| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | smi_2089 | smi_2062 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_2089 | 1 | 26 | -7.401874 | chromosome partitioning protein | |
| smi_2088 | 1 | 25 | -7.741181 | serine protease | |
| smi_2087 | 1 | 28 | -6.878174 | 23S rRNA | |
| smi_2085 | 1 | 26 | -7.612612 | *competence stimulating peptide (CSP) precursor | |
| smi_2084 | 1 | 22 | -6.596533 | histidine kinase | |
| smi_2083 | 0 | 21 | -5.693325 | response regulator | |
| smi_2080 | -1 | 22 | -4.451299 | **hypothetical protein | |
| smi_2079 | -1 | 21 | -4.542491 | hypothetical protein | |
| smi_2078 | -1 | 19 | -4.425593 | hypothetical protein | |
| smi_2077 | -1 | 19 | -2.997563 | ABC-F family ATPase | |
| smi_2076 | -2 | 23 | -3.996426 | tryptophanyl-tRNA synthetase | |
| smi_2075 | -1 | 23 | -4.253430 | inosine monophosphate dehydrogenase | |
| smi_2074 | -2 | 26 | -5.581987 | recombination protein recF | |
| smi_2073 | -3 | 25 | -4.662048 | hypothetical protein | |
| smi_2072 | -3 | 26 | -3.998724 | zinc-dependent protease | |
| smi_2071 | -4 | 26 | -3.439908 | zinc-dependent protease | |
| smi_2070 | -3 | 25 | -2.719896 | hypothetical protein | |
| smi_2069 | -2 | 26 | -3.213465 | phosphatidylglycerophosphate synthase | |
| smi_2068 | 0 | 25 | -2.846390 | ABCtransporter ATP-binding protein cobalt | |
| smi_2067 | 2 | 22 | -2.500861 | cobalt ABC transporter ATP-binding protein | |
| smi_2066 | 5 | 24 | -2.363636 | ABC transporter permease, cobalt transport | |
| smi_2065 | 6 | 29 | -1.754955 | cell shape determining protein MreC | |
| smi_2064 | 6 | 30 | -1.299065 | cell shape determining protein MreD | |
| smi_2063 | 5 | 25 | -0.544395 | general stress protein GSP-781 amidase | |
| smi_2062 | 2 | 20 | -0.577264 | 30S ribosomal protein S2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2088 | V8PROTEASE | 62 | 1e-12 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2087 | 56KDTSANTIGN | 27 | 0.037 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2080 | HTHTETR | 49 | 1e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2079 | ICENUCLEATIN | 34 | 0.003 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2077 | PF05272 | 32 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2063 | GPOSANCHOR | 51 | 5e-09 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 2 | smi_2023 | smi_1999 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_2023 | -1 | 19 | 3.883916 | ABC zinc transporter, metal-binding lipoprotein | |
| smi_2022 | 0 | 21 | 3.750263 | 5'-nucleotidase | |
| smi_2021 | 1 | 19 | 2.208754 | hypothetical protein | |
| smi_2020 | 2 | 19 | 0.894402 | beta-galactosidase/beta-glucuronidase, | |
| smi_2019 | 2 | 19 | 0.187820 | hypothetical protein | |
| smi_2018 | 2 | 20 | -0.760186 | fucosidase | |
| smi_2017 | 1 | 23 | -4.738319 | sugar hydrolase | |
| smi_2016 | 1 | 25 | -4.948848 | phage-related integrase, recombinase | |
| smi_2015 | 0 | 30 | -2.335535 | transcriptional regulator | |
| smi_2014 | 0 | 33 | -1.538167 | transcriptional regulator | |
| smi_2013 | 0 | 35 | -0.510626 | transcriptional regulator | |
| smi_2012 | 1 | 36 | -1.574555 | hypothetical protein | |
| smi_2011 | 3 | 40 | 1.160970 | hypothetical protein | |
| smi_2010 | 5 | 34 | 0.207017 | hypothetical protein | |
| smi_2009 | 4 | 32 | -0.170821 | hypothetical protein | |
| smi_2008 | 4 | 30 | 0.460313 | hypothetical protein | |
| smi_2007 | 4 | 27 | -0.116118 | hypothetical protein | |
| smi_2006 | 4 | 26 | -0.456731 | hypothetical protein | |
| smi_2005 | 3 | 26 | -1.234779 | replication protein | |
| smi_2004 | -1 | 22 | 1.336338 | phage-related DNA primase | |
| smi_2003 | -1 | 17 | 2.581933 | hypothetical protein | |
| smi_2002 | -2 | 17 | 3.255289 | hypothetical protein | |
| smi_2001 | -1 | 20 | 4.375784 | hypothetical protein | |
| smi_2000 | -1 | 22 | 4.132716 | hypothetical protein | |
| smi_1999 | -2 | 21 | 3.882675 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2001 | PF07520 | 26 | 0.022 | Virulence protein SrfB | |
>PF07520#Virulence protein SrfB | |||||
| 3 | smi_1989 | smi_1948 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1989 | 3 | 20 | 1.528992 | hypothetical protein | |
| smi_1988 | 2 | 19 | 1.788097 | hypothetical protein | |
| smi_1987 | -1 | 18 | 2.273785 | hypothetical protein | |
| smi_1986 | -1 | 19 | 2.996632 | hypothetical protein | |
| smi_1985 | -1 | 20 | 3.664141 | hypothetical protein | |
| smi_1984 | -1 | 20 | 3.560401 | transcriptional regulator | |
| smi_1983 | -1 | 15 | 3.030792 | cyanate permease | |
| smi_1982 | -2 | 17 | 2.279071 | glycosyl transferase | |
| smi_1981 | -1 | 19 | 2.022990 | nucleoside-diphosphate sugar isomerase | |
| smi_1980 | 0 | 20 | -1.078808 | phosphatase | |
| smi_1979 | 1 | 23 | -5.331153 | L-serine dehydratase, alpha subunit | |
| smi_1978 | 2 | 29 | -7.181608 | L-serine dehydratase, beta subunit | |
| smi_1977 | 3 | 32 | -8.472029 | LysM domain protein | |
| smi_1976 | 1 | 27 | -7.217743 | transcriptional regulator | |
| smi_1975 | 1 | 26 | -6.725331 | hypothetical protein | |
| smi_1974 | 1 | 21 | -5.013221 | hypothetical protein | |
| smi_1973 | 0 | 18 | -2.799903 | hypothetical protein | |
| smi_1972 | -1 | 17 | -1.427660 | ABC transporter ATP-binding protein | |
| smi_1971 | -1 | 16 | -1.112825 | hypothetical protein | |
| smi_1970 | -1 | 17 | -0.918945 | hypothetical protein | |
| smi_1969 | -1 | 15 | 0.397008 | ABC transporter ATP-binding protein | |
| smi_1968 | -3 | 14 | 1.996409 | ABC transporter substrate-binding protein | |
| smi_1967 | -2 | 17 | 2.357403 | argininosuccinate synthase | |
| smi_1966 | -1 | 21 | 4.013185 | argininosuccinate lyase | |
| smi_1965 | 0 | 23 | 4.718173 | hypothetical protein | |
| smi_1964 | 0 | 25 | 5.296387 | hypothetical protein | |
| smi_1963 | 0 | 22 | 4.874741 | transposase, ISSmi1 | |
| smi_1962 | -1 | 22 | 3.680596 | tRNA methyl transferase | |
| smi_1961 | 0 | 23 | 3.412692 | hypothetical protein | |
| smi_1960 | -1 | 24 | 1.412294 | NAD/FAD-binding enzyme GidA | |
| smi_1959 | 1 | 25 | 0.909829 | hydrolase | |
| smi_1958 | -2 | 25 | 1.745105 | hypothetical protein | |
| smi_1957 | 0 | 25 | 2.769628 | hypothetical protein | |
| smi_1956 | 0 | 25 | 4.945641 | cibC | |
| smi_1955 | 1 | 23 | 3.886840 | excreted peptide | |
| smi_1954 | -1 | 22 | 3.094094 | excreted peptide | |
| smi_1953 | 1 | 20 | 3.083492 | transposase, ISSmi1 | |
| smi_1952 | 0 | 20 | 2.654015 | molecular chaperone | |
| smi_1951 | 0 | 14 | 1.797807 | acetyltransferase | |
| smi_1950 | 1 | 13 | -0.206031 | metal-dependent protease | |
| smi_1949 | 4 | 25 | 0.213897 | transcriptional regulator | |
| smi_1948 | 2 | 20 | 2.126485 | metal-dependent CAAX amino terminal membrane |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1988 | IGASERPTASE | 42 | 4e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1986 | TCRTETB | 28 | 0.025 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1984 | TCRTETA | 44 | 5e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1983 | BCTERIALGSPF | 38 | 5e-05 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1982 | NUCEPIMERASE | 81 | 9e-19 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1978 | PF03544 | 30 | 0.004 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1959 | BACINVASINB | 25 | 0.036 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1952 | SACTRNSFRASE | 31 | 0.001 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 4 | smi_1935 | smi_1929 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1935 | 0 | 27 | 3.687606 | hypothetical protein | |
| smi_1934 | 0 | 27 | 4.394234 | NrdI family protein | |
| smi_1933 | 0 | 26 | 3.796113 | hypothetical protein | |
| smi_1932 | 0 | 22 | 3.949044 | transcriptional regulator | |
| smi_1931 | -1 | 23 | 3.675898 | hypothetical protein | |
| smi_1930 | -1 | 22 | 3.859950 | DNA mismatch repair protein hexB | |
| smi_1929 | 0 | 21 | 3.917429 | holiday junction DNA helicase RuvA |
| 5 | smi_1870 | smi_1847 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1870 | 2 | 20 | -0.446760 | leucyl-tRNA synthetase | |
| smi_1869 | 1 | 21 | -0.559854 | ABC transporter ATP-binding protein | |
| smi_1868 | 0 | 22 | 0.026253 | ABC transporter permease | |
| smi_1867 | 1 | 21 | 1.971492 | transcriptional regulator | |
| smi_1866 | 1 | 22 | 0.864457 | hypothetical protein | |
| smi_1863 | 2 | 27 | 0.885174 | acetyltransferase | |
| smi_1862 | 1 | 27 | 2.389119 | acetyltransferase | |
| smi_1861 | 0 | 24 | 2.720502 | transposase, ISSmi3 | |
| smi_1860 | -1 | 21 | 2.368507 | hypothetical protein | |
| smi_1859 | 0 | 19 | 1.665815 | hypothetical protein | |
| smi_1857 | -2 | 15 | 2.617859 | holliday junction DNA helicase RuvB | |
| smi_1856 | -2 | 14 | 3.027769 | hypothetical protein | |
| smi_1855 | -1 | 17 | 3.039246 | transposase, ISSmi3 | |
| smi_1854 | -1 | 15 | 3.242181 | transposase, ISSmi1 | |
| smi_1853 | -2 | 15 | 3.189829 | UDP diphosphate synthase | |
| smi_1852 | 0 | 22 | 3.467002 | phosphatidate cytidylyltransferase | |
| smi_1851 | 1 | 26 | 3.904113 | metallo protease | |
| smi_1850 | 2 | 28 | 3.920771 | prolyl-tRNA synthetase | |
| smi_1849 | 1 | 26 | 3.300477 | glycosyl hydrolase | |
| smi_1848 | 2 | 28 | 2.928953 | glutamine--fructose-6-phosphate transaminase | |
| smi_1847 | 4 | 30 | 2.979686 | oxidoreductase |
| 6 | smi_1806 | smi_1775 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1806 | 0 | 18 | 3.059690 | rRNA methylase | |
| smi_1805 | 0 | 18 | 3.032441 | FMN riboswitch (RFN element) | |
| smi_1804 | 0 | 16 | 3.071918 | hypothetical protein | |
| smi_1803 | 0 | 16 | 3.385421 | phosphatase | |
| smi_1802 | 0 | 15 | 2.778375 | hypothetical protein | |
| smi_1801 | 0 | 18 | 3.211196 | hypothetical protein | |
| smi_1800 | -1 | 14 | 0.111257 | T-box leader | |
| smi_1799 | -1 | 16 | -0.718524 | phenylalanyl-tRNA synthetase, alpha chain | |
| smi_1798 | 1 | 22 | -2.951108 | hypothetical protein | |
| smi_1797 | 1 | 30 | -6.808120 | phenylalanyl-tRNA synthetase, beta chain | |
| smi_1796 | 0 | 30 | -7.997393 | Na+ ABC transporter ATP-binding protein | |
| smi_1795 | 1 | 33 | -9.348456 | ABC transporter permease, Na+ export | |
| smi_1794 | 2 | 37 | -10.159646 | transposase, ISSmi1 | |
| smi_1793 | 2 | 37 | -10.148300 | 50S ribosomal protein L13 | |
| smi_1792 | 2 | 35 | -10.169653 | 30S ribosomal protein S9 | |
| smi_1791 | 1 | 33 | -9.813166 | integrase | |
