 13 | 4.513310 | conserved domain protein | |
PSPTO_2827 | 1 | 13 | 4.413274 | conserved domain protein | |
PSPTO_2828 | 1 | 12 | 4.314631 | transcriptional regulator SyrR | |
PSPTO_2829 | 1 | 11 | 4.164255 | non-ribosomal peptide synthetase SyfA | |
PSPTO_2830 | 1 | 12 | 4.131233 | non-ribosomal peptide synthetase SyfB | |
PSPTO_2831 | -2 | 13 | -0.158875 | syringafactin efflux protein SyfC | |
PSPTO_2832 | -1 | 15 | -1.001926 | syringafactin efflux protein SyfD | |
PSPTO_2833 | 1 | 27 | -3.812034 | transcriptional regulator, LuxR family | |
PSPTO_2834 | 0 | 23 | -3.883519 | beta-lactamase | |
PSPTO_2835 | 0 | 16 | -2.317409 | conserved domain protein | |
PSPTO_2836 | 0 | 15 | -1.416451 | ISPssy, transposase | |
PSPTO_2838 | -1 | 16 | -0.857662 | conserved domain protein | |
PSPTO_2839 | 0 | 18 | -0.703989 | ISPsy5, Orf1 | |
PSPTO_2840 | 0 | 18 | -0.177586 | ISPsy5, transposase | |
PSPTO_2841 | 1 | 19 | -0.422299 | ISPsy14, transposase | |
PSPTO_2842 | 1 | 22 | -1.258536 | ISPsy14, transposition helper protein | |
PSPTO_2843 | 2 | 29 | -2.776492 | conserved protein of unknown function | |
PSPTO_2844 | 2 | 29 | -3.075502 | conserved protein of unknown function | |
PSPTO_2845 | 2 | 29 | -3.997328 | conserved protein of unknown function | |
PSPTO_2846 | 3 | 30 | -4.173648 | TonB-dependent siderophore receptor, putative | |
PSPTO_2847 | 2 | 27 | -3.853442 | ThiJ/PfpI family protein | |
PSPTO_2849 | 3 | 30 | -4.913794 | cytochrome c family protein | |
PSPTO_2850 | 4 | 31 | -5.753735 | conserved protein of unknown function | |
PSPTO_2851 | 4 | 31 | -5.677917 | SCO1/SenC family protein | |
PSPTO_2852 | 4 | 31 | -5.412179 | conserved protein of unknown function | |
PSPTO_2853 | 3 | 31 | -4.762438 | TonB-dependent receptor, putative | |
PSPTO_2855 | 4 | 32 | -5.024691 | DNA-binding protein | |
PSPTO_2856 | 3 | 31 | -4.821392 | site-specific recombinase, phage integrase | |
PSPTO_2857 | 2 | 29 | -3.509455 | site-specific recombinase, phage integrase | |
PSPTO_2858 | 1 | 28 | -3.115659 | hypothetical protein | |
PSPTO_2859 | 1 | 28 | -2.980805 | conserved protein of unknown function | |
PSPTO_2860 | 0 | 28 | -3.135291 | helicase domain protein | |
PSPTO_2861 | -1 | 31 | -3.392103 | 4Fe-4S binding domain protein | |
PSPTO_2862 | 0 | 30 | -3.280601 | oxidoreductase, molybdopterin-binding subunit |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2802 | TCRTETA | 43 | 1e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2809 | PF07328 | 33 | 0.001 | T-DNA border endonuclease VirD1 | |
>PF07328#T-DNA border endonuclease VirD1 | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2831 | RTXTOXIND | 52 | 2e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
49 | PSPTO_2874 | PSPTO_2894 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2874 | 2 | 14 | 1.337379 | ppkA-related protein | |
PSPTO_2875 | 3 | 15 | 1.682078 | ABC transporter, ATP-binding protein | |
PSPTO_2876 | 3 | 16 | 1.500634 | ABC transporter, permease protein, putative | |
PSPTO_2877 | 1 | 13 | -0.284930 | conserved protein of unknown function | |
PSPTO_2878 | 0 | 15 | -1.225836 | lipoprotein, putative | |
PSPTO_2879 | -2 | 18 | -2.268318 | lipoprotein, putative | |
PSPTO_2880 | -2 | 21 | -2.910050 | conserved hypothetical protein | |
PSPTO_2881 | 1 | 26 | -5.095502 | hypothetical protein | |
PSPTO_2883 | 1 | 26 | -4.961328 | methyl-accepting chemotaxis protein | |
PSPTO_2885 | 1 | 21 | -4.002546 | ISPsy5, Orf1 | |
PSPTO_2887 | 0 | 19 | -3.319244 | ISPssy, transposase | |
PSPTO_2888 | 0 | 19 | -3.131809 | conserved domain protein | |
PSPTO_2889 | 1 | 24 | -5.746073 | hypothetical protein | |
PSPTO_2890 | 0 | 23 | -5.167449 | hypothetical protein | |
PSPTO_2891 | 0 | 20 | -5.001781 | UDP-glucose 6-dehydrogenase | |
PSPTO_2892 | 0 | 24 | -5.102292 | hypothetical protein | |
PSPTO_2893 | 0 | 22 | -4.675790 | PAP2 superfamily protein | |
PSPTO_2894 | -1 | 20 | -4.071755 | lectin repeat domain protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2874 | LUXSPROTEIN | 31 | 0.008 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2879 | RTXTOXIND | 28 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
50 | PSPTO_2954 | PSPTO_2965 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2954 | -1 | 12 | 3.336681 | ThiJ/PfpI family protein | |
PSPTO_2955 | -1 | 12 | 3.375767 | transcriptional regulator, AraC family | |
PSPTO_2956 | -1 | 13 | 3.421500 | esterase | |
PSPTO_2957 | 0 | 13 | 3.448135 | methanol dehydrogenase, NAD-dependent | |
PSPTO_2958 | 0 | 14 | 3.797713 | threonine efflux protein | |
PSPTO_2959 | 0 | 13 | 3.992198 | conserved hypothetical protein | |
PSPTO_2960 | 0 | 12 | 3.500512 | pyridoxal-phosphate dependent enzyme | |
PSPTO_2961 | 1 | 12 | 3.298619 | L-lysine 6-monooxygenase, putative | |
PSPTO_2962 | 2 | 12 | 3.323520 | conserved hypothetical protein | |
PSPTO_2963 | 1 | 14 | 2.939366 | oxidoreductase, FAD-binding protein | |
PSPTO_2964 | 2 | 15 | 1.915445 | conserved hypothetical protein | |
PSPTO_2965 | 2 | 18 | -0.152772 | conserved hypothetical protein |
51 | PSPTO_3089 | PSPTO_3101 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3089 | 5 | 16 | 1.671742 | nickel ABC transporter, permease protein | |
PSPTO_3090 | 5 | 18 | 1.490134 | nickel ABC transporter, permease protein, | |
PSPTO_3091 | 6 | 19 | 0.220438 | nickel ABC transporter, ATP-binding protein, | |
PSPTO_3092 | 6 | 15 | -1.405602 | conserved protein of unknown function | |
PSPTO_5642 | 6 | 14 | -0.706891 | protein of unknown function | |
PSPTO_5643 | 1 | 12 | 0.379027 | protein of unknown function | |
PSPTO_3094 | -1 | 13 | 1.403500 | lipoprotein, putative | |
PSPTO_3096 | 0 | 11 | 1.415401 | conserved domain protein | |
PSPTO_3098 | 0 | 11 | 1.353543 | methyl-accepting chemotaxis protein | |
PSPTO_3099 | 0 | 13 | 1.913030 | multidrug efflux RND membrane fusion protein | |
PSPTO_3100 | 0 | 12 | 1.387252 | aliphatic isothiocyanate resistance protein | |
PSPTO_3101 | 3 | 14 | 1.402270 | outer membrane efflux protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3091 | HTHFIS | 31 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3098 | RTXTOXIND | 32 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3099 | RTXTOXIND | 57 | 6e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3100 | ACRIFLAVINRP | 1091 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3101 | RTXTOXIND | 31 | 0.011 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
52 | PSPTO_3203 | PSPTO_3228 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3203 | -2 | 18 | -3.370594 | conserved hypothetical protein | |
PSPTO_3204 | 0 | 22 | -4.183508 | conserved hypothetical protein | |
PSPTO_3205 | 1 | 23 | -4.798345 | dehydrogenase, isocitrate/isopropylmalate | |
PSPTO_3207 | 1 | 23 | -5.260452 | transcriptional regulator, LysR family | |
PSPTO_3208 | 1 | 24 | -5.795045 | ISPssy, transposase | |
PSPTO_3210 | 1 | 23 | -5.281133 | filamentous hemagglutinin family protein | |
PSPTO_3211 | 2 | 26 | -6.319167 | conserved hypothetical protein | |
PSPTO_3212 | 1 | 27 | -5.199884 | ISPsy5, Orf1 | |
PSPTO_3213 | 2 | 26 | -4.703404 | ISPsy5, transposase | |
PSPTO_3215 | 2 | 24 | -4.399657 | ISPsy5, Orf1 | |
PSPTO_3216 | 2 | 23 | -3.911554 | ISPsy5, transposase | |
PSPTO_3217 | 2 | 26 | -4.463465 | protein of unknown function | |
PSPTO_3218 | 2 | 22 | -3.535385 | protein of unknown function | |
PSPTO_3219 | 1 | 16 | -1.754842 | hypothetical protein | |
PSPTO_3220 | 2 | 17 | -1.707595 | ISPsy5, transposase | |
PSPTO_3221 | 2 | 22 | -3.020145 | ISPsy5, Orf1 | |
PSPTO_3222 | 2 | 25 | -2.767564 | hypothetical protein | |
PSPTO_3223 | 3 | 26 | -2.726651 | IS52, transposase | |
PSPTO_3224 | 2 | 12 | 0.301498 | ISPsy4, transposase | |
PSPTO_3225 | 2 | 11 | 0.403292 | ISPsy4, transposition helper protein | |
PSPTO_3226 | 2 | 11 | 0.546026 | conserved protein of unknown function | |
PSPTO_3227 | 2 | 11 | 0.724047 | conserved domain protein | |
PSPTO_3228 | 2 | 10 | 0.779135 | protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3224 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
53 | PSPTO_3307 | PSPTO_3320 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3307 | 2 | 14 | 3.058803 | general secretion pathway protein D | |
PSPTO_3308 | 4 | 15 | 3.943803 | general secretion pathway protein N, putative | |
PSPTO_3309 | 2 | 16 | 3.447611 | general secretion pathway protein M, putative | |
PSPTO_3310 | 2 | 17 | 2.713785 | general secretion pathway protein L, putative | |
PSPTO_3311 | 0 | 16 | 2.672067 | general secretion pathway protein K, putative | |
PSPTO_3312 | -3 | 12 | 3.000474 | general secretion pathway protein J, putative | |
PSPTO_3313 | -1 | 16 | 1.603394 | general secretion pathway protein I, putative | |
PSPTO_3314 | -1 | 16 | 1.409533 | general secretion pathway protein H | |
PSPTO_3315 | -2 | 15 | 1.399149 | general secretion pathway protein G | |
PSPTO_3316 | -2 | 14 | 1.554825 | general secretion pathway protein F | |
PSPTO_3317 | -1 | 15 | 1.581872 | general secretion pathway protein E | |
PSPTO_3318 | 1 | 16 | 1.901994 | beta-glucosidase | |
PSPTO_3319 | 2 | 14 | 2.975744 | transcriptional regulator, TetR family | |
PSPTO_3320 | 2 | 11 | 1.336357 | membrane protein, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3307 | BCTERIALGSPD | 239 | 3e-71 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3312 | BCTERIALGSPG | 43 | 1e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3313 | BCTERIALGSPH | 34 | 6e-05 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3314 | BCTERIALGSPG | 40 | 4e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3315 | BCTERIALGSPG | 118 | 4e-37 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3316 | BCTERIALGSPF | 318 | e-108 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3318 | BINARYTOXINB | 53 | 6e-09 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3319 | HTHTETR | 92 | 3e-25 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
54 | PSPTO_3381 | PSPTO_3399 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3381 | 4 | 34 | -6.264593 | DNA-binding response regulator | |
PSPTO_3382 | 5 | 39 | -8.168758 | lipoprotein, putative | |
PSPTO_3383 | 5 | 37 | -7.435705 | conserved protein of unknown function | |
PSPTO_3384 | 5 | 36 | -6.972493 | hypothetical protein | |
PSPTO_3385 | 4 | 32 | -6.109139 | site-specific recombinase, phage integrase | |
PSPTO_3386 | 4 | 34 | -5.890684 | protein of unknown function | |
PSPTO_3387 | 0 | 23 | -2.625536 | conserved protein of unknown function | |
PSPTO_3388 | 1 | 16 | -0.241116 | DNA adenine methylase, putative | |
PSPTO_3389 | 1 | 15 | 0.215165 | lysozyme, putative | |
PSPTO_3390 | 3 | 15 | 0.294547 | tail protein D | |
PSPTO_3391 | 1 | 13 | 0.794075 | tail protein X | |
PSPTO_3392 | 0 | 13 | 0.811410 | conserved hypothetical protein | |
PSPTO_3393 | 0 | 15 | -0.068578 | tail tape measure protein | |
PSPTO_3394 | 1 | 17 | -0.669925 | conserved hypothetical protein | |
PSPTO_3395 | 1 | 17 | -0.419413 | major tail tube protein | |
PSPTO_3396 | 0 | 18 | -0.155251 | major tail sheath protein | |
PSPTO_3397 | 1 | 21 | -0.250215 | tail fiber assembly domain protein | |
PSPTO_3398 | 2 | 21 | -0.068379 | tail fiber protein H, putative | |
PSPTO_3399 | 4 | 19 | 1.517437 | tail protein I |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3381 | HTHFIS | 85 | 3e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3393 | PHAGEIV | 30 | 0.042 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. |
55 | PSPTO_3416 | PSPTO_3421 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3416 | 1 | 29 | -4.046851 | holin | |
PSPTO_3417 | 1 | 29 | -4.200925 | conserved hypothetical protein | |
PSPTO_3418 | 1 | 30 | -4.150662 | DNA primase domain protein | |
PSPTO_3419 | 1 | 38 | -5.806181 | C4-type zinc finger protein, DksA/TraR family | |
PSPTO_3420 | 1 | 35 | -5.680483 | hypothetical protein | |
PSPTO_3421 | 1 | 36 | -6.419844 | repressor protein c2 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3418 | PF05272 | 395 | e-127 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
56 | PSPTO_3467 | PSPTO_3488 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3467 | 1 | 12 | 3.113304 | sigma-54 dependent transcriptional regulator, | |
PSPTO_3468 | 2 | 14 | 3.332051 | conserved protein of unknown function | |
PSPTO_3469 | 2 | 14 | 2.686218 | DNA-binding protein | |
PSPTO_3470 | 3 | 15 | 2.436706 | membrane protein, putative | |
PSPTO_3471 | 3 | 16 | 2.774198 | monovalent cation:proton antiporter, putative | |
PSPTO_3472 | 4 | 17 | 1.172461 | potassium efflux system protein PhaC | |
PSPTO_3473 | 3 | 16 | 0.649197 | monovalent cation/proton antiporter, MnhD/PhaD | |
PSPTO_3474 | -1 | 16 | -2.627008 | potassium efflux system protein PhaE, putative | |
PSPTO_3475 | -1 | 16 | -0.994378 | potassium efflux system protein PhaF | |
PSPTO_3476 | -1 | 17 | -1.061355 | potassium efflux system protein PhaG | |
PSPTO_3477 | -1 | 22 | -3.071370 | protein of unknown function | |
PSPTO_3478 | 0 | 24 | -3.274986 | protein of unknown function | |
PSPTO_3479 | 0 | 25 | -3.760341 | conserved domain protein | |
PSPTO_3480 | 1 | 31 | -5.330705 | methyl-accepting chemotaxis protein | |
PSPTO_3481 | 3 | 36 | -7.589785 | hypothetical protein | |
PSPTO_3482 | 3 | 34 | -7.203731 | Rhs element Vgr protein | |
PSPTO_3483 | 2 | 28 | -6.087444 | hypothetical protein | |
PSPTO_3484 | 1 | 18 | -4.540073 | lipoprotein, putative | |
PSPTO_3485 | 0 | 15 | -3.729315 | lipase family protein | |
PSPTO_3486 | 3 | 12 | -0.712318 | hypothetical protein | |
PSPTO_3487 | 1 | 11 | 0.486109 | dnaK suppressor protein, putative | |
PSPTO_3488 | 2 | 11 | 0.197802 | sugar ABC transporter, permease protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3467 | HTHFIS | 372 | e-129 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3482 | ICENUCLEATIN | 39 | 8e-05 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. |
57 | PSPTO_3533 | PSPTO_3539 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3533 | 0 | 15 | 3.383847 | glycosyl transferase, group 1 family protein | |
PSPTO_3534 | 1 | 15 | 3.842373 | glycosyl hydrolase, family 5 PslG | |
PSPTO_3535 | 1 | 14 | 3.688668 | glycosyl transferase, group 1 family protein | |
PSPTO_3536 | 3 | 14 | 3.454460 | glycosyl transferase, group 1 family protein | |
PSPTO_3537 | 3 | 14 | 3.138341 | membrane protein PslJ | |
PSPTO_3538 | 3 | 15 | 3.397033 | bacterial transferase, hexapeptide repeat | |
PSPTO_3539 | 3 | 14 | 3.021637 | membrane protein PslK |
58 | PSPTO_3598 | PSPTO_3650 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3598 | 2 | 21 | 1.244721 | dyp-type peroxidase family protein | |
PSPTO_3599 | 0 | 18 | 1.119865 | conserved domain protein | |
PSPTO_3600 | -2 | 15 | 0.758031 | oxidoreductase, molybdopterin-binding protein | |
PSPTO_3601 | -1 | 16 | 0.171154 | conserved hypothetical protein | |
PSPTO_3602 | -2 | 14 | 0.045740 | conserved protein of unknown function | |
PSPTO_3603 | -2 | 14 | 0.182483 | DNA-binding heavy metal response regulator | |
PSPTO_3604 | 0 | 16 | -2.500622 | heavy metal sensor histidine kinase | |
PSPTO_3605 | 2 | 32 | -7.018123 | lyase, putative | |
PSPTO_3606 | 2 | 36 | -7.718705 | hypothetical protein | |
PSPTO_3607 | 1 | 29 | -6.489483 | ISPsy4, transposition helper protein | |
PSPTO_3608 | 0 | 36 | -7.861312 | ISPsy4, transposase | |
PSPTO_3609 | 1 | 43 | -9.852404 | site-specific recombinase, phage integrase | |
PSPTO_3610 | 0 | 41 | -8.678277 | hypothetical protein | |
PSPTO_3612 | -1 | 24 | -4.405877 | ISPsy5, Orf1 | |
PSPTO_3613 | 0 | 22 | -3.978728 | ISPsy5, transposase | |
PSPTO_3615 | -1 | 20 | -2.992684 | site-specific recombinase, phage integrase | |
PSPTO_3616 | -1 | 12 | 0.629170 | protein of unknown function | |
PSPTO_3617 | 2 | 15 | 2.663995 | transcriptional regulator, MarR family | |
PSPTO_3618 | 1 | 17 | 2.020279 | membrane protein, putative | |
PSPTO_3619 | 2 | 18 | 1.820887 | membrane protein, putative | |
PSPTO_3620 | 0 | 17 | 1.849615 | HlyD family secretion protein | |
PSPTO_3621 | -1 | 15 | 1.205575 | outer membrane efflux protein | |
PSPTO_3624 | 0 | 15 | 1.362754 | ion transport protein, putative | |
PSPTO_3625 | 0 | 17 | 2.091238 | sulfate ABC transporter, periplasmic | |
PSPTO_3626 | 1 | 17 | 2.851643 | lipoprotein, putative | |
PSPTO_3628 | 2 | 19 | 2.532400 | cytochrome c-type biogenesis protein CycL | |
PSPTO_3629 | 2 | 19 | 3.215763 | thiol:disulfide interchange protein DsbE | |
PSPTO_3630 | 2 | 18 | 3.832272 | cytochrome c-type biogenesis protein CcmF | |
PSPTO_3631 | 4 | 17 | 3.964674 | cytochrome c-type biogenesis protein CcmE | |
PSPTO_3632 | 3 | 18 | 4.322446 | heme exporter protein CcmD | |
PSPTO_3633 | 3 | 18 | 4.746320 | heme exporter protein CcmC | |
PSPTO_3634 | 3 | 17 | 5.270516 | heme exporter protein CcmB | |
PSPTO_3635 | 4 | 16 | 4.775283 | heme exporter protein CcmA | |
PSPTO_3636 | 3 | 17 | 4.544828 | conserved protein of unknown function | |
PSPTO_3637 | 3 | 16 | 4.522145 | FlhB domain protein | |
PSPTO_3638 | 3 | 15 | 4.235150 | recombination protein RecR | |
PSPTO_3639 | 4 | 13 | 3.651775 | transcriptional regulator, LysR family | |
PSPTO_3640 | 2 | 12 | 3.774597 | conserved hypothetical protein | |
PSPTO_3641 | 0 | 11 | 3.297651 | endoribonuclease L-PSP family protein | |