| smi_1790 | 1 | 34 | -9.554792 | hypothetical protein | |
| smi_1789 | 1 | 32 | -9.582399 | hypothetical protein | |
| smi_1788 | 0 | 28 | -8.246200 | serine/threonine metallophosphatase | |
| smi_1787 | 1 | 27 | -8.191826 | Ser/Thr protein phosphatase | |
| smi_1786 | 0 | 30 | -7.310126 | hypothetical protein | |
| smi_1785.1 | 2 | 30 | -7.298191 | FtsK/SpoIIIE family protein | |
| smi_1785 | 1 | 28 | -7.220958 | hypothetical protein | |
| smi_1784 | 3 | 22 | -5.100402 | hypothetical protein | |
| smi_1783 | 2 | 19 | -2.782786 | hypothetical protein | |
| smi_1782 | 2 | 19 | -0.572307 | hypothetical protein | |
| smi_1781 | 3 | 19 | -0.381251 | hypothetical protein | |
| smi_1780 | 2 | 20 | -0.373276 | drug transporter, major facilitator superfamily | |
| smi_1779 | 2 | 22 | 1.515985 | transcriptional regulator | |
| smi_1778 | 3 | 26 | 2.141485 | integrase/recombinase, phage integrase family, | |
| smi_1777 | 3 | 24 | 0.738007 | integrase/recombinase, phage integrase family, | |
| smi_1776 | 3 | 20 | -1.543398 | ATPase | |
| smi_1775 | 3 | 23 | -1.425953 | oligopeptide permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1803 | GPOSANCHOR | 29 | 0.033 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1794 | PF08280 | 27 | 0.013 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1784 | TCRTETB | 113 | 2e-29 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 7 | smi_1749 | smi_1693 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1749 | -1 | 19 | 3.225657 | hypothetical protein | |
| smi_1748 | -1 | 20 | 2.589239 | DNA methylase | |
| smi_1747 | 0 | 23 | 2.846766 | hypothetical protein | |
| smi_1746 | 0 | 24 | 2.795198 | 6-phosphogluconate dehydrogenase, | |
| smi_1745 | 1 | 23 | 2.252566 | response regulator | |
| smi_1744 | 1 | 16 | 1.843439 | choline binding protein CbpF | |
| smi_1743 | -1 | 20 | 2.331833 | mevalonate kinase | |
| smi_1742 | -1 | 21 | 2.824403 | mevalonate pyrophosphate decarboxylase | |
| smi_1741 | -1 | 23 | 3.081643 | phosphomevalonate kinase | |
| smi_1740 | 0 | 23 | 2.515333 | isopentenyl-diphosphate:dimethylallyl | |
| smi_1739 | -1 | 23 | 2.693162 | hypothetical protein | |
| smi_1738 | -1 | 23 | 3.834116 | histidine kinase | |
| smi_1737 | 0 | 22 | 2.458974 | response regulator | |
| smi_1736 | 0 | 19 | 1.167561 | DNA alkylation repair enzyme, truncation | |
| smi_1735 | -2 | 15 | -0.520821 | FKBP-type peptidyl-prolyl cis-trans isomerase | |
| smi_1734 | -1 | 17 | -2.072519 | ATP-dependent exoDNAse (exonuclease V), alpha | |
| smi_1733 | 0 | 18 | -2.982784 | signal peptidase I | |
| smi_1732 | 1 | 28 | -6.644192 | ribonuclease HIII | |
| smi_1731 | -1 | 34 | -7.695244 | hypothetical protein | |
| smi_1730 | 0 | 29 | -6.311857 | hypothetical protein | |
| smi_1729 | 2 | 25 | -6.621971 | mismatch repair ATPase (MutS family) | |
| smi_1728 | 3 | 21 | -4.500714 | transcriptional regulator | |
| smi_1727 | 3 | 16 | -2.396231 | hypothetical protein | |
| smi_1726 | 3 | 14 | -1.432721 | HSP70 family protein | |
| smi_1725 | 2 | 12 | 0.205923 | dnaJ domain protein | |
| smi_1724 | 2 | 13 | -0.766823 | grpE domain protein | |
| smi_1723 | 1 | 15 | -0.718017 | hypothetical protein | |
| smi_1722 | 4 | 20 | -3.582772 | hypothetical protein | |
| smi_1721 | 4 | 25 | -6.104479 | choline binding domain Cbp6 | |
| smi_1720 | 5 | 28 | -6.708890 | choline binding protein cbp12 | |
| smi_1719 | 4 | 27 | -6.385581 | hypothetical protein | |
| smi_1718 | 5 | 26 | -5.618107 | Na+/alanine symporter | |
| smi_1717 | 5 | 25 | -5.031705 | hypothetical protein | |
| smi_1716 | 5 | 27 | -2.488440 | exfoliative toxin A | |
| smi_1714 | 6 | 27 | -2.347161 | TetR family transcriptional regulator | |
| smi_1713 | 6 | 28 | -1.634419 | ABC transporter ABC nucleotide-binding domain | |
| smi_1712 | 9 | 32 | -2.204298 | hypothetical protein | |
| smi_1711 | 8 | 33 | -1.394015 | site specific recombinase, authentic frame | |
| smi_1710 | 9 | 34 | -2.582102 | hypothetical protein | |
| smi_1709 | 8 | 35 | -7.375020 | site-specific recombinase | |
| smi_1708 | 7 | 37 | -7.844115 | nucleotidyltransferase | |
| smi_1707 | 9 | 40 | -9.824502 | methyltransferase | |
| smi_1706 | 7 | 42 | -11.190171 | streptomycin aminoglycoside 6-adenyltransferase | |
| smi_1705 | 6 | 45 | -11.834782 | streptothricin acetyltransferase | |
| smi_1704 | 4 | 44 | -12.161064 | aminoglycoside 3'-phosphotransferase | |
| smi_1703 | 4 | 30 | -7.544278 | hypothetical protein | |
| smi_1702 | 4 | 34 | -8.904986 | hypothetical protein | |
| smi_1701 | 2 | 31 | -7.738366 | acetyl transferase | |
| smi_1700 | 4 | 27 | -5.358287 | aminoglycoside acetyltransferase and | |
| smi_1699 | 4 | 26 | -3.936117 | hypothetical protein | |
| smi_1698 | 3 | 25 | -3.216219 | hypothetical protein | |
| smi_1697 | 4 | 25 | -1.622462 | hypothetical protein | |
| smi_1696 | 3 | 26 | 0.377914 | hypothetical protein | |
| smi_1695 | 2 | 25 | -0.137701 | hypothetical protein | |
| smi_1694 | 3 | 24 | -1.431943 | multidrug ABC transporter ATPase/permease | |
| smi_1693 | -1 | 25 | -3.288356 | AraC family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1749 | HTHFIS | 51 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1742 | PF06580 | 36 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1741 | HTHFIS | 66 | 4e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1730 | SHAPEPROTEIN | 129 | 9e-36 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1727 | 60KDINNERMP | 30 | 0.011 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1722 | ACRIFLAVINRP | 31 | 0.014 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1719 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1714 | PF03627 | 28 | 0.013 | PapG | |
>PF03627#PapG | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1709 | SACTRNSFRASE | 289 | e-103 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1705 | SACTRNSFRASE | 44 | 4e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1704 | SACTRNSFRASE | 34 | 8e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 8 | smi_1682 | smi_1653 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1682 | 2 | 16 | 2.773313 | aspartate kinase | |
| smi_1681 | 1 | 16 | 2.829929 | enoyl-CoA hydratase/carnithine racemase | |
| smi_1680 | 1 | 16 | 2.709516 | transcription regulator, MarR family | |
| smi_1679 | 0 | 16 | 3.201981 | 3-oxoacyl-ACP synthase III | |
| smi_1678 | -1 | 17 | 3.443406 | acyl carrier protein | |
| smi_1677 | -2 | 16 | 1.849852 | enoyl-ACP reductase II | |
| smi_1676 | -2 | 16 | 1.417677 | ACP S-malonyltransferase | |
| smi_1675 | -2 | 16 | 0.626585 | 3-oxoacyl-ACP reductase | |
| smi_1674 | 0 | 23 | -0.369699 | 3-oxoacyl-ACP synthase | |
| smi_1673 | 1 | 25 | -2.303923 | acetyl-CoA carboxylase | |
| smi_1672 | -1 | 26 | 0.294190 | 3-hydroxymyristoyl/3-hydroxydecanoyl-ACP | |
| smi_1671 | 0 | 32 | 2.832906 | acetyl-CoA carboxylase biotin carboxylase | |
| smi_1670 | 0 | 33 | 3.095890 | acetyl-CoA carboxylase subunit beta | |
| smi_1669 | 0 | 30 | 2.700789 | acetyl-CoA carboxylase carboxyl transferase | |
| smi_1668 | -2 | 26 | 3.669119 | excreted peptide | |
| smi_1667 | 3 | 16 | 4.324376 | metal-dependent CAAX amino terminal membrane | |
| smi_1666 | 2 | 11 | 2.137293 | transcription termination factor nusB | |
| smi_1665 | 2 | 14 | 1.143569 | hypothetical protein | |
| smi_1664 | 1 | 15 | 0.549571 | translation elongation factor P | |
| smi_1663 | 0 | 16 | -0.461728 | hypothetical protein | |
| smi_1662 | 1 | 19 | -1.822378 | glutamyl tRNA-Gln amidotransferase chain B | |
| smi_1661 | 1 | 23 | -6.119770 | glutamyl-tRNA(Gln) amidotransferase, A subunit | |
| smi_1660 | 1 | 27 | -6.269558 | glutamyl tRNA-Gln amidotransferase C subunit | |
| smi_1659 | 1 | 27 | -6.626119 | hypothetical protein | |
| smi_1658 | 2 | 26 | -6.519852 | peptide chain release factor 3 | |
| smi_1657 | 2 | 27 | -6.608404 | cell wall surface anchor family protein, Ser | |
| smi_1656 | 2 | 27 | -5.669813 | glycosyl transferase | |
| smi_1655 | 3 | 27 | -5.351194 | hypothetical protein | |
| smi_1654 | 2 | 21 | -3.200447 | hypothetical protein | |
| smi_1653 | 2 | 20 | -2.323959 | glycosyl transferase family 8 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1680 | DHBDHDRGNASE | 124 | 9e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1664 | CARBMTKINASE | 28 | 0.003 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1663 | TCRTETOQM | 232 | 4e-71 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1662 | ICENUCLEATIN | 92 | 2e-20 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1653 | SECYTRNLCASE | 139 | 3e-39 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| 9 | smi_1637 | smi_1598 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1637 | 0 | 25 | 3.162604 | hypothetical protein | |
| smi_1636 | 2 | 22 | -2.763350 | CorA-like Mg2+ transporter protein | |
| smi_1635 | 0 | 16 | -1.685108 | hypothetical protein | |
| smi_1634 | 0 | 12 | -1.786964 | hypothetical protein | |
| smi_1633 | -1 | 12 | -1.529383 | hypothetical protein | |
| smi_1632 | 0 | 12 | -1.999832 | nicotinic acid mononucleotide | |
| smi_1631 | 0 | 11 | -0.811149 | hypothetical protein | |
| smi_1630 | 0 | 11 | 3.074233 | hypothetical protein | |
| smi_1629 | -1 | 11 | 2.904468 | hypothetical protein | |
| smi_1628 | -2 | 13 | 3.677080 | hypothetical protein | |
| smi_1627 | -3 | 14 | 3.713905 | hypothetical protein | |
| smi_1626 | -2 | 17 | 3.758009 | hypothetical protein | |
| smi_1625 | -3 | 16 | 3.064860 | hypothetical protein | |
| smi_1624 | -2 | 18 | 2.578073 | hypothetical protein | |
| smi_1623 | -2 | 19 | 3.041796 | guanylate kinase | |
| smi_1622 | -2 | 19 | 3.309399 | DNA-dependent RNA Polymerase, omega subunit | |
| smi_1621 | -1 | 17 | 2.744314 | primosomal protein N' | |
| smi_1620 | 0 | 19 | 2.942857 | methionyl-tRNA formyltransferase | |
| smi_1619 | 0 | 22 | 3.173042 | 16S rRNA (cytosine(967)-C(5))-methyltransferase | |
| smi_1618 | 0 | 23 | 3.494819 | serine/threonine phosphatase | |
| smi_1617 | 1 | 27 | 3.130412 | serine/threonine protein kinase | |
| smi_1616 | 1 | 22 | 0.334981 | hypothetical protein | |
| smi_1615 | 1 | 20 | -2.183703 | hypothetical protein | |
| smi_1614 | -1 | 13 | -4.032451 | 3-hydroxy-3-methylglutaryl CoA synthase | |
| smi_1613 | 0 | 14 | -4.356129 | 3-hydroxy-3-methylglutaryl-coenzyme a reductase | |
| smi_1612 | 0 | 15 | -5.404927 | transcriptional regulator | |
| smi_1611 | 0 | 18 | -6.031821 | glycosyl hydrolases family 32 | |