PSPTO_3643 | -2 | 12 | 3.166784 | acetyltransferase, GNAT family | |
PSPTO_3644 | -1 | 11 | 2.227274 | aldehyde dehydrogenase family protein | |
PSPTO_3645 | -1 | 10 | -1.330251 | conserved protein of unknown function | |
PSPTO_3646 | -1 | 10 | -1.634839 | DNA polymerase III, subunits gamma and tau | |
PSPTO_3647 | 0 | 15 | -4.152458 | conserved hypothetical protein | |
PSPTO_3648 | 0 | 16 | -4.382044 | acid phosphatase | |
PSPTO_3649 | 0 | 22 | -5.311857 | mechanosensitive ion channel family protein | |
PSPTO_3650 | 1 | 16 | -3.191992 | protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3603 | HTHFIS | 77 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3608 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3620 | RTXTOXIND | 54 | 2e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3636 | VACCYTOTOXIN | 33 | 0.001 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3637 | TYPE3IMSPROT | 66 | 4e-16 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3640 | ALARACEMASE | 36 | 3e-04 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3643 | SACTRNSFRASE | 36 | 4e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3646 | PF03544 | 51 | 4e-09 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein |
59 | PSPTO_3721 | PSPTO_3730 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3721 | 2 | 17 | -2.103610 | enoyl-(acyl-carrier-protein) reductase | |
PSPTO_3722 | 3 | 19 | -2.798367 | peptidyl-prolyl cis-trans isomerase D, putative | |
PSPTO_3723 | 2 | 20 | -2.772153 | DNA-binding protein HU-beta | |
PSPTO_3724 | 1 | 18 | -3.333624 | ATP-dependent protease La | |
PSPTO_3725 | 0 | 22 | -5.890135 | ATP-dependent Clp protease, ATP-binding subunit | |
PSPTO_3726 | 0 | 23 | -6.623016 | ATP-dependent Clp protease, proteolytic subunit | |
PSPTO_3727 | 1 | 26 | -7.254194 | trigger factor | |
PSPTO_3728 | 1 | 25 | -6.185498 | hypothetical protein | |
PSPTO_3729 | 0 | 24 | -5.981261 | lipoprotein, putative | |
PSPTO_3730 | 0 | 16 | -4.509401 | membrane protein, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3721 | DHBDHDRGNASE | 60 | 7e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3722 | SECA | 29 | 0.046 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3723 | DNABINDINGHU | 116 | 7e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3724 | PF05272 | 30 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
60 | PSPTO_3758 | PSPTO_3766 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3758 | 2 | 15 | 4.453994 | conserved protein of unknown function | |
PSPTO_3759 | 2 | 17 | 4.677691 | moxR protein, putative | |
PSPTO_3760 | 2 | 17 | 4.770846 | conserved hypothetical protein | |
PSPTO_3761 | 5 | 17 | 4.045569 | conserved hypothetical protein | |
PSPTO_3762 | 4 | 16 | 3.672641 | von Willebrand factor type A domain protein | |
PSPTO_3763 | 4 | 15 | 2.952963 | TPR domain protein | |
PSPTO_3764 | 3 | 15 | 2.128125 | conserved hypothetical protein | |
PSPTO_3765 | 3 | 13 | 1.523441 | exonuclease SbcD | |
PSPTO_3766 | 2 | 12 | 0.889352 | exonuclease SbcC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3759 | HTHFIS | 28 | 0.048 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3763 | PF05616 | 32 | 0.005 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3766 | GPOSANCHOR | 52 | 7e-09 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
61 | PSPTO_3836 | PSPTO_3843 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3836 | 3 | 16 | 1.071210 | conserved protein of unknown function | |
PSPTO_3837 | 3 | 17 | 1.267379 | maf protein | |
PSPTO_3838 | 2 | 16 | 1.245865 | signal peptide peptidase SppA, 36K type | |
PSPTO_3839 | 3 | 17 | 1.694831 | HAD-superfamily hydrolase | |
PSPTO_3840 | 2 | 18 | 2.007373 | ribosomal large subunit pseudouridine synthase | |
PSPTO_3841 | 2 | 18 | 1.991494 | ribonuclease, Rne/Rng family protein | |
PSPTO_3842 | 0 | 15 | 1.371305 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
PSPTO_3843 | 1 | 14 | 3.329529 | 3-deoxy-D-manno-octulosonate |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3837 | OMPADOMAIN | 31 | 0.003 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3841 | IGASERPTASE | 67 | 5e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
62 | PSPTO_3923 | PSPTO_3945 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3923 | 0 | 24 | -6.403818 | membrane protein, putative | |
PSPTO_3924 | 2 | 28 | -6.208833 | malate dehydrogenase | |
PSPTO_3925 | 5 | 44 | -8.486414 | gas vesicle protein, putative | |
PSPTO_3927 | 5 | 43 | -7.442315 | protein of unknown function | |
PSPTO_3929 | 5 | 42 | -7.694921 | cold shock domain family protein | |
PSPTO_3930 | 6 | 40 | -7.404057 | retron reverse transcriptase | |
PSPTO_3931 | 1 | 26 | -2.354973 | hypothetical protein | |
PSPTO_3932 | 2 | 30 | -3.686001 | conserved hypothetical protein | |
PSPTO_3933 | 3 | 33 | -5.140616 | lysozyme, putative | |
PSPTO_3934 | 2 | 33 | -5.519139 | tail fiber assembly domain protein | |
PSPTO_3935 | 3 | 32 | -5.230836 | conserved hypothetical protein | |
PSPTO_3936 | 3 | 30 | -3.850680 | tail fiber domain protein | |
PSPTO_3937 | 2 | 27 | -3.460321 | conserved hypothetical protein | |
PSPTO_3938 | 2 | 21 | -2.031952 | hypothetical protein | |
PSPTO_3942 | 0 | 17 | -1.009066 | hypothetical protein | |
PSPTO_3943 | -1 | 19 | -0.703129 | carbon storage regulator, putative | |
PSPTO_3944 | 1 | 23 | -1.744422 | hypothetical protein | |
PSPTO_3945 | 2 | 17 | -2.364026 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3931 | YERSSTKINASE | 26 | 0.006 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3932 | PYOCINKILLER | 27 | 0.044 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. |
63 | PSPTO_3959 | PSPTO_3982 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3959 | 1 | 17 | -4.071013 | quinolinate synthetase complex, subunit A | |
PSPTO_3960 | 3 | 24 | -5.360802 | polygalacturonase | |
PSPTO_3961 | 3 | 29 | -6.282057 | hypothetical protein | |
PSPTO_3962 | 1 | 24 | -4.849792 | hypothetical protein | |
PSPTO_3963 | 0 | 22 | -3.914363 | ISPssy, transposase | |
PSPTO_3965 | 0 | 22 | -3.448817 | hypothetical protein | |
PSPTO_3966 | 1 | 19 | -1.783932 | ISPsy5, Orf1 | |
PSPTO_3968 | 1 | 21 | -2.242291 | *exsB protein | |
PSPTO_3969 | 1 | 23 | -2.985761 | radical SAM domain protein | |
PSPTO_3970 | 1 | 25 | -3.068914 | conserved protein of unknown function | |
PSPTO_3971 | 2 | 25 | -3.481741 | peptidoglycan-associated lipoprotein | |
PSPTO_3972 | 0 | 21 | -2.763930 | tolB protein | |
PSPTO_3973 | 2 | 21 | -2.178420 | tolA protein | |
PSPTO_3974 | 0 | 20 | -0.465449 | tolR protein | |
PSPTO_3975 | 1 | 20 | -0.213444 | tolQ protein | |
PSPTO_3976 | 3 | 16 | 0.037924 | conserved protein of unknown function | |
PSPTO_3977 | 3 | 17 | -0.051929 | Holliday junction DNA helicase RuvB | |
PSPTO_3978 | 2 | 17 | -1.154191 | Holliday junction DNA helicase RuvA | |
PSPTO_3979 | 3 | 17 | -1.327156 | crossover junction endodeoxyribonuclease RuvC | |
PSPTO_3980 | 3 | 18 | -2.117920 | conserved protein of unknown function | |
PSPTO_3981 | 2 | 17 | -2.380348 | aspartyl-tRNA synthetase | |
PSPTO_3982 | 1 | 22 | -4.787378 | conserved hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3971 | OMPADOMAIN | 113 | 5e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3973 | IGASERPTASE | 61 | 3e-12 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
64 | PSPTO_3992 | PSPTO_4013 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3992 | -2 | 12 | -3.237684 | conserved protein of unknown function | |
PSPTO_3993 | -1 | 16 | -4.580407 | potassium uptake protein | |
PSPTO_3994 | 1 | 22 | -5.958131 | conserved hypothetical protein | |
PSPTO_3995 | 1 | 28 | -7.471479 | abortive infection protein, internal deletion | |
PSPTO_3996 | -1 | 22 | -4.187731 | ISPsy5, transposase | |
PSPTO_3997 | -1 | 20 | -2.859195 | ISPsy5, Orf1 | |
PSPTO_3998 | -1 | 19 | -2.022423 | ISPsy5, Orf1 | |
PSPTO_3999 | 1 | 14 | -0.581776 | ISPsy5, transposase | |
PSPTO_4001 | 2 | 16 | 0.415711 | type III effector protein AvrPto1 | |
PSPTO_4003 | 2 | 17 | 1.365747 | conserved hypothetical protein | |
PSPTO_4004 | 2 | 15 | 0.733230 | conserved hypothetical protein | |
PSPTO_4005 | 2 | 17 | -0.771505 | hypothetical protein | |
PSPTO_4006 | 1 | 16 | -0.830507 | tail fiber protein H, putative | |
PSPTO_4007 | 3 | 30 | -1.869487 | conserved hypothetical protein | |
PSPTO_4008 | 3 | 30 | -1.988399 | hypothetical protein | |
PSPTO_4009 | 3 | 28 | -2.130894 | regulatory protein Cro | |
PSPTO_4010 | 3 | 27 | -1.955945 | repressor protein cI | |
PSPTO_4011 | 2 | 27 | -1.337567 | hypothetical protein | |
PSPTO_4012 | 2 | 30 | -1.889857 | hypothetical protein | |
PSPTO_4013 | 2 | 26 | -3.006400 | ISPsy4, transposase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3992 | PF06057 | 279 | 1e-94 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4013 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
65 | PSPTO_4034 | PSPTO_4067 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4034 | 2 | 25 | -1.267248 | cinA domain protein | |
PSPTO_4035 | 3 | 27 | -2.666467 | hypothetical protein | |
PSPTO_4036 | 1 | 21 | -1.333094 | conserved hypothetical protein | |
PSPTO_4037 | 1 | 21 | -1.783098 | lysozyme, putative | |
PSPTO_4038 | 2 | 21 | -1.912018 | tail fiber domain protein | |
PSPTO_4039 | 1 | 19 | -1.032930 | conserved domain protein | |
PSPTO_4040 | 1 | 18 | -0.553514 | conserved domain protein | |
PSPTO_4041 | -1 | 21 | -0.361199 | host specificity protein J, internal deletion | |
PSPTO_4042 | 3 | 25 | -1.210157 | conserved hypothetical protein | |
PSPTO_4043 | 3 | 25 | -1.341680 | hypothetical protein | |
PSPTO_4044 | 5 | 26 | -1.552567 | hypothetical protein | |
PSPTO_4045 | 4 | 23 | -1.343963 | protein of unknown function | |
PSPTO_4046 | 3 | 24 | -0.811521 | tail tape measure protein | |
PSPTO_4047 | 2 | 24 | -1.055736 | protein of unknown function | |
PSPTO_4048 | 2 | 23 | -0.281996 | conserved hypothetical protein | |
PSPTO_4049 | 1 | 19 | -0.115294 | conserved hypothetical protein | |
PSPTO_4050 | 2 | 19 | -0.304225 | hypothetical protein | |
PSPTO_4051 | 2 | 21 | -2.141016 | hypothetical protein | |
PSPTO_4052 | 3 | 22 | -2.955256 | hypothetical protein | |
PSPTO_4053 | 1 | 11 | -0.753661 | hypothetical protein | |
PSPTO_4054 | 1 | 10 | -0.822348 | hypothetical protein | |
PSPTO_4055 | 1 | 13 | -2.000099 | hypothetical protein | |
PSPTO_4056 | 1 | 12 | -1.651144 | hypothetical protein | |
PSPTO_4057 | -1 | 10 | -1.225245 | site-specific recombinase, phage integrase | |
PSPTO_4058 | -2 | 10 | -1.545520 | DNA mismatch repair protein MutS | |
PSPTO_4059 | -1 | 13 | -3.290246 | ferredoxin | |
PSPTO_4060 | -2 | 14 | -3.317676 | ISPsy6, transposase | |
PSPTO_4061 | -2 | 16 | -2.948643 | transcriptional regulator, LysR family | |
PSPTO_4062 | 0 | 17 | -4.858110 | mandelate racemase/muconate lactonizing enzyme | |
PSPTO_4063 | -1 | 21 | -4.725058 | C4-dicarboxylate transport protein | |
PSPTO_4064 | 0 | 27 | -5.018660 | transcriptional regulator, TetR family | |
PSPTO_4065 | 1 | 27 | -5.596744 | oxidoreductase, short-chain | |
PSPTO_4066 | 0 | 27 | -5.442660 | conserved domain protein | |
PSPTO_4067 | 0 | 25 | -4.385644 | oxidoreductase, short-chain |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4034 | BACINVASINB | 27 | 0.046 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4036 | PYOCINKILLER | 27 | 0.025 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4037 | RTXTOXINA | 28 | 0.024 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4054 | CHANNELTSX | 29 | 0.014 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4063 | TCRTETA | 29 | 0.034 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4064 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4065 | DHBDHDRGNASE | 72 | 3e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4067 | DHBDHDRGNASE | 94 | 1e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
66 | PSPTO_4182 | PSPTO_4200 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4182 | -1 | 17 | -4.176320 | D-alanine--D-alanine ligase | |
PSPTO_4183 | 1 | 22 | -6.704035 | ribosomal protein L31 | |
PSPTO_4184 | 1 | 26 | -8.807626 | hypothetical protein | |
PSPTO_4185 | 1 | 29 | -9.437770 | membrane protein, putative | |
PSPTO_4186 | 0 | 22 | -5.657712 | hypothetical protein | |
PSPTO_4187 | 0 | 19 | -4.015658 | hypothetical protein | |
PSPTO_4188 | -1 | 17 | -2.762515 | hypothetical protein | |
PSPTO_4189 | -1 | 16 | -1.817878 | hypothetical protein | |
PSPTO_4190 | -1 | 15 | -0.310407 | hypothetical protein | |
PSPTO_4191 | -1 | 14 | 1.699225 | conserved hypothetical protein | |
PSPTO_4192 | 0 | 15 | 1.685729 | conserved hypothetical protein | |
PSPTO_4193 | 1 | 14 | 2.072097 | iron utilization protein, putative | |
PSPTO_4194 | 0 | 13 | 2.371055 | conserved domain protein | |
PSPTO_4195 | 0 | 13 | 3.043959 | conserved hypothetical protein | |
PSPTO_4196 | 1 | 14 | 3.745832 | glucose dehydrogenase | |
PSPTO_4197 | 0 | 13 | 3.566752 | conserved hypothetical protein | |
PSPTO_4198 | 0 | 16 | 2.913678 | cobalamin synthesis protein/P47K family protein | |
PSPTO_4199 | -2 | 12 | 3.701489 | conserved hypothetical protein | |
PSPTO_4200 | -1 | 12 | 3.135235 | oxidoreductase, short chain |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4200 | DHBDHDRGNASE | 97 | 4e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
67 | PSPTO_4239 | PSPTO_4286 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4239 | -2 | 18 | 3.575410 | ABC transporter, permease protein | |
PSPTO_4240 | -2 | 13 | 2.765644 | ABC transporter, ATP-binding protein | |
PSPTO_4241 | -2 | 12 | 2.636054 | conserved hypothetical protein | |
PSPTO_4242 | -2 | 12 | 2.438235 | conserved hypothetical protein | |
PSPTO_4243 | -2 | 12 | 2.279956 | urea amidolyase-related protein | |
PSPTO_4244 | -1 | 11 | 0.417709 | amidase family protein | |
PSPTO_4245 | -1 | 12 | -1.264333 | hypothetical protein | |
PSPTO_4246 | 0 | 13 | -3.468630 | conserved hypothetical protein | |
PSPTO_4247 | 0 | 14 | -3.987485 | ribosomal small subunit pseudouridine synthase | |
PSPTO_4248 | 1 | 17 | -4.489335 | 3-hydroxyacyl-CoA-acyl carrier protein | |
PSPTO_4250 | 1 | 22 | -4.929789 | *DNA-binding protein | |
PSPTO_4251 | -1 | 21 | -4.505676 | ISPsy5, transposase | |
PSPTO_4252 | 1 | 24 | -5.286631 | ISPsy5, Orf1 | |
PSPTO_4253 | 0 | 25 | -5.495399 | ISPssy, transposase | |
PSPTO_4254 | 0 | 28 | -5.482109 | glutathione reductase | |
PSPTO_4255 | 0 | 31 | -6.116263 | carboxymuconolactone decarboxylase family | |
PSPTO_4256 | 0 | 32 | -6.726632 | NADH:flavin oxidoreductase/NADH oxidase family | |
PSPTO_4257 | 2 | 34 | -7.459336 | 4-oxalocrotonate tautomerase family protein | |
PSPTO_4258 | 1 | 31 | -6.969416 | NAD(P)H dehydrogenase, quinone family | |
PSPTO_4259 | 1 | 27 | -6.178986 | glutathione-regulated potassium-efflux system | |
PSPTO_4260 | 2 | 31 | -6.992664 | thioredoxin | |
PSPTO_4261 | 2 | 34 | -7.162375 | isomerase, putative | |
PSPTO_4262 | 3 | 32 | -7.200370 | transcriptional regulator, TetR family | |
PSPTO_4263 | 2 | 29 | -5.777051 | oxidoreductase, short chain | |
PSPTO_4264 | 2 | 30 | -5.204330 | conserved hypothetical protein | |
PSPTO_4265 | 4 | 34 | -6.889392 | cystathionine beta-lyase | |
PSPTO_4266 | 4 | 31 | -5.919020 | membrane protein, putative | |
PSPTO_4267 | 3 | 25 | -4.486380 | transcriptional regulator, TetR family | |
PSPTO_4269 | 3 | 25 | -3.784918 | ISPsy4, transposase | |
PSPTO_4270 | 2 | 26 | -4.222129 | ISPsy4, transposition helper protein | |
PSPTO_4272 | 2 | 28 | -4.767283 | protein of unknown function | |
PSPTO_4274 | 1 | 24 | -2.486199 | transcriptional regulator, TetR family | |
PSPTO_4275 | 0 | 22 | -2.255973 | oxidoreductase, short-chain | |
PSPTO_4276 | 0 | 23 | -2.567514 | transcriptional regulator, LysR family | |
PSPTO_4277 | 0 | 21 | -2.479715 | esterase/lipase/thioesterase family protein | |
PSPTO_4278 | 0 | 21 | -1.774644 | major facilitator family transporter | |
PSPTO_4279 | 2 | 16 | -0.361377 | conserved protein of unknown function | |
PSPTO_4280 | 2 | 13 | 0.010058 | membrane protein, putative | |
PSPTO_4281 | 1 | 10 | -0.697924 | conserved protein of unknown function | |
PSPTO_4282 | -2 | 11 | -2.613196 | hypothetical protein | |
PSPTO_4283 | -2 | 12 | -3.316270 | pectin lyase | |
PSPTO_4284 | -2 | 12 | -3.755632 | acetyltransferase, GNAT family | |
PSPTO_4285 | -1 | 12 | -3.378985 | alcohol dehydrogenase II | |
PSPTO_4286 | -1 | 9 | -3.030787 | conserved protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4240 | PF05272 | 28 | 0.030 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4243 | RTXTOXIND | 33 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4262 | HTHTETR | 57 | 2e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4263 | DHBDHDRGNASE | 102 | 4e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4267 | HTHTETR | 67 | 5e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4269 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4274 | HTHTETR | 46 | 3e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4275 | DHBDHDRGNASE | 42 | 8e-07 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4278 | TCRTETA | 56 | 9e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