| smi_1610 | 0 | 15 | -5.011349 | PTS system | |
| smi_1609 | -1 | 14 | -3.620554 | transcriptional regulator/sugar kinase | |
| smi_1608 | 0 | 15 | -3.566224 | hypothetical protein | |
| smi_1607 | -2 | 17 | -3.660064 | hypothetical protein | |
| smi_1606 | -2 | 15 | -2.737186 | hypothetical protein | |
| smi_1605 | -1 | 12 | -1.029643 | hypothetical protein | |
| smi_1604 | -1 | 14 | -0.123035 | type I restriction-modification system DNA | |
| smi_1603 | 0 | 24 | 2.720857 | hypothetical protein | |
| smi_1602 | 0 | 23 | 3.067510 | restriction endonuclease S subunit | |
| smi_1601 | 0 | 20 | 2.404796 | restriction endonuclease S subunit | |
| smi_1600 | 1 | 21 | 3.337072 | type I restriction-modification system | |
| smi_1599 | 0 | 18 | 3.708720 | type I restriction-modification system, helicase | |
| smi_1598 | -1 | 19 | 3.576812 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1637 | LPSBIOSNTHSS | 28 | 0.019 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1630 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1609 | BONTOXILYSIN | 31 | 0.017 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1608 | YERSSTKINASE | 30 | 0.019 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 10 | smi_1560 | smi_1525 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1560 | 1 | 21 | 3.004932 | hypothetical protein | |
| smi_1559 | 0 | 21 | 3.400308 | triose phosphate isomerase | |
| smi_1558 | -1 | 20 | 3.835755 | choline-binding protein LytC, | |
| smi_1557 | -2 | 19 | 3.400308 | DPS family peroxide resistance protein | |
| smi_1556 | -1 | 18 | 3.044201 | dihydrofolate reductase | |
| smi_1555 | -1 | 16 | 3.140598 | hypothetical protein | |
| smi_1554 | -2 | 14 | 2.417391 | ATP-dependent Clp protease ATP-binding subunit | |
| smi_1553 | -1 | 13 | 1.526376 | hypothetical protein | |
| smi_1552 | -1 | 15 | 1.546870 | hypothetical protein | |
| smi_1551 | -2 | 13 | 1.746548 | P-loop-containing kinase | |
| smi_1550 | -1 | 15 | 2.686701 | hypothetical protein | |
| smi_1549 | 0 | 20 | 2.398753 | hypothetical protein | |
| smi_1548 | -2 | 17 | 3.046467 | thioredoxin reductase | |
| smi_1547 | -1 | 18 | 3.553946 | hypothetical protein | |
| smi_1546 | -2 | 19 | 3.238602 | hypothetical protein | |
| smi_1545 | -2 | 20 | 3.249563 | phosphoglucosamine mutase | |
| smi_1544 | -2 | 19 | 2.795771 | hypothetical protein | |
| smi_1543 | 1 | 17 | 1.565527 | hypothetical protein | |
| smi_1542 | 2 | 20 | 0.934557 | 4-hydroxy-tetrahydrodipicolinate reductase | |
| smi_1541 | 2 | 19 | 0.786079 | tRNA nucleotidyltransferase | |
| smi_1540 | 2 | 18 | 0.361601 | ATPase component of ABC transporter with | |
| smi_1539 | 2 | 16 | 0.261605 | cation efflux family protein | |
| smi_1538 | 2 | 16 | 0.277201 | yybP-ykoY element | |
| smi_1537 | 1 | 14 | -0.326347 | cation-transporting ATPase, E1-E2 family | |
| smi_1536 | 1 | 17 | 0.535620 | polypeptide deformylase | |
| smi_1535 | 1 | 19 | 0.694375 | hypothetical protein | |
| smi_1534 | 1 | 19 | 0.847732 | hypothetical protein | |
| smi_1533 | 2 | 23 | 1.316970 | hypothetical protein | |
| smi_1532 | 2 | 22 | 1.684477 | cell wall surface anchor family protein | |
| smi_1531 | 2 | 23 | 2.587496 | N-acetyl-beta-hexosaminidase | |
| smi_1530 | 0 | 14 | 2.525274 | transposase | |
| smi_1529 | -1 | 17 | 2.955842 | transposase, IS1167 | |
| smi_1528 | -1 | 18 | 3.666721 | beta-galactosidase | |
| smi_1527 | -1 | 19 | 3.887869 | hypothetical protein | |
| smi_1526 | 3 | 23 | 2.965771 | transcriptional regulator | |
| smi_1525 | 2 | 19 | 2.446255 | cell wall surface anchor family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1555 | FERRIBNDNGPP | 29 | 0.019 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1540 | FLGMRINGFLIF | 30 | 3e-04 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1538 | V8PROTEASE | 74 | 1e-15 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1537 | GPOSANCHOR | 39 | 4e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1534 | GPOSANCHOR | 50 | 1e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1532 | PF05043 | 292 | 1e-95 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1531 | TONBPROTEIN | 51 | 2e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1529 | TCRTETA | 34 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1527 | FLGPRINGFLGI | 29 | 0.027 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| 11 | smi_1479 | smi_1457 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1479 | -2 | 15 | 3.309143 | response regulator | |
| smi_1478 | -2 | 16 | 3.299106 | histidine kinase | |
| smi_1477 | -2 | 21 | 3.516994 | hypothetical protein | |
| smi_1476 | -1 | 22 | 3.716560 | zinc metalloprotease | |
| smi_1475 | -1 | 20 | 2.033424 | chorismate binding enzyme para-aminobenzoate | |
| smi_1474 | -1 | 19 | 1.274010 | hypothetical protein | |
| smi_1473 | -1 | 16 | -1.012285 | choline binding protein Cbp11 | |
| smi_1472 | -1 | 16 | -1.645420 | glucose kinase | |
| smi_1471 | 0 | 20 | -4.075066 | thymidylate synthase | |
| smi_1470 | 0 | 26 | -6.404221 | hypothetical protein | |
| smi_1469 | 2 | 28 | -7.078677 | tRNA isopentenylpyrophosphate transferase | |
| smi_1468 | 1 | 28 | -7.108413 | hypothetical protein | |
| smi_1467 | 3 | 28 | -6.483487 | hypothetical protein | |
| smi_1466 | 2 | 24 | -5.705602 | hydrolase | |
| smi_1465 | 2 | 21 | -5.133764 | dehydrogenase | |
| smi_1464 | 1 | 18 | -4.333784 | transcriptional regulator | |
| smi_1463 | -1 | 16 | -4.217960 | hypothetical protein | |
| smi_1462 | -1 | 17 | -3.108281 | hypothetical protein | |
| smi_1461 | -3 | 17 | -2.814981 | choline binding protein Cbp10 | |
| smi_1460 | -3 | 17 | -3.628577 | hypothetical protein | |
| smi_1459 | -2 | 16 | -2.854791 | hypothetical protein | |
| smi_1458 | 1 | 14 | -0.817238 | hypothetical protein | |
| smi_1457 | 2 | 19 | 0.086535 | ATPases of the AAA+ class |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1478 | PF03309 | 35 | 3e-04 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1471 | DHBDHDRGNASE | 82 | 1e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1463 | HTHFIS | 36 | 8e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1458 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1457 | HTHFIS | 48 | 9e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 12 | smi_1447 | smi_1437 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1447 | 3 | 17 | -1.643935 | membrane GTPase TypA | |
| smi_1446 | 3 | 20 | -3.506396 | transposase, IS1167 | |
| smi_1445 | 4 | 26 | -6.093241 | hypothetical protein | |
| smi_1444 | 2 | 23 | -6.264924 | ABC transporter ATP-binding protein | |
| smi_1443 | 2 | 20 | -5.288748 | MurD D-glutamic acid adding enzyme | |
| smi_1442 | 2 | 17 | -3.863414 | MurG UDP-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc | |
| smi_1441 | 1 | 18 | -0.968917 | cell division protein DivIB | |
| smi_1440 | -1 | 16 | 1.304566 | orotidine-5'-phosphate decarboxylase | |
| smi_1439 | -1 | 19 | 2.790052 | orotate phosphoribosyltransferase | |
| smi_1438 | -2 | 17 | 3.040697 | hypothetical protein | |
| smi_1437 | -2 | 14 | 3.203147 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1447 | IGASERPTASE | 35 | 5e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1438 | PF05272 | 33 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 13 | smi_1342 | smi_1306 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1342 | 2 | 17 | -3.273359 | transcriptional regulator | |
| smi_1341 | 1 | 25 | -6.529954 | choline-binding protein Cbp9 | |
| smi_1340 | 3 | 30 | -5.550120 | glycerol uptake facilitator | |
| smi_1339 | 2 | 30 | -5.250257 | hypothetical protein | |
| smi_1338 | 1 | 26 | -5.687656 | hypothetical protein | |
| smi_1337 | 2 | 25 | -4.211988 | hypothetical protein | |
| smi_1336 | 1 | 25 | -3.381216 | transcriptional regulator | |
| smi_1335 | 1 | 25 | -3.239257 | GMP-synthase | |
| smi_1334 | 1 | 25 | -3.188345 | site-specific recombinase, phage integrase | |
| smi_1333 | 1 | 27 | -3.291936 | hypothetical protein | |
| smi_1332 | 1 | 27 | -2.921303 | polyribonucleotide nucleotidyltransferase | |
| smi_1331 | 0 | 26 | -4.349071 | hypothetical protein | |
| smi_1330 | 1 | 26 | -5.360203 | hypothetical protein | |
| smi_1329 | 1 | 25 | -5.946201 | transcriptional regulator, Tn916 | |
| smi_1328 | 0 | 24 | -5.267512 | hypothetical protein | |
| smi_1327 | 0 | 22 | -4.320340 | tetracycline resistance protein TetM | |
| smi_1326 | 0 | 22 | -4.092280 | hypothetical protein | |
| smi_1325 | 1 | 23 | -2.795174 | cell wall hydrolase, lytic transglycosylase | |
| smi_1324 | 1 | 23 | -5.491881 | transmembrane amino acid transporter protein | |
| smi_1323 | 0 | 26 | -7.584042 | ATP/GTP-binding protein | |
| smi_1322 | 1 | 27 | -7.307942 | hypothetical protein | |
| smi_1321 | 1 | 24 | -6.062223 | hypothetical protein | |
| smi_1320 | 1 | 25 | -6.315676 | hypothetical protein | |
| smi_1319 | 0 | 24 | -6.273675 | hypothetical protein | |
| smi_1318 | 0 | 22 | -4.710326 | hypothetical protein | |
| smi_1317 | 2 | 18 | -2.651348 | transcriptional regulator, Tn916 | |
| smi_1316 | 1 | 19 | -0.018441 | hypothetical protein | |
| smi_1315 | 1 | 22 | -1.052314 | hypothetical protein | |
| smi_1314 | 1 | 24 | 0.359088 | hypothetical protein | |
| smi_1313 | 2 | 25 | 1.214939 | hypothetical protein | |
| smi_1312 | 2 | 23 | 1.615374 | hypothetical protein | |
| smi_1311 | 4 | 27 | -0.363697 | hypothetical protein | |
| smi_1310 | 5 | 26 | -1.130941 | hypothetical protein | |
| smi_1309 | 5 | 25 | -0.991858 | peptidase | |
| smi_1308 | 4 | 22 | -0.960358 | proton-translocating ATPase, F0 sector, subunit | |
| smi_1307 | 4 | 22 | -1.481720 | proton-translocating ATPase, F0 sector, subunit | |
| smi_1306 | 3 | 21 | -1.605186 | proton-translocating ATPase, F0 sector, subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1334 | TCRTETOQM | 1101 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1306 | GPOSANCHOR | 46 | 2e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 14 | smi_1269 | smi_1248 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1269 | 2 | 16 | -0.608690 | permease | |
| smi_1268 | 1 | 20 | -3.098610 | Sec-independent protein translocase tatC | |
| smi_1267 | 2 | 24 | -4.878594 | Sec-independent protein translocase tatA | |
| smi_1266 | 0 | 33 | -7.268945 | hypothetical protein | |
| smi_1265 | 2 | 35 | -8.472738 | hypothetical protein | |
| smi_1263 | 5 | 39 | -10.920528 | 50S ribosomal protein L31 type B | |
| smi_1262 | 5 | 38 | -11.789238 | hypothetical protein | |
| smi_1261 | 1 | 26 | -8.729746 | flavodoxin | |
| smi_1260 | 0 | 19 | -5.251309 | chorismate mutase/prephenate dehydratase | |
| smi_1259 | 0 | 20 | -4.752939 | CrcB protein | |
| smi_1258 | 1 | 18 | -3.615846 | CrcB protein | |
| smi_1257 | -1 | 16 | -0.881615 | 50S ribosomal protein L19 | |
| smi_1256 | 1 | 12 | -1.569591 | *hypothetical protein | |
| smi_1255 | 0 | 14 | -2.921513 | hypothetical protein | |
| smi_1254 | -1 | 17 | -3.884528 | hypothetical protein | |
| smi_1253 | -1 | 18 | -4.636048 | site-specific recombinase, phage integrase | |
| smi_1252 | -2 | 17 | -4.446842 | transcriptional regulator | |
| smi_1251 | 0 | 20 | -5.498925 | hypothetical protein | |
| smi_1250 | -1 | 19 | -4.939629 | permease | |
| smi_1249 | -3 | 15 | -3.346766 | hydrolase | |
| smi_1248 | -4 | 14 | -3.206823 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1265 | FLGMOTORFLIM | 26 | 0.041 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1257 | TCRTETB | 29 | 0.024 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 15 | smi_1120 | smi_1088 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1120 | -3 | 15 | -3.613981 | peptide chain release factor I | |
| smi_1119 | 0 | 23 | -6.225900 | protoporphyrinogen oxidase | |
| smi_1118 | 2 | 32 | -8.702822 | hypothetical protein | |
| smi_1117 | 1 | 32 | -9.309906 | hypothetical protein | |
| smi_1116 | 0 | 32 | -9.299492 | serine hydroxymethyltransferase | |
| smi_1115 | 2 | 30 | -9.379495 | hypothetical protein | |
| smi_1114 | 1 | 31 | -9.589132 | hypothetical protein | |
| smi_1113 | 0 | 32 | -9.183339 | hypothetical protein | |
| smi_1112 | 2 | 29 | -8.317920 | 23S rRNA (uracil-5-)-methyltransferase RumA | |
| smi_1111 | 1 | 25 | -6.205421 | hypothetical protein | |
| smi_1110 | 0 | 21 | -5.348113 | hypothetical protein | |
| smi_1109 | 0 | 19 | -4.061156 | hypothetical protein | |
| smi_1108 | 0 | 18 | -3.004241 | hypothetical protein | |
| smi_1107 | 0 | 18 | -3.206193 | hypothetical protein | |
| smi_1106 | 0 | 21 | -3.517255 | hypothetical protein | |
| smi_1105 | -1 | 21 | -4.903908 | hypothetical protein | |
| smi_1104 | 0 | 25 | -6.071906 | aminoglycoside 6'-N-acetyltransferase | |
| smi_1103 | 1 | 34 | -8.822737 | hypothetical protein | |
| smi_1102 | 0 | 34 | -9.536990 | hypothetical protein | |
| smi_1101 | -1 | 33 | -9.562776 | hypothetical protein | |
| smi_1100 | -1 | 34 | -11.105468 | hypothetical protein | |
| smi_1099 | -1 | 34 | -11.119460 | hydrolase | |
| smi_1098 | -1 | 35 | -11.348625 | hypothetical protein | |
| smi_1097 | -1 | 32 | -9.478299 | neopullulanase | |
| smi_1096 | -1 | 32 | -9.045788 | hypothetical protein | |
| smi_1095 | 0 | 31 | -9.007378 | transcriptional regulator | |
| smi_1094 | 1 | 29 | -8.043716 | hypothetical protein | |
| smi_1093 | 2 | 28 | -7.698883 | hypothetical protein | |
| smi_1092 | 2 | 22 | -6.175238 | hypothetical protein | |
| smi_1091 | 2 | 19 | -6.132692 | hypothetical protein | |
| smi_1090 | 1 | 15 | -5.109094 | hypothetical protein | |
| smi_1089 | 1 | 18 | 0.381750 | hypothetical protein | |
| smi_1088 | 2 | 22 | 0.545161 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1120 | THERMOLYSIN | 28 | 0.043 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1112 | V8PROTEASE | 34 | 0.001 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1111 | SACTRNSFRASE | 38 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1100 | PF05211 | 32 | 0.002 | Neuraminyllactose-binding hemagglutinin | |
>PF05211#Neuraminyllactose-binding hemagglutinin | |||||
| 16 | smi_1046 | smi_1028 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1046 | 2 | 34 | 0.578459 | hypothetical protein | |
| smi_1045 | 1 | 31 | -0.605813 | dihydroxyacetone kinase | |
| smi_1044 | 1 | 28 | -0.725685 | dihydroxyacetone kinase | |
| smi_1043 | 0 | 28 | -0.776146 | transcriptional regulator | |
| smi_1042 | -3 | 23 | -1.507439 | dihydroxyacetone kinase | |
| smi_1041 | -3 | 18 | -2.612899 | hypothetical protein | |
| smi_1040 | -2 | 18 | -3.278328 | hypothetical protein | |
| smi_1039 | -2 | 18 | -3.282259 | phosphoenolpyruvate-protein phosphotransferase, | |
| smi_1038 | -3 | 18 | -4.169488 | phosphocarrier protein HPr | |
| smi_1037 | 1 | 25 | -5.775747 | glutaredoxin-like protein | |
| smi_1036 | 1 | 25 | -5.902393 | ribonucleoside-diphosphate reductase 2, alpha | |
| smi_1035 | -1 | 25 | -5.363419 | ribonucleoside-diphosphate reductase 2, beta | |
| smi_1034 | -2 | 21 | -3.053667 | s system repressor | |
| smi_1033 | -1 | 22 | -1.965965 | hypothetical protein | |
| smi_1032 | 1 | 29 | -1.296817 | 6-phospho-beta-galactosidase | |
| smi_1031 | 3 | 32 | -0.477964 | PTS system, lactose-specific IIBC component | |
| smi_1030 | 2 | 27 | -0.747468 | PTS system, lactose-specific IIA component | |
| smi_1029 | 2 | 36 | -0.400925 | transcription antiterminator LacT | |
| smi_1028 | 2 | 34 | -0.611815 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1046 | PHPHTRNFRASE | 806 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1031 | FERRIBNDNGPP | 29 | 0.007 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1028 | BINARYTOXINA | 28 | 0.033 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
| 17 | smi_1010 | smi_1002 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1010 | 4 | 25 | 0.424922 | hypothetical protein | |
| smi_1009 | 4 | 29 | 0.563716 | farnesyl diphosphate synthase | |
| smi_1008 | 0 | 19 | -0.220416 | exodeoxyribonuclease VII, small subunit | |
| smi_1007 | 4 | 29 | -1.135161 | exodeoxyribonuclease VII, large subunit | |
| smi_1006 | 4 | 29 | -1.460073 | Uridine kinase | |
| smi_1005 | 3 | 28 | -1.586088 | tRNA pseudouridine synthase B | |
| smi_1004 | 3 | 26 | -1.670179 | hypothetical protein | |
| smi_1003 | 3 | 25 | -1.596494 | O-acetylhomoserine sulfhydrylase | |
| smi_1002 | 5 | 31 | -1.540100 | formate/nitrate transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1002 | GPOSANCHOR | 57 | 2e-09 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 18 | smi_0984 | smi_0979 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0984 | 4 | 21 | -0.718091 | DNA primase | |
| smi_0983 | 5 | 21 | -0.355852 | ABC transporter ATP-binding protein | |
| smi_0982 | 4 | 20 | 0.309734 | ABC transporter, membrane-spanning permease | |
| smi_0981 | 2 | 15 | 0.699328 | ABC transporter substrate-binding protein | |
| smi_0980 | 3 | 18 | 0.645930 | T-box leader | |
| smi_0979 | 3 | 18 | 0.838604 | transposase, ISSmi1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0984 | VACCYTOTOXIN | 31 | 0.009 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0980 | DPTHRIATOXIN | 30 | 0.019 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0979 | FLAGELLIN | 34 | 0.003 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 19 | smi_0849 | smi_0835 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0849 | 3 | 24 | -2.713720 | 4-methyl-5(b-hydroxyethyl)-thiazole | |
| smi_0848 | 0 | 23 | -3.621852 | rod shape determining protein RodA | |
| smi_0847 | 0 | 12 | -0.066503 | ATP-dependent helicase DinG | |
| smi_0846 | 0 | 11 | 1.128540 | protease | |
| smi_0845 | -1 | 10 | 1.163135 | hypothetical protein | |
| smi_0844 | -1 | 11 | 1.123099 | histidine kinase | |
| smi_0843 | -1 | 13 | 1.380259 | response regulator | |
| smi_0842 | -1 | 14 | 1.458731 | aminopeptidase N | |
| smi_0841 | -1 | 13 | -0.189462 | hypothetical protein | |
| smi_0840 | -2 | 16 | -3.510256 | hypothetical protein | |
| smi_0839 | -1 | 18 | -3.309274 | hypothetical protein | |
| smi_0838 | -2 | 20 | -4.741512 | hypothetical protein | |
| smi_0837 | -1 | 23 | -7.065851 | short chain dehydrogenase | |
| smi_0836 | -2 | 20 | -6.282632 | hypothetical protein | |
| smi_0835 | -2 | 15 | -3.959357 | oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0849 | UREASE | 25 | 0.043 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0845 | DHBDHDRGNASE | 92 | 2e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0839 | RTXTOXIND | 44 | 5e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 20 | smi_0815 | smi_0771 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0815 | 3 | 21 | -0.649626 | hypothetical protein | |
| smi_0814 | 5 | 27 | -1.395518 | peptidyl-prolyl cis-trans isomerase | |
| smi_0813 | 6 | 34 | -2.562873 | ABC transporter ATP-binding protein | |
| smi_0812 | 5 | 33 | -3.279120 | VanZ-related protein | |
| smi_0811 | 3 | 33 | -3.465171 | 23S rRNA (adenine(2503)-C(2))-methyltransferase | |
| smi_0810 | 1 | 31 | -2.884379 | hypothetical protein | |
| smi_0809 | 1 | 30 | -4.289602 | superoxide dismutase | |
| smi_0808 | 1 | 34 | -5.602535 | DNA polymerase III, delta subunit | |
| smi_0807 | 1 | 34 | -6.262555 | dihydroorotate dehydrogenase | |
| smi_0806 | 1 | 34 | -5.405487 | glutamate dehydrogenase | |
| smi_0805 | 1 | 35 | -6.887442 | transposase, ISSsu4 | |
| smi_0804 | 2 | 37 | -9.336770 | transposase, ISSsu4, authentic frameshift | |
| smi_0803 | 1 | 36 | -8.978302 | transposase, ISSsu4, authentic frameshift | |
| smi_0802 | 0 | 31 | -7.107284 | hypothetical protein | |
| smi_0801 | 0 | 32 | -6.871439 | transposase, ISSsu4, authentic frameshift | |
| smi_0800 | 0 | 29 | -6.742910 | transposase, ISSsu4, authentic frameshift | |
| smi_0799 | 2 | 31 | -5.592841 | ATP synthase, subunit D | |
| smi_0798 | 3 | 30 | -5.306820 | V-type H+-ATPase, subunit B | |
| smi_0797 | 3 | 30 | -5.077358 | V-type H+-ATPase, subunit A | |
| smi_0796 | 2 | 28 | -5.889335 | V-type H+-ATPase, subunit F | |
| smi_0795 | 2 | 27 | -5.358423 | V-type H+-ATPase, subunit C | |
| smi_0794 | 1 | 29 | -6.212384 | V-type H+-ATPase, subunit E | |
| smi_0793 | 0 | 29 | -6.696806 | V-type H+-ATPase, subunit K | |
| smi_0792 | 1 | 28 | -5.147210 | V-type H+-ATPase, subunit I | |
| smi_0791 | 4 | 30 | -4.970973 | hypothetical protein | |
| smi_0790 | 4 | 28 | -4.759206 | transcriptional regulator | |
| smi_0789 | 2 | 28 | -4.292278 | oxidoreductase, GFO/IDH/MOCA family | |
| smi_0788 | 1 | 28 | -2.716651 | hypothetical protein | |
| smi_0787 | 2 | 20 | -0.044194 | sodium:solute symporter family protein | |
| smi_0786 | 2 | 28 | 2.100305 | N-acetylneuraminate lyase | |
| smi_0785 | 3 | 34 | 4.215659 | N-acetylmannosamine-6-phosphate epimerase | |
| smi_0784 | 3 | 37 | 4.710840 | transcriptional regulator | |