68 | PSPTO_4318 | PSPTO_4327 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4318 | 2 | 20 | -1.785444 | integral membrane protein | |
PSPTO_4319 | 2 | 22 | -2.574264 | conserved hypothetical protein | |
PSPTO_4320 | 2 | 24 | -4.066765 | conserved hypothetical protein | |
PSPTO_4321 | 3 | 30 | -5.802416 | hypothetical protein | |
PSPTO_4322 | 3 | 31 | -6.215817 | hypothetical protein | |
PSPTO_4323 | 3 | 30 | -5.432309 | conserved protein of unknown function | |
PSPTO_4324 | 3 | 30 | -5.051214 | protein of unknown function | |
PSPTO_4325 | 3 | 29 | -5.053090 | protein of unknown function | |
PSPTO_4326 | 0 | 32 | -5.944014 | conserved hypothetical protein | |
PSPTO_4327 | 3 | 30 | -5.383375 | protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4323 | HTHTETR | 28 | 0.020 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
69 | PSPTO_4382 | PSPTO_4387 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4382 | 2 | 15 | -3.036367 | MGMT family protein | |
PSPTO_4383 | 3 | 16 | -3.159247 | ampG protein, putative | |
PSPTO_4384 | 4 | 18 | -3.911546 | protein of unknown function | |
PSPTO_4385 | 4 | 18 | -4.280387 | Rhs element Vgr protein | |
PSPTO_4386 | 3 | 20 | -4.913515 | protein of unknown function | |
PSPTO_4387 | 1 | 16 | -3.860851 | hypothetical protein |
70 | PSPTO_4415 | PSPTO_4428 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4415 | 2 | 14 | 1.394102 | cell division protein FtsL, putative | |
PSPTO_4416 | 1 | 14 | 1.167262 | S-adenosyl-methyltransferase MraW | |
PSPTO_4417 | 1 | 14 | 1.114797 | marZ family protein | |
PSPTO_4418 | 1 | 15 | 1.337856 | tetrapyrrole methylase family protein | |
PSPTO_4419 | 1 | 17 | 0.902400 | lipoprotein, putative | |
PSPTO_4420 | -1 | 15 | -1.674397 | conserved protein of unknown function | |
PSPTO_4421 | 1 | 17 | -1.912975 | phosphoheptose isomerase | |
PSPTO_4422 | 2 | 19 | -0.977855 | lipoprotein, putative | |
PSPTO_4423 | 2 | 18 | -1.331390 | stringent starvation protein B | |
PSPTO_4424 | 2 | 18 | -0.548933 | stringent starvation protein A | |
PSPTO_4425 | 2 | 17 | -0.244358 | ribosomal protein S9 | |
PSPTO_4426 | 1 | 16 | -0.125868 | ribosomal protein L13 | |
PSPTO_4427 | 1 | 16 | 0.293727 | transcriptional regulator, AraC family | |
PSPTO_4428 | 2 | 18 | -0.109799 | ATPase, putative |
71 | PSPTO_4438 | PSPTO_4457 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4438 | 2 | 17 | 1.290239 | histidinol dehydrogenase | |
PSPTO_4439 | 2 | 21 | -0.079466 | ATP phosphoribosyltransferase | |
PSPTO_4440 | 0 | 20 | -0.683737 | hypothetical protein | |
PSPTO_4441 | 0 | 19 | -0.877292 | UDP-N-acetylglucosamine | |
PSPTO_4442 | -1 | 18 | -1.199364 | toluene tolerance protein, putative | |
PSPTO_4443 | 1 | 14 | -0.379052 | STAS domain protein | |
PSPTO_4444 | 0 | 12 | -0.918920 | toluene tolerance protein, putative | |
PSPTO_4445 | 0 | 12 | -1.242024 | mce-related protein | |
PSPTO_4446 | 0 | 10 | -1.266429 | membrane protein, putative | |
PSPTO_4447 | 2 | 12 | -1.103663 | toluene tolerance ABC transporter, ATP-binding | |
PSPTO_4448 | 1 | 14 | -1.415368 | sugar isomerase, KpsF/GutQ | |
PSPTO_4449 | 2 | 15 | -2.546693 | phosphatase, YrbI family | |
PSPTO_4450 | 2 | 15 | -2.192626 | conserved protein of unknown function | |
PSPTO_4451 | 1 | 15 | -1.278923 | ostA family protein | |
PSPTO_4452 | 1 | 17 | -1.202097 | ABC transporter, ATP-binding protein | |
PSPTO_4453 | 0 | 15 | -1.289646 | RNA polymerase sigma-54 factor | |
PSPTO_4454 | -2 | 14 | -1.790402 | ribosomal subunit interface protein | |
PSPTO_4455 | -1 | 15 | -0.575925 | PTS IIA-like nitrogen-regulatory protein PtsN | |
PSPTO_4456 | 0 | 12 | 0.322334 | conserved hypothetical protein | |
PSPTO_4457 | 2 | 13 | 0.522607 | phosphocarrier protein HPr |
72 | PSPTO_4588 | PSPTO_4626 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4588 | -1 | 36 | -4.974325 | type III effector HopS2 | |
PSPTO_4589 | 0 | 36 | -5.726677 | type III chaperone ShcS2 | |
PSPTO_4590 | 0 | 35 | -6.190522 | type III effector HopT2 | |
PSPTO_4592 | 1 | 35 | -6.229076 | type III effector HopO1-3 | |
PSPTO_4593 | 0 | 32 | -5.841896 | type III effector HopT1-2 | |
PSPTO_4594 | 1 | 31 | -5.543072 | type III effector HopO1-2 | |
PSPTO_4595 | 0 | 24 | -3.329543 | protein of unknown function | |
PSPTO_4596 | 1 | 15 | -1.787641 | ISPssy, transposase | |
PSPTO_4597 | 0 | 14 | -2.254519 | type III effector HopS1 | |
PSPTO_4599 | 0 | 14 | -2.287378 | type III chaperone ShcS1 | |
PSPTO_4600 | 0 | 16 | -2.979425 | lipoprotein, putative | |
PSPTO_4601 | 0 | 18 | -3.647253 | transcription elongation factor GreB | |
PSPTO_4602 | 2 | 23 | -5.586185 | ABC transporter, ATP-binding protein | |
PSPTO_4603 | 2 | 29 | -5.937505 | site-specific recombinase, phage integrase | |
PSPTO_4604 | 2 | 30 | -5.843711 | site-specific recombinase, phage integrase | |
PSPTO_4605 | 3 | 30 | -6.522194 | conserved protein of unknown function | |
PSPTO_4606 | 2 | 31 | -7.034321 | conserved protein of unknown function | |
PSPTO_4607 | 1 | 30 | -6.405376 | protein of unknown function | |
PSPTO_4608 | 1 | 23 | -3.372491 | site-specific recombinase, phage integrase | |
PSPTO_4609 | 2 | 28 | -4.585508 | hypothetical protein | |
PSPTO_4610 | 2 | 26 | -4.891179 | conserved protein of unknown function | |
PSPTO_4611 | 1 | 27 | -5.006911 | conserved domain protein | |
PSPTO_4612 | 3 | 30 | -5.189324 | transcriptional regulator, LysR family | |
PSPTO_4613 | 3 | 29 | -5.378334 | C4-dicarboxylate transporter/malic acid | |
PSPTO_4614 | 4 | 32 | -5.422681 | conserved hypothetical protein | |
PSPTO_4615 | 5 | 31 | -5.463149 | inorganic pyrophosphatase | |
PSPTO_4616 | 4 | 32 | -5.126990 | enolase | |
PSPTO_4617 | 3 | 32 | -5.126294 | hypothetical protein | |
PSPTO_4618 | 2 | 33 | -4.934084 | hypothetical protein | |
PSPTO_4619 | 1 | 31 | -4.846167 | voltage-gated chloride channel family protein | |
PSPTO_4620 | 1 | 29 | -4.293505 | conserved protein of unknown function | |
PSPTO_4621 | 1 | 26 | -3.462885 | transporter, putative | |
PSPTO_4622 | 4 | 31 | -6.141545 | transcriptional regulator, MerR family | |
PSPTO_4623 | 3 | 30 | -6.045630 | conserved domain protein | |
PSPTO_4624 | 4 | 29 | -6.080715 | methyl-accepting chemotaxis protein | |
PSPTO_4625 | 5 | 30 | -6.395289 | ISPsy4, transposase | |
PSPTO_4626 | 0 | 15 | -3.149651 | ISPsy4, transposition helper protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4595 | SALSPVBPROT | 28 | 0.010 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4611 | TYPE3OMGPROT | 29 | 0.032 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4625 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
73 | PSPTO_4668 | PSPTO_4770 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4668 | 2 | 18 | -3.478485 | membrane protein, putative | |
PSPTO_4669 | 3 | 22 | -4.473404 | endonuclease/exonuclease/phosphatase family | |
PSPTO_4670 | 3 | 35 | -6.717893 | hypothetical protein | |
PSPTO_4671 | 5 | 39 | -7.135586 | alkaline D-peptidase, putative | |
PSPTO_4672 | 6 | 37 | -5.330081 | hypothetical protein | |
PSPTO_4673 | 5 | 25 | -1.864974 | protein of unknown function | |
PSPTO_4674 | 5 | 25 | -1.047648 | hypothetical protein | |
PSPTO_4675 | 6 | 24 | -0.254052 | transcriptional regulator, Sir2 family | |
PSPTO_4676 | 6 | 20 | 2.890776 | protein of unknown function | |
PSPTO_4677 | 5 | 19 | 3.552784 | hypothetical protein | |
PSPTO_4680 | 4 | 20 | 4.808537 | coronafacic acid synthetase, ligase component | |
PSPTO_4681 | 4 | 21 | 7.388787 | coronafacic acid synthetase, acyl carrier | |
PSPTO_4682 | 3 | 21 | 7.962450 | coronafacic acid synthetase, dehydratase | |
PSPTO_4683 | 3 | 21 | 8.048061 | coronafacic acid beta-ketoacyl synthetase | |
PSPTO_4684 | 3 | 21 | 7.728447 | coronafacic acid synthetase component | |
PSPTO_4685 | 3 | 22 | 7.465526 | coronafacic acid synthetase, ligase component | |
PSPTO_4686 | 4 | 19 | 5.784770 | coronafacic acid polyketide synthase I | |
PSPTO_4687 | 3 | 17 | 2.956408 | coronafacic acid polyketide synthetase II | |
PSPTO_4688 | 3 | 22 | -3.616005 | protein of unknown function | |
PSPTO_4689 | 3 | 22 | -4.115843 | crotonyl-CoA reductase | |
PSPTO_4690 | 3 | 29 | -5.302334 | CFA synthetase, thioesterase component | |
PSPTO_4691 | 2 | 30 | -5.851406 | type III effector HopAD1 | |
PSPTO_4693 | -1 | 24 | -0.775164 | ISPsy5, transposase | |
PSPTO_4694 | 0 | 25 | -0.627867 | ISPsy5, Orf1 | |
PSPTO_4695 | 0 | 25 | -0.666627 | ISPsy13, transposase OrfA | |
PSPTO_4696 | 0 | 25 | -0.806243 | ISPsy13, transposase OrfB | |
PSPTO_4697 | 0 | 25 | -0.529370 | ISPs1, transposase OrfB | |
PSPTO_4699 | 0 | 24 | -0.417952 | non-ribosomal peptide synthetase, terminal | |
PSPTO_5629 | 3 | 25 | -1.826016 | insertion sequence, putative | |
PSPTO_4702 | 3 | 27 | -2.183729 | ISPssy, transposase | |
PSPTO_4703 | 3 | 23 | -1.605995 | type III effector HopAQ1 | |
PSPTO_4704 | 2 | 22 | -1.534713 | DNA-binding response regulator CorR | |
PSPTO_4705 | 2 | 20 | -2.317796 | sensor histidine kinase CorS | |
PSPTO_4706 | 3 | 20 | -3.133714 | response regulator CorP | |
PSPTO_4707 | 3 | 20 | -2.879320 | coronamic acid synthetase CmaD | |
PSPTO_4708 | 3 | 18 | -2.772512 | coronamic acid synthetase CmaE | |
PSPTO_4709 | 3 | 19 | -3.160625 | coronamic acid synthetase CmaA | |
PSPTO_4710 | 1 | 19 | -3.721126 | coronamic acid synthetase CmaB | |
PSPTO_4711 | 0 | 19 | -3.349890 | coronamic acid synthetase CmaC | |
PSPTO_4712 | -1 | 22 | -3.151000 | coronamic acid synthetase, thioesterase | |
PSPTO_4713 | -1 | 22 | -3.408696 | alanyl tRNA synthetase-related protein | |
PSPTO_4714 | 0 | 29 | -4.591953 | cmaU protein | |
PSPTO_4716 | 0 | 31 | -4.772610 | protein of unknown function | |
PSPTO_4717 | 2 | 32 | -5.588111 | protein of unknown function | |
PSPTO_4718 | 3 | 34 | -6.238335 | type III effector HopAA1-2 | |
PSPTO_4719 | 4 | 40 | -7.784661 | protein of unknown function | |
PSPTO_4720 | 4 | 35 | -6.710272 | type III effector HopV1 | |
PSPTO_4721 | 6 | 38 | -9.008158 | type III chaperone ShcV | |
PSPTO_4722 | 6 | 36 | -7.883133 | type III effector HopAO1 | |
PSPTO_4723 | 6 | 31 | -6.397435 | conserved protein of unknown function | |
PSPTO_4724 | 5 | 33 | -6.511489 | type III effector HopD | |
PSPTO_4725 | 6 | 33 | -7.279585 | IS52, transposase | |
PSPTO_4727 | 6 | 38 | -8.281841 | type III effector HopG1 | |
PSPTO_4729 | 6 | 32 | -3.470275 | ISPsy4, transposition helper protein | |
PSPTO_4730 | 4 | 29 | -3.603425 | ISPsy4, transposase | |
PSPTO_4732 | 5 | 32 | -4.705000 | type III effector HopQ1-2 | |
PSPTO_4733 | 5 | 32 | -4.922418 | protein of unknown function | |
PSPTO_4734 | 6 | 37 | -6.838160 | conserved domain protein | |
PSPTO_4735 | 5 | 42 | -8.828836 | ATP-dependent helicase HrpB | |
PSPTO_4737 | 5 | 49 | -12.191846 | ISPsy5, transposase | |
PSPTO_4738 | 4 | 44 | -9.600624 | ISPsy5, Orf1 | |
PSPTO_4741 | 5 | 41 | -9.550189 | hypothetical protein | |
PSPTO_4742 | 5 | 39 | -9.382467 | site-specific recombinase, phage integrase | |
PSPTO_4743 | 4 | 36 | -8.279329 | hypothetical protein | |
PSPTO_4744 | 3 | 30 | -6.750917 | site-specific recombinase, phage integrase | |
PSPTO_4745 | 2 | 25 | -5.335551 | ATP-dependent helicase HrpB, putative | |
PSPTO_5632 | 4 | 31 | -6.574715 | hypothetical protein | |
PSPTO_4746 | 4 | 33 | -5.368084 | site-specific recombinase, phage integrase | |
PSPTO_4747 | 4 | 30 | -3.837533 | hypothetical protein | |
PSPTO_4748 | 5 | 31 | -4.074231 | site-specific recombinase, phage integrase | |
PSPTO_4750 | 4 | 31 | -3.503691 | protein of unknown function | |
PSPTO_4751 | 3 | 30 | -3.462377 | UvrD/REP helicase family protein | |
PSPTO_4752 | 3 | 34 | -4.745731 | protein of unknown function | |
PSPTO_4753 | 3 | 32 | -5.371794 | protein of unknown function | |
PSPTO_4754 | 3 | 38 | -7.121733 | protein of unknown function | |
PSPTO_4755 | 3 | 35 | -5.846922 | conserved protein of unknown function | |
PSPTO_4756 | 2 | 37 | -7.184751 | hypothetical protein | |
PSPTO_4757 | 3 | 37 | -7.147009 | hypothetical protein | |
PSPTO_4758 | 2 | 38 | -6.833563 | hypothetical protein | |
PSPTO_4759 | 1 | 31 | -5.827855 | conserved hypothetical protein | |
PSPTO_4760 | 1 | 30 | -5.926441 | DNA-binding protein | |
PSPTO_4761 | 1 | 30 | -6.058514 | protein of unknown function | |
PSPTO_4762 | 2 | 31 | -6.878176 | von Willebrand factor type A domain protein | |
PSPTO_4763 | 1 | 28 | -5.998688 | protein of unknown function | |
PSPTO_4764 | 2 | 25 | -5.025474 | ISPsy5, transposase | |
PSPTO_4765 | 3 | 28 | -5.770242 | ISPsy5, Orf1 | |
PSPTO_4766 | 3 | 26 | -5.276719 | protein of unknown function | |
PSPTO_4767 | 3 | 27 | -5.885357 | pentapeptide repeat protein | |
PSPTO_4768 | 3 | 23 | -3.768309 | ISPsy4, transposition helper protein | |
PSPTO_4769 | 1 | 23 | -4.371600 | ISPsy4, transposase | |
PSPTO_4770 | 1 | 22 | -4.753502 | conserved domain protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4671 | FLGHOOKAP1 | 30 | 0.011 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4677 | adhesinmafb | 31 | 0.004 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4687 | DHBDHDRGNASE | 45 | 1e-06 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4704 | HTHFIS | 65 | 9e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4705 | PF06580 | 35 | 4e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4707 | ISCHRISMTASE | 26 | 0.015 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4720 | MYCMG045 | 29 | 0.029 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4721 | PF06704 | 28 | 0.005 | DspF/AvrF protein | |
>PF06704#DspF/AvrF protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4722 | FbpA_PF05833 | 33 | 0.002 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4730 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4761 | PERTACTIN | 33 | 0.005 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4769 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
74 | PSPTO_4779 | PSPTO_4789 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4779 | 1 | 21 | -4.503308 | conserved hypothetical protein | |
PSPTO_4780 | 0 | 23 | -5.524310 | hypothetical protein | |
PSPTO_4781 | -1 | 26 | -6.395462 | conserved domain protein | |
PSPTO_4782 | -1 | 31 | -7.490127 | D-galactose 1-dehydrogenase | |
PSPTO_5631 | -1 | 34 | -8.426138 | hypothetical protein | |
PSPTO_4784 | -2 | 28 | -6.799451 | GGDEF domain protein | |
PSPTO_4785 | -1 | 22 | -3.303293 | hypothetical protein | |
PSPTO_4786 | 0 | 18 | -2.542132 | methyl-accepting chemotaxis protein | |
PSPTO_4787 | 0 | 17 | -2.218401 | sensor histidine kinase | |
PSPTO_4788 | 1 | 14 | -1.594240 | RNA 2'-phosphotransferase | |
PSPTO_4789 | 2 | 15 | -0.901226 | conserved protein of unknown function |
75 | PSPTO_4842 | PSPTO_4854 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4842 | -1 | 15 | 3.553488 | biosynthetic arginine decarboxylase | |
PSPTO_4843 | -1 | 12 | 3.794850 | esterase/lipase/thioesterase family protein | |
PSPTO_4844 | -1 | 13 | 3.847258 | DNA-damage-inducible protein F | |
PSPTO_4845 | -1 | 15 | 3.520098 | lipoprotein, putative | |
PSPTO_4846 | -1 | 16 | 3.564348 | conserved protein of unknown function | |
PSPTO_4847 | 0 | 16 | 3.980536 | penicillin-binding protein | |
PSPTO_4848 | -1 | 18 | 2.408286 | response regulator | |
PSPTO_4849 | 0 | 18 | 2.693236 | conserved protein of unknown function | |
PSPTO_4850 | 0 | 19 | 2.855097 | conserved protein of unknown function | |
PSPTO_4851 | 0 | 17 | 2.815857 | bacterial type II/III secretion system protein | |
PSPTO_4852 | 1 | 19 | 2.495559 | conserved protein of unknown function | |
PSPTO_4853 | 1 | 18 | 1.973091 | type II/IV secretion system protein, putative | |
PSPTO_4854 | 2 | 19 | 1.533493 | conserved protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4848 | HTHFIS | 84 | 5e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4851 | BCTERIALGSPD | 140 | 2e-38 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4852 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
76 | PSPTO_4873 | PSPTO_4878 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4873 | 2 | 11 | 4.082081 | hypothetical protein | |
PSPTO_4874 | 3 | 11 | 4.932571 | CbiG protein/precorrin-3B C17-methyltransferase | |
PSPTO_4875 | 3 | 13 | 4.995294 | precorrin-2 C20-methyltransferase | |
PSPTO_4876 | 3 | 12 | 5.024476 | precorrin-8X methylmutase | |
PSPTO_4877 | 4 | 14 | 5.164207 | cobalamin biosynthesis protein CobG, putative | |
PSPTO_4878 | 3 | 15 | 3.958332 | precorrin-6Y C5,15-methyltransferase |
77 | PSPTO_4964 | PSPTO_4978 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4964 | 1 | 33 | -7.322647 | conserved protein of unknown function | |
PSPTO_4965 | 2 | 37 | -7.819807 | Ser/Thr protein phosphatase | |
PSPTO_4966 | 2 | 37 | -8.186152 | hypothetical protein | |
PSPTO_4967 | 2 | 35 | -7.844068 | hypothetical protein | |
PSPTO_4968 | 2 | 32 | -7.207720 | hypothetical protein | |
PSPTO_4969 | 1 | 29 | -6.829717 | hypothetical protein | |
PSPTO_4970 | 0 | 23 | -4.385946 | YD repeat protein | |
PSPTO_4971 | -1 | 13 | -0.375445 | ISPssy, transposase | |
PSPTO_4972 | -1 | 16 | 1.064705 | conserved protein of unknown function | |
PSPTO_4973 | -1 | 15 | 1.583886 | mutT/nudix family protein | |
PSPTO_4974 | 0 | 15 | 2.017602 | lipoprotein, putative | |
PSPTO_4975 | 0 | 14 | 2.725477 | cytosine/purine/uracil/thiamine/allantoin | |