| smi_0783 | 3 | 35 | 4.407620 | metal-dependent CAAX amino terminal membrane | |
| smi_0782 | 1 | 34 | 4.045445 | hypothetical protein | |
| smi_0781 | 1 | 29 | 3.489720 | hypothetical protein | |
| smi_0780 | 0 | 24 | 2.993975 | hypothetical protein | |
| smi_0779 | -1 | 20 | 2.966106 | methyl transferase | |
| smi_0778 | -1 | 15 | 2.480649 | hypothetical protein | |
| smi_0777 | 0 | 15 | 2.223458 | hypothetical protein | |
| smi_0776 | -1 | 13 | 0.523113 | 50S ribosomal protein L7/L12 | |
| smi_0775 | -2 | 14 | -1.176463 | 50S ribosomal protein L10 | |
| smi_0774 | -1 | 12 | -2.115848 | transposase, ISSmi1 | |
| smi_0773 | -1 | 14 | -3.119019 | transposase, ISSmi1 | |
| smi_0772 | 1 | 17 | -3.734184 | transposase, ISSmi1 | |
| smi_0771 | 0 | 16 | -3.010651 | transposase, ISSmi1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0810 | IGASERPTASE | 34 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0778 | UREASE | 37 | 9e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0772 | BACINVASINB | 28 | 0.033 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| 21 | smi_0760 | smi_0733 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0760 | 0 | 18 | 3.879508 | glycosyl transferase | |
| smi_0759 | -1 | 18 | 3.478067 | glycosyl transferase | |
| smi_0758 | -1 | 16 | 2.630077 | phosphorylcholine transferase LicD3 | |
| smi_0757 | 2 | 18 | 1.240516 | transcriptional regulator | |
| smi_0756 | 2 | 18 | 0.737224 | prephenate dehydratase | |
| smi_0755 | 0 | 18 | 1.145738 | shikimate kinase | |
| smi_0754 | -2 | 16 | 1.581913 | 3-phosphoshikimate 1-carboxyvinyltransferase | |
| smi_0753 | -2 | 18 | 1.756355 | hypothetical protein | |
| smi_0752 | -2 | 17 | 2.487738 | hypothetical protein | |
| smi_0751 | -2 | 19 | 3.215075 | prephenate dehydrogenase | |
| smi_0750 | -2 | 22 | 3.313421 | chorismate synthase, | |
| smi_0749 | -1 | 23 | 3.133977 | 3-dehydroquinate synthase | |
| smi_0748 | 0 | 30 | 3.083543 | shikimate 5-dehydrogenase | |
| smi_0747 | -2 | 27 | 3.336312 | 3-dehydroquinase | |
| smi_0746 | -2 | 23 | 2.450330 | hypothetical protein | |
| smi_0745 | -1 | 23 | 2.966359 | phosphoglycerol transferase and related | |
| smi_0744 | -1 | 22 | 3.184171 | hypothetical protein | |
| smi_0743 | -2 | 16 | 2.723737 | ABC transporter ATP-binding protein | |
| smi_0742 | -1 | 15 | 2.103088 | alpha-amylase | |
| smi_0741 | 0 | 16 | 1.922665 | alanyl-tRNA synthetase | |
| smi_0740 | 0 | 18 | 2.225096 | hypothetical protein | |
| smi_0739 | 0 | 18 | 2.248942 | transposase, ISSmi1 | |
| smi_0738 | -2 | 18 | 2.191880 | ABC transporter, spermidine/putrescine-binding | |
| smi_0737 | -1 | 22 | 3.007476 | ABC-transporter, spermidine/putrescine transport | |
| smi_0736 | 0 | 19 | 3.669271 | ABC-transporter, spermidine/putrescine transport | |
| smi_0735 | 2 | 18 | 3.803411 | ABC transporter, ATP-binding | |
| smi_0734 | 3 | 17 | 3.943809 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
| smi_0733 | 2 | 19 | 3.224332 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0757 | UREASE | 29 | 0.035 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0746 | MYCMG045 | 51 | 4e-09 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0738 | ADHESNFAMILY | 31 | 0.005 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| 22 | smi_0710 | smi_0694 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0710 | 1 | 21 | -5.051344 | hypothetical protein | |
| smi_0709 | 2 | 19 | -4.698536 | prolipoprotein diacylglycerol transferase | |
| smi_0708 | 2 | 18 | -4.663615 | Hpr(Ser) kinase/phosphatase | |
| smi_0707 | 3 | 17 | -4.561706 | 30S ribosomal protein S21 | |
| smi_0706 | 3 | 19 | -4.834799 | N-acetylglucosamine-6-phosphate isomerase | |
| smi_0705 | 3 | 18 | -4.651990 | S-adenosylmethionine:tRNA | |
| smi_0703 | 1 | 22 | -1.327614 | ribonuclease BN | |
| smi_0702 | 0 | 23 | -1.936325 | Na+/H+ antiporter | |
| smi_0701 | 2 | 24 | -5.665095 | hypothetical protein | |
| smi_0700 | 0 | 26 | -6.164653 | hypothetical protein | |
| smi_0699 | -1 | 15 | -3.262285 | hypothetical protein | |
| smi_0698 | -1 | 14 | -2.631693 | hypothetical protein | |
| smi_0697 | -2 | 11 | -1.023950 | hypothetical protein | |
| smi_0696 | -1 | 10 | -0.742847 | cell wall-associated serine proteinase | |
| smi_0695 | 1 | 14 | 1.466468 | *ABC transporter permease | |
| smi_0694 | 2 | 15 | 1.162095 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0705 | SUBTILISIN | 93 | 5e-22 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0698 | TOXICSSTOXIN | 25 | 0.035 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0694 | PF06580 | 31 | 0.009 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 23 | smi_0669 | smi_0638 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0669 | 0 | 14 | 3.519478 | phosphomethylpyrimidine kinase | |
| smi_0668 | 0 | 18 | 4.294587 | tRNA pseudouridine synthase A | |
| smi_0667 | 0 | 25 | 4.751553 | major facilitator superfamily | |
| smi_0666 | 0 | 24 | 4.421457 | hypothetical protein | |
| smi_0665 | 0 | 23 | 4.035315 | PhnA protein, required for expression of the | |
| smi_0664 | -1 | 20 | 3.064741 | cytidylate kinase | |
| smi_0663 | 0 | 21 | 3.062048 | hypothetical protein | |
| smi_0662 | 0 | 19 | 2.476938 | ferredoxin | |
| smi_0661 | -2 | 14 | 1.655356 | glycosyl transferase | |
| smi_0660 | 0 | 16 | 1.423613 | UDP-glucose 4-epimerase | |
| smi_0659 | -1 | 16 | 0.843866 | hypothetical protein | |
| smi_0658 | 0 | 24 | 2.981652 | hypothetical protein | |
| smi_0657 | 0 | 21 | 1.265585 | hypothetical protein | |
| smi_0656 | 2 | 20 | -1.348647 | Bcl-2 family protein | |
| smi_0655 | 0 | 14 | -1.276810 | P-type ATPase-metal cation transport | |
| smi_0654 | 0 | 11 | -0.823792 | transposase, ISSmi1 | |
| smi_0653 | -1 | 13 | -0.220408 | 1-acylglycerol-3-phosphate O-acyltransferase | |
| smi_0652 | -1 | 17 | -1.381947 | esterase of alpha/beta hydrolase superfamily | |
| smi_0651 | 0 | 19 | 0.068352 | iron(III) dicitrate-binding lipoprotein | |
| smi_0650 | 2 | 25 | 2.565777 | ABC-transporter, Fe3+-siderophore, ATP-binding | |
| smi_0649 | 3 | 26 | 2.859146 | ABC-transporter Fe3+-siderophore, permease | |
| smi_0648 | 4 | 25 | 2.860733 | 30S ribosomal protein S15 | |
| smi_0647 | 1 | 23 | 3.754021 | hypothetical protein | |
| smi_0646 | 0 | 22 | 3.433048 | hypothetical protein | |
| smi_0645 | 0 | 24 | 3.481573 | Threonyl-tRNA synthetase, threonine-tRNA ligase | |
| smi_0644 | -2 | 18 | 3.516139 | hypothetical protein | |
| smi_0643 | -2 | 13 | 1.820450 | ABC transporter ATP-binding protein | |
| smi_0642 | 0 | 11 | -0.051182 | histidine kinase | |
| smi_0641 | 0 | 18 | -1.735400 | response regulator | |
| smi_0640 | 1 | 17 | -1.284393 | hypothetical protein | |
| smi_0639 | 0 | 18 | -2.116779 | hypothetical protein | |
| smi_0638 | 0 | 23 | -3.690473 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0668 | NUCEPIMERASE | 183 | 2e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0659 | ADHESNFAMILY | 31 | 0.008 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0649 | HTHFIS | 79 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 24 | smi_0599 | smi_0586 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0599 | -1 | 18 | 3.101904 | hypothetical protein | |
| smi_0598 | -1 | 20 | 3.586812 | hypothetical protein | |
| smi_0597 | 0 | 19 | 3.804014 | ABC transporter-sugar transport, | |
| smi_0596 | -1 | 19 | 4.215648 | ABC transporter permease-sugar transport, | |
| smi_0594 | -2 | 16 | 3.844625 | ABC transporter, sugar transporter, sugar | |
| smi_0593 | -2 | 18 | 3.008093 | N-acetylmannosamine-6-phosphate 2-epimerase 2 | |
| smi_0592 | -1 | 19 | 1.848860 | sialidase A (neuraminidase A) | |
| smi_0591 | 0 | 20 | 2.122443 | acetyl xylan esterase | |
| smi_0590 | 1 | 19 | 2.274947 | hypothetical protein | |
| smi_0589 | 1 | 19 | 2.426495 | hypothetical protein | |
| smi_0588 | -1 | 17 | 2.177011 | transposase | |
| smi_0587 | -2 | 16 | 2.450016 | transposase | |
| smi_0586 | -2 | 17 | 3.059058 | branch migration of Holliday junctions, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0593 | ALARACEMASE | 354 | e-123 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0589 | SECA | 1055 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0586 | TCRTETOQM | 38 | 9e-05 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 25 | smi_0575 | smi_0539 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0575 | -1 | 28 | 4.167568 | chromosome replication initiation | |
| smi_0574 | 0 | 31 | 4.039224 | transcriptional regulator | |
| smi_0573 | 1 | 26 | 4.426997 | GntR family transcriptional regulator | |
| smi_0572 | 1 | 25 | 4.364787 | ABC transporter, ATP binding domain, ABC-type | |
| smi_0571 | 1 | 18 | 2.424394 | ABC transporter permease | |
| smi_0570 | -2 | 14 | 3.031388 | ABC exporter ATP binding/membrane-spanning | |
| smi_0569 | 0 | 14 | 2.654457 | LrgB family protein | |
| smi_0568 | -1 | 14 | 3.559959 | effector of murein hydrolase, LrgA family | |
| smi_0567 | -2 | 13 | 3.313414 | transcriptional regulator | |
| smi_0566 | 0 | 16 | 3.094759 | hypothetical protein | |
| smi_0565 | 1 | 21 | 4.977967 | thioredoxin | |
| smi_0564 | 0 | 20 | 4.224746 | 7-cyano-7-deazaguanine synthase QueC | |
| smi_0563 | -1 | 18 | 3.651414 | 6-pyruvoyl-tetrahydropterin synthase | |
| smi_0562 | -1 | 20 | 2.828902 | 7-cyano-7-deazaguanosine (preQ0) biosynthesis | |
| smi_0561 | 0 | 18 | -0.756838 | 7-cyano-7-deazaguanine reductase | |
| smi_0560 | 0 | 17 | -0.722363 | aquaporin Z-water channel protein | |
| smi_0558 | -1 | 18 | -4.607675 | acetoin reductase | |
| smi_0557 | -2 | 17 | -4.706852 | hypothetical protein | |
| smi_0556 | -2 | 22 | -6.632028 | oligoendopeptidase F | |
| smi_0555 | -1 | 25 | -7.209634 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | |
| smi_0554 | -1 | 32 | -4.182156 | ribosomal protein methyltransferase | |
| smi_0553 | 3 | 23 | -2.730230 | 7,8-dihydro-8-oxoguanine-triphosphatase | |
| smi_0552 | 1 | 21 | 0.136633 | hypothetical protein | |
| smi_0551 | 0 | 17 | 2.417525 | chromosome segregation helicase, ATPase, AAA | |
| smi_0550 | 1 | 15 | 3.603304 | *transcriptional regulator | |
| smi_0549 | 0 | 16 | 4.041745 | NADPH:quinone reductase and related Zn-dependent | |
| smi_0548 | 0 | 15 | 4.217338 | hypothetical protein | |
| smi_0547 | 0 | 15 | 4.112622 | transcriptional activator, Mga-like regulatory | |
| smi_0546 | -1 | 14 | 3.759992 | hypothetical protein | |