PSPTO_4976 | -1 | 15 | 2.626232 | thiamin biosynthesis protein ThiC | |
PSPTO_4977 | -1 | 13 | 3.085779 | outer membrane efflux protein TolC, putative | |
PSPTO_4978 | -1 | 12 | 3.009090 | 3-deoxy-D-manno-octulosonic-acid transferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4975 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
78 | PSPTO_5077 | PSPTO_5107 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5077 | 3 | 16 | 3.081379 | hemolysin III | |
PSPTO_5078 | 2 | 16 | 4.059999 | malonate utilization transcriptional regulator | |
PSPTO_5079 | 3 | 17 | 4.796602 | malonate transporter, MadM subunit | |
PSPTO_5080 | 3 | 18 | 4.748544 | malonate transporter, MadL subunit | |
PSPTO_5081 | 4 | 18 | 5.492266 | malonyl CoA-acyl carrier protein transacylase, | |
PSPTO_5082 | 0 | 14 | 4.613355 | malonate decarboxylase subunit, putative | |
PSPTO_5083 | -1 | 15 | 3.948361 | malonate decarboxylase, gamma subunit | |
PSPTO_5084 | 0 | 13 | 3.768981 | malonate decarboxylase, beta subunit | |
PSPTO_5085 | 0 | 13 | 2.753667 | malonate decarboxylase, delta subunit | |
PSPTO_5086 | 0 | 12 | 2.500689 | 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A | |
PSPTO_5087 | 0 | 13 | 1.840207 | malonate decarboxylase, alpha subunit | |
PSPTO_5088 | 1 | 17 | 0.880200 | hypothetical protein | |
PSPTO_5089 | 1 | 17 | 0.767743 | conserved hypothetical protein | |
PSPTO_5090 | 0 | 17 | 0.730220 | ParA family protein | |
PSPTO_5091 | 3 | 18 | 2.446475 | conserved protein of unknown function | |
PSPTO_5092 | 2 | 19 | 3.132143 | acyltransferase family protein | |
PSPTO_5093 | 2 | 19 | 3.356403 | acyl carrier protein, putative | |
PSPTO_5094 | 2 | 18 | 3.827953 | acyl carrier protein, putative | |
PSPTO_5095 | 2 | 18 | 3.721003 | membrane protein, putative | |
PSPTO_5096 | 3 | 18 | 3.421837 | AMP-binding enzyme family protein | |
PSPTO_5097 | 3 | 17 | 3.670160 | glycosyl transferase, group 2 family protein | |
PSPTO_5098 | 5 | 17 | 3.347576 | conserved protein of unknown function | |
PSPTO_5099 | 4 | 19 | 3.104192 | histidine ammonia-lyase | |
PSPTO_5100 | 4 | 18 | 2.582682 | 4-hydroxybenzoyl-CoA thioesterase domain | |
PSPTO_5101 | 4 | 18 | 2.880800 | conserved protein of unknown function | |
PSPTO_5102 | 4 | 16 | 3.451074 | membrane protein, putative | |
PSPTO_5103 | 2 | 17 | 2.959041 | membrane protein, putative | |
PSPTO_5104 | 0 | 17 | 3.155189 | conserved hypothetical protein | |
PSPTO_5105 | 1 | 16 | 3.136859 | conserved hypothetical protein | |
PSPTO_5106 | 2 | 17 | 3.304135 | lipoprotein, putative | |
PSPTO_5107 | 0 | 16 | 3.362423 | 3-oxoacyl-(acyl-carrier-protein) synthase II, |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5102 | ACRIFLAVINRP | 44 | 2e-06 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
79 | PSPTO_5201 | PSPTO_5232 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5201 | 5 | 38 | -7.659099 | hypothetical protein | |
PSPTO_5202 | 6 | 44 | -9.743516 | protein of unknown function | |
PSPTO_5203 | 6 | 44 | -10.014248 | protein of unknown function | |
PSPTO_5204 | 7 | 50 | -11.732667 | EF hand domain protein | |
PSPTO_5205 | 7 | 57 | -13.461591 | protein of unknown function | |
PSPTO_5206 | 8 | 59 | -14.117680 | EF hand domain protein | |
PSPTO_5207 | 6 | 43 | -10.413652 | conserved hypothetical protein | |
PSPTO_5208 | 5 | 41 | -9.921210 | hypothetical protein | |
PSPTO_5209 | 4 | 42 | -10.461334 | hypothetical protein | |
PSPTO_5210 | 3 | 31 | -7.342989 | EF hand domain protein | |
PSPTO_5211 | 3 | 22 | -5.147018 | conserved hypothetical protein | |
PSPTO_5212 | 1 | 17 | -2.874654 | ISPsy5, transposase | |
PSPTO_5213 | 1 | 15 | -2.143432 | ISPsy5, Orf1 | |
PSPTO_5214 | 0 | 11 | -0.458995 | ISPsy5, Orf1 | |
PSPTO_5215 | 0 | 12 | 0.682333 | ISPsy5, transposase | |
PSPTO_5216 | 1 | 13 | 2.705906 | lipoprotein, NLPA family | |
PSPTO_5217 | 0 | 13 | 3.918228 | sigma-54-binding protein | |
PSPTO_5218 | -1 | 13 | 3.484414 | conserved protein of unknown function | |
PSPTO_5219 | -1 | 13 | 3.498854 | MFS transporter, phthalate permease family | |
PSPTO_5220 | -1 | 12 | 3.345317 | transcriptional regulator, AraC family | |
PSPTO_5221 | -1 | 12 | 3.333201 | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol | |
PSPTO_5222 | 0 | 11 | 2.674628 | 2-octaprenyl-6-methoxyphenyl hydroxylase | |
PSPTO_5223 | -1 | 13 | 1.001801 | Xaa-Pro aminopeptidase | |
PSPTO_5224 | 0 | 19 | -0.176989 | conserved protein of unknown function | |
PSPTO_5225 | 0 | 18 | -1.567314 | conserved protein of unknown function | |
PSPTO_5226 | 0 | 18 | -0.252846 | conserved protein of unknown function | |
PSPTO_5227 | 1 | 26 | -2.887463 | 5-formyltetrahydrofolate cyclo-ligase family | |
PSPTO_5228 | 2 | 30 | -4.772181 | protein of unknown function | |
PSPTO_5229 | 2 | 31 | -4.980649 | conserved hypothetical protein | |
PSPTO_5230 | 2 | 32 | -4.947153 | flagellar protein FliL, putative | |
PSPTO_5231 | 1 | 33 | -4.974573 | oxidoreductase, zinc-binding protein | |
PSPTO_5232 | 1 | 37 | -5.721650 | pyocin/colicin protein, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5201 | PERTACTIN | 29 | 0.023 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5217 | HTHFIS | 273 | 6e-91 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5219 | TCRTETB | 39 | 4e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5228 | BCTERIALGSPG | 24 | 0.038 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5232 | PYOCINKILLER | 245 | 1e-74 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. |
80 | PSPTO_5342 | PSPTO_5349 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5342 | 2 | 20 | -0.538727 | A/G-specific adenine glycosylase | |
PSPTO_5343 | 3 | 29 | -2.712712 | conserved protein of unknown function | |
PSPTO_5344 | 3 | 30 | -2.824647 | *site-specific recombinase, phage integrase | |
PSPTO_5345 | 3 | 31 | -3.315177 | protein of unknown function | |
PSPTO_5346 | 0 | 19 | -1.778809 | hypothetical protein | |
PSPTO_5347 | 1 | 20 | -3.142990 | hypothetical protein | |
PSPTO_5348 | 2 | 22 | -4.045682 | protein of unknown function | |
PSPTO_5349 | 0 | 15 | -3.298775 | prevent-host-death family protein |
81 | PSPTO_5359 | PSPTO_5373 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5359 | 1 | 14 | 3.089744 | amino acid ABC transporter, permease protein | |
PSPTO_5360 | 2 | 18 | -1.647112 | amino acid ABC transporter, permease protein | |
PSPTO_5361 | 3 | 24 | -3.406957 | conserved hypothetical protein | |
PSPTO_5362 | 3 | 25 | -5.340856 | protein of unknown function | |
PSPTO_5363 | 4 | 24 | -5.087916 | DnaJ domain protein | |
PSPTO_5364 | 5 | 28 | -7.288589 | hypothetical protein | |
PSPTO_5365 | 5 | 35 | -9.993225 | *conserved domain protein | |
PSPTO_5367 | 3 | 28 | -8.008583 | ISPsy5, Orf1 | |
PSPTO_5368 | 2 | 27 | -7.322806 | ISPsy5, transposase | |
PSPTO_5370 | 4 | 32 | -7.973395 | ISPsy4, transposition helper protein | |
PSPTO_5371 | 2 | 28 | -7.254344 | ISPsy5, Orf1 | |
PSPTO_5373 | 1 | 24 | -5.489388 | protein of unknown function |
82 | PSPTO_5383 | PSPTO_5398 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5383 | 2 | 22 | -3.441437 | phosphoglycerate mutase family protein | |
PSPTO_5384 | 6 | 20 | -3.602797 | conserved protein of unknown function | |
PSPTO_5385 | 4 | 20 | -3.530597 | protein of unknown function | |
PSPTO_5386 | 3 | 16 | -2.930039 | hypothetical protein | |
PSPTO_5387 | 2 | 17 | -3.083900 | stability cassette protein, putative | |
PSPTO_5388 | -1 | 15 | -1.647904 | stability cassette protein, putative | |
PSPTO_5389 | -2 | 15 | -1.189814 | acetyltransferase, GNAT family | |
PSPTO_5390 | -2 | 12 | 0.720544 | conserved hypothetical protein | |
PSPTO_5391 | -2 | 13 | 1.223214 | outer membrane porin, OprD family | |
PSPTO_5392 | -2 | 12 | 1.568030 | protein of unknown function | |
PSPTO_5393 | -2 | 13 | 2.353679 | conserved protein of unknown function | |
PSPTO_5394 | -2 | 13 | 2.736166 | carbon-nitrogen hydrolase family protein | |
PSPTO_5395 | -1 | 13 | 3.082287 | aminotransferase, class III | |
PSPTO_5396 | -2 | 14 | 3.166312 | dTDP-glucose 4,6-dehydratase | |
PSPTO_5397 | -2 | 15 | 3.459143 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
PSPTO_5398 | -2 | 15 | 3.171305 | sensor histidine kinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5396 | NUCEPIMERASE | 174 | 9e-54 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5398 | CHANLCOLICIN | 30 | 0.022 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. |
83 | PSPTO_5408 | PSPTO_5442 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5408 | 1 | 20 | -3.623042 | protein of unknown function | |
PSPTO_5409 | 2 | 23 | -4.691218 | ATP-dependent DNA helicase domain protein | |
PSPTO_5410 | 2 | 21 | -4.874913 | protein of unknown function | |
PSPTO_5411 | 2 | 22 | -5.277867 | ISPsy5, transposase | |
PSPTO_5412 | 2 | 22 | -5.041435 | ISPsy5, Orf1 | |
PSPTO_5413 | 1 | 16 | -3.448284 | EF hand domain protein | |
PSPTO_5414 | 0 | 13 | -1.416451 | lipoprotein, putative | |
PSPTO_5415 | -1 | 12 | -0.729138 | Rhs element Vgr protein | |
PSPTO_5416 | 0 | 13 | -0.818738 | serine/threonine protein kinase, putative | |
PSPTO_5417 | 0 | 15 | -0.947419 | serine/threonine phosphoprotein phosphatase | |
PSPTO_5418 | 0 | 14 | -1.285044 | conserved protein of unknown function | |
PSPTO_5419 | 0 | 17 | -1.554881 | conserved protein of unknown function | |
PSPTO_5420 | 1 | 17 | -0.808064 | conserved protein of unknown function | |
PSPTO_5421 | 3 | 17 | -0.516076 | lipoprotein, putative | |
PSPTO_5422 | 2 | 16 | -1.172515 | FHA domain protein | |
PSPTO_5423 | 1 | 16 | -1.549501 | conserved protein of unknown function | |
PSPTO_5424 | 1 | 18 | -2.375982 | sigma-54 dependent transcriptional regulator | |
PSPTO_5425 | 1 | 20 | -4.104927 | clpB protein, putative | |
PSPTO_5426 | 2 | 27 | -6.439535 | conserved protein of unknown function | |
PSPTO_5427 | 2 | 30 | -7.182424 | conserved protein of unknown function | |
PSPTO_5428 | 2 | 23 | -6.737348 | ISPssy, transposase | |
PSPTO_5646 | 2 | 22 | -6.605636 | protein of unknown function | |
PSPTO_5645 | 3 | 18 | -3.964928 | protein of unknown function | |
PSPTO_5430 | 2 | 16 | -1.773650 | conserved protein of unknown function | |
PSPTO_5431 | 1 | 18 | -0.950985 | conserved protein of unknown function | |
PSPTO_5432 | 1 | 15 | -1.261402 | conserved protein of unknown function | |
PSPTO_5433 | 1 | 16 | -1.857803 | conserved protein of unknown function | |
PSPTO_5434 | 0 | 14 | -2.130236 | conserved protein of unknown function | |
PSPTO_5435 | 1 | 14 | -2.243575 | secreted protein Hcp | |
PSPTO_5436 | 0 | 14 | -2.375611 | Rhs element Vgr protein | |
PSPTO_5437 | 0 | 16 | -3.412863 | protein of unknown function | |
PSPTO_5438 | 0 | 17 | -3.321687 | Rhs family protein | |
PSPTO_5440 | 1 | 22 | -3.701531 | ISPssy, transposase | |
PSPTO_5442 | 2 | 20 | -3.786074 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5416 | YERSSTKINASE | 36 | 1e-04 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5424 | HTHFIS | 400 | e-138 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5425 | HTHFIS | 30 | 0.039 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
84 | PSPTO_5528 | PSPTO_5535 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5528 | -1 | 12 | 3.154603 | N-acetylmuramoyl-L-alanine amidase, family 3 | |
PSPTO_5529 | -1 | 12 | 3.353794 | conserved protein of unknown function | |
PSPTO_5530 | 0 | 11 | 4.342363 | cardiolipin synthetase | |
PSPTO_5531 | 1 | 12 | 4.724933 | hypothetical protein | |
PSPTO_5532 | 2 | 13 | 4.627553 | cadmium-translocating P-type ATPase | |
PSPTO_5533 | 1 | 12 | 3.939968 | SPFH domain / Band 7 family protein | |
PSPTO_5534 | 1 | 11 | 3.493775 | SPFH domain / Band 7 family protein | |
PSPTO_5535 | 2 | 12 | 3.240618 | SPFH domain / Band 7 family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5533 | OMADHESIN | 30 | 0.019 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. |
85 | PSPTO_5562 | PSPTO_5582 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5562 | 1 | 27 | -4.618791 | iron compound ABC transporter, iron | |
PSPTO_5563 | 2 | 33 | -5.757406 | hemin ABC transporter, permease protein, | |
PSPTO_5564 | 3 | 40 | -8.071236 | ISPssy, transposase | |
PSPTO_5565 | 3 | 43 | -8.207997 | hypothetical protein | |
PSPTO_5566 | 3 | 43 | -8.033844 | transposition protein, TnsD-related protein | |
PSPTO_5567 | 1 | 37 | -6.397078 | membrane protein, putative | |
PSPTO_5568 | 0 | 33 | -5.214212 | hypothetical protein | |
PSPTO_5569 | 0 | 33 | -5.466227 | methyl-accepting chemotaxis protein | |
PSPTO_5571 | 1 | 30 | -4.643000 | ISPsy7, transposase | |
PSPTO_5573 | 2 | 29 | -4.416016 | sensor histidine kinase | |
PSPTO_5575 | 2 | 29 | -3.527914 | ISPsy4, transposase | |
PSPTO_5576 | 0 | 30 | -4.739759 | ISPsy4, transposition helper protein | |
PSPTO_5578 | 0 | 35 | -5.742387 | conserved hypothetical protein | |
PSPTO_5579 | -1 | 30 | -6.417807 | transcriptional regulator, MerR family | |
PSPTO_5580 | -1 | 24 | -5.371794 | sodium:bile acid symporter family protein | |
PSPTO_5581 | -1 | 19 | -4.542112 | conserved domain protein | |
PSPTO_5582 | -1 | 18 | -4.027017 | ISPssy, transposase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5562 | FERRIBNDNGPP | 30 | 0.008 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5569 | PF06580 | 31 | 0.014 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5571 | STREPTOPAIN | 30 | 0.011 | Streptopain (C10) cysteine protease family signature. | |
>STREPTOPAIN#Streptopain (C10) cysteine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5575 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5581 | SSBTLNINHBTR | 26 | 0.040 | Streptomyces subtilisin inhibitor signature. | |
>SSBTLNINHBTR#Streptomyces subtilisin inhibitor signature. |
86 | PSPTO_0135 | PSPTO_0141 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0135 | 6 | 11 | 2.736323 | peptidyl-prolyl cis-trans isomerase, FKBP-type | |
PSPTO_0136 | 6 | 11 | 3.387954 | alginate regulatory protein AlgR3 | |
PSPTO_0137 | 2 | 13 | 3.115561 | conserved protein of unknown function | |
PSPTO_0138 | 1 | 13 | 2.909844 | ABC transporter, ATP-binding protein | |
PSPTO_0139 | -1 | 12 | 1.791147 | conserved protein of unknown function | |
PSPTO_0140 | -1 | 10 | 1.619950 | homoserine/homoserine lactone efflux protein | |
PSPTO_0141 | -1 | 12 | 1.492501 | lead uptake protein, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0135 | INFPOTNTIATR | 126 | 4e-38 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0136 | IGASERPTASE | 46 | 1e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0138 | GPOSANCHOR | 30 | 0.041 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0141 | GPOSANCHOR | 31 | 0.013 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
87 | PSPTO_0372 | PSPTO_0381 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0372 | -1 | 18 | 2.242131 | ISPsy7, transposase | |
PSPTO_0373 | 0 | 22 | 2.981994 | Rhs family protein | |
PSPTO_0374 | -1 | 16 | 2.664032 | protein of unknown function | |
PSPTO_0375 | 0 | 17 | 2.593574 | cation efflux family protein | |
PSPTO_0376 | -1 | 12 | 1.663514 | cation efflux family protein | |
PSPTO_0377 | -1 | 11 | 1.469064 | metal ion efflux outer membrane protein, | |
PSPTO_0378 | -2 | 10 | 0.633227 | DNA-binding heavy metal response regulator | |
PSPTO_0379 | -1 | 9 | 0.692103 | heavy metal sensor histidine kinase | |
PSPTO_0380 | -2 | 15 | 0.802516 | conserved protein of unknown function | |
PSPTO_0381 | -3 | 14 | 0.735222 | conserved protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0372 | STREPTOPAIN | 30 | 0.011 | Streptopain (C10) cysteine protease family signature. | |
>STREPTOPAIN#Streptopain (C10) cysteine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0373 | OUTRSURFACE | 32 | 0.009 | Outer surface protein signature. | |
>OUTRSURFACE#Outer surface protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0375 | ACRIFLAVINRP | 797 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0376 | RTXTOXIND | 39 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0378 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0379 | PF06580 | 38 | 5e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0381 | IGASERPTASE | 29 | 0.006 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
88 | PSPTO_0558 | PSPTO_0562 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0558 | 1 | 11 | 1.167153 | conserved protein of unknown function | |
PSPTO_0559 | 0 | 13 | 1.029210 | sensory box histidine kinase | |
PSPTO_0560 | -2 | 16 | 0.919245 | DNA-binding response regulator, LuxR family | |
PSPTO_0561 | -2 | 16 | 0.917203 | hypothetical protein | |
PSPTO_0562 | -2 | 16 | 1.063856 | polyamine ABC transporter, ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0558 | IGASERPTASE | 35 | 6e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0559 | PF06580 | 43 | 2e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0560 | HTHFIS | 66 | 8e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0562 | PF05272 | 33 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
89 | PSPTO_0810 | PSPTO_0823 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0810 | 2 | 21 | -3.608988 | type IV pilus biogenesis protein | |
PSPTO_0811 | 3 | 20 | -3.709742 | pillin, putative | |
PSPTO_0812 | 2 | 17 | -2.627443 | protein of unknown function | |
PSPTO_0813 | 1 | 18 | -2.771700 | protein of unknown function | |
PSPTO_0814 | 1 | 17 | -2.273111 | conserved protein of unknown function | |
PSPTO_0815 | 0 | 10 | -0.545098 | type IV pilus-associated protein, putative | |
PSPTO_0816 | -2 | 10 | 2.055074 | type IV pilus biogenesis protein | |
PSPTO_0817 | -2 | 10 | 1.879288 | oxidoreductase, FAD-binding protein | |
PSPTO_0818 | -2 | 9 | 1.499440 | transcriptional regulator, MarR family | |
PSPTO_0819 | -2 | 9 | 1.457953 | conserved hypothetical protein | |
PSPTO_0820 | -1 | 11 | 1.682769 | AcrB/AcrD/AcrF family protein | |
PSPTO_0821 | -1 | 10 | 1.204190 | efflux transporter, RND family, MFP subunit | |
PSPTO_0822 | 0 | 11 | 0.719518 | transcriptional regulator, TetR family | |
PSPTO_0823 | 1 | 11 | 1.345099 | type 4 fimbriae expression regulatory protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0810 | BCTERIALGSPH | 41 | 4e-07 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0811 | BCTERIALGSPH | 40 | 7e-07 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0812 | BCTERIALGSPG | 28 | 0.011 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0813 | BCTERIALGSPH | 31 | 0.002 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0816 | BCTERIALGSPG | 49 | 2e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0819 | NUCEPIMERASE | 29 | 0.022 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0820 | ACRIFLAVINRP | 426 | e-134 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0821 | RTXTOXIND | 42 | 4e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0822 | HTHTETR | 60 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0823 | HTHFIS | 508 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
90 | PSPTO_0883 | PSPTO_0898 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0883 | -2 | 14 | 0.373796 | type III effector HopR1 | |
PSPTO_0884 | 1 | 11 | 0.685828 | transcriptional regulator, LacI family | |
PSPTO_0885 | -1 | 10 | 0.672445 | sucrose-6-phosphate hydrolase | |
PSPTO_0886 | -1 | 12 | 0.218495 | maltose/maltodextrin ABC transporter, | |
PSPTO_0887 | 1 | 13 | 1.144610 | sugar ABC transporter, permease protein | |
PSPTO_0888 | 1 | 13 | 0.805312 | sugar ABC transporter, permease protein | |
PSPTO_0889 | 1 | 14 | 0.210825 | sugar ABC transporter, periplasmic sugar-binding | |
PSPTO_0890 | 1 | 14 | -0.525334 | sucrose porin precursor | |
PSPTO_0891 | 1 | 14 | -0.419989 | hypothetical protein | |
PSPTO_0892 | 1 | 13 | -0.701829 | autotransporter, putative | |
PSPTO_0893 | 1 | 17 | -2.545672 | outer membrane protein P1, putative | |
PSPTO_0894 | 1 | 16 | -3.091449 | lipoprotein, putative | |
PSPTO_0895 | 1 | 15 | -2.021341 | hypothetical protein | |
PSPTO_0896 | 1 | 15 | -1.733574 | sensor histidine kinase/response regulator | |
PSPTO_0897 | 1 | 20 | -2.971637 | DNA-binding response regulator, LuxR family | |
PSPTO_0898 | 1 | 23 | -3.229273 | sensor histidine kinase/response regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0883 | GPOSANCHOR | 34 | 0.006 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0884 | HTHTETR | 31 | 0.004 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0886 | PF05272 | 31 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0889 | MALTOSEBP | 39 | 3e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0890 | PYOCINKILLER | 31 | 0.011 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0892 | PF03544 | 55 | 4e-10 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0893 | OUTRMMBRANEA | 33 | 0.002 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0896 | HTHFIS | 44 | 8e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0897 | HTHFIS | 56 | 1e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0898 | HTHFIS | 46 | 2e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
91 | PSPTO_0906 | PSPTO_0916 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0906 | 0 | 15 | -2.316054 | type III effector HopAI1 | |
PSPTO_0907 | 0 | 11 | -1.348417 | hypothetical protein | |
PSPTO_0908 | 1 | 15 | 0.930856 | protein-glutamate methylesterase CheB | |
PSPTO_0909 | 0 | 13 | 0.973220 | chemotaxis protein CheD, putative | |
PSPTO_0910 | 0 | 14 | 0.993891 | chemotaxis protein methyltransferase CheR | |
PSPTO_0911 | 1 | 13 | 1.670347 | chemotaxis protein CheW | |
PSPTO_0912 | 0 | 12 | 1.614818 | methyl-accepting chemotaxis protein | |
PSPTO_0913 | 0 | 14 | 2.192990 | chemotaxis sensor histidine kinase CheA | |
PSPTO_0914 | 0 | 16 | 2.075731 | STAS domain protein | |
PSPTO_0915 | -1 | 15 | 1.542647 | chemotaxis protein CheY | |
PSPTO_0916 | -1 | 15 | 1.318129 | methyl-accepting chemotaxis protein, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0906 | SALVRPPROT | 136 | 3e-41 | Salmonella virulence-associated 28kDa protein signature. | |
>SALVRPPROT#Salmonella virulence-associated 28kDa protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0908 | HTHFIS | 73 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0912 | IGASERPTASE | 31 | 0.014 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0913 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0915 | HTHFIS | 90 | 1e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0916 | RTXTOXIND | 29 | 0.033 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
92 | PSPTO_0988 | PSPTO_0995 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0988 | 2 | 13 | 1.377721 | conserved protein of unknown function | |
PSPTO_0989 | 1 | 10 | 1.951332 | conserved protein of unknown function | |
PSPTO_0990 | 1 | 9 | 1.270672 | conserved protein of unknown function | |
PSPTO_0991 | 1 | 11 | 0.783619 | conserved hypothetical protein | |
PSPTO_0992 | 0 | 11 | -0.211719 | ribosomal-protein-alanine acetyltransferase | |
PSPTO_0993 | 0 | 11 | -0.248688 | conserved protein of unknown function | |
PSPTO_0994 | 0 | 12 | 0.177863 | carbonic anhydrase | |
PSPTO_0995 | 0 | 13 | 0.024849 | methyl-accepting chemotaxis protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0988 | RTXTOXIND | 35 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0991 | PF03544 | 29 | 0.022 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0992 | SACTRNSFRASE | 40 | 8e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0995 | IGASERPTASE | 32 | 0.007 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
93 | PSPTO_0999 | PSPTO_1009 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_0999 | -1 | 9 | -1.213386 | major facilitator family transporter | |
PSPTO_1000 | -1 | 10 | -1.952697 | CDP-alcohol phosphatidyltransferase family | |
PSPTO_1001 | -1 | 11 | -1.791808 | conserved protein of unknown function | |
PSPTO_1003 | -1 | 12 | -1.873808 | acetyltransferase, GNAT family | |
PSPTO_1004 | 0 | 10 | -1.846975 | GGDEF domain protein | |
PSPTO_1005 | -1 | 9 | -0.369167 | GDP-mannose 4,6-dehydratase | |
PSPTO_1006 | -1 | 11 | 0.773006 | protein of unknown function | |
PSPTO_1007 | 0 | 11 | 0.432124 | GDP-6-deoxy-D-lyxo-4-hexulose reductase | |
PSPTO_1008 | 0 | 11 | 1.252455 | methyl-accepting chemotaxis protein | |
PSPTO_1009 | 2 | 9 | 0.352274 | isochorismatase family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_0999 | TCRTETB | 52 | 2e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1003 | SACTRNSFRASE | 51 | 4e-11 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1005 | NUCEPIMERASE | 91 | 7e-23 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1007 | NUCEPIMERASE | 143 | 2e-42 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1009 | ISCHRISMTASE | 39 | 7e-06 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. |
94 | PSPTO_1074 | PSPTO_1084 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1074 | 1 | 20 | -5.244565 | glycosyl transferase, group 2 family protein | |
PSPTO_1075 | 0 | 15 | -3.328751 | O-antigen ABC transporter, ATP-binding protein, | |
PSPTO_1076 | -1 | 15 | -3.156599 | O-antigen ABC transporter, permease protein, | |
PSPTO_1077 | 0 | 17 | -3.441718 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
PSPTO_1078 | 0 | 17 | -3.092283 | lipopolysaccharide biosynthesis protein | |
PSPTO_1079 | 1 | 14 | -2.204184 | glucose-1-phosphate thymidylyltransferase | |
PSPTO_1080 | 0 | 16 | -2.205245 | dTDP-4-dehydrorhamnose reductase | |
PSPTO_1081 | 0 | 13 | -1.675405 | dTDP-glucose 4,6-dehydratase | |
PSPTO_1082 | 1 | 18 | -2.930820 | hypothetical protein | |
PSPTO_1083 | 2 | 16 | -2.445360 | peptidase, S24 family | |
PSPTO_1084 | 0 | 14 | -2.318885 | integrase/recombinase XerD, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1074 | CHANLCOLICIN | 35 | 0.004 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1076 | ABC2TRNSPORT | 30 | 0.011 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1080 | NUCEPIMERASE | 49 | 1e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1081 | NUCEPIMERASE | 182 | 5e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1083 | TYPE3OMOPROT | 26 | 0.047 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1084 | AUTOINDCRSYN | 28 | 0.049 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. |
95 | PSPTO_1153 | PSPTO_1165 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1153 | 0 | 18 | 1.506289 | NAD(P)H-flavin oxidoreductase | |
PSPTO_1154 | 0 | 17 | 1.383777 | hydrolase, alpha/beta fold family | |
PSPTO_1155 | -1 | 16 | 1.938361 | endoribonuclease L-PSP family protein | |
PSPTO_1156 | -1 | 14 | 2.027380 | isochorismatase family protein | |
PSPTO_1157 | -1 | 14 | 1.825090 | bacterial luciferase family protein | |
PSPTO_1158 | -2 | 10 | 0.799351 | transcriptional regulator, TetR family | |
PSPTO_1159 | 0 | 13 | -0.385182 | bmp family protein | |
PSPTO_1160 | 0 | 21 | -2.585350 | ABC transporter, ATP-binding protein | |
PSPTO_1161 | 1 | 22 | -4.491911 | hypothetical protein | |
PSPTO_1164 | 0 | 13 | -2.365437 | ompA family protein | |
PSPTO_1165 | 0 | 16 | -2.718896 | protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1153 | YERSSTKINASE | 29 | 0.017 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1155 | LIPPROTEIN48 | 27 | 0.024 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1156 | ISCHRISMTASE | 74 | 2e-17 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1158 | HTHTETR | 67 | 8e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1164 | OMPADOMAIN | 95 | 3e-25 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1165 | PF07132 | 29 | 0.031 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) |
96 | PSPTO_1305 | PSPTO_1309 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1305 | -2 | 11 | 1.413647 | GGDEF domain protein | |
PSPTO_1306 | -2 | 12 | 1.606554 | heavy metal sensor histidine kinase | |
PSPTO_1307 | -2 | 11 | 0.926804 | DNA-binding heavy metal response regulator | |
PSPTO_1308 | -2 | 10 | 0.105981 | AcrB/AcrD/AcrF family protein | |
PSPTO_1309 | -1 | 21 | -3.121893 | HlyD family secretion protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1305 | BCTERIALGSPH | 28 | 0.048 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1307 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1308 | ACRIFLAVINRP | 741 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1309 | RTXTOXIND | 60 | 5e-12 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
97 | PSPTO_1370 | PSPTO_1384 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1370 | -1 | 18 | -1.235727 | type III effector HopN1 | |
PSPTO_1371 | -1 | 16 | -0.601607 | conserved effector locus protein | |
PSPTO_1372 | 0 | 14 | -1.134749 | type III effector HopAA1-1 | |
PSPTO_1373 | 0 | 13 | -0.997978 | type III helper protein HrpW1 | |
PSPTO_1374 | 0 | 13 | -0.864962 | type III chaperone ShcM | |
PSPTO_1375 | -1 | 13 | -0.767025 | type III effector HopM1 | |
PSPTO_1376 | 0 | 12 | -0.893360 | type III chaperone ShcE | |
PSPTO_1377 | 0 | 12 | -0.636667 | type III effector protein AvrE1 | |
PSPTO_1378 | -2 | 16 | 0.472261 | membrane-bound lytic murein transglycosylase D | |
PSPTO_1379 | 0 | 17 | -0.348819 | type III transcriptional regulator HrpR | |
PSPTO_1380 | 0 | 17 | 0.144294 | type III transcriptional regulator HrpS | |
PSPTO_1381 | 2 | 16 | 0.875479 | type III helper protein HrpA1 | |
PSPTO_1382 | 3 | 16 | 1.052148 | type III helper protein HrpZ1 | |
PSPTO_1383 | 3 | 17 | 1.630546 | type III secretion protein HrpB | |
PSPTO_1384 | 0 | 12 | 0.513486 | type III secretion protein HrcJ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1370 | SACTRNSFRASE | 28 | 0.026 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1373 | cloacin | 44 | 1e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1376 | PF06704 | 225 | 7e-80 | DspF/AvrF protein | |
>PF06704#DspF/AvrF protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1377 | FIMBRIALPAPE | 37 | 3e-04 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1378 | PF03544 | 33 | 0.003 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1379 | HTHFIS | 275 | 6e-92 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1380 | HTHFIS | 255 | 2e-84 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1382 | cloacin | 31 | 0.007 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1384 | FLGMRINGFLIF | 97 | 5e-25 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. |
98 | PSPTO_1389 | PSPTO_1403 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1389 | 0 | 11 | -1.154717 | outer-membrane type III secretion protein HrcC | |
PSPTO_1390 | 2 | 16 | -1.045851 | type III secretion protein HrpT | |
PSPTO_1391 | 3 | 15 | -0.771830 | negative regulator of hrp expression HrpV | |
PSPTO_1392 | 4 | 15 | 0.441134 | type III secretion protein HrcU | |
PSPTO_1393 | 3 | 15 | 1.681088 | type III secretion protein HrcT | |
PSPTO_1394 | 3 | 16 | 1.225591 | type III secretion protein HrcS | |
PSPTO_1395 | 0 | 16 | 2.966305 | type III secretion protein HrcR | |
PSPTO_1396 | 0 | 15 | 3.570130 | type III secretion protein HrcQb | |
PSPTO_1397 | 0 | 14 | 2.651505 | type III secretion protein HrcQa | |
PSPTO_1398 | 0 | 13 | 1.985532 | type III secretion protein HrpP | |
PSPTO_1399 | 1 | 13 | 1.407466 | type III secretion protein HrpO | |
PSPTO_1400 | -1 | 10 | 0.918779 | type III secretion cytoplasmic ATPase HrcN | |
PSPTO_1401 | 0 | 10 | -0.680341 | type III secretion protein HrpQ | |
PSPTO_1402 | -1 | 11 | -1.547809 | type III secretion protein HrcV | |
PSPTO_1403 | 0 | 17 | -2.344290 | type III secretion protein HrpJ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1389 | TYPE3OMGPROT | 621 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1392 | TYPE3IMSPROT | 407 | e-144 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1393 | TYPE3IMRPROT | 167 | 4e-53 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1394 | TYPE3IMQPROT | 74 | 4e-21 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1395 | TYPE3IMPPROT | 233 | 2e-80 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1396 | TYPE3OMOPROT | 50 | 4e-10 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1397 | FLGMOTORFLIM | 32 | 0.002 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1399 | BACINVASINB | 30 | 0.003 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1403 | PF07201 | 163 | 6e-50 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ |
99 | PSPTO_1495 | PSPTO_1507 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1495 | 0 | 13 | 2.680261 | chemotaxis protein methyltransferase CheR, | |
PSPTO_1496 | 0 | 16 | 2.109928 | CheW domain protein | |
PSPTO_1497 | 0 | 16 | 2.028538 | sensor histidine kinase/response regulator | |
PSPTO_1498 | 0 | 18 | 0.766876 | protein-glutamate methylesterase CheB | |
PSPTO_1499 | -1 | 19 | 0.901815 | response regulator/GGDEF domain protein | |
PSPTO_1500 | -1 | 18 | 0.578236 | protein of unknown function | |
PSPTO_1501 | -1 | 16 | 0.383801 | lysyl-tRNA synthetase | |
PSPTO_1502 | -1 | 13 | 0.159280 | transcriptional regulator, TetR family | |
PSPTO_1503 | -1 | 14 | 1.952635 | conserved protein of unknown function | |
PSPTO_1504 | 0 | 14 | 2.373023 | lipoprotein, putative | |
PSPTO_1505 | -1 | 15 | 2.590966 | lipoprotein, putative | |
PSPTO_1506 | -1 | 16 | 2.546556 | ompA family protein | |
PSPTO_1507 | -1 | 11 | 2.423873 | conserved protein of unknown function |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1495 | PF03544 | 31 | 0.010 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1497 | HTHFIS | 74 | 5e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1498 | HTHFIS | 49 | 2e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1499 | HTHFIS | 62 | 7e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1500 | PHPHTRNFRASE | 31 | 0.009 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1502 | HTHTETR | 53 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1506 | OMPADOMAIN | 116 | 6e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1507 | adhesinb | 27 | 0.030 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. |
100 | PSPTO_1643 | PSPTO_1650 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1643 | 1 | 10 | 2.763642 | conserved protein of unknown function | |
PSPTO_1644 | 0 | 12 | 3.207284 | ATP-dependent DNA helicase RecQ | |
PSPTO_1645 | 0 | 17 | 4.121080 | transcriptional regulator, MarR family | |
PSPTO_1646 | 1 | 18 | 4.056868 | LysM domain protein | |
PSPTO_1647 | 2 | 22 | 3.908380 | lipoprotein, putative | |
PSPTO_1648 | 0 | 18 | 2.385495 | aerotaxis receptor | |