| smi_0545 | -1 | 16 | 2.817723 | hypothetical protein | |
| smi_0544 | -2 | 14 | 2.730638 | hypothetical protein | |
| smi_0543 | -2 | 15 | 2.781774 | general stress protein 24 | |
| smi_0542 | -2 | 18 | 2.878904 | hypothetical protein | |
| smi_0541 | -2 | 21 | 3.284686 | acetyltransferase, GNAT family | |
| smi_0540 | -2 | 22 | 3.296445 | type II secretory pathway, prepilin signal | |
| smi_0539 | -2 | 22 | 3.077725 | tryptophan synthase alpha chain |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0567 | DHBDHDRGNASE | 133 | 5e-40 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0560 | PF05272 | 30 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0555 | PF05043 | 611 | 0.0 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0548 | PREPILNPTASE | 74 | 4e-18 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0541 | PERTACTIN | 31 | 0.010 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| 26 | smi_0529 | smi_0521 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0529 | 0 | 18 | -3.537611 | ABC transporter, ATP-binding domain/permease, | |
| smi_0528 | 0 | 20 | -4.544978 | ABC transporter, ATP-binding domain/permease, | |
| smi_0527 | 0 | 22 | -4.821200 | hypothetical protein | |
| smi_0526 | 0 | 21 | -4.244369 | hypothetical protein | |
| smi_0525 | -2 | 16 | -2.245160 | hypothetical protein | |
| smi_0524 | -3 | 12 | 0.586289 | transcriptional regulator, ArsR family | |
| smi_0523 | -3 | 14 | 1.567384 | metal-dependent membrane protease, CAAX amino | |
| smi_0522 | -3 | 18 | 3.178423 | exodeoxyribonuclease III | |
| smi_0521 | -2 | 19 | 3.113154 | hypothetical protein |
| 27 | smi_0477 | smi_0411 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0477 | 3 | 19 | 0.390115 | hypothetical protein | |
| smi_0476 | 1 | 18 | -0.701398 | transcriptional regulators, MutR family | |
| smi_0475 | 2 | 22 | -0.250987 | transcriptional regulatory protein | |
| smi_0474 | 2 | 19 | 0.226769 | hypothetical protein | |
| smi_0473 | 3 | 19 | 0.028487 | CH60_SMI 60 kDa chaperonin (protein Cpn60) | |
| smi_0472 | 4 | 19 | 0.569932 | CH10_SMI 10 kDa chaperonin (protein Cpn10) | |
| smi_0471 | 4 | 18 | 0.255112 | single-stranded DNA-binding protein | |
| smi_0470 | 3 | 18 | 0.765016 | transposase, ISSmi2 | |
| smi_0469 | 1 | 16 | 0.113723 | N-acetylmuramoyl-L-alanine amidase LytA | |
| smi_0468 | 0 | 15 | -0.488728 | antiholin | |
| smi_0467 | 0 | 16 | 0.867006 | hypothetical protein | |
| smi_0466 | -1 | 16 | 0.827893 | hypothetical protein | |
| smi_0465 | -1 | 16 | 0.914588 | hypothetical protein | |
| smi_0464 | 0 | 15 | 1.005983 | hypothetical protein | |
| smi_0463 | 2 | 15 | 1.288824 | hypothetical protein | |
| smi_0462 | 3 | 15 | 1.172484 | hypothetical protein | |
| smi_0461 | 1 | 19 | 0.340761 | structural phage protein | |
| smi_0460 | 2 | 20 | 0.142181 | tail fiber protein | |
| smi_0459 | 2 | 20 | 0.548936 | hypothetical protein | |
| smi_0458 | 2 | 22 | 0.477730 | phage Mu protein gp47 | |
| smi_0457 | 4 | 19 | 0.060979 | hypothetical protein | |
| smi_0456 | 4 | 20 | 0.866471 | hypothetical protein | |
| smi_0455 | 5 | 22 | -0.508811 | hypothetical protein | |
| smi_0454 | 5 | 25 | -1.084036 | LysM | |
| smi_0453 | 5 | 27 | -2.636271 | tail length tape measure protein | |
| smi_0452 | 5 | 25 | -2.894041 | hypothetical protein | |
| smi_0451 | 1 | 23 | -4.527524 | core tail protein | |
| smi_0450 | 1 | 21 | -3.300151 | sheath tail protein | |
| smi_0449 | 2 | 20 | -2.285935 | hypothetical protein | |
| smi_0448 | 2 | 18 | -1.047858 | hypothetical protein | |
| smi_0447 | 3 | 18 | -0.767661 | prophage pi2 protein | |
| smi_0446 | 3 | 19 | -0.613281 | hypothetical protein | |
| smi_0445 | 3 | 19 | -0.095533 | hypothetical protein | |
| smi_0444 | 3 | 19 | 0.408396 | hypothetical protein | |
| smi_0443 | 3 | 22 | 1.454217 | main capsid protein Gp34-like protein | |
| smi_0442 | 1 | 20 | -0.248617 | methyl-accepting chemotaxis protein scaffolding | |
| smi_0440 | 0 | 21 | -0.756838 | hypothetical protein | |
| smi_0439 | 3 | 21 | -0.186663 | hypothetical protein | |
| smi_0438 | 2 | 18 | -1.903335 | hypothetical protein | |
| smi_0437 | 2 | 19 | -4.743976 | hypothetical protein | |
| smi_0436 | 1 | 24 | -5.658502 | hypothetical protein | |
| smi_0435 | 2 | 23 | -4.897569 | NAD+-asparagine ADP-ribosyltransferase | |
| smi_0433 | 2 | 27 | -4.654435 | serine protein kinase | |
| smi_0432 | 2 | 31 | -5.773340 | terminase large subunit | |
| smi_0431 | 2 | 30 | -4.290063 | small terminase | |
| smi_0430 | 4 | 22 | -2.263248 | *hypothetical protein | |
| smi_0429 | 4 | 20 | -1.718807 | transcriptional regulator, AbrB family | |
| smi_0428 | 3 | 19 | -1.839748 | transcriptional regulator | |
| smi_0427 | 3 | 20 | -1.448662 | hypothetical protein | |
| smi_0426 | 4 | 21 | -1.148773 | hypothetical protein | |
| smi_0425 | 4 | 20 | -1.264879 | DNA-binding protein | |
| smi_0424 | 2 | 21 | -1.103714 | hypothetical protein | |
| smi_0423 | 4 | 23 | -1.106528 | hypothetical protein | |
| smi_0422 | 4 | 21 | -0.284862 | hypothetical protein | |
| smi_0421 | 2 | 21 | -1.135941 | prophage Pi3 protein | |
| smi_0420 | 1 | 20 | -2.193511 | hypothetical protein | |
| smi_0419 | 0 | 26 | -2.796054 | hypothetical protein | |
| smi_0418 | 0 | 26 | -5.154001 | hypothetical protein | |
| smi_0417 | 0 | 25 | -4.793535 | hypothetical protein | |
| smi_0416 | 0 | 26 | -5.504119 | hypothetical protein | |
| smi_0415 | 0 | 29 | -5.038068 | hypothetical protein | |
| smi_0414 | 0 | 26 | -4.660824 | hypothetical protein | |
| smi_0413 | 0 | 26 | -4.038088 | Helicase | |
| smi_0412 | 3 | 27 | -3.268380 | ATPase involved in DNA replication initiation | |
| smi_0411 | 2 | 20 | -2.082502 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0473 | BCTERIALGSPD | 26 | 0.031 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0462 | cloacin | 35 | 8e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0445 | SALSPVBPROT | 46 | 3e-07 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0422 | SECA | 33 | 0.003 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0418 | CHLAMIDIAOMP | 28 | 9e-04 | Chlamydia major outer membrane protein signature. | |
>CHLAMIDIAOMP#Chlamydia major outer membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0414 | PF05932 | 27 | 0.003 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| 28 | smi_0396 | smi_0366 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0396 | 1 | 25 | -5.016410 | phenylalanyl-tRNA synthetase, beta subunit | |
| smi_0395 | 1 | 27 | -6.136453 | hypothetical protein | |
| smi_0394 | -1 | 14 | -2.849884 | hypothetical protein | |
| smi_0393 | 0 | 14 | -3.159218 | choline-binding protein Cbp5 | |
| smi_0392 | 0 | 15 | -2.508402 | CTP synthase (UTP--ammonia ligase) | |
| smi_0391 | -1 | 13 | -1.504010 | DNA-dependent RNA Polymerase, delta subunit | |
| smi_0390 | 0 | 15 | 1.681199 | transposase, ISSmi1 | |
| smi_0389 | 2 | 26 | 3.986292 | ABC transporter permease | |
| smi_0388 | 0 | 18 | 2.212123 | ABC transporter ATP-binding protein | |
| smi_0387 | -1 | 20 | 3.439591 | TetR family transcriptional regulator | |
| smi_0386 | -2 | 18 | 2.267978 | hypothetical protein | |
| smi_0385 | -1 | 19 | 2.453039 | DNA or RNA helicases of superfamily II | |
| smi_0384 | 2 | 21 | 3.874945 | cell filamentation protein Fic-related protein | |
| smi_0383 | 1 | 18 | 3.854113 | hypothetical protein | |
| smi_0382 | 4 | 23 | 3.575535 | molecular chaperone, HSP90 family | |
| smi_0381 | 5 | 26 | 3.332367 | type II DNA modification enzyme | |
| smi_0380 | 4 | 26 | 3.519821 | valyl-tRNA synthetase | |
| smi_0379 | 3 | 25 | 3.427973 | shikimate kinase | |
| smi_0378 | -2 | 23 | 2.076770 | acetyltransferase, GNAT family | |
| smi_0377 | -2 | 19 | 1.580036 | hypothetical protein | |
| smi_0376 | -2 | 18 | 1.351118 | Helicase | |
| smi_0375 | 0 | 17 | -0.548702 | hypothetical protein | |
| smi_0374 | 1 | 18 | -1.771050 | hypothetical protein | |
| smi_0373 | 3 | 20 | -3.042552 | hypothetical protein | |
| smi_0372 | 6 | 23 | -4.542846 | hypothetical protein | |
| smi_0371 | 6 | 22 | -3.970513 | ribosome-binding factor A | |
| smi_0370 | 7 | 24 | -2.824793 | Translation initiation factor | |
| smi_0369 | 6 | 25 | -2.265484 | L7A family ribosomal protein | |
| smi_0368 | 6 | 26 | -0.958119 | nucleic-acid-binding protein implicated in | |
| smi_0367 | 4 | 27 | 0.405506 | transcription termination-antitermination | |
| smi_0366 | 3 | 26 | 1.102602 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0396 | HTHTETR | 44 | 7e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0391 | GPOSANCHOR | 32 | 0.010 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0389 | RTXTOXIND | 32 | 0.012 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0379 | TCRTETOQM | 86 | 3e-19 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 29 | smi_0340 | smi_0334 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0340 | 1 | 29 | 3.552810 | glutamine synthetase type 1 | |
| smi_0339 | 0 | 28 | 3.812151 | transcriptional repressor of the glutamine | |
| smi_0338 | 2 | 23 | 3.187106 | hypothetical protein | |
| smi_0337 | 0 | 24 | 3.806062 | phosphoglycerate kinase | |
| smi_0336 | 0 | 19 | 3.455939 | endo-beta-N-acetylglucosaminidase D | |
| smi_0335 | 1 | 19 | 3.317940 | Na/Pi cotransporter II-related protein | |
| smi_0334 | 1 | 17 | 3.125380 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0340 | BONTOXILYSIN | 26 | 0.015 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| 30 | smi_0318 | smi_0277 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0318 | -2 | 16 | 3.393856 | ABC transporter permease | |
| smi_0317 | -3 | 15 | 3.376018 | ABC transporter substrate-binding protein | |
| smi_0316 | -2 | 16 | 2.364678 | peptide ABC transporter ATP-binding protein | |
| smi_0315 | -3 | 14 | 2.544488 | peptide ABC transporter ATP-binding protein | |
| smi_0314 | -3 | 13 | 0.609622 | peptide ABC transporter permease | |
| smi_0313 | -4 | 13 | -1.014021 | peptide ABC transporter permease | |
| smi_0312 | -1 | 17 | -3.108028 | ABC transporter substrate-binding | |
| smi_0311 | -1 | 19 | -4.739360 | *CBS domain membrane protein | |
| smi_0310 | 0 | 24 | -5.957843 | DNA-entry nuclease (competence-specific | |
| smi_0309 | 1 | 25 | -6.153048 | hypothetical protein | |
| smi_0308 | 1 | 17 | -3.261889 | UDP-N-acetylglucosamine-1- | |
| smi_0307 | 0 | 14 | -1.845033 | hypothetical protein | |