PSPTO_1649 | 1 | 16 | 1.509481 | autotransporter, putative | |
PSPTO_1650 | 0 | 16 | -0.027712 | autotransporter, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1643 | PF06917 | 28 | 0.026 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1646 | IGASERPTASE | 35 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1649 | SUBTILISIN | 159 | 5e-45 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1650 | SUBTILISIN | 156 | 3e-44 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. |
101 | PSPTO_1669 | PSPTO_1679 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1669 | 0 | 15 | 3.022250 | propionate kinase | |
PSPTO_1670 | 0 | 15 | 2.853691 | xylulose-5-phosphate/fructose-6-phosphate | |
PSPTO_1671 | 0 | 18 | 2.787685 | ribonucleoside-diphosphate reductase, alpha | |
PSPTO_1672 | -1 | 19 | 2.933284 | DNA-binding response regulator | |
PSPTO_1673 | -1 | 20 | 2.447503 | sensor histidine kinase | |
PSPTO_1674 | 0 | 16 | 1.166554 | ferric iron reductase protein FhuF | |
PSPTO_1675 | -2 | 15 | 1.356412 | siderophore biosynthesis protein, putative | |
PSPTO_1676 | -2 | 14 | 0.398292 | conserved protein of unknown function | |
PSPTO_1677 | -1 | 15 | 0.341202 | dienelactone hydrolase family protein | |
PSPTO_1678 | -1 | 16 | 0.459687 | hypothetical protein | |
PSPTO_1679 | -1 | 17 | 0.253943 | transcriptional regulatory protein PhoP, |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1669 | ACETATEKNASE | 267 | 4e-88 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1672 | HTHFIS | 79 | 5e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1673 | PF06580 | 32 | 0.005 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1674 | 2FE2SRDCTASE | 76 | 1e-18 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1675 | ENTSNTHTASED | 101 | 1e-28 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1679 | HTHFIS | 84 | 6e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
102 | PSPTO_1740 | PSPTO_1747 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1740 | 1 | 22 | 2.907396 | oxidoreductase, short chain | |
PSPTO_1741 | 1 | 23 | 2.520973 | phosphoglycolate phosphatase | |
PSPTO_1742 | 1 | 22 | 2.081921 | 3-demethylubiquinone-9 3-methyltransferase | |
PSPTO_1743 | 2 | 16 | 2.302613 | hydrolase, Atz/Trz family | |
PSPTO_1744 | 2 | 14 | 1.901805 | initiation factor 2 subunit family | |
PSPTO_1745 | 2 | 19 | 0.400801 | DNA gyrase, subunit A | |
PSPTO_1746 | 2 | 15 | -0.606797 | phosphoserine aminotransferase | |
PSPTO_1747 | 2 | 15 | -0.964521 | chorismate mutase/prephenate dehydratase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1740 | DHBDHDRGNASE | 102 | 2e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1743 | UREASE | 34 | 0.002 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1745 | RTXTOXIND | 31 | 0.022 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1747 | adhesinmafb | 29 | 0.035 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. |
103 | PSPTO_1751 | PSPTO_1758 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1751 | -1 | 16 | -1.279059 | integration host factor, beta subunit | |
PSPTO_1752 | -2 | 16 | -1.364774 | hypothetical protein | |
PSPTO_1753 | -2 | 15 | -1.435557 | conserved hypothetical protein | |
PSPTO_1754 | -2 | 15 | -1.488059 | UDP-glucose 4-epimerase, putative | |
PSPTO_1755 | -2 | 13 | -1.914836 | glycosyl transferase, group 4 family protein | |
PSPTO_1756 | -2 | 11 | -2.184751 | nucleotide sugar epimerase/dehydratase WbpM | |
PSPTO_1757 | -2 | 13 | -2.434165 | competence protein, putative | |
PSPTO_1758 | -2 | 12 | -1.737834 | transcriptional regulator, TetR family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1751 | DNABINDINGHU | 115 | 9e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1754 | NUCEPIMERASE | 85 | 6e-21 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1756 | NUCEPIMERASE | 69 | 7e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1758 | HTHTETR | 51 | 3e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
104 | PSPTO_1859 | PSPTO_1866 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1859 | 1 | 15 | -0.372703 | isothiocyanate resistance protein SaxB; | |
PSPTO_1860 | 0 | 14 | 0.728495 | conserved protein of unknown function | |
PSPTO_1861 | 0 | 14 | 0.886947 | oxidoreductase, short chain | |
PSPTO_1862 | -1 | 15 | -0.438537 | oxidoreductase, zinc-binding protein | |
PSPTO_1863 | -1 | 16 | -0.029870 | hydrolase, alpha/beta fold family | |
PSPTO_1864 | -1 | 14 | 0.205767 | oxidoreductase, short chain | |
PSPTO_1865 | -1 | 11 | 0.370663 | NADH:flavin oxidoreductase/NADH oxidase family | |
PSPTO_1866 | -1 | 12 | -0.218745 | transcriptional regulator, TetR family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1859 | ISCHRISMTASE | 34 | 2e-04 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1861 | DHBDHDRGNASE | 99 | 9e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1864 | DHBDHDRGNASE | 78 | 4e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1866 | HTHTETR | 44 | 8e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
105 | PSPTO_1910 | PSPTO_1917 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1910 | 0 | 13 | 0.837432 | conserved protein of unknown function | |
PSPTO_1911 | 0 | 13 | -0.279643 | response regulator/TPR domain protein | |
PSPTO_1912 | 2 | 17 | -1.945841 | sensor histidine kinase | |
PSPTO_1913 | 0 | 11 | -0.605321 | conserved protein of unknown function | |
PSPTO_1914 | 0 | 11 | -0.260668 | oxidoreductase, short chain | |
PSPTO_1915 | 0 | 10 | -0.427939 | bacterial transferase, hexapeptide repeat | |
PSPTO_1916 | -1 | 10 | -0.075448 | 3-oxoacyl-(acyl-carrier-protein) synthase III, | |
PSPTO_1917 | 0 | 9 | 1.039352 | major facilitator family transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1910 | GPOSANCHOR | 31 | 0.005 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1911 | HTHFIS | 53 | 2e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1912 | PF06580 | 30 | 0.009 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1914 | DHBDHDRGNASE | 124 | 1e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1917 | TCRTETA | 104 | 9e-27 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
106 | PSPTO_1934 | PSPTO_1949 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1934 | 2 | 15 | -0.169507 | flagellar basal-body rod protein FlgC | |
PSPTO_1935 | 2 | 15 | 0.347590 | basal-body rod modification protein FlgD | |
PSPTO_1936 | 1 | 15 | 0.798401 | flagellar hook protein FlgE | |
PSPTO_1937 | 0 | 15 | 1.784077 | flagellar hook protein FlgE | |
PSPTO_1938 | 1 | 19 | 2.028041 | hypothetical protein | |
PSPTO_1939 | 1 | 18 | 1.534897 | flagellar basal-body rod protein FlgF | |
PSPTO_1940 | 2 | 16 | 1.236830 | flagellar basal-body rod protein FlgG | |
PSPTO_1941 | 0 | 11 | 0.727628 | flagellar L-ring protein FlgH | |
PSPTO_1942 | -1 | 12 | 0.474378 | flagellar P-ring protein FlgI | |
PSPTO_1943 | -2 | 11 | -0.106966 | peptidoglycan hydrolase FlgJ | |
PSPTO_1944 | -1 | 11 | -0.593820 | flagellar hook-associated protein FlgK | |
PSPTO_1945 | -2 | 12 | -1.102233 | flagellar hook-associated protein FlgL | |
PSPTO_1946 | -2 | 12 | -1.276266 | glycosyl transferase, group 2 family protein | |
PSPTO_1947 | 0 | 16 | -1.851830 | glycosyl transferase, group 2 family protein | |
PSPTO_1948 | 1 | 21 | -3.033833 | 3-oxoacyl-(acyl-carrier-protein) synthase III, | |
PSPTO_1949 | 2 | 17 | -1.765176 | flagellin |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1934 | FLGHOOKAP1 | 35 | 9e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1936 | FLGHOOKAP1 | 41 | 5e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1937 | FLGHOOKAP1 | 36 | 3e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1940 | FLGHOOKAP1 | 43 | 9e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1941 | FLGLRINGFLGH | 174 | 1e-56 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1942 | FLGPRINGFLGI | 433 | e-154 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1943 | FLGFLGJ | 126 | 2e-35 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1944 | FLGHOOKAP1 | 192 | 1e-55 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1945 | FLAGELLIN | 61 | 4e-12 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1949 | FLAGELLIN | 118 | 2e-32 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. |
107 | PSPTO_1954 | PSPTO_1985 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_1954 | -2 | 13 | 0.845609 | transcriptional regulator FleQ | |
PSPTO_1955 | -2 | 13 | 0.864575 | sensor histidine kinase FleS | |
PSPTO_1956 | -1 | 12 | 1.196381 | sigma-54 dependent transcriptional | |
PSPTO_1957 | -1 | 14 | 0.979872 | flagellar hook-basal body complex protein FliE | |
PSPTO_1958 | 0 | 15 | 1.094548 | flagellar M-ring protein FliF | |
PSPTO_1959 | 1 | 12 | 1.043422 | flagellar motor switch protein FliG | |
PSPTO_1960 | 2 | 14 | 1.089212 | flagellar assembly protein Flih, putative | |
PSPTO_1961 | 1 | 12 | 1.677921 | flagellum-specific ATP synthase FliI | |
PSPTO_1962 | 2 | 17 | 0.412919 | flagellar protein FliJ, putative | |
PSPTO_1963 | 2 | 15 | 0.094531 | STAS domain protein | |
PSPTO_1964 | 1 | 14 | 0.179283 | response regulator | |
PSPTO_1965 | 1 | 16 | 0.062207 | Hpt domain protein | |
PSPTO_1966 | 1 | 14 | 0.819531 | flagellar hook-length control protein FliK | |
PSPTO_1967 | 3 | 19 | -0.569506 | hypothetical protein | |
PSPTO_1968 | 3 | 22 | -0.271141 | flagellar protein FliL, putative | |
PSPTO_1969 | 6 | 22 | -0.057985 | flagellar motor switch protein FliM | |
PSPTO_1970 | 5 | 20 | 0.005987 | flagellar motor switch protein FliN | |
PSPTO_1971 | 3 | 17 | -0.378726 | flagellar protein FliO | |
PSPTO_1972 | 3 | 14 | -0.149212 | flagellar biosynthetic protein FliP | |
PSPTO_1973 | 2 | 13 | 0.274464 | flagellar biosynthetic protein FliQ | |
PSPTO_1974 | 1 | 11 | -0.008695 | flagellar biosynthetic protein FliR | |
PSPTO_1975 | 0 | 12 | -0.446265 | flagellar biosynthetic protein FlhB | |
PSPTO_1976 | 1 | 15 | -0.957319 | flagellar biosynthesis protein FlhA | |
PSPTO_1977 | 1 | 15 | -0.397584 | flagellar biosynthesis protein FlhF | |
PSPTO_1978 | 0 | 16 | -0.382617 | flagellar synthesis regulator FleN | |
PSPTO_1979 | 1 | 16 | -0.458069 | motility sigma factor FliA | |
PSPTO_1980 | 1 | 16 | -0.057383 | chemotaxis protein CheY | |
PSPTO_1981 | 0 | 15 | 0.443601 | chemotaxis protein CheZ | |
PSPTO_1982 | -1 | 15 | 0.992113 | chemotaxis sensor histidine kinase CheA | |
PSPTO_1983 | 0 | 16 | 0.458927 | protein-glutamate methylesterase CheB | |
PSPTO_1984 | 0 | 16 | 0.288426 | chemotaxis motA protein | |
PSPTO_1985 | 1 | 18 | -0.231775 | motB protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1954 | HTHFIS | 505 | e-179 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1956 | HTHFIS | 493 | e-174 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1957 | FLGHOOKFLIE | 78 | 2e-22 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1958 | FLGMRINGFLIF | 513 | e-179 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1959 | FLGMOTORFLIG | 299 | e-103 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1960 | FLGFLIH | 51 | 6e-10 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1962 | FLGFLIJ | 44 | 3e-08 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1964 | HTHFIS | 71 | 4e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1966 | FLGHOOKFLIK | 49 | 3e-08 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1969 | FLGMOTORFLIM | 252 | 2e-84 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1970 | FLGMOTORFLIN | 120 | 6e-38 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1972 | FLGBIOSNFLIP | 261 | 2e-90 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1973 | TYPE3IMQPROT | 49 | 1e-11 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1974 | TYPE3IMRPROT | 139 | 2e-42 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1975 | TYPE3IMSPROT | 311 | e-106 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1980 | HTHFIS | 88 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1982 | PF06580 | 48 | 1e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1983 | HTHFIS | 60 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_1985 | OMPADOMAIN | 61 | 6e-13 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. |
108 | PSPTO_2011 | PSPTO_2018 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2011 | 0 | 8 | -0.867671 | autotransporter, putative | |
PSPTO_2012 | -2 | 11 | 0.260976 | hypothetical protein | |
PSPTO_2013 | -1 | 12 | 0.725411 | hypothetical protein | |
PSPTO_2014 | -2 | 14 | 1.922989 | aerotaxis receptor | |
PSPTO_2015 | -2 | 12 | 1.261950 | CAAX amino terminal protease family protein | |
PSPTO_2016 | -2 | 12 | 1.713402 | aconitate hydratase 1 | |
PSPTO_2017 | -2 | 10 | 1.137649 | conserved hypothetical protein | |
PSPTO_2018 | -1 | 14 | 0.651826 | SirA protein, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2011 | PRTACTNFAMLY | 270 | 2e-80 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2014 | BACINVASINB | 30 | 0.020 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2016 | MYCMG045 | 30 | 0.039 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2018 | PF01206 | 86 | 2e-26 | SirA family protein | |
>PF01206#SirA family protein |
109 | PSPTO_2093 | PSPTO_2104 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2093 | -1 | 15 | 2.388158 | lysozyme, putative | |
PSPTO_2094 | -2 | 17 | 2.147145 | conserved hypothetical protein | |
PSPTO_2095 | -2 | 18 | 1.593550 | conserved domain protein | |
PSPTO_2096 | -1 | 20 | 2.181767 | hypothetical protein | |
PSPTO_2097 | -1 | 22 | 2.008673 | *oxidoreductase, short chain | |
PSPTO_2098 | -1 | 19 | 1.593545 | isochorismatase family protein | |
PSPTO_2099 | -2 | 20 | 1.725477 | helicase/SNF2 family domain protein | |
PSPTO_2100 | -1 | 15 | 1.435958 | conserved protein of unknown function | |
PSPTO_2101 | -1 | 17 | 1.410680 | transcription-repair coupling factor | |
PSPTO_2102 | 0 | 14 | 0.861972 | glyceraldehyde 3-phosphate dehydrogenase, type | |
PSPTO_2103 | -1 | 10 | 1.022145 | membrane protein, putative | |
PSPTO_2104 | -1 | 12 | 1.041865 | major facilitator family transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2093 | RTXTOXINA | 28 | 0.024 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2094 | PYOCINKILLER | 29 | 0.010 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2095 | PF00577 | 25 | 0.031 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2097 | DHBDHDRGNASE | 132 | 1e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2098 | ISCHRISMTASE | 46 | 2e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2103 | TCRTETB | 43 | 1e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2104 | TCRTETA | 35 | 6e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
110 | PSPTO_2113 | PSPTO_2119 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2113 | -1 | 16 | -1.529637 | conserved protein of unknown function | |
PSPTO_2114 | -1 | 15 | -1.180525 | conserved hypothetical protein | |
PSPTO_2115 | -1 | 13 | -1.199458 | vacJ lipoprotein, putative | |
PSPTO_2116 | 0 | 11 | -0.917981 | conserved protein of unknown function | |
PSPTO_2117 | -1 | 11 | -0.950604 | response regulator | |
PSPTO_2118 | 0 | 11 | -0.740751 | anti-anti-sigma factor, putative | |
PSPTO_2119 | 0 | 14 | -0.898490 | transaldolase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2113 | TYPE3OMGPROT | 26 | 0.030 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2115 | VACJLIPOPROT | 229 | 5e-78 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2117 | HTHFIS | 115 | 2e-30 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2119 | FIMBRIALPAPE | 29 | 0.012 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein |
111 | PSPTO_2128 | PSPTO_2135 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2128 | 0 | 12 | 2.090448 | response regulator | |
PSPTO_2129 | 0 | 12 | 2.375804 | sensory box histidine kinase/response regulator | |
PSPTO_2130 | 1 | 16 | 3.733073 | DNA-binding response regulator, LuxR family | |
PSPTO_2131 | 1 | 15 | 3.703922 | sensor histidine kinase | |
PSPTO_2132 | 0 | 15 | 3.546820 | conserved hypothetical protein | |
PSPTO_2133 | 1 | 16 | 3.779829 | RNA polymerase sigma-70 family protein | |
PSPTO_2134 | 0 | 16 | 3.912789 | pyoverdine synthetase, thioesterase component | |
PSPTO_2135 | 0 | 16 | 3.960256 | pyoverdine chromophore precursor synthetase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2128 | HTHFIS | 77 | 2e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2129 | HTHFIS | 64 | 9e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2130 | HTHFIS | 58 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2135 | ISCHRISMTASE | 33 | 0.031 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. |
112 | PSPTO_2222 | PSPTO_2228 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2222 | 1 | 18 | -1.801148 | sensor histidine kinase | |
PSPTO_2223 | 2 | 17 | -1.816583 | DNA-binding response regulator | |
PSPTO_2224 | 2 | 18 | -2.072229 | hypothetical protein | |
PSPTO_2225 | 1 | 15 | -0.935265 | autotransporter, putative | |
PSPTO_2226 | 2 | 18 | -1.211103 | conserved domain protein | |
PSPTO_2227 | 2 | 17 | -1.214773 | fimbrial protein, putative | |
PSPTO_2228 | 1 | 16 | -1.589822 | outer membrane usher protein fimD |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2222 | PF06580 | 33 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2223 | HTHFIS | 90 | 8e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2225 | PRTACTNFAMLY | 317 | 8e-98 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2228 | PF00577 | 748 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD |
113 | PSPTO_2245 | PSPTO_2259 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2245 | 0 | 15 | 4.407997 | sensor protein KdpD | |
PSPTO_2246 | 2 | 16 | 3.436025 | KDP operon transcriptional regulatory protein | |
PSPTO_2247 | 3 | 14 | 3.073954 | lipoprotein, putative | |
PSPTO_2248 | 3 | 14 | 3.410612 | moxR protein, putative | |
PSPTO_2249 | 3 | 11 | 3.214891 | conserved protein of unknown function | |
PSPTO_2250 | 2 | 12 | 2.677116 | transglutaminase-like domain protein | |
PSPTO_2251 | 2 | 13 | 2.179735 | conserved protein of unknown function | |
PSPTO_2253 | 0 | 13 | 0.557625 | conserved domain protein | |
PSPTO_2254 | 0 | 14 | 0.751214 | methyl-accepting chemotaxis protein | |
PSPTO_2255 | -1 | 19 | -0.390086 | hydrolase, TatD family | |
PSPTO_2256 | -1 | 22 | -1.552084 | transglycosylase, SLT family | |
PSPTO_2257 | -1 | 27 | -2.456087 | DoxD-like family protein | |
PSPTO_2259 | -1 | 28 | -2.675921 | sigma-54 dependent transcriptional regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2245 | PF06580 | 31 | 0.028 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2246 | HTHFIS | 94 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2248 | HTHFIS | 30 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2251 | TYPE3OMGPROT | 29 | 0.015 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2253 | ACRIFLAVINRP | 27 | 0.010 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2257 | PF06917 | 27 | 0.025 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2259 | HTHFIS | 307 | 2e-98 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
114 | PSPTO_2299 | PSPTO_2306 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2299 | -1 | 15 | 2.399892 | outer membrane porin OprF | |
PSPTO_2300 | -1 | 13 | 2.531668 | uroporphyrin-III C-methyltransferase | |
PSPTO_2301 | -1 | 13 | 2.322273 | nitrate reductase | |
PSPTO_2302 | 2 | 13 | 2.431879 | assimilatory nitrate reductase electron transfer | |
PSPTO_2303 | 2 | 11 | 2.269329 | serine/threonine protein kinase, putative | |
PSPTO_2304 | 3 | 12 | 1.860773 | nitrate transporter | |
PSPTO_2305 | 2 | 12 | 0.929776 | levansucrase | |
PSPTO_2306 | -3 | 14 | 2.231452 | response regulator NasT |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2299 | OMPADOMAIN | 134 | 9e-39 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2303 | YERSSTKINASE | 43 | 3e-06 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2304 | TCRTETB | 61 | 3e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2306 | HTHFIS | 45 | 6e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
115 | PSPTO_2711 | PSPTO_2717 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2711 | 1 | 17 | -0.959778 | response regulator | |
PSPTO_2712 | 1 | 15 | -0.401335 | sensor histidine kinase/response regulator | |
PSPTO_2713 | 0 | 11 | -1.092219 | chemotaxis protein methyltransferase CheR, | |
PSPTO_2714 | 0 | 11 | -0.701102 | protein-glutamate methylesterase, putative | |
PSPTO_2715 | -1 | 10 | -0.286508 | sensor histidine kinase/response regulator | |
PSPTO_2716 | -2 | 10 | 0.445295 | response regulator | |
PSPTO_2717 | -2 | 10 | 1.435817 | sensory box histidine kinase/response regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2711 | HTHFIS | 68 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2712 | HTHFIS | 77 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2715 | HTHFIS | 68 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2716 | HTHFIS | 65 | 1e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2717 | HTHFIS | 69 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
116 | PSPTO_2753 | PSPTO_2764 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2753 | -1 | 12 | 1.238042 | HlyD family secretion protein | |
PSPTO_2755 | -1 | 12 | 1.267530 | AcrB/AcrD/AcrF family protein | |
PSPTO_2756 | -2 | 10 | 0.976815 | outer membrane efflux protein | |
PSPTO_2757 | -1 | 10 | 0.383555 | GGDEF domain/EAL domain protein | |
PSPTO_2758 | -1 | 8 | 0.922730 | oxidoreductase, short-chain | |
PSPTO_2759 | 0 | 8 | 1.026902 | hypothetical protein | |
PSPTO_2760 | -1 | 8 | 1.017173 | alpha-amylase family protein | |
PSPTO_2761 | -1 | 9 | 1.035898 | alpha-amylase family protein | |
PSPTO_2762 | -1 | 9 | 0.690863 | 1,4-alpha-glucan branching enzyme | |
PSPTO_2763 | -1 | 11 | 0.579778 | autotransporter, putative | |
PSPTO_2764 | -1 | 11 | -0.702152 | transporter, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2753 | RTXTOXIND | 40 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2755 | ACRIFLAVINRP | 794 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2757 | PF03544 | 31 | 0.010 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2758 | DHBDHDRGNASE | 97 | 3e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2759 | PERTACTIN | 25 | 0.014 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2763 | PERTACTIN | 76 | 3e-16 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2764 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
117 | PSPTO_2870 | PSPTO_2874 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2870 | 0 | 9 | 1.079479 | conserved protein of unknown function | |
PSPTO_2871 | 0 | 10 | 1.524005 | conserved protein of unknown function | |
PSPTO_2872 | 1 | 13 | 1.657473 | HopL1 protein | |
PSPTO_2873 | 1 | 14 | 1.523192 | conserved protein of unknown function | |
PSPTO_2874 | 2 | 14 | 1.337379 | ppkA-related protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2870 | TONBPROTEIN | 38 | 4e-05 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2871 | PF07520 | 1292 | 0.0 | Virulence protein SrfB | |
>PF07520#Virulence protein SrfB | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2873 | PF03544 | 35 | 4e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2874 | LUXSPROTEIN | 31 | 0.008 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS |
118 | PSPTO_2916 | PSPTO_2922 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_2916 | 3 | 13 | 3.074691 | oxidoreductase, short chain | |
PSPTO_2917 | 1 | 12 | 3.085864 | LamB/YcsF family protein | |
PSPTO_2918 | 0 | 13 | 3.104637 | conserved hypothetical protein | |
PSPTO_2919 | -1 | 13 | 2.916952 | urea amidolyase-related protein | |
PSPTO_2920 | -1 | 13 | 2.927901 | conserved hypothetical protein TIGR00370 | |
PSPTO_2921 | -1 | 12 | 2.880252 | acetyl-CoA carboxylase, biotin carboxylase | |
PSPTO_2922 | -1 | 13 | 1.954409 | acetyl-CoA carboxylase, biotin carboxyl carrier |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2916 | DHBDHDRGNASE | 80 | 4e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2918 | RTXTOXIND | 27 | 0.029 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2921 | ENTSNTHTASED | 29 | 0.033 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_2922 | RTXTOXIND | 32 | 6e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
119 | PSPTO_3068 | PSPTO_3076 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3068 | 0 | 14 | 0.828428 | major facilitator family transporter | |
PSPTO_3069 | -1 | 13 | 0.374959 | transcriptional regulator, TetR family | |
PSPTO_3070 | -1 | 14 | 0.404055 | acetyltransferase, GNAT family | |
PSPTO_3071 | -1 | 14 | 0.252460 | ABC transporter, ATP-binding/permease protein | |
PSPTO_3072 | 0 | 16 | 0.239374 | transcriptional regulator, AraC family | |
PSPTO_3073 | -1 | 14 | -0.371888 | oxidoreductase, short chain | |
PSPTO_3074 | -1 | 14 | -0.390553 | transcriptional regulator, AraC family | |
PSPTO_3075 | 1 | 14 | 0.041404 | oxidoreductase, aldo/keto reductase family | |
PSPTO_3076 | 0 | 17 | 0.179553 | transcriptional regulator, TetR family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3068 | TCRTETA | 41 | 8e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3069 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3070 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3073 | DHBDHDRGNASE | 76 | 1e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3076 | HTHTETR | 77 | 1e-19 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
120 | PSPTO_3098 | PSPTO_3106 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3098 | 0 | 11 | 1.353543 | methyl-accepting chemotaxis protein | |
PSPTO_3099 | 0 | 13 | 1.913030 | multidrug efflux RND membrane fusion protein | |
PSPTO_3100 | 0 | 12 | 1.387252 | aliphatic isothiocyanate resistance protein | |
PSPTO_3101 | 3 | 14 | 1.402270 | outer membrane efflux protein | |
PSPTO_3102 | 1 | 12 | 0.260432 | TPR domain protein | |
PSPTO_3103 | 1 | 17 | -0.823056 | transcriptional regulator, putative | |
PSPTO_3104 | -1 | 14 | -0.178615 | protein of unknown function | |
PSPTO_3105 | 0 | 12 | -0.289266 | conserved protein of unknown function | |
PSPTO_3106 | 1 | 11 | 0.074420 | lactoylglutathione lyase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3098 | RTXTOXIND | 32 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3099 | RTXTOXIND | 57 | 6e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3100 | ACRIFLAVINRP | 1091 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3101 | RTXTOXIND | 31 | 0.011 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3102 | SYCDCHAPRONE | 33 | 8e-04 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3106 | NEISSPPORIN | 28 | 0.030 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. |
121 | PSPTO_3297 | PSPTO_3319 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3297 | -3 | 13 | 1.820288 | DNA-binding heavy metal response regulator, | |
PSPTO_3298 | -3 | 12 | 1.711052 | sensor histidine kinase | |
PSPTO_3299 | -3 | 12 | 1.719795 | 3-hydroxyacyl-CoA-acyl carrier protein | |
PSPTO_3300 | -3 | 12 | 1.570464 | efflux transporter, RND family, MFP subunit | |
PSPTO_3301 | -3 | 12 | 1.049935 | efflux transporter, RND family, MFP subunit | |
PSPTO_3302 | -2 | 12 | 0.761276 | AcrB/AcrD/AcrF family protein | |
PSPTO_3303 | -2 | 12 | 0.581397 | hypothetical protein | |
PSPTO_3304 | -1 | 13 | 1.189216 | major facilitator family transporter | |
PSPTO_3305 | 0 | 12 | 1.549772 | hypothetical protein | |
PSPTO_3306 | 1 | 14 | 2.502414 | phospholipase/carboxylesterase family protein | |
PSPTO_3307 | 2 | 14 | 3.058803 | general secretion pathway protein D | |
PSPTO_3308 | 4 | 15 | 3.943803 | general secretion pathway protein N, putative | |
PSPTO_3309 | 2 | 16 | 3.447611 | general secretion pathway protein M, putative | |
PSPTO_3310 | 2 | 17 | 2.713785 | general secretion pathway protein L, putative | |
PSPTO_3311 | 0 | 16 | 2.672067 | general secretion pathway protein K, putative | |
PSPTO_3312 | -3 | 12 | 3.000474 | general secretion pathway protein J, putative | |
PSPTO_3313 | -1 | 16 | 1.603394 | general secretion pathway protein I, putative | |
PSPTO_3314 | -1 | 16 | 1.409533 | general secretion pathway protein H | |
PSPTO_3315 | -2 | 15 | 1.399149 | general secretion pathway protein G | |
PSPTO_3316 | -2 | 14 | 1.554825 | general secretion pathway protein F | |
PSPTO_3317 | -1 | 15 | 1.581872 | general secretion pathway protein E | |
PSPTO_3318 | 1 | 16 | 1.901994 | beta-glucosidase | |
PSPTO_3319 | 2 | 14 | 2.975744 | transcriptional regulator, TetR family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3297 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3300 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3301 | RTXTOXIND | 37 | 1e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3302 | ACRIFLAVINRP | 468 | e-151 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3304 | TCRTETB | 39 | 2e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3306 | PF06057 | 30 | 0.007 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3307 | BCTERIALGSPD | 239 | 3e-71 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3312 | BCTERIALGSPG | 43 | 1e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3313 | BCTERIALGSPH | 34 | 6e-05 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3314 | BCTERIALGSPG | 40 | 4e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3315 | BCTERIALGSPG | 118 | 4e-37 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3316 | BCTERIALGSPF | 318 | e-108 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3318 | BINARYTOXINB | 53 | 6e-09 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3319 | HTHTETR | 92 | 3e-25 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
122 | PSPTO_3325 | PSPTO_3336 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3325 | -1 | 14 | 0.786410 | ISPsy7, transposase | |
PSPTO_3326 | -1 | 12 | 1.507525 | group II intron, maturase | |
PSPTO_3327 | -2 | 9 | 1.419960 | sarcosine oxidase | |
PSPTO_3328 | -2 | 10 | 0.842235 | ABC transporter, permease protein | |
PSPTO_3329 | -2 | 8 | 0.747754 | ABC transporter, periplasmic substrate-binding | |
PSPTO_3330 | -3 | 8 | 0.173158 | ABC transporter, ATP-binding protein | |
PSPTO_3331 | -2 | 9 | -0.772375 | protease inhibitor Inh | |
PSPTO_3332 | -1 | 9 | -1.149540 | alkaline metalloendoprotease | |
PSPTO_3333 | -2 | 12 | -0.805589 | membrane protein, putative | |
PSPTO_3334 | -1 | 15 | -0.395386 | *transcriptional regulator, LysR family | |
PSPTO_3335 | -2 | 17 | -0.561859 | ABC transporter, periplasmic substrate-binding | |
PSPTO_3336 | -1 | 16 | -1.175905 | citrate transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3325 | STREPTOPAIN | 30 | 0.011 | Streptopain (C10) cysteine protease family signature. | |
>STREPTOPAIN#Streptopain (C10) cysteine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3329 | RTXTOXIND | 409 | e-142 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3331 | MPTASEINHBTR | 101 | 4e-31 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3332 | CABNDNGRPT | 388 | e-133 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3336 | TCRTETA | 31 | 0.010 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
123 | PSPTO_3570 | PSPTO_3576 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3570 | 0 | 14 | -0.495067 | acetyltransferase, GNAT family | |
PSPTO_3571 | 0 | 13 | -0.571096 | hypothetical protein | |
PSPTO_3572 | -2 | 12 | -0.747915 | conserved hypothetical protein | |
PSPTO_3573 | -1 | 12 | -1.670162 | acetyltransferase, GNAT family | |
PSPTO_3574 | -1 | 9 | -0.814300 | TonB-dependent siderophore receptor, putative | |
PSPTO_3575 | -1 | 10 | -0.731613 | hypothetical protein | |
PSPTO_3576 | 0 | 10 | -0.373513 | TetR-like virulence regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3570 | SACTRNSFRASE | 39 | 4e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3573 | SACTRNSFRASE | 35 | 5e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3574 | OUTRMMBRANEA | 30 | 0.047 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3576 | HTHTETR | 75 | 6e-19 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
124 | PSPTO_3636 | PSPTO_3643 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3636 | 3 | 17 | 4.544828 | conserved protein of unknown function | |
PSPTO_3637 | 3 | 16 | 4.522145 | FlhB domain protein | |
PSPTO_3638 | 3 | 15 | 4.235150 | recombination protein RecR | |
PSPTO_3639 | 4 | 13 | 3.651775 | transcriptional regulator, LysR family | |
PSPTO_3640 | 2 | 12 | 3.774597 | conserved hypothetical protein | |
PSPTO_3641 | 0 | 11 | 3.297651 | endoribonuclease L-PSP family protein | |
PSPTO_3643 | -2 | 12 | 3.166784 | acetyltransferase, GNAT family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3636 | VACCYTOTOXIN | 33 | 0.001 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3637 | TYPE3IMSPROT | 66 | 4e-16 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3640 | ALARACEMASE | 36 | 3e-04 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3643 | SACTRNSFRASE | 36 | 4e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
125 | PSPTO_3694 | PSPTO_3703 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3694 | -2 | 8 | -0.319118 | glycosyl hydrolase, family 3 | |
PSPTO_3695 | 1 | 10 | 0.347094 | transcriptional regulator, TetR family | |
PSPTO_3696 | 0 | 9 | 0.997011 | sensory box histidine kinase/response regulator | |
PSPTO_3697 | 0 | 14 | 0.936381 | hypothetical protein | |
PSPTO_3698 | 0 | 13 | 1.357269 | transcriptional regulator, TetR family | |
PSPTO_3699 | 0 | 14 | 1.515023 | methyl-accepting chemotaxis protein | |
PSPTO_3700 | 0 | 13 | 2.013242 | oxidoreductase, aldo/keto reductase family | |
PSPTO_3701 | 0 | 13 | 1.848695 | cation transporter, putative | |
PSPTO_3702 | -1 | 12 | -0.121077 | phosphate transporter family protein | |
PSPTO_3703 | -2 | 12 | -0.508241 | HlyD family secretion protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3694 | BINARYTOXINB | 41 | 1e-05 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3695 | HTHTETR | 88 | 1e-23 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3696 | HTHFIS | 66 | 3e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3698 | HTHTETR | 79 | 2e-20 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3702 | ACRIFLAVINRP | 29 | 0.048 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3703 | RTXTOXIND | 117 | 4e-31 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