| smi_0306 | -2 | 14 | 0.485488 | phosphopantetheine adenylyltransferase | |
| smi_0305 | -1 | 16 | 2.147974 | methyltransferase | |
| smi_0304 | -1 | 23 | 3.910465 | aspartate--ammonia ligase (asparagine synthetase | |
| smi_0303 | -2 | 23 | 4.121211 | hypothetical protein | |
| smi_0302 | -1 | 24 | 4.311557 | rRNA/tRNA methylase | |
| smi_0301 | -2 | 23 | 4.490175 | oxaA2 | |
| smi_0300 | -3 | 22 | 4.490668 | histidine kinase | |
| smi_0299 | -3 | 23 | 4.949926 | response regulator | |
| smi_0298 | -3 | 22 | 4.458582 | ABC transporter permease | |
| smi_0297 | -3 | 20 | 4.307540 | ABC transporter permease | |
| smi_0296 | -2 | 17 | 3.127220 | ABC transporter ATP-binding protein | |
| smi_0295 | -2 | 17 | 3.330232 | pyruvate-formate lyase activating enzyme | |
| smi_0294 | -2 | 16 | 2.764245 | diaminopimelate decarboxylase | |
| smi_0293 | -2 | 16 | 2.125524 | repressor of purine biosynthetic genes | |
| smi_0292 | -2 | 19 | 2.097889 | transposase, ISSmi1 | |
| smi_0291 | -3 | 14 | 1.569169 | cmp-binding factor 1 | |
| smi_0290 | -2 | 16 | 3.074476 | hypothetical protein | |
| smi_0289 | -2 | 15 | 2.494006 | thiamine pyrophosphokinase | |
| smi_0288 | -1 | 16 | 2.267728 | pentose-5-phosphate-3-epimerase | |
| smi_0287 | -2 | 17 | 2.859324 | hypothetical protein | |
| smi_0286 | -2 | 15 | 2.730890 | 16S rRNA | |
| smi_0285 | -2 | 16 | 3.393272 | hypothetical protein | |
| smi_0284 | -2 | 16 | 3.177984 | hypothetical protein | |
| smi_0283 | -2 | 20 | 2.788441 | amino acid permease | |
| smi_0282 | -1 | 16 | 2.815581 | substrate-binding lipoprotein, oligopeptide | |
| smi_0281 | -1 | 13 | 2.330480 | 50S ribosomal protein L34 | |
| smi_0280 | -2 | 13 | 2.757672 | aspartate aminotransferase | |
| smi_0279 | -1 | 17 | 2.129341 | hypothetical protein | |
| smi_0278 | 0 | 25 | 2.375316 | hypothetical protein | |
| smi_0277 | 0 | 35 | 3.184841 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0315 | LPSBIOSNTHSS | 150 | 2e-49 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0310 | 60KDINNERMP | 114 | 1e-30 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0308 | HTHFIS | 76 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0305 | PF05272 | 32 | 0.003 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0297 | FLGHOOKAP1 | 28 | 0.047 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 31 | smi_0268 | smi_0263 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0268 | -1 | 18 | 3.362565 | xanthine/uracil permease | |
| smi_0267 | 0 | 19 | 3.502603 | hypothetical protein | |
| smi_0266 | 1 | 20 | 3.319739 | alcohol dehydrogenase, propanol-preferring, | |
| smi_0265 | 1 | 20 | 3.456677 | phosphotransferase system, mannose-specific | |
| smi_0264 | 1 | 19 | 3.709522 | phosphotransferase system, mannose-specific, | |
| smi_0263 | 4 | 25 | 3.001735 | mannose-specific phosphotransferase system |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0263 | TCRTETOQM | 620 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 32 | smi_0236 | smi_0231 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0236 | 3 | 23 | 1.483579 | histidine kinase | |
| smi_0235 | 3 | 22 | 1.327547 | hypothetical protein | |
| smi_0234 | 3 | 25 | 0.567543 | ABC transporter ATP-binding protein | |
| smi_0233 | 5 | 35 | 0.620050 | hypothetical protein | |
| smi_0232 | 5 | 37 | 1.862735 | hypothetical protein | |
| smi_0231 | 3 | 30 | 1.520649 | **********transposase, ISSmi1 |
| 33 | smi_0195 | smi_0180 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0195 | 2 | 23 | -0.497862 | hypothetical protein | |
| smi_0194 | 1 | 20 | -1.543537 | alcohol dehydrogenase | |
| smi_0193 | -2 | 21 | -4.150947 | N-acetylglucosamine-6-phosphate deacetylase | |
| smi_0192 | 0 | 25 | -7.157900 | transposase, ISSmi1 | |
| smi_0191 | 3 | 31 | -7.685199 | hypothetical protein | |
| smi_0190 | 2 | 32 | -7.647648 | tRNA-guanine transglycosylase (guanine insertion | |
| smi_0189 | 1 | 30 | -7.090474 | hypothetical protein | |
| smi_0188 | 1 | 30 | -7.285077 | pyrrolidone-carboxylate peptidase | |
| smi_0187 | 1 | 28 | -7.343887 | hypothetical protein | |
| smi_0186 | 1 | 26 | -6.784016 | hypothetical protein | |
| smi_0185 | 1 | 27 | -7.563796 | multi antimicrobial extrusion (MATE) family | |
| smi_0184 | 1 | 28 | -7.721850 | threonine synthase | |
| smi_0183 | 2 | 29 | -8.153022 | hypothetical protein | |
| smi_0182 | 3 | 29 | -8.557292 | hypothetical protein | |
| smi_0181 | 2 | 30 | -7.612184 | hypothetical protein | |
| smi_0180 | -2 | 24 | -5.169730 | hypothetical protein |
| 34 | smi_0115 | smi_0100 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0115 | 2 | 18 | -1.012525 | ABC transporter ATP-binding protein | |
| smi_0114 | 2 | 19 | -1.133506 | ABC transporter ATP-binding protein | |
| smi_0113 | 2 | 24 | -3.246360 | hypothetical protein | |
| smi_0112 | 2 | 33 | -6.150295 | hypothetical protein | |
| smi_0111 | 1 | 26 | -4.112246 | transcriptional regulator | |
| smi_0110 | -1 | 23 | -3.645215 | hypothetical protein | |
| smi_0109 | 0 | 20 | -3.291068 | histidyl-tRNA synthetase | |
| smi_0108 | -1 | 19 | -3.627783 | hypothetical protein | |
| smi_0107.1 | -1 | 23 | -0.945162 | positive transcriptional regulator of | |
| smi_0107 | -2 | 17 | 0.302049 | hypothetical protein | |
| smi_0106 | 0 | 13 | -1.139842 | hypothetical protein | |
| smi_0105 | 0 | 13 | -1.435481 | dihydroxyacid dehydratase | |
| smi_0104 | 1 | 14 | -1.607318 | transketolase c-terminal section | |
| smi_0103 | 0 | 15 | -0.921592 | transketolase n-terminal section | |
| smi_0102 | 0 | 16 | -0.267541 | PTS system, IIC component | |
| smi_0101 | 2 | 18 | -2.821181 | PTS system, IIB component | |
| smi_0100 | 3 | 30 | -2.724533 | transcriptional regulator, BglG family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0101 | RTXTOXIND | 29 | 0.029 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 35 | smi_2088 | smi_2077 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_2088 | 1 | 25 | -7.741181 | serine protease | |
| smi_2087 | 1 | 28 | -6.878174 | 23S rRNA | |
| smi_2085 | 1 | 26 | -7.612612 | *competence stimulating peptide (CSP) precursor | |
| smi_2084 | 1 | 22 | -6.596533 | histidine kinase | |
| smi_2083 | 0 | 21 | -5.693325 | response regulator | |
| smi_2080 | -1 | 22 | -4.451299 | **hypothetical protein | |
| smi_2079 | -1 | 21 | -4.542491 | hypothetical protein | |
| smi_2078 | -1 | 19 | -4.425593 | hypothetical protein | |
| smi_2077 | -1 | 19 | -2.997563 | ABC-F family ATPase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2088 | V8PROTEASE | 62 | 1e-12 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2087 | 56KDTSANTIGN | 27 | 0.037 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2080 | HTHTETR | 49 | 1e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2079 | ICENUCLEATIN | 34 | 0.003 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_2077 | PF05272 | 32 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 36 | smi_1988 | smi_1978 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1988 | 2 | 19 | 1.788097 | hypothetical protein | |
| smi_1987 | -1 | 18 | 2.273785 | hypothetical protein | |
| smi_1986 | -1 | 19 | 2.996632 | hypothetical protein | |
| smi_1985 | -1 | 20 | 3.664141 | hypothetical protein | |
| smi_1984 | -1 | 20 | 3.560401 | transcriptional regulator | |
| smi_1983 | -1 | 15 | 3.030792 | cyanate permease | |
| smi_1982 | -2 | 17 | 2.279071 | glycosyl transferase | |
| smi_1981 | -1 | 19 | 2.022990 | nucleoside-diphosphate sugar isomerase | |
| smi_1980 | 0 | 20 | -1.078808 | phosphatase | |
| smi_1979 | 1 | 23 | -5.331153 | L-serine dehydratase, alpha subunit | |
| smi_1978 | 2 | 29 | -7.181608 | L-serine dehydratase, beta subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1988 | IGASERPTASE | 42 | 4e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1986 | TCRTETB | 28 | 0.025 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1984 | TCRTETA | 44 | 5e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1983 | BCTERIALGSPF | 38 | 5e-05 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1982 | NUCEPIMERASE | 81 | 9e-19 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1978 | PF03544 | 30 | 0.004 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 37 | smi_1540 | smi_1527 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1540 | 2 | 18 | 0.361601 | ATPase component of ABC transporter with | |
| smi_1539 | 2 | 16 | 0.261605 | cation efflux family protein | |
| smi_1538 | 2 | 16 | 0.277201 | yybP-ykoY element | |
| smi_1537 | 1 | 14 | -0.326347 | cation-transporting ATPase, E1-E2 family | |
| smi_1536 | 1 | 17 | 0.535620 | polypeptide deformylase | |
| smi_1535 | 1 | 19 | 0.694375 | hypothetical protein | |
| smi_1534 | 1 | 19 | 0.847732 | hypothetical protein | |
| smi_1533 | 2 | 23 | 1.316970 | hypothetical protein | |
| smi_1532 | 2 | 22 | 1.684477 | cell wall surface anchor family protein | |
| smi_1531 | 2 | 23 | 2.587496 | N-acetyl-beta-hexosaminidase | |
| smi_1530 | 0 | 14 | 2.525274 | transposase | |
| smi_1529 | -1 | 17 | 2.955842 | transposase, IS1167 | |
| smi_1528 | -1 | 18 | 3.666721 | beta-galactosidase | |
| smi_1527 | -1 | 19 | 3.887869 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1540 | FLGMRINGFLIF | 30 | 3e-04 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1538 | V8PROTEASE | 74 | 1e-15 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1537 | GPOSANCHOR | 39 | 4e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1534 | GPOSANCHOR | 50 | 1e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1532 | PF05043 | 292 | 1e-95 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1531 | TONBPROTEIN | 51 | 2e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1529 | TCRTETA | 34 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1527 | FLGPRINGFLGI | 29 | 0.027 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| 38 | smi_1503 | smi_1496 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1503 | -2 | 13 | 0.133613 | hypothetical protein | |
| smi_1502 | -2 | 12 | 0.862748 | cystathionine gamma-synthase | |
| smi_1501 | 0 | 11 | 0.670862 | MalY, bifunctional PLP-dependent enzyme | |
| smi_1500 | -2 | 11 | 0.539942 | abortive infection bacteriophage resistance | |
| smi_1499 | -1 | 11 | 0.333900 | hypothetical protein | |
| smi_1498 | 2 | 13 | 0.155235 | HepA, superfamily II DNA/RNA helicases, SNF2 | |
| smi_1497 | 1 | 18 | 1.772748 | hypothetical protein | |
| smi_1496 | -1 | 18 | 1.975310 | UDP-N-acetylmuramate-alanine ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1503 | BLACTAMASEA | 29 | 0.016 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1501 | SACTRNSFRASE | 35 | 3e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1500 | PHPHTRNFRASE | 28 | 0.025 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1499 | PF04647 | 30 | 0.015 | Accessory gene regulator B | |
>PF04647#Accessory gene regulator B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1496 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 39 | smi_1485 | smi_1478 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1485 | 0 | 11 | -0.135444 | NAD+ synthetase | |
| smi_1484 | 0 | 12 | -0.234315 | acetyltransferases, including N-acetylases of | |
| smi_1483 | 0 | 14 | -0.151128 | hypothetical protein | |
| smi_1482 | 0 | 13 | -0.109187 | cytochrome c biogenesis protein CcdA | |
| smi_1481 | -2 | 14 | 2.138330 | hypothetical protein | |
| smi_1480 | -2 | 15 | 2.213263 | peptide methionine sulfoxide reductase | |
| smi_1479 | -2 | 15 | 3.309143 | response regulator | |
| smi_1478 | -2 | 16 | 3.299106 | histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1485 | HTHFIS | 95 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1484 | PF06580 | 208 | 2e-64 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1482 | IGASERPTASE | 39 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1478 | PF03309 | 35 | 3e-04 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| 40 | smi_1362 | smi_1355 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_1362 | -2 | 9 | 1.449979 | platelet activating factor | |
| smi_1361 | -2 | 10 | 1.977891 | hypothetical protein | |
| smi_1359 | -1 | 12 | 2.846260 | hypothetical protein | |
| smi_1358 | -1 | 12 | 2.825177 | cI-like repressor, S. pneumoniae bacteriophage | |
| smi_1357 | -1 | 13 | 2.900305 | hypothetical protein | |
| smi_1356 | -3 | 15 | 2.732511 | transposase orfB, ISSmu1 | |
| smi_1355 | -3 | 15 | 1.999537 | transposase orfA, ISSmu1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1362 | MALTOSEBP | 28 | 0.048 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1359 | ARGREPRESSOR | 36 | 4e-05 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1358 | LCRVANTIGEN | 30 | 0.016 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1356 | TYPE3IMSPROT | 34 | 0.002 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_1355 | IGASERPTASE | 30 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 41 | smi_0980 | smi_0966 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0980 | 3 | 18 | 0.645930 | T-box leader | |
| smi_0979 | 3 | 18 | 0.838604 | transposase, ISSmi1 | |
| smi_0978 | -3 | 17 | 2.035185 | transposase, ISSmi1 | |
| smi_0977 | -2 | 19 | 2.097453 | phosphoenolpyruvate carboxylase | |
| smi_0976 | -1 | 19 | 2.283967 | cell division protein FtsW | |
| smi_0975 | 0 | 20 | 2.282753 | peptidylprolyl isomerase | |
| smi_0974 | 0 | 20 | 2.363103 | O-methyltransferase | |
| smi_0973 | -1 | 18 | 2.452202 | oligoendopeptidase F | |
| smi_0972 | -1 | 17 | 2.185182 | competence protein CoiA | |
| smi_0971 | 0 | 14 | 0.959929 | hypothetical protein | |
| smi_0970 | 0 | 13 | 0.786918 | tellurite resistance protein TehB | |
| smi_0969 | 2 | 14 | 1.072247 | tmRNA(SsrA)-binding protein | |
| smi_0968 | 1 | 15 | 1.950573 | exoribonuclease R | |
| smi_0967 | 1 | 16 | 1.950087 | membrane protein involved in protein export | |
| smi_0966 | 1 | 12 | 2.070993 | 50S ribosomal protein L33 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0980 | DPTHRIATOXIN | 30 | 0.019 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0979 | FLAGELLIN | 34 | 0.003 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0975 | SECGEXPORT | 30 | 3e-04 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0973 | TCRTETA | 108 | 2e-28 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0970 | TCRTETOQM | 36 | 1e-04 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0967 | FbpA_PF05833 | 685 | 0.0 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0966 | FLGFLGJ | 30 | 0.035 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| 42 | smi_0852 | smi_0845 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0852 | -1 | 11 | -1.543063 | DNA gyrase, B subunit | |
| smi_0851 | -1 | 13 | -1.349179 | phosphatase | |
| smi_0850 | 0 | 13 | -0.212237 | transposase, ISSmi1 | |
| smi_0849 | 3 | 24 | -2.713720 | 4-methyl-5(b-hydroxyethyl)-thiazole | |
| smi_0848 | 0 | 23 | -3.621852 | rod shape determining protein RodA | |
| smi_0847 | 0 | 12 | -0.066503 | ATP-dependent helicase DinG | |
| smi_0846 | 0 | 11 | 1.128540 | protease | |
| smi_0845 | -1 | 10 | 1.163135 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0852 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0851 | HTHFIS | 86 | 2e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0849 | UREASE | 25 | 0.043 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0845 | DHBDHDRGNASE | 92 | 2e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 43 | smi_0698 | smi_0688 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0698 | -1 | 14 | -2.631693 | hypothetical protein | |
| smi_0697 | -2 | 11 | -1.023950 | hypothetical protein | |
| smi_0696 | -1 | 10 | -0.742847 | cell wall-associated serine proteinase | |
| smi_0695 | 1 | 14 | 1.466468 | *ABC transporter permease | |
| smi_0694 | 2 | 15 | 1.162095 | hypothetical protein | |
| smi_0693 | 1 | 12 | 0.745138 | ABC transporter ATP-binding protein | |
| smi_0692 | 0 | 16 | 1.420734 | fructose-2,6-bisphosphatase | |
| smi_0691 | 0 | 12 | 1.346673 | hypothetical protein | |
| smi_0690 | 0 | 13 | 1.583141 | plasmid stabilization system toxin protein, | |
| smi_0688 | -2 | 14 | 2.477834 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0698 | TOXICSSTOXIN | 25 | 0.035 | Staphylococcal toxic shock syndrome toxin signature. | |
>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0694 | PF06580 | 31 | 0.009 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0693 | HTHFIS | 86 | 1e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0691 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0688 | ISCHRISMTASE | 51 | 4e-10 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 44 | smi_0637 | smi_0631 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0637 | 0 | 16 | -0.463957 | iron-dependent transcriptional regulator | |
| smi_0636 | -2 | 16 | 1.772436 | hypothetical protein | |
| smi_0635 | 0 | 16 | 1.929102 | D-tyrosyl-tRNA(Tyr) deacylase | |
| smi_0634 | -2 | 12 | 1.923938 | GTP pyrophosphokinase, stringent response | |
| smi_0633 | -1 | 14 | 2.378034 | hypothetical protein | |
| smi_0632 | -2 | 10 | 2.145923 | metallo-beta-lactamase superfamily protein | |
| smi_0631 | -3 | 14 | 1.795543 | peptidase M13 superfamily |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0637 | TCRTETA | 38 | 5e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0634 | ADHESNFAMILY | 442 | e-160 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0632 | RTXTOXIND | 48 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0631 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 45 | smi_0263 | smi_0256 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0263 | 4 | 25 | 3.001735 | mannose-specific phosphotransferase system | |
| smi_0262 | -1 | 18 | 2.692360 | hypothetical protein | |
| smi_0261 | -2 | 20 | 2.388817 | hypothetical protein | |
| smi_0260 | -1 | 24 | 2.292489 | transposase, ISSmi5 | |
| smi_0259 | -1 | 18 | 0.855891 | aminopeptidase C | |
| smi_0258 | 0 | 23 | 1.886437 | 16S rRNA pseudouridine(516) synthase | |
| smi_0257 | 0 | 25 | 1.463561 | aminopeptidase | |
| smi_0256 | -1 | 19 | 0.388995 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0263 | TCRTETOQM | 620 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0259 | HTHFIS | 73 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0258 | PF06580 | 40 | 9e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0256 | PF05272 | 29 | 0.025 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 46 | smi_0073 | smi_0064 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0073 | 0 | 22 | 5.963823 | PTS system, IID component | |
| smi_0072 | 1 | 21 | 5.343425 | PTS system, IIC component | |
| smi_0071 | 0 | 19 | 4.075012 | phosphotransferase system sugar-specific EIIB | |
| smi_0070 | -1 | 19 | 4.300556 | beta-galactosidase 3 | |
| smi_0069 | -2 | 21 | 4.028032 | hypothetical protein | |
| smi_0068 | -3 | 20 | 3.438264 | transposase, IS1167 | |
| smi_0067 | -3 | 19 | 2.679636 | adenylosuccinate lyase | |
| smi_0066 | -1 | 25 | 0.940058 | 5-(carboxyamino)imidazole ribonucleotide | |
| smi_0065 | 0 | 26 | 1.271134 | 5-(carboxyamino)imidazole ribonucleotide mutase | |
| smi_0064 | 2 | 27 | 0.033474 | phosphoribosylglycinamide synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0073 | ARGDEIMINASE | 30 | 0.023 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0069 | BINARYTOXINA | 30 | 0.012 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0067 | FLGMRINGFLIF | 32 | 0.014 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0066 | RTXTOXINA | 30 | 0.011 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0065 | RTXTOXIND | 67 | 3e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0064 | ANTHRAXTOXNA | 30 | 0.042 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 47 | smi_0038 | smi_0031 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| smi_0038 | 3 | 19 | 0.488298 | hypothetical protein | |
| smi_0037 | 0 | 12 | 0.768431 | transposase, ISSpnII | |
| smi_0036 | -2 | 16 | 2.170512 | transposase, ISSpnII | |
| smi_0034 | -2 | 15 | 2.033314 | hypothetical protein | |
| smi_0033 | -2 | 19 | 2.913574 | hypothetical protein | |
| smi_0032 | -2 | 20 | 2.455321 | transposase, ISSmi1 | |
| smi_0031 | -2 | 20 | 1.983152 | transposase, ISSmi4 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0038 | PF01540 | 39 | 4e-05 | Adhesin lipoprotein | |
>PF01540#Adhesin lipoprotein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0037 | CHANLCOLICIN | 29 | 0.038 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0036 | FLGFLIH | 31 | 4e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0034 | FLGFLIH | 40 | 5e-06 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| smi_0031 | FLGMOTORFLIM | 28 | 0.034 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||