126 | PSPTO_3721 | PSPTO_3724 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3721 | 2 | 17 | -2.103610 | enoyl-(acyl-carrier-protein) reductase | |
PSPTO_3722 | 3 | 19 | -2.798367 | peptidyl-prolyl cis-trans isomerase D, putative | |
PSPTO_3723 | 2 | 20 | -2.772153 | DNA-binding protein HU-beta | |
PSPTO_3724 | 1 | 18 | -3.333624 | ATP-dependent protease La |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3721 | DHBDHDRGNASE | 60 | 7e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3722 | SECA | 29 | 0.046 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3723 | DNABINDINGHU | 116 | 7e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3724 | PF05272 | 30 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
127 | PSPTO_3741 | PSPTO_3753 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_3741 | -2 | 10 | -0.787438 | sigma-54 dependent transcriptional regulator | |
PSPTO_3742 | -2 | 12 | -0.492769 | cysteinyl-tRNA synthetase | |
PSPTO_3743 | -1 | 11 | -0.413386 | glutaminyl-tRNA synthetase | |
PSPTO_3744 | -1 | 12 | -0.719281 | peptidyl-prolyl cis-trans isomerase B | |
PSPTO_3745 | -1 | 12 | -0.334097 | UDP-2,3-diacylglucosamine hydrolase | |
PSPTO_3746 | -1 | 11 | -0.468984 | ISPsy7, transposase | |
PSPTO_3747 | -2 | 19 | 1.283071 | drug resistance transporter, EmrB/QacA family | |
PSPTO_3748 | -1 | 14 | 0.241566 | multidrug resistance protein | |
PSPTO_3749 | 0 | 12 | -1.371679 | multiple antibiotic resistance protein MarR, | |
PSPTO_3750 | 0 | 14 | -1.226611 | conserved protein of unknown function | |
PSPTO_3751 | 0 | 12 | -1.641508 | conserved protein of unknown function | |
PSPTO_3752 | -1 | 13 | -0.130210 | aconitate hydratase 2 | |
PSPTO_3753 | -1 | 10 | -0.493848 | methyl-accepting chemotaxis protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3741 | HTHFIS | 310 | e-101 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3746 | STREPTOPAIN | 30 | 0.011 | Streptopain (C10) cysteine protease family signature. | |
>STREPTOPAIN#Streptopain (C10) cysteine protease family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3747 | TCRTETB | 114 | 2e-29 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3748 | RTXTOXIND | 86 | 2e-20 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_3753 | BACINVASINB | 29 | 0.041 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. |
128 | PSPTO_4063 | PSPTO_4067 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4063 | -1 | 21 | -4.725058 | C4-dicarboxylate transport protein | |
PSPTO_4064 | 0 | 27 | -5.018660 | transcriptional regulator, TetR family | |
PSPTO_4065 | 1 | 27 | -5.596744 | oxidoreductase, short-chain | |
PSPTO_4066 | 0 | 27 | -5.442660 | conserved domain protein | |
PSPTO_4067 | 0 | 25 | -4.385644 | oxidoreductase, short-chain |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4063 | TCRTETA | 29 | 0.034 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4064 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4065 | DHBDHDRGNASE | 72 | 3e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4067 | DHBDHDRGNASE | 94 | 1e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
129 | PSPTO_4079 | PSPTO_4084 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4079 | 0 | 15 | 1.059578 | sensor histidine kinase/response regulator | |
PSPTO_4080 | 1 | 15 | 0.759026 | DNA-binding response regulator, LuxR family | |
PSPTO_4081 | 1 | 15 | 0.767394 | Rhs family protein | |
PSPTO_4082 | 1 | 15 | 0.960921 | oxidoreductase, short chain | |
PSPTO_4083 | 1 | 16 | 0.647431 | membrane protein, putative | |
PSPTO_4084 | 1 | 14 | 0.591272 | mannuronan C-5-epimerase, putative |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4079 | HTHFIS | 80 | 1e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4080 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4082 | DHBDHDRGNASE | 96 | 9e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4084 | CABNDNGRPT | 93 | 2e-21 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. |
130 | PSPTO_4200 | PSPTO_4204 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4200 | -1 | 12 | 3.135235 | oxidoreductase, short chain | |
PSPTO_4201 | -2 | 12 | 2.720525 | oxidoreductase, short chain | |
PSPTO_4202 | -2 | 12 | 2.161561 | major facilitator family transporter | |
PSPTO_4203 | -2 | 11 | 1.574206 | polysaccharide deacetylase family protein | |
PSPTO_4204 | -2 | 10 | 1.662223 | amidase family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4200 | DHBDHDRGNASE | 97 | 4e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4201 | DHBDHDRGNASE | 132 | 1e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4202 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4204 | PYOCINKILLER | 31 | 0.011 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. |
131 | PSPTO_4262 | PSPTO_4278 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4262 | 3 | 32 | -7.200370 | transcriptional regulator, TetR family | |
PSPTO_4263 | 2 | 29 | -5.777051 | oxidoreductase, short chain | |
PSPTO_4264 | 2 | 30 | -5.204330 | conserved hypothetical protein | |
PSPTO_4265 | 4 | 34 | -6.889392 | cystathionine beta-lyase | |
PSPTO_4266 | 4 | 31 | -5.919020 | membrane protein, putative | |
PSPTO_4267 | 3 | 25 | -4.486380 | transcriptional regulator, TetR family | |
PSPTO_4269 | 3 | 25 | -3.784918 | ISPsy4, transposase | |
PSPTO_4270 | 2 | 26 | -4.222129 | ISPsy4, transposition helper protein | |
PSPTO_4272 | 2 | 28 | -4.767283 | protein of unknown function | |
PSPTO_4274 | 1 | 24 | -2.486199 | transcriptional regulator, TetR family | |
PSPTO_4275 | 0 | 22 | -2.255973 | oxidoreductase, short-chain | |
PSPTO_4276 | 0 | 23 | -2.567514 | transcriptional regulator, LysR family | |
PSPTO_4277 | 0 | 21 | -2.479715 | esterase/lipase/thioesterase family protein | |
PSPTO_4278 | 0 | 21 | -1.774644 | major facilitator family transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4262 | HTHTETR | 57 | 2e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4263 | DHBDHDRGNASE | 102 | 4e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4267 | HTHTETR | 67 | 5e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4269 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4274 | HTHTETR | 46 | 3e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4275 | DHBDHDRGNASE | 42 | 8e-07 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4278 | TCRTETA | 56 | 9e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
132 | PSPTO_4292 | PSPTO_4306 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4292 | -2 | 10 | 0.103134 | sigma-54 dependent transcriptional | |
PSPTO_4293 | -1 | 10 | -0.414413 | sensory box histidine kinase/response regulator | |
PSPTO_4294 | -1 | 12 | -0.761349 | chaperone protein HscC | |
PSPTO_4295 | -3 | 11 | -0.299102 | DnaJ domain protein | |
PSPTO_4296 | -1 | 11 | 0.531180 | metabolite-proton symporter, putative | |
PSPTO_4297 | -2 | 10 | 0.297431 | conserved domain protein | |
PSPTO_4298 | -1 | 10 | 0.397005 | conserved hypothetical protein | |
PSPTO_4299 | -1 | 12 | 0.228076 | hypothetical protein | |
PSPTO_4300 | -1 | 14 | 0.569843 | drug resistance transporter, EmrB/QacA family | |
PSPTO_4301 | -1 | 14 | 0.113516 | conserved hypothetical protein | |
PSPTO_4302 | -1 | 17 | 1.051593 | transcriptional regulator, TetR family | |
PSPTO_4303 | -1 | 18 | 1.503061 | efflux transporter, RND family, MFP subunit | |
PSPTO_4304 | -1 | 18 | 1.448885 | isothiocyanate resistance protein SaxB; | |
PSPTO_4305 | -2 | 13 | 1.955106 | outer membrane efflux protein | |
PSPTO_4306 | -1 | 13 | 1.410680 | dicarboxylic acid transport protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4292 | HTHFIS | 426 | e-149 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4293 | HTHFIS | 85 | 2e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4294 | SHAPEPROTEIN | 118 | 2e-31 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4296 | TCRTETB | 36 | 4e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4300 | TCRTETB | 143 | 6e-40 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4302 | HTHTETR | 152 | 2e-48 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4303 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4304 | ACRIFLAVINRP | 1285 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4306 | TCRTETB | 39 | 3e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
133 | PSPTO_4653 | PSPTO_4661 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4653 | -2 | 17 | 2.406282 | xanthine/uracil permease family protein | |
PSPTO_4654 | -3 | 13 | 2.105302 | tRNA (uracil-5-)-methyltransferase | |
PSPTO_4656 | -2 | 13 | 2.219820 | membrane protein, putative | |
PSPTO_4657 | -3 | 15 | 2.036330 | zinc metallopeptidase, putative | |
PSPTO_4658 | -2 | 15 | 2.318528 | conserved domain protein | |
PSPTO_4659 | -2 | 15 | 2.794267 | HAD-superfamily hydrolase | |
PSPTO_4660 | -2 | 14 | 2.500759 | acyl-CoA thioesterase II | |
PSPTO_4661 | -2 | 15 | 2.304974 | acetyltransferase, GNAT family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4653 | RTXTOXINA | 30 | 0.021 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4654 | 56KDTSANTIGN | 30 | 0.022 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4656 | TCRTETA | 34 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4661 | FLGBIOSNFLIP | 28 | 0.016 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP |
134 | PSPTO_4889 | PSPTO_4898 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_4889 | -1 | 15 | 2.810024 | branched-chain amino acid ABC transporter, | |
PSPTO_4890 | 2 | 20 | 3.318651 | urease accessory protein UreD | |
PSPTO_4891 | 1 | 21 | 2.732608 | urease, gamma subunit | |
PSPTO_4892 | -1 | 19 | 2.687650 | phosphinothricin N-acetyltransferase, putative | |
PSPTO_4893 | -1 | 21 | 2.292618 | tabtoxin resistance protein | |
PSPTO_4894 | -1 | 19 | 1.603475 | urease, beta subunit | |
PSPTO_4895 | -2 | 18 | 1.130104 | urease, alpha subunit | |
PSPTO_4896 | -1 | 13 | 0.334125 | sensor histidine kinase | |
PSPTO_4897 | -1 | 13 | -0.075932 | curved-DNA-binding protein | |
PSPTO_4898 | -1 | 13 | -0.872212 | heat shock protein YegD |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4889 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4892 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4893 | SACTRNSFRASE | 30 | 0.004 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4895 | UREASE | 1120 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4896 | PF06580 | 31 | 0.009 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_4898 | SHAPEPROTEIN | 51 | 5e-09 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
135 | PSPTO_5030 | PSPTO_5036 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5030 | 0 | 14 | 2.201842 | sensor histidine kinase/response regulator | |
PSPTO_5031 | 1 | 18 | 1.007186 | type IV pilus biogenesis protein PilJ | |
PSPTO_5032 | 1 | 18 | 0.678128 | type IV pilus protein PilI | |
PSPTO_5033 | 0 | 20 | 0.990595 | type IV pilus response regulator PilH | |
PSPTO_5034 | 1 | 19 | 1.606534 | type IV pilus response regulator PilG | |
PSPTO_5035 | 1 | 22 | 2.635916 | glutathione synthetase | |
PSPTO_5036 | 0 | 17 | 3.524061 | tonB domain protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5030 | HTHFIS | 71 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5033 | HTHFIS | 80 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5034 | HTHFIS | 69 | 7e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5035 | RTXTOXINC | 28 | 0.025 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5036 | PF03544 | 64 | 4e-14 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein |
136 | PSPTO_5125 | PSPTO_5132 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5125 | -3 | 13 | 0.890093 | conserved protein of unknown function | |
PSPTO_5126 | -2 | 13 | 0.177929 | 3-dehydroquinate synthase | |
PSPTO_5127 | -2 | 12 | -0.216985 | shikimate kinase | |
PSPTO_5128 | -2 | 12 | 0.009253 | type IV pilus biogenesis protein PilQ | |
PSPTO_5129 | 0 | 12 | -0.009572 | type IV pilus biogenesis protein PilP | |
PSPTO_5130 | -1 | 11 | 0.225275 | type IV pilus biogenesis protein PilO | |
PSPTO_5131 | 0 | 13 | 0.347012 | type IV pilus biogenesis protein PilN | |
PSPTO_5132 | -1 | 13 | 1.822923 | type IV pilus biogenesis protein PilM |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5125 | PF03544 | 40 | 1e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5127 | PF05272 | 27 | 0.042 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5128 | BCTERIALGSPD | 273 | 3e-84 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5132 | SHAPEPROTEIN | 31 | 0.005 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
137 | PSPTO_5139 | PSPTO_5147 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5139 | -1 | 15 | 1.739339 | conserved protein of unknown function | |
PSPTO_5140 | -2 | 13 | 0.880659 | heat shock protein HslV | |
PSPTO_5141 | -1 | 12 | 0.858304 | heat shock protein HslVU, ATPase subunit HslU | |
PSPTO_5142 | 0 | 14 | 0.672051 | conserved hypothetical protein | |
PSPTO_5144 | 0 | 14 | 0.967483 | poly(3-hydroxyalkanoate) depolymerase | |
PSPTO_5145 | 0 | 14 | 0.474745 | poly(3-hydroxyalkanoate) polymerase | |
PSPTO_5146 | 3 | 16 | -0.165889 | transcriptional regulator PhaD | |
PSPTO_5147 | 2 | 15 | 0.910296 | polyhydroxyalkanoate granule-associated protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5139 | TONBPROTEIN | 28 | 0.042 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5141 | HTHFIS | 31 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5146 | HTHTETR | 63 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5147 | IGASERPTASE | 33 | 8e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
138 | PSPTO_5156 | PSPTO_5170 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5156 | 1 | 11 | 0.757761 | sec-independent protein translocase TatB | |
PSPTO_5157 | 1 | 13 | 0.237212 | sec-independent protein translocase TatC | |
PSPTO_5158 | 1 | 13 | 0.196854 | conserved protein of unknown function | |
PSPTO_5159 | 0 | 13 | -0.018972 | methyl-accepting chemotaxis protein | |
PSPTO_5160 | 0 | 13 | 0.168979 | methyl-accepting chemotaxis protein | |
PSPTO_5161 | -2 | 13 | 1.080338 | periplasmic glucan biosynthesis protein | |
PSPTO_5162 | -2 | 11 | 1.749783 | periplasmic glucan biosynthesis protein | |
PSPTO_5163 | -1 | 13 | 2.210287 | D-tyrosyl-tRNA(Tyr) deacylase | |
PSPTO_5164 | -1 | 14 | 2.284485 | proline iminopeptidase | |
PSPTO_5165 | -1 | 15 | 2.367859 | glycogen phosphorylase | |
PSPTO_5166 | 0 | 14 | 3.095844 | membrane protein, putative | |
PSPTO_5167 | -1 | 15 | 2.867216 | conserved protein of unknown function | |
PSPTO_5168 | -2 | 17 | 1.919984 | fructose-1,6-bisphosphatase | |
PSPTO_5169 | -2 | 15 | 2.972841 | lipoprotein, putative | |
PSPTO_5170 | -1 | 15 | 2.997270 | lipoprotein Blc |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5156 | TATBPROTEIN | 105 | 1e-31 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5159 | IGASERPTASE | 35 | 8e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5160 | RTXTOXIND | 30 | 0.040 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5162 | IGASERPTASE | 34 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5165 | RTXTOXINA | 30 | 0.049 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5166 | TONBPROTEIN | 32 | 0.007 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5167 | RTXTOXIND | 30 | 0.022 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5170 | BCTLIPOCALIN | 111 | 2e-33 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. |
139 | PSPTO_5190 | PSPTO_5193 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5190 | -1 | 11 | 0.851729 | conserved protein of unknown function | |
PSPTO_5191 | -3 | 11 | 0.711377 | AcrB/AcrD/AcrF family protein | |
PSPTO_5192 | -2 | 11 | 0.800388 | efflux transporter, RND family, MFP subunit | |
PSPTO_5193 | -2 | 9 | 0.865008 | efflux transporter, RND family, MFP subunit |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5190 | YERSSTKINASE | 28 | 0.032 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5191 | ACRIFLAVINRP | 497 | e-161 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5192 | RTXTOXIND | 39 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5193 | RTXTOXIND | 35 | 3e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
140 | PSPTO_5232 | PSPTO_5238 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
PSPTO_5232 | 1 | 37 | -5.721650 | pyocin/colicin protein, putative | |
PSPTO_5233 | -1 | 16 | -2.679676 | colicin/pyocin immunity family protein | |
PSPTO_5234 | -1 | 13 | -0.133883 | hypothetical protein | |
PSPTO_5235 | 0 | 14 | 1.791415 | hypothetical protein | |
PSPTO_5236 | -1 | 13 | 1.925884 | hypothetical protein | |
PSPTO_5237 | -1 | 12 | 1.006272 | tonB domain protein | |
PSPTO_5238 | -1 | 12 | 0.606099 | glycerol-3-phosphate transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5232 | PYOCINKILLER | 245 | 1e-74 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5234 | PYOCINKILLER | 32 | 0.001 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5237 | PF03544 | 41 | 7e-07 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
PSPTO_5238 | TCRTETA | 29 | 0.031 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |