| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | BBta_0082 | BBta_0103 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0082 | 0 | 15 | 3.278329 | 2-octaprenylphenol hydroxylase | |
| BBta_0083 | 0 | 14 | 3.192181 | bifunctional | |
| BBta_0084 | 1 | 14 | 3.562818 | deoxyuridine 5'-triphosphate | |
| BBta_0085 | 0 | 12 | 3.449551 | sensor histidine kinase | |
| BBta_0086 | 1 | 13 | 3.459791 | hypothetical protein | |
| BBta_0087 | 0 | 12 | 3.224246 | hypothetical protein | |
| BBta_0088 | 0 | 11 | 3.203437 | nucleotidyl transferase family protein | |
| BBta_0089 | 1 | 10 | 3.027492 | DNA helicase/exodeoxyribonuclease V subunit B | |
| BBta_0090 | -1 | 9 | 1.905311 | DNA helicase/exodeoxyribonuclease V subunit A | |
| BBta_0091 | 0 | 11 | 1.145325 | thioredoxin 1, redox factor | |
| BBta_0092 | -1 | 11 | 1.033402 | ATP-dependent DNA ligase | |
| BBta_0093 | 1 | 11 | 1.042726 | hypothetical protein | |
| BBta_0094 | -1 | 12 | 0.960754 | bifunctional folylpolyglutamate | |
| BBta_0095 | -1 | 13 | 0.683471 | acetyl-CoA carboxylase subunit beta | |
| BBta_0096 | 0 | 11 | 0.665365 | tryptophan synthase subunit alpha | |
| BBta_0097 | 2 | 14 | -0.843005 | tryptophan synthase subunit beta | |
| BBta_0098 | 4 | 13 | -0.390275 | N-(5'-phosphoribosyl)anthranilate isomerase | |
| BBta_0099 | 2 | 14 | 0.569000 | hypothetical protein | |
| BBta_0101 | 3 | 14 | 0.440337 | integration host factor subunit beta | |
| BBta_0102 | 3 | 15 | 0.188045 | S49 family peptidase | |
| BBta_0103 | 2 | 14 | 0.144375 | 30S ribosomal protein S1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0082 | YERSSTKINASE | 32 | 0.005 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0083 | TONBPROTEIN | 30 | 0.016 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0085 | DNABINDINGHU | 28 | 0.035 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0087 | TACYTOLYSIN | 26 | 0.019 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0101 | DNABINDINGHU | 110 | 2e-35 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0103 | SHIGARICIN | 31 | 0.015 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| 2 | BBta_0141 | BBta_0147 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0141 | 2 | 12 | -1.320102 | phosphoribosyl-ATP pyrophosphatase | |
| BBta_0142 | 2 | 14 | -0.958572 | imidazole glycerol phosphate synthase subunit | |
| BBta_0143 | 2 | 14 | -1.789829 | hypothetical protein | |
| BBta_0144 | 2 | 13 | -0.311662 | hypothetical protein | |
| BBta_0145 | 2 | 12 | 0.184179 | 1-(5-phosphoribosyl)-5-[(5- | |
| BBta_0146 | 2 | 13 | -0.500660 | imidazole glycerol phosphate synthase subunit | |
| BBta_0147 | 2 | 10 | -0.479132 | hypothetical protein |
| 3 | BBta_0275 | BBta_0291 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0275 | 2 | 12 | 2.704174 | hypothetical protein | |
| BBta_0276 | 0 | 13 | 2.519992 | cytochrome P450 hydroxylase | |
| BBta_0277 | 1 | 11 | 2.598262 | hypothetical protein | |
| BBta_0278 | 1 | 14 | 2.179679 | major facilitator superfamily permease | |
| BBta_0279 | 1 | 12 | -0.680261 | hypothetical protein | |
| BBta_0280 | -2 | 13 | 1.710441 | hypothetical protein | |
| BBta_0282 | -2 | 12 | 3.302089 | polysaccharide deacetylase domain-containing | |
| BBta_0283 | -1 | 10 | 3.862610 | hypothetical protein | |
| BBta_0284 | 0 | 10 | 3.673838 | hypothetical protein | |
| BBta_0285 | 1 | 10 | 4.454754 | hypothetical protein | |
| BBta_0286 | 1 | 12 | 5.661925 | *HemY domain-containing protein | |
| BBta_0287 | 0 | 10 | 4.329655 | hypothetical protein | |
| BBta_0288 | 0 | 12 | 2.698065 | uroporphyrinogen-III synthase | |
| BBta_0289 | -1 | 14 | 2.448709 | DNA-binding/iron metalloprotein/AP endonuclease | |
| BBta_0290 | -1 | 17 | 2.018737 | NAD(P)H-dependent glycerol-3-phosphate | |
| BBta_0291 | 2 | 18 | 0.397307 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0278 | TCRTETA | 58 | 5e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0283 | PF05616 | 33 | 3e-04 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0286 | IGASERPTASE | 43 | 4e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 4 | BBta_0425 | BBta_0477 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0425 | 2 | 16 | -0.121603 | hypothetical protein | |
| BBta_0426 | 3 | 14 | -0.765493 | 50S ribosomal protein L27 | |
| BBta_0427 | 2 | 14 | -1.032977 | 50S ribosomal protein L21 | |
| BBta_0428 | 2 | 14 | -1.392040 | hypothetical protein | |
| BBta_0429 | 3 | 17 | -1.377802 | 31 kDa outer-membrane immunogenic protein | |
| BBta_0430 | 1 | 15 | 0.262675 | *resolvase | |
| BBta_0431 | 2 | 14 | 1.140399 | hypothetical protein | |
| BBta_0432 | 1 | 15 | 1.189391 | hypothetical protein | |
| BBta_0433 | 1 | 15 | 1.720529 | hypothetical protein | |
| BBta_0434 | 2 | 15 | 1.702995 | prophage CP4-57 regulatory protein | |
| BBta_0435 | 1 | 13 | 0.947808 | conjugal transfer relaxase TraA | |
| BBta_0436 | 2 | 21 | -3.129215 | conjugual transfert protein, traC | |
| BBta_0437 | 3 | 21 | -2.470387 | conjugal transfer protein traD | |
| BBta_0438 | 4 | 21 | -2.665539 | transposase | |
| BBta_0439 | 4 | 30 | -5.154687 | transposase | |
| BBta_0440 | 3 | 29 | -4.968951 | transposase | |
| BBta_0441 | 2 | 29 | -5.361658 | transposase | |
| BBta_0442 | 1 | 27 | -3.809375 | transposase | |
| BBta_0443 | 1 | 28 | -4.498546 | transposase | |
| BBta_0444 | 0 | 27 | -3.995996 | HTH-type transcriptional regulator cbbR | |
| BBta_0445 | 0 | 24 | -3.605234 | D-fructose 1,6-bisphosphatase | |
| BBta_0446 | 0 | 21 | -3.521099 | phosphoribulokinase | |
| BBta_0447 | 0 | 19 | -2.965713 | transketolase | |
| BBta_0448 | 1 | 19 | -4.009511 | glyceraldehyde-3-phosphate dehydrogenase | |
| BBta_0449 | 1 | 21 | -3.913027 | phosphoglycerate kinase | |
| BBta_0450 | 2 | 19 | -3.714705 | fructose-1,6-bisphosphate aldolase | |
| BBta_0451 | 3 | 20 | -2.760281 | ribulose bisophosphate carboxylase | |
| BBta_0452 | 3 | 21 | -2.493438 | ribulose 1,5-bisphosphate carboxylase small | |
| BBta_0453 | 3 | 23 | -3.311721 | CbbX-like protein | |
| BBta_0454 | 4 | 25 | -3.492028 | ribulose-5-phosphate 3-epimerase | |
| BBta_0455 | 4 | 24 | -3.921757 | fructose-bisphosphate aldolase | |
| BBta_0456 | 4 | 26 | -4.884476 | phosphoglycolate phosphatase | |
| BBta_0457 | 4 | 27 | -5.280375 | haloacid dehalogenase | |
| BBta_0458 | 4 | 28 | -5.481646 | two-component response regulator protein | |
| BBta_0460 | 5 | 27 | -5.009294 | uptake hydrogenase accessory protein hupU | |
| BBta_0461 | 1 | 29 | -4.932663 | uptake hydrogenase large subunit | |
| BBta_0462 | 3 | 32 | -4.390985 | hypothetical protein | |
| BBta_0463 | 5 | 33 | -4.300651 | hypothetical protein | |
| BBta_0464 | 3 | 29 | -4.100498 | hydrogenase maturation protease HyaD | |
| BBta_0465 | 0 | 25 | -2.984691 | hypothetical protein | |
| BBta_0466 | 0 | 24 | -2.433528 | hypothetical protein | |
| BBta_0467 | 0 | 23 | -1.961674 | hypothetical protein | |
| BBta_0468 | -1 | 22 | -2.216539 | hypothetical protein | |
| BBta_0469 | -1 | 21 | -2.715417 | nitrogen-fixing protein NifU | |
| BBta_0470 | -1 | 20 | -2.292107 | hypothetical protein | |
| BBta_0471 | -1 | 21 | -2.738711 | carbamoyl phosphate phosphatase, (NiFe) | |
| BBta_0472 | -1 | 23 | -3.867897 | hydrogenase expression/formation protein HypC | |
| BBta_0473 | -1 | 20 | -3.583901 | phosphoheptose isomerase | |
| BBta_0474 | -1 | 19 | -3.552638 | hydrogenase expression/formation | |
| BBta_0475 | 0 | 21 | -1.814153 | hydrogenase maturation | |
| BBta_0476 | 1 | 23 | -2.591812 | hydrogenase formation/expression | |
| BBta_0477 | 3 | 23 | -2.516902 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0429 | OMPADOMAIN | 48 | 1e-08 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0438 | DPTHRIATOXIN | 27 | 0.015 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0447 | TCRTETB | 31 | 0.022 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0458 | HTHFIS | 379 | e-130 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 5 | BBta_0516 | BBta_0525 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0516 | 2 | 13 | -2.481752 | multi-sensor hybrid histidine kinase | |
| BBta_0517 | 4 | 16 | -2.615255 | response regulator receiver | |
| BBta_0518 | 2 | 12 | -0.821180 | response regulator receiver | |
| BBta_0519 | 3 | 12 | -0.287308 | CRP/FNR family transcriptional regulator | |
| BBta_0521 | 3 | 13 | -0.267598 | hypothetical protein | |
| BBta_0522 | 3 | 15 | -0.794399 | hypothetical protein | |
| BBta_0523 | 1 | 11 | -1.088198 | flagellar biosynthesis repressor FlbT | |
| BBta_0524 | 1 | 10 | -1.021528 | chemotaxis protein CheA | |
| BBta_0525 | 1 | 16 | -3.485866 | CheW protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0516 | HTHFIS | 79 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0517 | HTHFIS | 63 | 8e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0518 | HTHFIS | 83 | 1e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0522 | FLAGELLIN | 57 | 7e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0524 | HTHFIS | 88 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 6 | BBta_0579 | BBta_0612 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0579 | 6 | 30 | -3.370577 | hypothetical protein | |
| BBta_0580 | 7 | 35 | -4.543490 | *phage integrase | |
| BBta_0581 | 8 | 41 | -5.456822 | hypothetical protein | |
| BBta_0583 | 9 | 51 | -7.329166 | hypothetical protein | |
| BBta_0584 | 10 | 57 | -8.272735 | hypothetical protein | |
| BBta_0586 | 10 | 58 | -8.552638 | hypothetical protein | |
| BBta_0587 | 10 | 58 | -8.417076 | hypothetical protein | |
| BBta_0588 | 9 | 58 | -8.118130 | hypothetical protein | |
| BBta_0589 | 9 | 56 | -7.639863 | hypothetical protein | |
| BBta_0592 | 6 | 45 | -6.742879 | hypothetical protein | |
| BBta_0593 | 6 | 30 | -6.298116 | hypothetical protein | |
| BBta_0595 | 6 | 28 | -5.830248 | transposase | |
| BBta_0596 | 6 | 30 | -6.242837 | hypothetical protein | |
| BBta_0597 | 4 | 31 | -5.555632 | helicase | |
| BBta_0598 | 5 | 34 | -5.993236 | hypothetical protein | |
| BBta_0599 | 5 | 33 | -6.235376 | arylsulfatase | |
| BBta_0600 | 4 | 37 | -5.782118 | hypothetical protein | |
| BBta_0601 | 4 | 37 | -5.731354 | hypothetical protein | |
| BBta_0602 | 3 | 35 | -5.371764 | hypothetical protein | |
| BBta_0603 | 5 | 33 | -5.273198 | hypothetical protein | |
| BBta_0604 | 5 | 31 | -4.920672 | hypothetical protein | |
| BBta_0606 | 2 | 31 | -2.722699 | hypothetical protein | |
| BBta_0607 | 2 | 31 | -3.780837 | hypothetical protein | |
| BBta_0608 | 2 | 29 | -3.616520 | hypothetical protein | |
| BBta_0609 | 2 | 27 | -3.364283 | transposase | |
| BBta_0610 | -1 | 29 | -3.787241 | hypothetical protein | |
| BBta_0611 | -1 | 25 | -3.788088 | transposase | |
| BBta_0612 | 0 | 26 | -3.484929 | acyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0589 | VACCYTOTOXIN | 42 | 2e-05 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0602 | SYCDCHAPRONE | 38 | 5e-05 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0612 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 7 | BBta_0670 | BBta_0685 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0670 | 2 | 15 | 2.174672 | glutathione S-transferase | |
| BBta_0671 | 2 | 13 | 2.247718 | AraC family transcriptional regulator | |
| BBta_0672 | 2 | 12 | 2.283139 | cation-transporting ATPase | |
| BBta_0673 | 2 | 11 | 0.919093 | hypothetical protein | |
| BBta_0674 | 1 | 11 | 0.913944 | fatty-acid--CoA ligase | |
| BBta_0675 | 3 | 10 | 1.622707 | carboxylase | |
| BBta_0676 | 2 | 10 | 1.100836 | biotin carboxylase | |
| BBta_0677 | -1 | 10 | 0.238645 | two component-response regulator receiver | |
| BBta_0678 | -1 | 11 | 0.341083 | two-component sensor histidine kinase | |
| BBta_0679 | 0 | 11 | 0.805131 | cytochrome C | |
| BBta_0680 | 0 | 11 | 1.917259 | hypothetical protein | |
| BBta_0681 | 1 | 11 | 1.855628 | acyl-CoA synthetase | |
| BBta_0682 | 1 | 10 | 1.978263 | branched chain amino acid binding protein | |
| BBta_0683 | 1 | 12 | 2.496337 | MAPEG family protein | |
| BBta_0684 | 2 | 11 | 2.483770 | hypothetical protein | |
| BBta_0685 | 2 | 10 | 2.265814 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0674 | OMPADOMAIN | 30 | 0.028 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0676 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0678 | PF06580 | 31 | 0.012 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 8 | BBta_0972 | BBta_0996 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0972 | 0 | 12 | 3.424458 | acyl-CoA synthetase | |
| BBta_0973 | -1 | 12 | 4.667755 | hypothetical protein | |
| BBta_0974 | -1 | 13 | 3.038734 | hypothetical protein | |
| BBta_0975 | 0 | 13 | 3.063561 | hypothetical protein | |
| BBta_0976 | -1 | 14 | 2.994955 | hypothetical protein | |
| BBta_0977 | -2 | 14 | 2.710526 | hypothetical protein | |
| BBta_0978 | 0 | 11 | 1.913429 | hypothetical protein | |
| BBta_0979 | 1 | 13 | 1.143931 | NAD synthetase | |
| BBta_0980 | 3 | 14 | 0.640152 | extracellular metal-binding protein | |
| BBta_0981 | 2 | 18 | -0.392752 | hypothetical protein | |
| BBta_0982 | 2 | 19 | -0.297418 | hypothetical protein | |
| BBta_0983 | 1 | 18 | -1.293640 | major facilitator superfamily permease | |
| BBta_0984 | 1 | 22 | -1.120139 | hypothetical protein | |
| BBta_0985 | 0 | 23 | -0.700231 | hypothetical protein | |
| BBta_0986 | -1 | 19 | -0.455634 | hypothetical protein | |
| BBta_0987 | -1 | 19 | -0.309170 | hypothetical protein | |
| BBta_0988 | -1 | 15 | -0.397929 | hypothetical protein | |
| BBta_0989 | 1 | 16 | -2.290990 | hypothetical protein | |
| BBta_0990 | 1 | 17 | -3.401639 | hypothetical protein | |
| BBta_0991 | 1 | 22 | -4.736674 | hypothetical protein | |
| BBta_0992 | 3 | 27 | -5.658603 | hypothetical protein | |
| BBta_0993 | 2 | 26 | -5.809425 | hypothetical protein | |
| BBta_0994 | 2 | 27 | -6.184902 | hypothetical protein | |
| BBta_0995 | 0 | 25 | -4.917419 | hypothetical protein | |
| BBta_0996 | 0 | 21 | -4.051403 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0973 | IGASERPTASE | 39 | 1e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0983 | TCRTETA | 52 | 2e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0989 | PRTACTNFAMLY | 28 | 0.039 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 9 | BBta_1010 | BBta_1026 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1010 | 0 | 13 | -3.068444 | WecB/TagA/CpsF glycosyl transferase | |
| BBta_1011 | 0 | 13 | -3.466235 | hypothetical protein | |
| BBta_1012 | 0 | 14 | -4.194608 | hypothetical protein | |
| BBta_1013 | 0 | 14 | -4.528029 | hypothetical protein | |
| BBta_1014 | 1 | 15 | -4.581863 | hypothetical protein | |
| BBta_1015 | 2 | 15 | -3.771150 | hypothetical protein | |
| BBta_1016 | 2 | 14 | -3.039389 | hypothetical protein | |
| BBta_1017 | 0 | 13 | -2.320169 | hypothetical protein | |
| BBta_1018 | 1 | 15 | -1.814539 | hypothetical protein | |
| BBta_1019 | 1 | 16 | -2.493310 | hypothetical protein | |
| BBta_1020 | 0 | 16 | -2.239611 | hypothetical protein | |
| BBta_1021 | 0 | 17 | -2.235055 | hypothetical protein | |
| BBta_1022 | 1 | 17 | -1.897587 | hypothetical protein | |
| BBta_1023 | 1 | 16 | -1.890236 | hypothetical protein | |
| BBta_1025 | 2 | 15 | -2.318846 | hypothetical protein | |
| BBta_1026 | 2 | 14 | -1.481263 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1014 | PF06057 | 28 | 0.041 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1015 | CHANLCOLICIN | 33 | 0.002 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1017 | V8PROTEASE | 30 | 0.008 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 10 | BBta_1036 | BBta_1068 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1036 | 0 | 17 | -3.217778 | serine/threonine protein phosphatase | |
| BBta_1037 | 0 | 18 | -3.142062 | glycosyltransferase group 1 family protein | |
| BBta_1038 | 1 | 20 | -3.422022 | hypothetical protein | |
| BBta_1039 | 0 | 18 | -2.862460 | hypothetical protein | |
| BBta_1040 | 0 | 16 | -2.338206 | hypothetical protein | |
| BBta_1041 | -1 | 15 | -2.567733 | hypothetical protein | |
| BBta_1042 | -1 | 14 | -2.373441 | group 1 glycosyl transferase | |
| BBta_1043 | -2 | 14 | -2.455120 | hypothetical protein | |
| BBta_1044 | -3 | 12 | -2.708000 | hypothetical protein | |
| BBta_1045 | -1 | 14 | -3.513792 | glutamate-1-semialdehyde 2,1-aminomutase | |
| BBta_1046 | -2 | 14 | -4.105457 | sugar nucleotide epimerase/dehydratase | |
| BBta_1048 | -1 | 15 | -4.230035 | SAM-dependent methyltransferase | |
| BBta_1049 | -2 | 18 | -4.034791 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| BBta_1050 | -2 | 18 | -4.326635 | hypothetical protein | |
| BBta_1051 | -2 | 17 | -4.027042 | acyltransferase membrane protein | |
| BBta_1052 | -2 | 17 | -3.941883 | glucose-1-phosphate cytidylyltransferase | |
| BBta_1054 | -2 | 19 | -3.520456 | hypothetical protein | |
| BBta_1055 | -1 | 20 | -3.245737 | hypothetical protein | |
| BBta_1056 | -2 | 19 | -2.414965 | hypothetical protein | |
| BBta_1057 | -2 | 19 | -1.799320 | hypothetical protein | |
| BBta_1059 | 0 | 22 | -2.005084 | hypothetical protein | |
| BBta_1060 | 0 | 22 | -2.202964 | group 1 glycosyl transferase | |
| BBta_1061 | 2 | 22 | -2.417519 | hypothetical protein | |
| BBta_1062 | 5 | 23 | -2.459483 | hypothetical protein | |
| BBta_1063 | 2 | 25 | -5.022840 | hypothetical protein | |
| BBta_1064 | 2 | 27 | -5.197036 | hypothetical protein | |
| BBta_1065 | 1 | 26 | -5.015774 | hypothetical protein | |
| BBta_1066 | 0 | 24 | -4.730222 | hypothetical protein | |
| BBta_1067 | 0 | 22 | -3.511771 | hypothetical protein | |
| BBta_1068 | 0 | 19 | -3.083217 | glycosyl transferase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1046 | NUCEPIMERASE | 85 | 7e-21 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 11 | BBta_1148 | BBta_1167 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1148 | 1 | 16 | 3.690655 | hypothetical protein | |
| BBta_1149 | 0 | 16 | 4.839664 | hypothetical protein | |
| BBta_1150 | 1 | 17 | 4.482723 | hypothetical protein | |
| BBta_1151 | -1 | 14 | 3.120298 | N-acetyl-gamma-glutamyl-phosphate reductase | |
| BBta_1152 | 2 | 24 | -3.169851 | short-chain dehydrogenase | |
| BBta_1153 | 5 | 38 | -7.315764 | NADPH quinone oxidoreductase | |
| BBta_1154 | 6 | 45 | -9.431541 | LysR family transcriptional regulator | |
| BBta_1155 | 5 | 33 | -6.861869 | diaminopimelate decarboxylase | |
| BBta_1156 | 5 | 31 | -6.359355 | T/G mismatch-specific endonuclease | |
| BBta_1157 | 4 | 22 | -4.864252 | hypothetical protein | |
| BBta_1158 | 2 | 14 | -2.852424 | hypothetical protein | |
| BBta_1159 | -1 | 8 | 0.760683 | 5-methylcytosine methyltransferase | |
| BBta_1161 | -2 | 14 | 2.718634 | hypothetical protein | |
| BBta_1162 | -2 | 13 | 1.590393 | RpiR family transcriptional regulator | |
| BBta_1163 | -2 | 13 | 1.317476 | non-hemolytic phospholipase C | |
| BBta_1164 | 3 | 12 | 1.804278 | phosphodiesterase (yfcE) | |
| BBta_1165 | 0 | 12 | 1.124434 | transcription elongation factor regulatory | |
| BBta_1166 | 1 | 12 | 1.765346 | IclR family transcriptional regulator | |
| BBta_1167 | 2 | 13 | 0.982222 | dihydrodipicolinate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1152 | DHBDHDRGNASE | 77 | 5e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1161 | PF07675 | 35 | 0.002 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1166 | PF05616 | 29 | 0.031 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| 12 | BBta_1210 | BBta_1244 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1210 | 3 | 22 | -4.480987 | 3-oxoacyl-ACP reductase | |
| BBta_1211 | 4 | 27 | -5.873270 | hypothetical protein | |
| BBta_1212 | 4 | 30 | -6.843264 | 3-oxoacyl-ACP reductase | |
| BBta_1213 | 5 | 34 | -7.675208 | alcohol dehydrogenase | |
| BBta_1214 | 6 | 42 | -9.528903 | NAD-dependent aldehyde dehydrogenase | |
| BBta_1215 | 8 | 55 | -11.907675 | *hypothetical protein | |
| BBta_1217 | 7 | 39 | -9.099173 | dienelactone hydrolase domain-containing | |
| BBta_1218 | 3 | 35 | -5.983960 | hypothetical protein | |
| BBta_1219 | 2 | 28 | -3.990069 | HTH-type transcriptional regulator | |
| BBta_1220 | 2 | 26 | -2.901199 | hypothetical protein | |
| BBta_1221 | 4 | 26 | -2.487115 | hypothetical protein | |
| BBta_1222 | 4 | 31 | -3.923925 | hypothetical protein | |
| BBta_1223 | 6 | 34 | -4.197636 | IS66 family transposase | |
| BBta_1224 | 6 | 39 | -5.630765 | transposase | |
| BBta_1225 | 7 | 44 | -7.390002 | IS3/IS911 family transposase | |
| BBta_1226 | 8 | 48 | -9.238262 | hypothetical protein | |
| BBta_1227 | 7 | 52 | -9.495495 | hypothetical protein | |
| BBta_1228 | 9 | 57 | -10.363207 | hypothetical protein | |
| BBta_1229 | 9 | 58 | -11.019842 | hypothetical protein | |
| BBta_1230 | 9 | 54 | -10.803046 | hypothetical protein | |
| BBta_1231 | 7 | 48 | -9.440051 | hypothetical protein | |
| BBta_1232 | 6 | 48 | -9.274454 | hypothetical protein | |
| BBta_1233 | 6 | 36 | -8.442100 | hypothetical protein | |
| BBta_1234 | 5 | 33 | -8.309879 | hypothetical protein | |
| BBta_1235 | 6 | 35 | -8.750443 | transposase | |
| BBta_1236 | 6 | 37 | -8.028651 | insertion element protein | |
| BBta_1237 | 6 | 38 | -8.091067 | hypothetical protein | |
| BBta_1238 | 7 | 38 | -8.103783 | hypothetical protein | |
| BBta_1239 | 9 | 46 | -8.813354 | hypothetical protein | |
| BBta_1240 | 9 | 45 | -8.510775 | hypothetical protein | |
| BBta_1241 | 8 | 46 | -8.291933 | hypothetical protein | |
| BBta_1242 | 9 | 48 | -9.029335 | hypothetical protein | |
| BBta_1243 | 7 | 40 | -7.565963 | hypothetical protein | |
| BBta_1244 | 5 | 31 | -5.504774 | phage / plasmid primase P4 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1210 | DHBDHDRGNASE | 79 | 2e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1212 | DHBDHDRGNASE | 111 | 8e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1220 | PF07675 | 27 | 0.021 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1238 | HTHFIS | 32 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1240 | IGASERPTASE | 33 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 13 | BBta_1389 | BBta_1419 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1389 | -1 | 18 | -3.005162 | inositol monophosphatase family protein | |
| BBta_1390 | -1 | 23 | -3.231602 | N-formylglutamate amidohydrolase | |
| BBta_1391 | 1 | 30 | -4.133443 | response regulator receiver | |
| BBta_1392 | 1 | 35 | -4.333355 | *phage related integrase | |
| BBta_1394 | 2 | 34 | -2.339217 | recombinase | |
| BBta_1395 | 3 | 33 | -2.528192 | hypothetical protein | |
| BBta_1396 | 4 | 33 | -2.994973 | hypothetical protein | |
| BBta_1397 | 4 | 31 | -3.597334 | hypothetical protein | |
| BBta_1398 | 4 | 30 | -3.917462 | hypothetical protein | |
| BBta_1399 | 4 | 28 | -5.796380 | hypothetical protein | |
| BBta_1400 | 2 | 29 | -6.550388 | hypothetical protein | |
| BBta_1401 | 4 | 29 | -6.765194 | hypothetical protein | |
| BBta_1402 | 3 | 26 | -6.181287 | transposase | |
| BBta_1403 | 4 | 31 | -7.101619 | hypothetical protein | |
| BBta_1404 | 4 | 29 | -6.610580 | hypothetical protein | |
| BBta_1405 | 3 | 24 | -4.140812 | thioredoxin-like protein | |
| BBta_1406 | 4 | 22 | -3.911306 | hypothetical protein | |
| BBta_1408 | 2 | 23 | -3.126104 | hypothetical protein | |
| BBta_1409 | 1 | 24 | -2.854953 | hypothetical protein | |
| BBta_1411 | 0 | 21 | -2.281602 | acetoacetate decarboxylase | |
| BBta_1412 | 0 | 21 | -2.049586 | patatin-like phospholipase | |
| BBta_1413 | 2 | 29 | -2.855786 | hypothetical protein | |
| BBta_1414 | 2 | 31 | -3.098995 | hypothetical protein | |
| BBta_1415 | 6 | 32 | -4.787810 | hypothetical protein | |
| BBta_1416 | 3 | 26 | -3.728396 | hypothetical protein | |
| BBta_1417 | 3 | 24 | -2.398841 | hypothetical protein | |
| BBta_1419 | 2 | 25 | -1.932470 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1391 | HTHFIS | 79 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 14 | BBta_1430 | BBta_1466 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1430 | 2 | 22 | -2.380884 | hypothetical protein | |
| BBta_1432 | 2 | 21 | -2.095067 | hypothetical protein | |
| BBta_1433 | 0 | 19 | -1.644257 | membrane-bound ATP synthase, F1 sector subunit | |
| BBta_1434 | 0 | 25 | -1.957204 | ATP synthase subunit b | |
| BBta_1435 | 0 | 27 | -3.336646 | F0F1 ATP synthase subunit C | |
| BBta_1436 | 0 | 27 | -3.340599 | ATP synthase A chain (ATPase protein 6) | |
| BBta_1438 | 0 | 25 | -3.275743 | H(+)-transporting ATP synthase, gene 1 | |
| BBta_1439 | 1 | 24 | -3.243681 | F0F1 ATP synthase subunit epsilon | |
| BBta_1440 | 1 | 22 | -2.894758 | F0F1 ATP synthase subunit beta | |
| BBta_1442 | 1 | 17 | -3.576004 | DNA polymerase IV | |
| BBta_1443 | 2 | 18 | -3.042134 | hypothetical protein | |
| BBta_1444 | 3 | 21 | -4.714497 | hypothetical protein | |
| BBta_1446 | 3 | 24 | -5.120953 | hypothetical protein | |
| BBta_1447 | 2 | 24 | -5.478786 | hypothetical protein | |
| BBta_1448 | 4 | 26 | -5.960003 | membrane transport protein | |
| BBta_1449 | 4 | 24 | -5.656482 | hypothetical protein | |
| BBta_1451 | 3 | 23 | -5.720228 | P-type ATPase, Mg2+ ATPase transport protein | |
| BBta_1452 | 2 | 21 | -4.709413 | hypothetical protein | |
| BBta_1453 | 2 | 18 | -4.408964 | NreA protein | |
| BBta_1454 | 2 | 18 | -4.323333 | hypothetical protein | |
| BBta_1455 | 0 | 14 | -3.318188 | ABC transporter permease | |
| BBta_1456 | 0 | 16 | -2.467908 | ABC transporter ATP-binding protein | |
| BBta_1457 | 0 | 15 | -1.836921 | hypothetical protein | |
| BBta_1458 | 1 | 14 | -0.509706 | transposase | |
| BBta_1459 | -1 | 15 | -1.024972 | ABC transporter ATP-binding protein | |
| BBta_1460 | 0 | 19 | -2.060777 | hypothetical protein | |
| BBta_1461 | 1 | 22 | -2.760722 | hypothetical protein | |
| BBta_1462 | 2 | 23 | -3.485803 | insertion sequence ATP-binding protein y4pL | |
| BBta_1463 | 2 | 24 | -3.944346 | transposase | |
| BBta_1464 | 1 | 28 | -4.705544 | hypothetical protein | |
| BBta_1466 | 1 | 26 | -3.430615 | recombinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1434 | RTXTOXIND | 28 | 0.038 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1451 | ACRIFLAVINRP | 33 | 0.009 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1452 | HTHFIS | 24 | 0.043 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1462 | PF05272 | 28 | 0.031 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 15 | BBta_1477 | BBta_1587 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1477 | -1 | 28 | -3.380884 | insertion sequence ATP-binding protein y4pL | |
| BBta_1480 | -1 | 29 | -4.538152 | hypothetical protein | |
| BBta_1481 | 2 | 30 | -5.318188 | hypothetical protein | |
| BBta_1482 | 3 | 31 | -4.197025 | hypothetical protein | |
| BBta_1483 | 5 | 37 | -4.574944 | hypothetical protein | |
| BBta_1484 | 4 | 34 | -4.427679 | hypothetical protein | |
| BBta_1485 | 3 | 35 | -4.338361 | XRE family transcriptional regulator | |
| BBta_1486 | 4 | 38 | -3.792182 | hypothetical protein | |
| BBta_1487 | 2 | 35 | -1.804390 | hypothetical protein | |
| BBta_1488 | 2 | 33 | -3.097225 | hypothetical protein | |
| BBta_1489 | 1 | 32 | -3.119496 | hypothetical protein | |
| BBta_1490 | 1 | 32 | -2.958963 | hypothetical protein | |
| BBta_1491 | 2 | 35 | -3.450591 | lytic transglycosylase | |
| BBta_1492 | 3 | 35 | -3.923149 | hypothetical protein | |
| BBta_1493 | 3 | 37 | -5.731263 | conjugal transfer coupling protein TraG | |
| BBta_1494 | 3 | 43 | -6.169955 | CopG family protein | |
| BBta_1495 | 3 | 42 | -5.496972 | hypothetical protein | |
| BBta_1496 | 2 | 42 | -5.682683 | hypothetical protein | |
| BBta_1497 | 2 | 40 | -5.292672 | hypothetical protein | |
| BBta_1498 | 2 | 33 | -4.938430 | hypothetical protein | |
| BBta_1499 | 0 | 31 | -4.806958 | hypothetical protein | |
| BBta_1500 | 1 | 29 | -4.189575 | conjugal transfer protein TrbB | |
| BBta_1501 | 2 | 28 | -4.279049 | conjugal transfer protein TrbC | |
| BBta_1502 | 3 | 27 | -3.696870 | conjugal transfer protein TrbD | |
| BBta_1503 | 3 | 30 | -4.091308 | conjugal transfer ATPase TrbE | |
| BBta_1504 | 5 | 30 | -3.883506 | conjugal transfer protein TrbJ | |
| BBta_1505 | 4 | 35 | -4.554769 | conjugal transfer protein TrbL | |
| BBta_1506 | 5 | 34 | -4.974086 | conjugal transfer protein TrbF | |
| BBta_1507 | 5 | 34 | -5.126051 | conjugal transfer protein TrbG | |
| BBta_1508 | 3 | 39 | -5.605528 | conjugal transfer protein TrbI | |
| BBta_1509 | 3 | 36 | -5.754550 | hypothetical protein | |
| BBta_1510 | 2 | 33 | -5.796159 | LysR family transcriptional regulator | |
| BBta_1511 | 3 | 30 | -5.089948 | hypothetical protein | |
| BBta_1512 | 1 | 32 | -5.148826 | metal dependent phosphohydrolase | |
| BBta_1513 | 2 | 35 | -5.423562 | hypothetical protein | |
| BBta_1514 | 2 | 34 | -5.470500 | response regulator receiver | |
| BBta_1515 | 2 | 34 | -5.757105 | secretory protein kinase, cpaF | |
| BBta_1516 | 4 | 34 | -5.254016 | Type II secretion system protein | |
| BBta_1517 | 4 | 35 | -5.466611 | hypothetical protein | |
| BBta_1519 | 6 | 36 | -5.811602 | pilus assembly protein CpaC | |
| BBta_1520 | 8 | 30 | -5.523498 | hypothetical protein | |
| BBta_1521 | 7 | 28 | -5.927628 | hypothetical protein | |
| BBta_1522 | 6 | 29 | -5.480573 | hypothetical protein | |
| BBta_1523 | 7 | 30 | -5.909273 | hypothetical protein | |
| BBta_1525 | 5 | 30 | -5.983268 | hypothetical protein | |
| BBta_1526 | 5 | 28 | -6.561218 | hypothetical protein | |
| BBta_1527 | 2 | 36 | -7.277695 | Flp/Fap pilin component | |
| BBta_1528 | 4 | 38 | -8.623165 | hypothetical protein | |
| BBta_1529 | 3 | 38 | -9.196364 | hypothetical protein | |
| BBta_1530 | 3 | 32 | -7.918143 | hypothetical protein | |
| BBta_1531 | 3 | 32 | -7.752627 | hypothetical protein | |
| BBta_1532 | 3 | 34 | -7.906226 | hypothetical protein | |
| BBta_1533 | 3 | 33 | -7.835915 | chemotaxis protein methyltransferase cheR | |
| BBta_1534 | 2 | 23 | -5.749383 | chemotaxis protein CheY | |
| BBta_1536 | 4 | 25 | -5.799150 | methyl-accepting chemotaxis protein | |
| BBta_1537 | 7 | 34 | -4.782871 | hypothetical protein | |
| BBta_1538 | 6 | 31 | -5.262445 | transposase | |
| BBta_1539 | 7 | 27 | -4.000768 | transposase | |
| BBta_1540 | 6 | 26 | -4.149155 | transposase | |
| BBta_1541 | 6 | 25 | -4.885298 | hypothetical protein | |
| BBta_1542 | 5 | 25 | -4.184418 | hypothetical protein | |
| BBta_1543 | 6 | 26 | -4.572819 | outer-membrane protein | |
| BBta_1544 | 5 | 25 | -4.845928 | outer membrane lipoprotein (NodT-like), RND | |
| BBta_1545 | 4 | 27 | -5.876569 | HlyD family heavy metal efflux pump | |
| BBta_1546 | 5 | 29 | -6.013759 | cation efflux system protein | |
| BBta_1547 | 7 | 28 | -5.755845 | hypothetical protein | |
| BBta_1548 | 5 | 21 | -5.027725 | hypothetical protein | |
| BBta_1549 | 5 | 19 | -4.265511 | LuxR transcriptional regulator | |
| BBta_1550 | 5 | 19 | -3.519579 | ATP-binding region, ATPase-like protein | |
| BBta_1551 | 3 | 14 | -2.101370 | hypothetical protein | |
| BBta_1552 | 3 | 15 | -2.089436 | OmpA-like transmembrane domain-containing | |
| BBta_1553 | 1 | 18 | -1.626127 | manganese transport protein | |
| BBta_1554 | 4 | 30 | -3.220727 | hypothetical protein | |
| BBta_1555 | 4 | 29 | -3.992485 | manganese transport regulator MntR | |
| BBta_1556 | 3 | 31 | -4.627306 | manganese/divalent cation transport protein | |
| BBta_1557 | 7 | 40 | -5.244415 | MgtC-magnesium transport family protein | |
| BBta_1558 | 7 | 41 | -5.502096 | hypothetical protein | |
| BBta_1559 | 6 | 40 | -5.509311 | hypothetical protein | |
| BBta_1560 | 5 | 39 | -5.338246 | transposase | |
| BBta_1561 | 0 | 26 | -2.819650 | hypothetical protein | |
| BBta_1562 | -1 | 21 | -1.202293 | hypothetical protein | |
| BBta_1563 | -1 | 15 | -1.029471 | hypothetical protein | |
| BBta_1564 | -1 | 13 | -1.476648 | hypothetical protein | |
| BBta_1565 | 0 | 13 | -1.176253 | hypothetical protein | |
| BBta_1566 | -1 | 13 | -1.027158 | hypothetical protein | |
| BBta_1567 | 0 | 15 | -2.600720 | hypothetical protein | |
| BBta_1568 | 0 | 17 | -3.542808 | cation transport ATPase | |
| BBta_1569 | 2 | 27 | -5.367201 | hypothetical protein | |
| BBta_1570 | 3 | 35 | -5.776861 | hypothetical protein | |
| BBta_1572 | 3 | 38 | -6.291570 | hypothetical protein | |
| BBta_1573 | 3 | 37 | -5.884668 | transposase | |
| BBta_1574 | 4 | 38 | -7.139794 | hypothetical protein | |
| BBta_1575 | 5 | 41 | -6.747076 | hypothetical protein | |
| BBta_1576 | 3 | 41 | -6.504715 | hypothetical protein | |
| BBta_1577 | 3 | 37 | -5.525709 | hypothetical protein | |
| BBta_1578 | 1 | 29 | -3.963634 | hypothetical protein | |
| BBta_1580 | 1 | 26 | -3.430318 | 2-amino-3-ketobutyrate coenzyme A ligase | |
| BBta_1581 | 1 | 21 | -1.539721 | hypothetical protein | |
| BBta_1582 | 1 | 21 | -1.696428 | hypothetical protein | |
| BBta_1583 | 2 | 19 | -1.570472 | hypothetical protein | |
| BBta_1584 | 1 | 18 | -1.556518 | hypothetical protein | |
| BBta_1585 | 2 | 23 | -2.708919 | transposase | |
| BBta_1586 | 0 | 25 | -3.031234 | phosphoglycerate mutase | |
| BBta_1587 | 2 | 20 | -0.793763 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1477 | PF05272 | 28 | 0.031 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1496 | TCRTETB | 55 | 3e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1506 | PF04335 | 51 | 3e-10 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1515 | PF07675 | 30 | 0.015 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1516 | BCTERIALGSPF | 34 | 7e-04 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1519 | BCTERIALGSPD | 150 | 3e-41 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1521 | SYCDCHAPRONE | 45 | 8e-09 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1528 | PREPILNPTASE | 28 | 0.025 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1534 | HTHFIS | 57 | 8e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1536 | PF07201 | 33 | 0.003 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1538 | BCTERIALGSPF | 25 | 0.041 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1545 | RTXTOXIND | 47 | 9e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1546 | ACRIFLAVINRP | 562 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1549 | HTHFIS | 75 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1552 | OMPADOMAIN | 31 | 0.009 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1584 | GPOSANCHOR | 33 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 16 | BBta_1873 | BBta_1899 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1873 | 3 | 14 | -0.038437 | flagellar motor switch protein | |
| BBta_1874 | 2 | 13 | 0.637561 | flagellar assembly protein H | |
| BBta_1875 | 1 | 12 | 0.492940 | flagellar motor switch protein G | |
| BBta_1876 | 1 | 11 | 1.341277 | flagellar MS-ring protein | |
| BBta_1878 | 1 | 10 | 1.573318 | flagellar basal-body rod modification protein | |
| BBta_1880 | 0 | 13 | 1.476514 | flagellar hook length determination protein | |
| BBta_1881 | -1 | 16 | -1.632815 | tRNA-specific 2-thiouridylase MnmA | |
| BBta_1882 | 2 | 22 | -3.899087 | phosphatidyl-N-methylethanolamine | |
| BBta_1883 | 4 | 30 | -5.387592 | hypothetical protein | |
| BBta_1884 | 4 | 33 | -7.829627 | *hypothetical protein | |
| BBta_1886 | 2 | 31 | -5.206187 | hypothetical protein | |
| BBta_1888 | 2 | 27 | -4.368733 | hypothetical protein | |
| BBta_1889 | 2 | 26 | -3.581514 | non-heme chloroperoxidase | |
| BBta_1890 | 2 | 26 | -3.256161 | hypothetical protein | |
| BBta_1891 | 2 | 25 | -2.602199 | hypothetical protein | |
| BBta_1892 | 2 | 24 | -2.084849 | transcriptional regulator | |
| BBta_1894 | 3 | 21 | -2.520521 | twin-arginine translocation pathway signal | |
| BBta_1895 | 4 | 27 | -3.036193 | cytochrome C | |
| BBta_1896 | 2 | 13 | -3.653291 | hypothetical protein | |
| BBta_1897 | -1 | 15 | -3.790831 | hypothetical protein | |
| BBta_1899 | -1 | 14 | -3.531412 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1873 | FLGMOTORFLIN | 92 | 2e-27 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1875 | FLGMOTORFLIG | 302 | e-103 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1876 | FLGMRINGFLIF | 340 | e-113 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1880 | FLGHOOKFLIK | 32 | 0.006 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1897 | SALSPVBPROT | 30 | 7e-04 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein | |||||
| 17 | BBta_1954 | BBta_1963 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1954 | 2 | 14 | -1.716819 | branched chain amino acid ABC transporter | |
| BBta_1955 | 1 | 12 | -1.374129 | branched-chain amino acid ABC transporter | |
| BBta_1956 | 0 | 13 | -0.588617 | branched chain amino acid ABC transporter | |
| BBta_1957 | 1 | 12 | 0.026086 | branched-chain amino acid ABC transporter | |
| BBta_1958 | 1 | 12 | 0.449344 | acylamide amidohydrolase | |
| BBta_1959 | 2 | 12 | 2.121976 | urease accessory protein UreE | |
| BBta_1960 | 2 | 10 | 2.588575 | urease accessory protein UreF | |
| BBta_1961 | 3 | 10 | 2.277108 | bifunctional urease subunit gamma/beta | |
| BBta_1962 | 2 | 9 | 2.525694 | urease subunit alpha | |
| BBta_1963 | 2 | 8 | 3.575068 | urease accessory protein UreG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1957 | PF05272 | 29 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1962 | UREASE | 872 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 18 | BBta_1998 | BBta_2008 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1998 | 2 | 14 | -0.107694 | Ni/Fe-hydrogenase, 1 b-type cytochrome subunit | |
| BBta_1999 | 4 | 15 | 1.233441 | hydrogenase maturation | |
| BBta_2000 | 2 | 18 | 1.222999 | hydrogenase expression/formation | |
| BBta_2001 | 1 | 18 | 1.077991 | hydrogenase expression/formation | |
| BBta_2002 | 3 | 16 | -0.391654 | hydrogenase expression/formation | |
| BBta_2003 | 5 | 16 | 0.941481 | rubredoxin | |
| BBta_2004 | 5 | 16 | 0.904444 | hydrogenase expression/formation | |
| BBta_2005 | 5 | 14 | 0.565170 | hydrogenase expression/formation | |
| BBta_2006 | 6 | 12 | 0.524840 | hydrogenase expression/formation | |
| BBta_2007 | 4 | 10 | 0.301159 | hydrogenase nickel incorporation | |
| BBta_2008 | 2 | 9 | 0.695842 | carbamoyl phosphate phosphatase, (NiFe) |
| 19 | BBta_2100 | BBta_2105 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2100 | 2 | 13 | 1.846389 | hypothetical protein | |
| BBta_2101 | 2 | 12 | 1.451017 | Atrazine chlorohydrolase | |
| BBta_2102 | 2 | 13 | 1.181526 | uracil phosphoribosyltransferase | |
| BBta_2103 | 2 | 12 | 1.045841 | hypothetical protein | |
| BBta_2104 | 2 | 13 | 0.902831 | hypothetical protein | |
| BBta_2105 | 2 | 12 | 1.364571 | N-isopropylammelide isopropylaminohydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2105 | UREASE | 44 | 1e-06 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 20 | BBta_2628 | BBta_2648 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2628 | -1 | 22 | -3.309316 | hypothetical protein | |
| BBta_2629 | 0 | 24 | -3.435947 | AraC family transcriptional regulator | |
| BBta_2630 | 0 | 24 | -3.116517 | enoyl-CoA hydratase | |
| BBta_2631 | 1 | 25 | -3.090448 | formyl-coenzyme A transferase L-carnitine | |
| BBta_2632 | 1 | 28 | -3.458417 | fumarylacetoacetate (FAA) hydrolase | |
| BBta_2633 | 2 | 26 | -4.012420 | carbon-monoxide dehydrogenase small subunit | |
| BBta_2634 | 2 | 23 | -3.471653 | carbon-monoxide dehydrogenase large subunit | |
| BBta_2635 | -1 | 16 | -3.320339 | carbon monoxide dehydrogenase medium subunit | |
| BBta_2637 | -1 | 14 | -3.267459 | enoyl-CoA hydratase | |
| BBta_2638 | -1 | 12 | -1.128550 | hypothetical protein | |
| BBta_2639 | -1 | 11 | 0.841628 | medium-chain-fatty-acid--CoA ligase | |
| BBta_2640 | 1 | 12 | 2.571606 | RuBisCO operon transcriptional regulator | |
| BBta_2641 | 2 | 11 | 2.858529 | ribulose bisophosphate carboxylase | |
| BBta_2642 | 5 | 12 | 4.675840 | ribulose 1,5-bisphosphate carboxylase small | |
| BBta_2643 | 6 | 13 | 5.217328 | carboxysome structural peptide CsoS2 | |
| BBta_2644 | 7 | 17 | 4.372946 | carboxysome structural peptide | |
| BBta_2645 | 3 | 14 | 4.317156 | carboxysome peptide A | |
| BBta_2646 | 3 | 13 | 3.424458 | carboxysome peptide B | |
| BBta_2647 | 2 | 12 | 3.235379 | major carboxysome shell protein 1C | |
| BBta_2648 | 1 | 11 | 3.157156 | major carboxysome shell protein 1A |
| 21 | BBta_2658 | BBta_2667 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2658 | 2 | 29 | -3.092366 | hypothetical protein | |
| BBta_2659 | 1 | 28 | -3.269086 | LysR family transcriptional regulator | |
| BBta_2660 | 1 | 28 | -3.148098 | transposase | |
| BBta_2661 | -1 | 25 | -2.941357 | transposase | |
| BBta_2662 | 0 | 27 | -2.912352 | LysR family transcriptional regulator | |
| BBta_2663 | 1 | 21 | -3.023552 | NADH-azoreductase, FMN-dependent | |
| BBta_2664 | 1 | 23 | -3.291853 | pirin-like protein | |
| BBta_2665 | 2 | 20 | -2.908831 | hypothetical protein | |
| BBta_2666 | 2 | 18 | -2.691067 | iron-regulated membrane protein | |
| BBta_2667 | 4 | 14 | -2.539133 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2665 | NUCEPIMERASE | 34 | 4e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 22 | BBta_3043 | BBta_3049 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3043 | 2 | 10 | 1.035871 | sufE-like protein | |
| BBta_3044 | 1 | 12 | 1.164571 | hypothetical protein | |
| BBta_3045 | 2 | 11 | 1.100917 | multi-sensor signal transduction histidine | |
| BBta_3046 | 2 | 9 | 0.916823 | hypothetical protein | |
| BBta_3047 | 3 | 10 | 0.058168 | hypothetical protein | |
| BBta_3048 | 3 | 10 | 0.026686 | hypothetical protein | |
| BBta_3049 | 2 | 11 | 0.067277 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3045 | PF06580 | 44 | 8e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 23 | BBta_3119 | BBta_3185 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3119 | 3 | 23 | -0.849724 | glutathione S-transferase | |
| BBta_3123 | 1 | 18 | -0.500431 | hypothetical protein | |
| BBta_3124 | 0 | 12 | 2.083319 | integrase/recombinase | |
| BBta_3125 | 2 | 14 | 1.801919 | hypothetical protein | |
| BBta_3126 | 1 | 15 | 1.616242 | hypothetical protein | |
| BBta_3127 | -1 | 12 | 0.514617 | hypothetical protein | |
| BBta_3128 | -1 | 10 | 1.509458 | sulfopyruvate decarboxylase subunit alpha | |
| BBta_3129 | -1 | 9 | 1.883256 | D-3-phosphoglycerate dehydrogenase (PGDH) | |
| BBta_3130 | -2 | 9 | 1.744912 | hypothetical protein | |
| BBta_3131 | -2 | 8 | 2.585698 | phosphinothricin N-acetyltransferase | |
| BBta_3132 | -1 | 8 | 2.560887 | ornithine decarboxylase | |
| BBta_3133 | 4 | 11 | 3.539421 | nicotinate-nucleotide--dimethylbenzimidazole | |
| BBta_3134 | 2 | 11 | 2.847886 | alpha-ribazole phosphatase | |
| BBta_3135 | 3 | 12 | 2.510617 | cobalamin-5'-phosphate synthase | |
| BBta_3136 | 2 | 14 | 2.456855 | aminotransferase | |
| BBta_3137 | 2 | 13 | 1.701483 | adenosylcobinamide-phosphate synthase | |
| BBta_3138 | 1 | 11 | 1.296846 | cobyric acid synthase | |
| BBta_3139 | 1 | 12 | 2.368274 | cob(I)yrinic acid a,c-diamide | |
| BBta_3140 | 2 | 14 | 2.689900 | adenosylcobinamide kinase | |
| BBta_3141 | 2 | 14 | 2.586830 | hypothetical protein | |
| BBta_3142 | 2 | 15 | 2.291064 | hypothetical protein | |
| BBta_3143 | 2 | 15 | 2.507023 | cobalamin synthesis protein cobW | |
| BBta_3144 | 3 | 15 | 2.933439 | cobaltochelatase subunit CobN | |
| BBta_3145 | 3 | 16 | 3.002130 | precorrin-3B synthase (cobG) | |
| BBta_3146 | 3 | 16 | 2.870607 | precorrin-8X methylmutase | |
| BBta_3147 | 2 | 16 | 2.866336 | cobalt-factor II | |
| BBta_3148 | 3 | 13 | 3.845430 | precorrin-3 methyltransferase | |
| BBta_3149 | 3 | 13 | 3.945300 | precorrin-6A reductase | |
| BBta_3150 | 1 | 14 | 3.517086 | precorrin-6Y C5,15-methyltransferase | |
| BBta_3151 | 1 | 12 | 2.858135 | CobE protein | |
| BBta_3152 | 0 | 13 | 2.156334 | precorrin-4 C(11)-methyltransferase | |
| BBta_3153 | 0 | 12 | 1.928707 | cobalt-precorrin-6A synthase | |
| BBta_3154 | 0 | 13 | 0.860075 | cobyrinic acid a,c-diamide synthase | |
| BBta_3155 | 3 | 11 | -1.217580 | cob(II)yrinic acid a,c-diamide reductase | |
| BBta_3156 | 3 | 10 | -1.137889 | hypothetical protein | |
| BBta_3157 | 4 | 12 | -1.202854 | hypothetical protein | |
| BBta_3158 | 7 | 12 | -2.131894 | RNA polymerase sigma factor | |
| BBta_3159 | 6 | 10 | -2.817558 | flagellin | |
| BBta_3160 | 5 | 11 | -2.797981 | flagellar hook-associated proteinFliD | |
| BBta_3161 | 2 | 17 | -2.081597 | flagellar protein fliS | |
| BBta_3162 | 4 | 12 | -2.935022 | hypothetical protein | |
| BBta_3164 | 4 | 11 | -3.122493 | basal-body rod modification protein flgD | |
| BBta_3165 | 1 | 14 | -1.645136 | flagellar hook protein FlgE | |
| BBta_3166 | 0 | 14 | -2.123218 | hypothetical protein | |
| BBta_3167 | 1 | 14 | -2.134540 | hypothetical protein | |
| BBta_3168 | 1 | 13 | -1.962151 | flagellar hook-associated protein FlgK | |
| BBta_3169 | 3 | 13 | -1.110688 | flagellar hook-associated protein FlgL | |
| BBta_3170 | 3 | 8 | -0.454134 | short-chain dehydrogenase | |
| BBta_3171 | 3 | 7 | -0.604715 | cytochrome o ubiquinol oxidase subunit I | |
| BBta_3172 | 4 | 12 | 1.579327 | hypothetical protein | |
| BBta_3174 | 2 | 20 | -3.109817 | hypothetical protein | |
| BBta_3175 | 2 | 18 | -3.437539 | hypothetical protein | |
| BBta_3176 | 3 | 20 | -3.601998 | O-acetylhomoserine | |
| BBta_3177 | 4 | 22 | -4.278721 | NADH dehydrogenase/NAD(P)H nitroreductase | |
| BBta_3178 | 2 | 19 | -3.731369 | ABC transporter substrate-binding protein | |
| BBta_3179 | 1 | 20 | -3.811073 | hypothetical protein | |
| BBta_3181 | 0 | 11 | 1.226682 | hypothetical protein | |
| BBta_3182 | 0 | 12 | 1.662976 | TetR family transcriptional regulator | |
| BBta_3183 | 2 | 13 | 2.036981 | O-methyltransferase | |
| BBta_3184 | 2 | 14 | 2.599215 | polysaccharide deacetylase | |
| BBta_3185 | 3 | 13 | 3.009103 | ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3125 | RTXTOXINA | 29 | 0.004 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3131 | SACTRNSFRASE | 32 | 7e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3138 | BACINVASINB | 30 | 0.028 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3159 | FLAGELLIN | 89 | 3e-22 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3165 | FLGHOOKAP1 | 38 | 6e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3168 | FLGHOOKAP1 | 113 | 1e-28 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3170 | DHBDHDRGNASE | 74 | 1e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3182 | HTHTETR | 63 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 24 | BBta_3214 | BBta_3235 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3214 | 3 | 14 | 3.451473 | hypothetical protein | |
| BBta_3216 | 4 | 13 | 3.705867 | hypothetical protein | |
| BBta_3217 | 4 | 12 | 3.804262 | hypothetical protein | |
| BBta_3218 | 3 | 12 | 4.066992 | hypothetical protein | |
| BBta_3219 | 2 | 9 | 3.278702 | two component transcriptional regulator | |
| BBta_3220 | -1 | 7 | 2.021102 | two-component sensor histidine kinase | |
| BBta_3221 | -1 | 8 | 0.920594 | hypothetical protein | |
| BBta_3222 | -2 | 8 | -0.259529 | hypothetical protein | |
| BBta_3223 | -1 | 10 | -0.253869 | carbohydrate kinase | |
| BBta_3224 | -1 | 11 | -0.862665 | transcriptional regulator | |
| BBta_3225 | 1 | 11 | -0.059454 | sugar ABC transporter periplasmic substrate | |
| BBta_3226 | 3 | 12 | 0.999033 | sugar ABC transporter permease | |
| BBta_3227 | 3 | 12 | 1.226471 | sugar ABC transporter permease | |
| BBta_3228 | 3 | 12 | 1.797215 | sugar ABC transporter ATP-binding protein | |
| BBta_3229 | 1 | 12 | 1.480663 | sugar ABC transporter ATP-binding protein | |
| BBta_3230 | 0 | 11 | -0.198244 | carbohydrate kinase | |
| BBta_3231 | -1 | 11 | -1.578981 | D-3-phosphoglycerate dehydrogenase | |
| BBta_3232 | -1 | 12 | -1.935505 | L-fuculose phosphate aldolase | |
| BBta_3233 | -1 | 13 | -1.759139 | glycerol-3-phosphate dehydrogenase | |
| BBta_3234 | -1 | 14 | -2.805832 | vanillate O-demethylase oxidoreductase | |
| BBta_3235 | -1 | 12 | -3.476531 | toluate 1,2-dioxygenase subunit alpha |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3218 | PERTACTIN | 29 | 0.005 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3219 | HTHFIS | 89 | 1e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3234 | OMPADOMAIN | 29 | 0.028 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 25 | BBta_3306 | BBta_3323 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3306 | 2 | 16 | -1.916762 | alkanesulfonate ABC transporter ATP binding | |
| BBta_3307 | 5 | 19 | -2.588873 | acyl-CoA dehydrogenase | |
| BBta_3308 | 7 | 25 | -4.119257 | sulfonate monooxygenase | |
| BBta_3309 | 9 | 32 | -6.391561 | alkanesulfonate ABC transporter substrate | |
| BBta_3310 | 9 | 37 | -7.490324 | hypothetical protein | |
| BBta_3311 | 9 | 37 | -7.535332 | XRE family transcriptional regulator | |
| BBta_3312 | 8 | 38 | -8.741938 | hypothetical protein | |
| BBta_3313 | 8 | 37 | -8.505579 | hypothetical protein | |
| BBta_3314 | 8 | 30 | -6.894501 | hypothetical protein | |
| BBta_3315 | 5 | 23 | -3.297372 | hypothetical protein | |
| BBta_3316 | 6 | 20 | -1.224021 | hypothetical protein | |
| BBta_3318 | 5 | 20 | 0.203032 | hypothetical protein | |
| BBta_3319 | 6 | 17 | -1.239998 | hypothetical protein | |
| BBta_3320 | 5 | 21 | -2.902627 | hypothetical protein | |
| BBta_3321 | 5 | 24 | -3.095457 | hypothetical protein | |
| BBta_3322 | 5 | 23 | -3.229856 | hypothetical protein | |
| BBta_3323 | 1 | 22 | -3.156850 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3306 | PF05272 | 29 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3322 | IGASERPTASE | 32 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 26 | BBta_3427 | BBta_3447 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3427 | 2 | 15 | 1.217439 | cation efflux system protein cusB | |
| BBta_3428 | 2 | 20 | -0.180721 | hypothetical protein | |
| BBta_3429 | -1 | 22 | -1.792678 | hypothetical protein | |
| BBta_3430 | 1 | 24 | -2.473828 | hypothetical protein | |
| BBta_3431 | 1 | 24 | -3.571732 | hypothetical protein | |
| BBta_3432 | 0 | 26 | -4.416587 | hypothetical protein | |
| BBta_3433 | 0 | 30 | -4.528029 | hypothetical protein | |
| BBta_3434 | 1 | 31 | -4.608712 | hypothetical protein | |
| BBta_3435 | 1 | 32 | -4.866898 | UspA stress protein | |
| BBta_3436 | 1 | 34 | -4.144739 | ABC transporter ATP-binding protein | |
| BBta_3437 | 2 | 35 | -4.191423 | hypothetical protein | |
| BBta_3438 | 3 | 42 | -5.267332 | secretion protein HlyD | |
| BBta_3439 | 4 | 43 | -5.890103 | hypothetical protein | |
| BBta_3441 | 3 | 42 | -5.424841 | hypothetical protein | |
| BBta_3442 | 2 | 40 | -5.030330 | cation-transporting ATPase | |
| BBta_3443 | 4 | 43 | -7.432142 | hypothetical protein | |
| BBta_3444 | 1 | 28 | -5.976425 | hypothetical protein | |
| BBta_3445 | 0 | 22 | -4.294938 | hypothetical protein | |
| BBta_3446 | -1 | 22 | -4.250693 | hypothetical protein | |
| BBta_3447 | -1 | 17 | -3.624701 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3427 | RTXTOXIND | 51 | 8e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3436 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3438 | RTXTOXIND | 45 | 3e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 27 | BBta_3611 | BBta_3619 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3611 | 2 | 15 | 0.982719 | NADP-dependent oxidoreductase | |
| BBta_3612 | 3 | 15 | -0.733683 | hypothetical protein | |
| BBta_3613 | 3 | 18 | -1.905605 | SUN-family protein, RNA methyltransferase | |
| BBta_3614 | 4 | 25 | -4.160507 | GMP synthase | |
| BBta_3615 | 4 | 41 | -6.085429 | hypothetical protein | |
| BBta_3618 | 5 | 48 | -5.272963 | hypothetical protein | |
| BBta_3619 | 3 | 41 | -4.450087 | hypothetical protein |
| 28 | BBta_3729 | BBta_3747 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3729 | 2 | 15 | 1.263532 | hypothetical protein | |
| BBta_3730 | 2 | 16 | 1.179089 | carbon monoxide dehydrogenase medium subunit, | |
| BBta_3731 | 2 | 15 | 1.002401 | carbon-monoxide dehydrogenase small subunit, | |
| BBta_3732 | 2 | 16 | 1.164571 | xanthine dehydrogenase, molybdenum binding | |
| BBta_3733 | 2 | 15 | 1.761140 | branched-chain amino acid ABC transporter | |
| BBta_3734 | 3 | 16 | 2.308985 | branched-chain amino acid ABC transporter | |
| BBta_3735 | 3 | 13 | 2.209377 | branched-chain amino acid ABC transporter | |
| BBta_3736 | 3 | 12 | 2.916498 | branched-chain amino acid ABC transporter | |
| BBta_3737 | 0 | 12 | 2.576439 | branched-chain amino acid ABC transporter | |
| BBta_3738 | 1 | 11 | 1.993243 | ethanolamine ammonia-lyase light chain | |
| BBta_3739 | 0 | 10 | 2.087974 | ethanolamine ammonia-lyase heavy chain | |
| BBta_3740 | 0 | 11 | 2.316609 | hypothetical protein | |
| BBta_3741 | -1 | 10 | 2.837164 | hypothetical protein | |
| BBta_3742 | -1 | 10 | 2.837811 | ribonuclease Z | |
| BBta_3743 | 0 | 11 | 3.102095 | glycerophosphoryl diester phosphodiesterase | |
| BBta_3744 | 0 | 12 | 3.488809 | protein serine-threonine phosphatase | |
| BBta_3745 | -1 | 14 | 2.741547 | hypothetical protein | |
| BBta_3746 | -1 | 18 | 3.004536 | hypothetical protein | |
| BBta_3747 | 2 | 16 | 2.234907 | **hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3729 | TYPE3IMRPROT | 24 | 0.049 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3736 | PF05272 | 28 | 0.037 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 29 | BBta_3890 | BBta_3910 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3890 | 2 | 11 | -1.148933 | hypothetical protein | |
| BBta_3891 | 2 | 13 | -1.242975 | GNAT family acetyltransferase | |
| BBta_3892 | 0 | 11 | -1.166432 | hypothetical protein | |
| BBta_3893 | 1 | 12 | -1.311759 | hypothetical protein | |
| BBta_3894 | 1 | 15 | -2.126635 | sensor histidine kinase | |
| BBta_3895 | 1 | 20 | -2.355638 | hypothetical protein | |
| BBta_3896 | 3 | 20 | -2.983577 | hypothetical protein | |
| BBta_3897 | 2 | 20 | -3.024723 | oxidoreductase NAD(P)-binding subunit | |
| BBta_3899 | 2 | 19 | -3.436124 | hypothetical protein | |
| BBta_3900 | 1 | 19 | -3.016220 | hypothetical protein | |
| BBta_3901 | 2 | 19 | -2.626043 | hypothetical protein | |
| BBta_3902 | 3 | 21 | -3.272385 | hypothetical protein | |
| BBta_3904 | 2 | 26 | -4.641881 | acyltransferase | |
| BBta_3905 | 2 | 33 | -6.963438 | hypothetical protein | |
| BBta_3906 | 3 | 30 | -6.034853 | hypothetical protein | |
| BBta_3907 | 4 | 33 | -6.713798 | hypothetical protein | |
| BBta_3908 | 4 | 33 | -6.721493 | hypothetical protein | |
| BBta_3909 | 3 | 31 | -6.572619 | acyltransferase | |
| BBta_3910 | 2 | 9 | 0.117780 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3897 | DHBDHDRGNASE | 85 | 1e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3899 | TCRTETOQM | 24 | 0.019 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 30 | BBta_4174 | BBta_4181 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4174 | 6 | 24 | -4.402369 | acyltransferase | |
| BBta_4176 | 10 | 38 | -7.678082 | *hypothetical protein | |
| BBta_4177 | 10 | 39 | -6.693477 | hypothetical protein | |
| BBta_4178 | 9 | 41 | -6.274938 | hypothetical protein | |
| BBta_4179 | 8 | 40 | -5.335807 | hypothetical protein | |
| BBta_4180 | 1 | 17 | -1.827184 | hypothetical protein | |
| BBta_4181 | 2 | 14 | -2.345158 | hypothetical protein |
| 31 | BBta_4311 | BBta_4316 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4311 | 2 | 14 | -1.334161 | L-glutamine synthetase | |
| BBta_4312 | 2 | 13 | -0.965393 | glutamine synthetase | |
| BBta_4313 | 2 | 13 | -1.163691 | protein tyrosine/serine phosphatase | |
| BBta_4314 | 3 | 14 | -1.276507 | hypothetical protein | |
| BBta_4315 | 3 | 13 | -1.529286 | hypothetical protein | |
| BBta_4316 | 3 | 13 | -1.531049 | sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4316 | HTHFIS | 76 | 4e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 32 | BBta_4373 | BBta_4380 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4373 | 10 | 19 | -0.108244 | single-stranded DNA-binding protein | |
| BBta_4374 | 4 | 19 | 0.182866 | outer-membrane protein | |
| BBta_4375 | 4 | 18 | 0.317655 | outer-membrane protein | |
| BBta_4376 | 4 | 19 | 0.338124 | outer-membrane protein | |
| BBta_4377 | 3 | 17 | 0.108604 | outer-membrane protein | |
| BBta_4378 | 1 | 15 | 0.774012 | outer-membrane protein | |
| BBta_4379 | 1 | 14 | 0.614175 | excinuclease ABC subunit A | |
| BBta_4380 | 3 | 13 | 1.077387 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4374 | OMPADOMAIN | 38 | 3e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4376 | OMPADOMAIN | 37 | 5e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4377 | OMPADOMAIN | 43 | 4e-07 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4378 | OMPADOMAIN | 31 | 0.002 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 33 | BBta_4437 | BBta_4444 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4437 | 2 | 12 | 1.843112 | oxidoreductase | |
| BBta_4438 | 4 | 12 | 2.026175 | exodeoxyribonuclease III | |
| BBta_4439 | 5 | 13 | 2.960429 | beta-lactamase | |
| BBta_4440 | 6 | 15 | 2.751872 | urease accessory protein ureD | |
| BBta_4441 | 8 | 18 | 1.967784 | urease accessory protein UreG | |
| BBta_4442 | 4 | 17 | 1.463524 | urease subunit alpha | |
| BBta_4443 | 2 | 15 | 1.371610 | bifunctional urease subunit gamma/beta | |
| BBta_4444 | 2 | 16 | 1.096031 | urease accessory protein UreF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4439 | BLACTAMASEA | 325 | e-114 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4442 | UREASE | 717 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 34 | BBta_4503 | BBta_4509 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4503 | 2 | 11 | 0.932283 | carboxymethylenebutenolidase | |
| BBta_4504 | 1 | 9 | -0.001232 | lipid-A-disaccharide synthase | |
| BBta_4505 | 3 | 11 | -1.181216 | hypothetical protein | |
| BBta_4506 | 3 | 11 | -1.131909 | UDP-N-acetylglucosamine acyltransferase | |
| BBta_4507 | 3 | 11 | -0.690312 | (3R)-hydroxymyristoyl-ACP dehydratase | |
| BBta_4508 | 2 | 11 | -0.146217 | UDP-3-O-[3-hydroxymyristoyl] glucosamine | |
| BBta_4509 | 2 | 12 | -0.267008 | surface antigen domain-containing protein |
| 35 | BBta_4565 | BBta_4571 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4565 | 2 | 11 | -0.333557 | *peptidase T | |
| BBta_4566 | 2 | 13 | -0.547225 | S-adenosyl-L-methionine (SAM)-dependent | |
| BBta_4567 | 3 | 14 | -1.447911 | hypothetical protein | |
| BBta_4568 | 4 | 14 | -2.059023 | hypothetical protein | |
| BBta_4569 | 6 | 16 | -2.544372 | cyclic nucleotide binding protein | |
| BBta_4570 | 4 | 15 | -1.089186 | *ATP-dependent protease La | |
| BBta_4571 | 2 | 12 | 0.001581 | ATP-dependent protease ATP-binding subunit ClpX |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4570 | PF02370 | 35 | 3e-04 | M protein repeat | |
>PF02370#M protein repeat | |||||
| 36 | BBta_4692 | BBta_4708 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4692 | 2 | 14 | -0.360031 | SsrA-binding protein | |
| BBta_4693 | 2 | 13 | -0.538087 | large-conductance mechanosensitive channel | |
| BBta_4694 | 1 | 10 | -0.371760 | dihydrodipicolinate synthase | |
| BBta_4695 | 3 | 15 | -0.460313 | lytic transglycosylase | |
| BBta_4696 | 5 | 19 | -1.686998 | porin domain-containing protein | |
| BBta_4698 | 5 | 18 | -1.456754 | porin domain-containing protein | |
| BBta_4699 | 1 | 16 | -1.007290 | hypothetical protein | |
| BBta_4700 | 2 | 17 | -0.708312 | hypothetical protein | |
| BBta_4701 | 4 | 17 | -0.569533 | porin domain-containing protein | |
| BBta_4702 | -1 | 26 | -0.448886 | *hypothetical protein | |
| BBta_4703 | -1 | 25 | -1.577595 | TetR family transcriptional regulator | |
| BBta_4704 | -3 | 13 | -1.136125 | drug resistance transporter | |
| BBta_4705 | -1 | 11 | -1.521891 | hypothetical protein | |
| BBta_4706 | 0 | 12 | -0.201950 | hypothetical protein | |
| BBta_4707 | 1 | 12 | -0.551116 | hypothetical protein | |
| BBta_4708 | 2 | 14 | -0.567674 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4693 | MECHCHANNEL | 142 | 7e-47 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4694 | CARBMTKINASE | 29 | 0.019 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4695 | IGASERPTASE | 30 | 0.043 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4703 | HTHTETR | 42 | 2e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4704 | TCRTETB | 59 | 1e-11 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4706 | ISCHRISMTASE | 25 | 0.038 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 37 | BBta_4809 | BBta_4814 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4809 | 4 | 13 | 1.856196 | oxidoreductase subunit | |
| BBta_4810 | 5 | 12 | 1.856554 | iron-sulfur-binding protein subunit of an | |
| BBta_4811 | 3 | 12 | 2.103905 | oxidoreductase subunit | |
| BBta_4812 | 4 | 14 | 1.925127 | hypothetical protein | |
| BBta_4813 | 3 | 14 | 1.772178 | hypothetical protein | |
| BBta_4814 | 3 | 13 | 1.619013 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4814 | IGASERPTASE | 48 | 2e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 38 | BBta_4860 | BBta_4868 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4860 | 3 | 14 | 1.996135 | luciferase-like protein alkanesulfonate | |
| BBta_4861 | 5 | 12 | 2.024928 | ABC transporter permease | |
| BBta_4862 | 3 | 12 | 1.605556 | ABC transporter permease | |
| BBta_4863 | 4 | 11 | 0.751226 | ABC transporter ATP-binding protein | |
| BBta_4864 | 3 | 14 | 0.456144 | oligopeptide ABC transporter ATP-binding | |
| BBta_4865 | 3 | 22 | -1.418275 | hypothetical protein | |
| BBta_4866 | 1 | 12 | 2.648691 | hypothetical protein | |
| BBta_4867 | 1 | 13 | 2.411529 | hypothetical protein | |
| BBta_4868 | 3 | 13 | 2.277802 | hypothetical protein |
| 39 | BBta_4932 | BBta_5006 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4932 | 5 | 18 | 0.411715 | deoxyribodipyrimidine photo-lyase type I | |
| BBta_4933 | 4 | 23 | -2.539133 | histone-like DNA-binding protein | |
| BBta_4934 | 3 | 23 | -1.807317 | hypothetical protein | |
| BBta_4935 | 4 | 25 | -2.802401 | phage-like integrase | |
| BBta_4937 | 5 | 30 | -5.281422 | hypothetical protein | |
| BBta_4938 | 5 | 30 | -4.822667 | hypothetical protein | |
| BBta_4941 | 5 | 26 | -2.808837 | hypothetical protein | |
| BBta_4942 | 6 | 27 | -1.823784 | DNA-invertase | |
| BBta_4943 | 5 | 26 | -1.929753 | hypothetical protein | |
| BBta_4944 | 4 | 25 | -0.613207 | hypothetical protein | |
| BBta_4945 | 6 | 26 | -2.488693 | hypothetical protein | |
| BBta_4946 | 5 | 25 | -3.319075 | hypothetical protein | |
| BBta_4947 | 6 | 31 | -5.568478 | hypothetical protein | |
| BBta_4948 | 6 | 34 | -5.734955 | hypothetical protein | |
| BBta_4949 | 6 | 38 | -7.005126 | hypothetical protein | |
| BBta_4950 | 6 | 38 | -6.825802 | hypothetical protein | |
| BBta_4951 | 2 | 30 | -3.091382 | *prophage integrase | |
| BBta_4952 | 1 | 34 | -1.991248 | hypothetical protein | |
| BBta_4953 | 0 | 29 | -1.501019 | hypothetical protein | |
| BBta_4954 | -1 | 28 | -1.758903 | hypothetical protein | |
| BBta_4956 | 3 | 33 | -4.760350 | hypothetical protein | |
| BBta_4957 | 5 | 35 | -6.045270 | hypothetical protein | |
| BBta_4958 | 6 | 35 | -6.359338 | protein-L-isoaspartate(D-aspartate) | |
| BBta_4959 | 6 | 37 | -6.589148 | hypothetical protein | |
| BBta_4960 | 6 | 39 | -7.168763 | insertion sequence transposase protein | |
| BBta_4962 | 7 | 39 | -7.215110 | hypothetical protein | |
| BBta_4963 | 6 | 39 | -6.344492 | hypothetical protein | |
| BBta_4964 | 5 | 37 | -5.277219 | hypothetical protein | |
| BBta_4965 | 4 | 32 | -5.121868 | hypothetical protein | |
| BBta_4966 | 2 | 29 | -5.343880 | hypothetical protein | |
| BBta_4969 | 2 | 25 | -3.937957 | hypothetical protein | |
| BBta_4972 | 2 | 24 | -4.375659 | arylsulfatase regulatory protein | |
| BBta_4973 | 4 | 27 | -4.386405 | hypothetical protein | |
| BBta_4975 | 4 | 31 | -4.938351 | integrase core subunit | |
| BBta_4977 | 5 | 40 | -7.789471 | hypothetical protein | |
| BBta_4978 | 3 | 27 | -5.124010 | IS66 family insertion sequence transposase | |
| BBta_4979 | 3 | 29 | -5.930373 | hypothetical protein | |
| BBta_4980 | 2 | 26 | -5.319220 | transposase | |
| BBta_4981 | 2 | 25 | -5.367984 | hypothetical protein | |
| BBta_4983 | 1 | 21 | -4.137412 | hypothetical protein | |
| BBta_4984 | 1 | 16 | -1.538841 | transposase | |
| BBta_4987 | 0 | 26 | -3.716531 | insertion sequence transposase protein | |
| BBta_4988 | 1 | 24 | -4.790665 | acyltransferase family 3 protein | |
| BBta_4989 | 3 | 27 | -5.027559 | hypothetical protein | |
| BBta_4990 | 2 | 25 | -4.257116 | hypothetical protein | |
| BBta_4991 | 1 | 24 | -3.342232 | hypothetical protein | |
| BBta_4992 | 1 | 23 | -1.907243 | hypothetical protein | |
| BBta_4993 | 2 | 22 | -1.876230 | hypothetical protein | |
| BBta_4994 | 2 | 23 | -0.978560 | hypothetical protein | |
| BBta_4995 | -2 | 12 | 0.529455 | hypothetical protein | |
| BBta_4996 | -1 | 11 | 1.183772 | hypothetical protein | |
| BBta_4997 | -1 | 11 | 1.290493 | hypothetical protein | |
| BBta_4998 | -1 | 11 | 1.067247 | glyoxalase | |
| BBta_4999 | -1 | 12 | 1.360295 | hypothetical protein | |
| BBta_5000 | -2 | 14 | 1.118909 | multi-sensor signal transduction histidine | |
| BBta_5001 | 2 | 17 | 0.827068 | hypothetical protein | |
| BBta_5002 | 1 | 17 | 0.388876 | dihydrodipicolinate synthase | |
| BBta_5003 | 1 | 15 | -0.259717 | short-chain dehydrogenase/reductase (SDR) | |
| BBta_5004 | 2 | 13 | -1.294446 | dehydratase | |
| BBta_5005 | 1 | 13 | -1.372177 | hypothetical protein | |
| BBta_5006 | 2 | 13 | -0.905823 | acetyl-CoA acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4941 | PF05272 | 216 | 2e-61 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4943 | PF05272 | 28 | 0.042 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4957 | FIMREGULATRY | 29 | 0.006 | Escherichia coli: P pili regulatory PapB protein si... | |
>FIMREGULATRY#Escherichia coli: P pili regulatory PapB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4964 | V8PROTEASE | 47 | 7e-08 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5003 | DHBDHDRGNASE | 87 | 3e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 40 | BBta_5154 | BBta_5167 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5154 | 2 | 14 | 0.633554 | branched chain amino acid ABC transporter | |
| BBta_5155 | 4 | 13 | 2.383745 | *rRNA methylase | |
| BBta_5156 | 5 | 15 | 1.911285 | hypothetical protein | |
| BBta_5157 | 0 | 15 | 2.011781 | hypothetical protein | |
| BBta_5159 | -2 | 15 | 1.849929 | hypothetical protein | |
| BBta_5160 | -1 | 16 | 1.542968 | *hypothetical protein | |
| BBta_5161 | 5 | 17 | 0.332070 | hypothetical protein | |
| BBta_5162 | 7 | 24 | -1.034898 | TetR family transcriptional regulator | |
| BBta_5163 | 10 | 26 | -1.596534 | hypothetical protein | |
| BBta_5165 | 13 | 28 | -2.305866 | hypothetical protein | |
| BBta_5166 | 12 | 24 | -2.256182 | hypothetical protein | |
| BBta_5167 | 7 | 17 | -1.189927 | outer-membrane immunogenic protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5162 | HTHTETR | 48 | 2e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5167 | OMPADOMAIN | 56 | 2e-11 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 41 | BBta_5219 | BBta_5242 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5219 | 2 | 14 | 1.423255 | hypothetical protein | |
| BBta_5220 | 2 | 17 | 1.123821 | hypothetical protein | |
| BBta_5221 | 3 | 15 | 0.352553 | carboxymethylenebutenolidase | |
| BBta_5222 | 3 | 17 | 0.609015 | hypothetical protein | |
| BBta_5223 | 3 | 17 | 0.451982 | hypothetical protein | |
| BBta_5224 | 1 | 16 | -0.217543 | hypothetical protein | |
| BBta_5225 | 1 | 13 | -1.796787 | hypothetical protein | |
| BBta_5226 | 0 | 11 | -1.084305 | hypothetical protein | |
| BBta_5227 | 0 | 11 | -0.233202 | hypothetical protein | |
| BBta_5228 | 0 | 12 | 0.827470 | hypothetical protein | |
| BBta_5230 | -1 | 13 | 0.793958 | hypothetical protein | |
| BBta_5231 | 1 | 10 | 2.384520 | serine O-acetyltransferase | |
| BBta_5233 | 1 | 11 | 3.135687 | hypothetical protein | |
| BBta_5234 | -1 | 11 | 3.191206 | hydrolase | |
| BBta_5235 | -2 | 11 | 2.399139 | hypothetical protein | |
| BBta_5236 | -2 | 13 | 0.717274 | hypothetical protein | |
| BBta_5237 | -1 | 14 | 0.431380 | salicylate 1-monooxygenase | |
| BBta_5238 | -1 | 17 | -1.294446 | hypothetical protein | |
| BBta_5240 | -1 | 19 | -2.296904 | *amidase | |
| BBta_5241 | 0 | 23 | -3.515672 | ABC transporter permease | |
| BBta_5242 | 1 | 25 | -3.320416 | ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5220 | RTXTOXIND | 29 | 0.013 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5223 | OUTRMMBRANEA | 26 | 0.032 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5224 | cloacin | 30 | 0.003 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 42 | BBta_5254 | BBta_5265 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5254 | 2 | 16 | 1.035572 | ABC transporter substrate-binding protein | |
| BBta_5255 | 4 | 16 | 1.684976 | carboxypeptidase | |
| BBta_5256 | 3 | 17 | 2.139153 | ABC transporter permease | |
| BBta_5257 | 3 | 16 | 2.371147 | ABC transporter permease | |
| BBta_5258 | 2 | 15 | 2.763732 | ABC transporter ATP-binding protein | |
| BBta_5259 | 1 | 14 | 2.394639 | hypothetical protein | |
| BBta_5260 | 0 | 13 | 1.719837 | amidohydrolase family protein | |
| BBta_5261 | -1 | 12 | 1.164571 | amidase | |
| BBta_5262 | 1 | 10 | 0.384686 | enoyl-CoA hydratase | |
| BBta_5263 | 2 | 10 | 0.507963 | oxidoreductase | |
| BBta_5264 | 3 | 11 | 0.209632 | hypothetical protein | |
| BBta_5265 | 2 | 12 | 0.374751 | glutathione transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5258 | HTHFIS | 33 | 0.004 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 43 | BBta_5363 | BBta_5381 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5363 | 2 | 12 | 2.519355 | hypothetical protein | |
| BBta_5364 | 1 | 11 | 1.981682 | amidohydrolase family protein | |
| BBta_5365 | 3 | 14 | 2.663689 | hypothetical protein | |
| BBta_5366 | 3 | 13 | 2.758774 | inner membrane transport protein | |
| BBta_5367 | 2 | 16 | 2.136388 | alcohol dehydrogenase | |
| BBta_5368 | 3 | 12 | 1.888524 | hypothetical protein | |
| BBta_5369 | 2 | 10 | 3.002026 | hypothetical protein | |
| BBta_5371 | 1 | 10 | 3.528270 | hypothetical protein | |
| BBta_5372 | 2 | 10 | 3.329284 | hypothetical protein | |
| BBta_5373 | 2 | 9 | 3.054688 | nuclease-like protein | |
| BBta_5374 | 2 | 8 | 3.438606 | D-alanyl-alanine synthetase A | |
| BBta_5375 | 3 | 9 | 3.394225 | HlyD family secretion protein | |
| BBta_5376 | 2 | 10 | 3.280973 | hypothetical protein | |
| BBta_5377 | 2 | 11 | 3.277619 | ABC transporter ATP-binding protein | |
| BBta_5378 | 3 | 12 | 3.964152 | hypothetical protein | |
| BBta_5379 | 4 | 12 | 3.758965 | esterase | |
| BBta_5380 | 1 | 15 | 2.751872 | hypothetical protein | |
| BBta_5381 | 1 | 14 | 3.114649 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5375 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5377 | PF05272 | 32 | 0.003 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 44 | BBta_5521 | BBta_5539 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5521 | 3 | 15 | -3.123594 | chemotactic signal-response protein CheL | |
| BBta_5522 | 6 | 16 | -2.706397 | hypothetical protein | |
| BBta_5524 | 5 | 15 | -3.424801 | hypothetical protein | |
| BBta_5525 | 7 | 17 | -2.962747 | hypothetical protein | |
| BBta_5526 | 5 | 15 | -1.430938 | flagellar biosynthesis regulatory protein FlaF | |
| BBta_5527 | 3 | 13 | -0.588458 | flagellin protein, C-terminus | |
| BBta_5528 | 2 | 13 | 0.665530 | flagellin protein, C-terminus | |
| BBta_5529 | 0 | 10 | 0.910226 | flagellar biosynthesis repressor FlbT | |
| BBta_5530 | 0 | 10 | 1.152887 | flagellin protein, C-terminus | |
| BBta_5531 | -1 | 9 | 1.153264 | pyridoxal-dependent decarboxylase | |
| BBta_5532 | 0 | 11 | 0.464428 | hypothetical protein | |
| BBta_5533 | 2 | 12 | 0.407533 | hypothetical protein | |
| BBta_5534 | 2 | 14 | 0.655850 | hypothetical protein | |
| BBta_5535 | 2 | 14 | 0.989066 | hypothetical protein | |
| BBta_5536 | 2 | 14 | 0.919585 | flagellar hook-associated protein FlgK | |
| BBta_5537 | 1 | 14 | 1.694573 | flagellar hook protein flgE | |
| BBta_5538 | 0 | 13 | 3.156502 | methionine sulfoxide reductase B | |
| BBta_5539 | 1 | 13 | 3.371396 | FAD dependent oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5521 | FLGFLGJ | 35 | 3e-05 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5527 | FLAGELLIN | 56 | 2e-10 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5528 | FLAGELLIN | 55 | 3e-10 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5530 | FLAGELLIN | 57 | 7e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5536 | FLGHOOKAP1 | 99 | 5e-24 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5537 | FLGHOOKAP1 | 38 | 1e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 45 | BBta_5623 | BBta_5630 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5623 | -2 | 16 | -3.675453 | hypothetical protein | |
| BBta_5624 | -1 | 19 | -4.015532 | asparagine synthetase | |
| BBta_5625 | 1 | 21 | -5.509680 | hypothetical protein | |
| BBta_5626 | 1 | 19 | -5.047612 | hydrolase domain-containing protein | |
| BBta_5627 | 1 | 17 | -4.682887 | hypothetical protein | |
| BBta_5628 | 1 | 14 | -4.614941 | alginate O-acetyltransferase | |
| BBta_5629 | 1 | 13 | -3.730070 | hypothetical protein | |
| BBta_5630 | 1 | 11 | -3.384727 | hypothetical protein |
| 46 | BBta_5738 | BBta_5798 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5738 | -1 | 13 | -3.006793 | acylglycerophosphoethanolamine acyltransferase | |
| BBta_5739 | -1 | 22 | -5.601445 | hypothetical protein | |
| BBta_5740 | -1 | 21 | -5.603538 | dimethyl sulfoxide reductase | |
| BBta_5741 | -1 | 21 | -6.089735 | GntR family transcriptional regulator | |
| BBta_5742 | -1 | 21 | -6.194168 | TRAP dicarboxylate family transporter subunit | |
| BBta_5743 | -1 | 26 | -5.300854 | TRAP C4-dicarboxylate transport system subunit | |
| BBta_5744 | -1 | 26 | -5.174028 | TRAP-type C4-dicarboxylate transport system | |
| BBta_5745 | 1 | 30 | -4.791542 | transcriptional regulator | |
| BBta_5746 | 1 | 33 | -4.807652 | Crp/FNR family transcriptional regulator | |
| BBta_5747 | 0 | 31 | -4.265183 | hypothetical protein | |
| BBta_5748 | 1 | 28 | -4.002790 | ABC transporter substrate-binding protein | |
| BBta_5749 | 0 | 28 | -3.624250 | ABC transporter ATP-binding protein | |
| BBta_5750 | -1 | 27 | -3.495379 | ABC transporter permease | |
| BBta_5751 | -1 | 25 | -3.483048 | hypothetical protein | |
| BBta_5752 | 0 | 25 | -3.703075 | hypothetical protein | |
| BBta_5753 | 1 | 25 | -3.848236 | hypothetical protein | |
| BBta_5755 | 0 | 24 | -3.441275 | alcohol dehydrogenase | |
| BBta_5756 | 0 | 22 | -3.702544 | hypothetical protein | |
| BBta_5757 | 1 | 22 | -3.892624 | poly-beta-hydroxybutyrate polymerase | |
| BBta_5758 | 1 | 22 | -3.805438 | hypothetical protein | |
| BBta_5760 | 1 | 22 | -3.301564 | hypothetical protein | |
| BBta_5761 | 0 | 24 | -2.363410 | formyl-coenzyme A transferase | |
| BBta_5762 | 0 | 33 | -5.064040 | acyl-CoA N-acyltransferases (Nat) | |
| BBta_5763 | 1 | 33 | -4.217199 | hypothetical protein | |
| BBta_5764 | 0 | 29 | -2.356556 | hypothetical protein | |
| BBta_5765 | 1 | 26 | -1.538132 | hypothetical protein | |
| BBta_5766 | 2 | 30 | -3.163127 | hypothetical protein | |
| BBta_5767 | 2 | 30 | -3.362442 | phage tail Collar domain | |
| BBta_5770 | 2 | 24 | -1.790252 | hypothetical protein | |
| BBta_5771 | -1 | 21 | -2.336913 | hypothetical protein | |
| BBta_5772 | 0 | 26 | -3.176515 | hypothetical protein | |
| BBta_5774 | 1 | 30 | -2.967127 | hypothetical protein | |
| BBta_5775 | 1 | 25 | -1.456349 | hypothetical protein | |
| BBta_5776 | 0 | 22 | -1.613207 | hypothetical protein | |
| BBta_5777 | 0 | 22 | -1.974245 | hypothetical protein | |
| BBta_5778 | 1 | 27 | -1.630553 | hypothetical protein | |
| BBta_5779 | 2 | 23 | -1.439094 | hypothetical protein | |
| BBta_5780 | 3 | 14 | -2.263441 | hypothetical protein | |
| BBta_5781 | 2 | 17 | -2.908220 | hypothetical protein | |
| BBta_5782 | 1 | 18 | -3.738196 | hypothetical protein | |
| BBta_5783 | 2 | 25 | -4.418123 | hypothetical protein | |
| BBta_5784 | 2 | 26 | -5.035155 | hypothetical protein | |
| BBta_5785 | 2 | 25 | -5.089152 | phage major head protein | |
| BBta_5786 | -1 | 24 | -4.176418 | hypothetical protein | |
| BBta_5787 | -1 | 25 | -3.779694 | hypothetical protein | |
| BBta_5788 | -1 | 26 | -3.586116 | hypothetical protein | |
| BBta_5789 | -2 | 21 | -2.651521 | hypothetical protein | |
| BBta_5790 | -2 | 19 | -1.445714 | hypothetical protein | |
| BBta_5791 | 0 | 23 | -2.070219 | hypothetical protein | |
| BBta_5792 | 5 | 33 | -4.371762 | hypothetical protein | |
| BBta_5793 | 3 | 32 | -4.666333 | hypothetical protein | |
| BBta_5794 | 3 | 34 | -3.990625 | hypothetical protein | |
| BBta_5796 | 3 | 35 | -4.914006 | hypothetical protein | |
| BBta_5797 | 4 | 41 | -5.239370 | hypothetical protein | |
| BBta_5798 | 2 | 28 | -3.544716 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5738 | TCRTETA | 34 | 0.004 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5743 | ACRIFLAVINRP | 29 | 0.011 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5748 | BINARYTOXINB | 31 | 0.009 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5753 | SACTRNSFRASE | 34 | 0.001 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5779 | cloacin | 35 | 3e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5780 | TCRTETA | 29 | 0.008 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 47 | BBta_5811 | BBta_5847 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5811 | 0 | 20 | -3.601727 | arginase | |
| BBta_5813 | 2 | 25 | -4.384517 | hypothetical protein | |
| BBta_5814 | 1 | 23 | -1.996349 | hypothetical protein | |
| BBta_5815 | -2 | 21 | -2.838190 | hypothetical protein | |
| BBta_5816 | -2 | 18 | -2.692179 | cytochrome C-552 | |
| BBta_5817 | -1 | 19 | -3.049989 | hypothetical protein | |
| BBta_5818 | -3 | 18 | -2.789076 | hypothetical protein | |
| BBta_5819 | -2 | 17 | -2.809879 | transcriptional regulator | |
| BBta_5820 | -2 | 21 | -4.090946 | hypothetical protein | |
| BBta_5821 | 0 | 21 | -3.586023 | major facilitator superfamily permease | |
| BBta_5822 | 1 | 16 | -2.761860 | hypothetical protein | |
| BBta_5823 | 1 | 16 | -2.443220 | hypothetical protein | |
| BBta_5824 | 1 | 16 | -2.522065 | hypothetical protein | |
| BBta_5825 | 1 | 15 | -2.190601 | hypothetical protein | |
| BBta_5826 | 1 | 15 | -1.719324 | hypothetical protein | |
| BBta_5827 | 2 | 15 | -1.281913 | protective surface antigen | |
| BBta_5828 | 1 | 22 | -1.415625 | hypothetical protein | |
| BBta_5829 | 1 | 18 | -0.977448 | hypothetical protein | |
| BBta_5830 | 2 | 17 | -0.918763 | hypothetical protein | |
| BBta_5831 | 0 | 17 | -1.341199 | hypothetical protein | |
| BBta_5832 | -1 | 15 | -1.945806 | LexA repressor | |
| BBta_5833 | -1 | 20 | -1.927575 | hypothetical protein | |
| BBta_5834 | -1 | 18 | -1.809091 | quinone oxidoreductase | |
| BBta_5835 | 2 | 22 | -1.428369 | hypothetical protein | |
| BBta_5837 | 2 | 15 | -0.201950 | quaternary ammonium compound-resistance protein | |
| BBta_5838 | 2 | 15 | -0.017146 | hypothetical protein | |
| BBta_5839 | 5 | 13 | 0.850788 | hypothetical protein | |
| BBta_5840 | 4 | 14 | 0.457122 | hypothetical protein | |
| BBta_5841 | 2 | 13 | 1.013656 | ATP-binding component, PhnN protein | |
| BBta_5842 | 1 | 14 | 1.050675 | metal-dependent hydrolase | |
| BBta_5843 | 1 | 17 | 0.770093 | phosphonate ABC transporter ATP-binding protein, | |
| BBta_5844 | 1 | 15 | 1.645445 | phosphonate C-P lyase system protein PhnK | |
| BBta_5845 | 1 | 15 | 1.207833 | phosphonate metabolism protein PhnJ | |
| BBta_5846 | 3 | 17 | 1.852931 | phosphonate metabolism protein PhnI | |
| BBta_5847 | 2 | 16 | 1.343302 | carbon-phosphorus lyase complex subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5821 | TCRTETB | 40 | 2e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5843 | PF05272 | 30 | 0.010 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 48 | BBta_5957 | BBta_5967 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5957 | -1 | 26 | -3.581747 | ABC transporter ATP-binding protein | |
| BBta_5958 | 4 | 33 | -6.182368 | hypothetical protein | |
| BBta_5959 | 6 | 18 | -4.438878 | hypothetical protein | |
| BBta_5960 | 6 | 18 | -4.402440 | hypothetical protein | |
| BBta_5961 | 2 | 18 | -4.190527 | coenzyme PQQ synthesis protein PqqA | |
| BBta_5962 | 1 | 19 | -4.593631 | hypothetical protein | |
| BBta_5963 | 2 | 14 | -3.988006 | hypothetical protein | |
| BBta_5964 | 2 | 13 | -3.958614 | quinoprotein ethanol dehydrogenase | |
| BBta_5965 | 1 | 15 | -4.020216 | cytochrome C | |
| BBta_5966 | 1 | 14 | -3.767314 | ABC transporter substrate-binding protein | |
| BBta_5967 | 3 | 13 | -3.536045 | AraC family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5957 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 49 | BBta_5980 | BBta_5986 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5980 | 2 | 12 | 1.787812 | fumarylacetoacetate hydrolase family protein | |
| BBta_5981 | 4 | 12 | 2.823780 | ABC transporter substrate-binding protein | |
| BBta_5982 | 5 | 16 | 3.484618 | GntR family transcriptional regulator | |
| BBta_5983 | 4 | 18 | 3.119834 | ABC transporter ATP-binding protein | |
| BBta_5984 | 3 | 15 | 2.748621 | ABC transporter permease | |
| BBta_5985 | 2 | 14 | 2.509742 | ABC transporter permease | |
| BBta_5986 | 2 | 13 | 2.073908 | fumarate reductase/succinate dehydrogenase |
| 50 | BBta_6047 | BBta_6053 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6047 | 2 | 12 | 1.992728 | alpha/beta family hydrolase | |
| BBta_6048 | 2 | 10 | 1.482283 | hypothetical protein | |
| BBta_6049 | 2 | 11 | 1.493789 | beta-lactamase | |
| BBta_6050 | 3 | 12 | 1.583760 | sensor histidine kinase | |
| BBta_6052 | 3 | 11 | 0.939978 | TonB-dependent siderophore receptor | |
| BBta_6053 | 4 | 12 | 1.028294 | hypothetical protein |
| 51 | BBta_6349 | BBta_6368 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6349 | 2 | 13 | 0.280938 | molybdopterin-guanine dinucleotide biosynthesis | |
| BBta_6350 | 2 | 13 | -0.404996 | cation efflux transporter | |
| BBta_6351 | 2 | 14 | -0.880419 | branched-chain amino acid ABC transporter | |
| BBta_6352 | 3 | 16 | -1.428932 | hypothetical protein | |
| BBta_6353 | 3 | 21 | -2.625477 | *P4-like integrase | |
| BBta_6354 | 3 | 23 | -2.785833 | formate dehydrogenase subunit alpha | |
| BBta_6355 | 3 | 30 | -6.440220 | phosphonate ABC transporter ATP-binding protein | |
| BBta_6356 | 4 | 32 | -6.009080 | phosphonate ABC transporter permease | |
| BBta_6357 | 5 | 35 | -6.435429 | phosphate/phosphonate ABC transporter | |
| BBta_6358 | 6 | 39 | -6.004324 | sulfonate ABC transporter substrate-binding | |
| BBta_6359 | 5 | 36 | -4.679721 | nitrate ABC transporter ATP-binding protein | |
| BBta_6360 | 4 | 31 | -3.818887 | sulfonate ABC transporter permease | |
| BBta_6361 | 4 | 27 | -3.355894 | transposase | |
| BBta_6362 | 6 | 29 | -3.918763 | hypothetical protein | |
| BBta_6363 | 6 | 29 | -4.097317 | transposase | |
| BBta_6364 | 6 | 29 | -4.837214 | phosphonate ABC transporter ATP-binding protein | |
| BBta_6365 | 6 | 31 | -5.126156 | phosphonate ABC transporter permease | |
| BBta_6366 | 3 | 20 | -3.053587 | phosphate/phosphonate ABC transporter | |
| BBta_6367 | 2 | 19 | -2.664508 | hypothetical protein | |
| BBta_6368 | 2 | 19 | -2.509822 | dioxygenase |
| 52 | BBta_6436 | BBta_6449 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6436 | 1 | 11 | 3.029074 | bacteriochlorophyllide reductase subunit | |
| BBta_6437 | 2 | 10 | 2.835714 | bacteriochlorophyllide reductase subunit | |
| BBta_6438 | 3 | 11 | 3.449311 | 2-desacetyl-2-hydroxyethyl | |
| BBta_6439 | 4 | 10 | 3.696428 | hydroxyneurosporene-O-methyltransferase | |
| BBta_6440 | 2 | 9 | 3.036523 | farnesyl-diphosphate synthase | |
| BBta_6441 | 2 | 9 | 2.775708 | hydroxyneurosporene and rhodopin dehydrogenase | |
| BBta_6442 | 1 | 10 | 2.021909 | hydroxyneurosporene synthase | |
| BBta_6443 | 3 | 11 | 3.098533 | hypothetical protein | |
| BBta_6444 | 3 | 11 | 3.041727 | phytoene synthase | |
| BBta_6445 | 3 | 12 | 2.548698 | phytoene dehydrogenase | |
| BBta_6446 | 3 | 11 | 2.876899 | alpha/beta hydrolase protoporphyrin IX magnesium | |
| BBta_6447 | 2 | 11 | 2.714674 | alpha/beta hydrolase | |
| BBta_6448 | 3 | 12 | 2.947164 | magnesium chelatase subunit D | |
| BBta_6449 | 3 | 11 | 2.114689 | protoporphyrin IX magnesium-chelatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6449 | HTHFIS | 35 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 53 | BBta_6508 | BBta_6516 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6508 | 2 | 12 | 1.717267 | endoribonuclease L-PSP | |
| BBta_6509 | 2 | 13 | 1.618428 | gamma-glutamyltranspeptidase | |
| BBta_6510 | 3 | 11 | 0.878448 | hydrolase | |
| BBta_6511 | 3 | 10 | 0.706381 | tryptophan 2,3-dioxygenase | |
| BBta_6512 | 4 | 10 | 1.952140 | kynureninase | |
| BBta_6513 | 3 | 11 | 2.604149 | hypothetical protein | |
| BBta_6514 | 3 | 11 | 2.221689 | TRAP-type transporter domain-containing protein | |
| BBta_6515 | 4 | 13 | 2.805479 | major facilitator superfamily permease | |
| BBta_6516 | 2 | 14 | 2.932424 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6515 | TCRTETB | 35 | 4e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 54 | BBta_6560 | BBta_6631 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6560 | 2 | 13 | 2.950656 | hypothetical protein | |
| BBta_6561 | 4 | 14 | 3.033940 | CysQ protein | |
| BBta_6562 | 5 | 15 | 1.737040 | hypothetical protein | |
| BBta_6564 | 5 | 17 | 1.907670 | hypothetical protein | |
| BBta_6565 | 6 | 18 | 0.581004 | hypothetical protein | |
| BBta_6567 | 9 | 25 | -1.256451 | *hypothetical protein | |
| BBta_6568 | 8 | 24 | -1.343608 | hypothetical protein | |
| BBta_6569 | 8 | 25 | -1.378385 | hypothetical protein | |
| BBta_6571 | 9 | 27 | -0.714451 | hypothetical protein | |
| BBta_6573 | 9 | 29 | -0.748427 | hypothetical protein | |
| BBta_6574 | 10 | 33 | -0.951085 | hypothetical protein | |
| BBta_6575 | 11 | 31 | -0.820093 | hypothetical protein | |
| BBta_6576 | 12 | 28 | -1.507117 | hypothetical protein | |
| BBta_6577 | 11 | 29 | -1.653052 | hypothetical protein | |
| BBta_6578 | 11 | 29 | -1.404874 | hypothetical protein | |
| BBta_6579 | 12 | 28 | -2.005215 | hypothetical protein | |
| BBta_6580 | 12 | 27 | -2.133934 | hypothetical protein | |
| BBta_6581 | 11 | 26 | -1.875783 | hypothetical protein | |
| BBta_6582 | 10 | 28 | -0.818432 | hypothetical protein | |
| BBta_6583 | 11 | 25 | -1.374967 | bacteriophage protein | |
| BBta_6584 | 10 | 24 | -2.014168 | bacteriophage protein, GP46-like protein | |
| BBta_6585 | 10 | 24 | -2.145503 | bacteriophage protein, gp45-like protein | |
| BBta_6586 | 10 | 21 | -1.757804 | Mu-like prophage tail protein | |
| BBta_6587 | 10 | 22 | -1.440674 | Mu-like prophage DNA circulation protein | |
| BBta_6588 | 10 | 22 | -2.027120 | hypothetical protein | |
| BBta_6590 | 10 | 23 | -0.869603 | hypothetical protein | |
| BBta_6591 | 10 | 22 | -0.898666 | hypothetical protein | |
| BBta_6592 | 8 | 20 | -0.076860 | Mu-like prophage FluMu tail sheath protein | |
| BBta_6593 | 7 | 19 | -0.435871 | hypothetical protein | |
| BBta_6594 | 6 | 19 | -0.922256 | hypothetical protein | |
| BBta_6595 | 6 | 18 | -1.157912 | hypothetical protein | |
| BBta_6596 | 8 | 21 | -1.579332 | hypothetical protein | |
| BBta_6597 | 8 | 21 | -1.282297 | peptidase S14, ClpP | |
| BBta_6598 | 9 | 23 | -1.896654 | lambda family phage portal protein | |
| BBta_6599 | 9 | 26 | -1.499316 | hypothetical protein | |
| BBta_6600 | 10 | 27 | -0.950233 | hypothetical protein | |
| BBta_6601 | 9 | 24 | -0.920783 | phage terminase large subunit | |
| BBta_6602 | 8 | 24 | -0.353907 | hypothetical protein | |
| BBta_6603 | 8 | 25 | -0.475090 | hypothetical protein | |
| BBta_6604 | 8 | 24 | -0.163525 | hypothetical protein | |
| BBta_6605 | 8 | 24 | -0.447436 | hypothetical protein | |
| BBta_6606 | 7 | 23 | -0.473042 | phage / plasmid primase P4 | |
| BBta_6607 | 8 | 24 | 0.081174 | DNA primase | |
| BBta_6608 | 7 | 23 | -0.527639 | hypothetical protein | |
| BBta_6609 | 7 | 23 | -0.747998 | hypothetical protein | |
| BBta_6610 | 9 | 25 | -0.596812 | hypothetical protein | |
| BBta_6611 | 9 | 23 | 0.275682 | adenine-specific DNA-methyltransferase | |
| BBta_6612 | 11 | 26 | 1.217313 | hypothetical protein | |
| BBta_6613 | 11 | 26 | -0.812830 | single-stranded DNA-binding protein | |
| BBta_6614 | 10 | 26 | 0.359827 | hypothetical protein | |
| BBta_6615 | 10 | 26 | 0.180561 | hypothetical protein | |
| BBta_6616 | 11 | 28 | -1.106209 | hypothetical protein | |
| BBta_6617 | 8 | 28 | -2.049387 | hypothetical protein | |
| BBta_6618 | 8 | 28 | -3.243552 | hypothetical protein | |
| BBta_6619 | 8 | 30 | -1.010733 | hypothetical protein | |
| BBta_6620 | 8 | 32 | -2.207978 | hypothetical protein | |
| BBta_6621 | 5 | 30 | -3.846615 | hypothetical protein | |
| BBta_6622 | 4 | 31 | -3.418160 | hypothetical protein | |
| BBta_6623 | 6 | 32 | -3.991967 | hypothetical protein | |
| BBta_6624 | 7 | 34 | -4.643510 | hypothetical protein | |
| BBta_6625 | 7 | 33 | -4.694015 | hypothetical protein | |
| BBta_6626 | 9 | 38 | -6.993083 | prophage integrase | |
| BBta_6627 | 8 | 38 | -6.765254 | hypothetical protein | |
| BBta_6628 | 4 | 33 | -6.077833 | hypothetical protein | |
| BBta_6629 | 3 | 21 | -4.280456 | phage-related transcriptional regulator | |
| BBta_6630 | 2 | 15 | -3.542219 | hypothetical protein | |
| BBta_6631 | 0 | 11 | -3.358576 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6564 | GPOSANCHOR | 33 | 6e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6565 | GPOSANCHOR | 46 | 2e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6579 | PF07201 | 29 | 0.034 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6587 | RTXTOXINA | 30 | 0.034 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6597 | adhesinmafb | 35 | 8e-04 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6601 | FLGFLIH | 29 | 0.035 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6624 | BCTERIALGSPD | 27 | 0.011 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| 55 | BBta_6701 | BBta_6709 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6701 | 3 | 10 | 2.602094 | diguanylate cyclase | |
| BBta_6702 | 4 | 11 | 2.741314 | cobalamin synthesis protein cobW | |
| BBta_6703 | 3 | 8 | 2.760183 | D-glutamate deacylase | |
| BBta_6704 | 3 | 8 | 3.446989 | gamma-glutamyltranspeptidase | |
| BBta_6705 | 3 | 8 | 2.787781 | choline dehydrogenase | |
| BBta_6706 | 3 | 9 | 2.586501 | hypothetical protein | |
| BBta_6707 | 2 | 10 | 2.290599 | diguanylate cyclase | |
| BBta_6708 | 2 | 11 | 2.085018 | glucose 1-dehydrogenase | |
| BBta_6709 | 3 | 12 | 2.094885 | xylulose kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6703 | UREASE | 39 | 5e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6708 | DHBDHDRGNASE | 125 | 1e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 56 | BBta_6734 | BBta_6777 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6734 | 2 | 10 | -0.384431 | methyl-accepting chemotaxis receptor | |
| BBta_6735 | 2 | 11 | -0.880297 | methyl-accepting chemotaxis receptor | |
| BBta_6736 | 1 | 17 | -2.492063 | CheW protein | |
| BBta_6737 | 2 | 27 | -4.882119 | chemotaxis protein CheA | |
| BBta_6738 | 6 | 44 | -8.924450 | response regulator receiver, CheY1 | |
| BBta_6741 | 8 | 45 | -8.398648 | transcriptional regulator | |
| BBta_6743 | 9 | 46 | -7.977012 | hypothetical protein | |
| BBta_6744 | 9 | 43 | -7.639193 | phage integrase | |
| BBta_6745 | 10 | 40 | -6.842878 | hypothetical protein | |
| BBta_6746 | 10 | 36 | -4.511556 | hypothetical protein | |
| BBta_6747 | 13 | 36 | -3.591374 | resolvase | |
| BBta_6749 | 12 | 38 | -3.852851 | hypothetical protein | |
| BBta_6750 | 12 | 36 | -4.060528 | hypothetical protein | |
| BBta_6751 | 13 | 36 | -3.810807 | hypothetical protein | |
| BBta_6752 | 12 | 36 | -3.885934 | hypothetical protein | |
| BBta_6754 | 9 | 28 | -2.333156 | hypothetical protein | |
| BBta_6755 | 5 | 19 | -0.723879 | hypothetical protein | |
| BBta_6756 | 4 | 17 | -0.296891 | hypothetical protein | |
| BBta_6757 | 2 | 14 | 0.019211 | lambda integrase-like/ DNA breaking-rejoining | |
| BBta_6758 | -1 | 12 | 1.188603 | *hypothetical protein | |
| BBta_6759 | -2 | 13 | 1.164571 | ribosomal large subunit pseudouridine synthase | |
| BBta_6760 | -2 | 11 | 0.650621 | RNA polymerase factor sigma-32 | |
| BBta_6761 | 0 | 11 | 1.193085 | hypothetical protein | |
| BBta_6762 | 0 | 12 | 0.732372 | diguanylate cyclase | |
| BBta_6763 | 2 | 14 | 1.332243 | hypothetical protein | |
| BBta_6764 | 3 | 14 | 1.884445 | two-component response regulator | |
| BBta_6766 | 2 | 14 | 1.986056 | short-chain dehydrogenase | |
| BBta_6767 | -2 | 13 | 1.554891 | hypothetical protein | |
| BBta_6768 | 1 | 14 | 0.750294 | hypothetical protein | |
| BBta_6769 | 7 | 33 | -8.191806 | hypothetical protein | |
| BBta_6770 | 7 | 23 | -6.772656 | hypothetical protein | |
| BBta_6771 | 6 | 18 | -4.764283 | hypothetical protein | |
| BBta_6772 | 6 | 17 | -4.747289 | hypothetical protein | |
| BBta_6773 | 5 | 15 | -4.435608 | hypothetical protein | |
| BBta_6774 | 4 | 16 | -4.122319 | molecular chaperone | |
| BBta_6775 | -2 | 12 | 1.376043 | RNA polymerase sigma factor RpoD | |
| BBta_6776 | 0 | 12 | 2.325078 | DNA primase | |
| BBta_6777 | 2 | 13 | 2.001296 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6737 | PF06580 | 39 | 5e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6738 | HTHFIS | 85 | 8e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6746 | V8PROTEASE | 35 | 3e-04 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6764 | HTHFIS | 58 | 6e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6766 | DHBDHDRGNASE | 82 | 2e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 57 | BBta_6804 | BBta_6813 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6804 | -1 | 22 | -3.237484 | LysR family transcriptional regulator | |
| BBta_6805 | -1 | 27 | -3.981836 | dihydrodipicolinate synthase | |
| BBta_6806 | 1 | 33 | -1.749876 | hypothetical protein | |
| BBta_6807 | 2 | 36 | 0.584668 | ATPase, ParA type | |
| BBta_6808 | 2 | 38 | 1.252339 | hypothetical protein | |
| BBta_6810 | 2 | 38 | 1.312428 | two-component regulatory protein | |
| BBta_6811 | 2 | 39 | 1.457957 | two component regulatory protein | |
| BBta_6812 | 2 | 38 | 1.462945 | arthrofactin synthetase/syringopeptin synthetase | |
| BBta_6813 | 2 | 36 | 1.863125 | arthrofactin synthetase/syringopeptin synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6810 | HTHFIS | 31 | 0.006 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 58 | BBta_6997 | BBta_7007 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6997 | 2 | 25 | -2.584051 | hypothetical protein | |
| BBta_6998 | 3 | 25 | -2.627412 | hypothetical protein | |
| BBta_6999 | 0 | 20 | -2.148682 | hypothetical protein | |
| BBta_7000 | 0 | 18 | -2.408571 | hypothetical protein | |
| BBta_7001 | 0 | 18 | -1.793876 | two-component response regulator | |
| BBta_7002 | 1 | 16 | -1.286410 | hypothetical protein | |
| BBta_7003 | 0 | 14 | -1.250888 | ECF subfamily RNA polymerase sigma-24 factor | |
| BBta_7004 | 2 | 11 | -1.334100 | signal transduction histidine kinase | |
| BBta_7005 | 3 | 10 | -0.802715 | urease accessory protein UreG | |
| BBta_7006 | 2 | 10 | -0.452167 | urease accessory protein UreF | |
| BBta_7007 | 3 | 13 | -0.384575 | urease accessory protein UreE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7000 | PF03544 | 47 | 6e-09 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7001 | HTHFIS | 44 | 4e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7002 | BACSURFANTGN | 25 | 0.038 | Yersinia/Haemophilus virulence surface antigen sign... | |
>BACSURFANTGN#Yersinia/Haemophilus virulence surface antigen | |||||
| 59 | BBta_7156 | BBta_7170 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7156 | 2 | 7 | 1.929535 | hypothetical protein | |
| BBta_7157 | 1 | 10 | 1.565967 | ABC transporter ATP-binding protein | |
| BBta_7158 | 1 | 11 | 1.462190 | hypothetical protein | |
| BBta_7159 | 1 | 10 | 0.553987 | alpha/beta family hydrolase | |
| BBta_7160 | 0 | 11 | -0.495991 | hypothetical protein | |
| BBta_7161 | 1 | 13 | -0.899839 | hypothetical protein | |
| BBta_7164 | 0 | 13 | -0.553378 | peptidase M29, aminopeptidase II | |
| BBta_7165 | 1 | 15 | -0.119676 | hypothetical protein | |
| BBta_7166 | 2 | 13 | 0.662563 | hypothetical protein | |
| BBta_7167 | 3 | 9 | 1.397021 | glyoxylase | |
| BBta_7168 | 4 | 10 | 2.077522 | hypothetical protein | |
| BBta_7169 | 2 | 13 | 1.420325 | short chain dehydrogenase | |
| BBta_7170 | 2 | 14 | 0.945169 | peptide ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7169 | DHBDHDRGNASE | 42 | 9e-07 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7170 | HTHFIS | 30 | 0.011 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 60 | BBta_7244 | BBta_7319 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7244 | 2 | 18 | -2.587810 | flagellar basal-body rod modification protein | |
| BBta_7245 | 1 | 17 | -2.613087 | short-chain dehydrogenase | |
| BBta_7246 | 2 | 18 | -2.491801 | rhodanese-related sulfurtransferase | |
| BBta_7247 | 3 | 17 | -3.170520 | ABC transporter permease | |
| BBta_7248 | 5 | 18 | -3.420147 | ABC transporter ATP-binding protein | |
| BBta_7249 | 5 | 23 | -4.678028 | monooxygenase | |
| BBta_7250 | 6 | 31 | -5.771846 | nitrate/sulfonate/bicarbonate ABC transporter | |
| BBta_7251 | 8 | 39 | -6.672420 | 3-mercaptopyruvate sulfurtransferase | |
| BBta_7252 | 11 | 46 | -9.277196 | transposase | |
| BBta_7253 | 10 | 48 | -8.678275 | hypothetical protein | |
| BBta_7254 | 6 | 37 | -5.883048 | flagellar basal-body rod protein flgF | |
| BBta_7255 | 5 | 32 | -5.418708 | hypothetical protein | |
| BBta_7256 | 5 | 32 | -5.347057 | hypothetical protein | |
| BBta_7257 | 5 | 31 | -5.374399 | hypothetical protein | |
| BBta_7258 | 5 | 27 | -5.028581 | MgtC family protein | |
| BBta_7259 | 5 | 27 | -5.131423 | lead, cadmium, zinc and mercury-transporting | |
| BBta_7260 | 5 | 27 | -6.148599 | opgC protein | |
| BBta_7261 | 5 | 29 | -5.853792 | hypothetical protein | |
| BBta_7262 | 5 | 29 | -5.753962 | hypothetical protein | |
| BBta_7263 | 5 | 29 | -5.739787 | RND divalent metal cation efflux transporter | |
| BBta_7264 | 4 | 35 | -7.004324 | nitrogen regulatory protein P-II | |
| BBta_7265 | 6 | 36 | -7.206228 | cobalt-zinc-cadmium resistance efflux pump CzcB | |
| BBta_7266 | 8 | 42 | -7.982716 | outer membrane cobalt-zinc-cadmium resistance | |
| BBta_7267 | 8 | 44 | -9.313629 | hypothetical protein | |
| BBta_7268 | 8 | 40 | -8.506025 | cation efflux system protein czcD | |
| BBta_7269 | 8 | 41 | -8.523358 | hypothetical protein | |
| BBta_7271 | 9 | 32 | -6.475987 | hypothetical protein | |
| BBta_7274 | 8 | 32 | -6.306694 | hypothetical protein | |
| BBta_7275 | 6 | 24 | -5.076205 | hypothetical protein | |
| BBta_7276 | 5 | 19 | -3.225545 | manganese transport protein | |
| BBta_7277 | 4 | 17 | -3.196109 | hypothetical protein | |
| BBta_7278 | 4 | 19 | -3.511941 | transposase | |
| BBta_7280 | 6 | 37 | -7.384361 | integral membrane protein | |
| BBta_7281 | 5 | 43 | -8.062362 | hypothetical protein | |
| BBta_7286 | 6 | 39 | -6.688312 | hypothetical protein | |
| BBta_7287 | 3 | 29 | -4.917680 | hypothetical protein | |
| BBta_7288 | 0 | 24 | -3.415975 | hypothetical protein | |
| BBta_7289 | 0 | 22 | -3.042837 | hypothetical protein | |
| BBta_7290 | -1 | 21 | -2.136083 | hypothetical protein | |
| BBta_7291 | -2 | 17 | -0.600064 | universal stress protein UspA | |
| BBta_7292 | -3 | 15 | -0.454325 | poly-beta-hydroxyalkanoate synthase | |
| BBta_7293 | -3 | 18 | -0.674919 | bifunctional enoyl-CoA hydratase/phosphate | |
| BBta_7294 | -1 | 21 | -1.243806 | acetate kinase | |
| BBta_7295 | 1 | 23 | -1.986944 | hypothetical protein | |
| BBta_7296 | 0 | 22 | -1.822927 | cadmium-exporting ATPase | |
| BBta_7297 | 3 | 32 | -4.137894 | hypothetical protein | |
| BBta_7300 | 4 | 30 | -4.447583 | transposase | |
| BBta_7301 | 5 | 30 | -4.409140 | hypothetical protein | |
| BBta_7302 | 5 | 27 | -4.615669 | hypothetical protein | |
| BBta_7303 | 4 | 24 | -3.604767 | hypothetical protein | |
| BBta_7304 | 3 | 26 | -4.111722 | hypothetical protein | |
| BBta_7305 | 2 | 25 | -4.024523 | hypothetical protein | |
| BBta_7306 | 0 | 21 | -2.620972 | hypothetical protein | |
| BBta_7309 | -1 | 19 | -1.934818 | hypothetical protein | |
| BBta_7310 | -2 | 21 | -1.893412 | ParB-like nuclease | |
| BBta_7311 | -2 | 22 | -2.409087 | hypothetical protein | |
| BBta_7312 | -1 | 23 | -1.010620 | hypothetical protein | |
| BBta_7313 | -1 | 23 | -0.979749 | phage integrase family protein | |
| BBta_7314 | 0 | 24 | -1.117309 | hypothetical protein | |
| BBta_7315 | 2 | 25 | -1.315872 | transposase | |
| BBta_7316 | 4 | 27 | -1.885075 | ParB-like nuclease | |
| BBta_7317 | 2 | 22 | -1.097602 | ATP-dependent exoDNAse | |
| BBta_7318 | 3 | 23 | -2.482772 | hypothetical protein | |
| BBta_7319 | 2 | 21 | -2.003377 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7245 | DHBDHDRGNASE | 117 | 8e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7254 | FLGHOOKAP1 | 29 | 0.016 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7263 | ACRIFLAVINRP | 760 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7268 | SECYTRNLCASE | 28 | 0.049 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7271 | cloacin | 32 | 3e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7275 | SYCDCHAPRONE | 50 | 2e-09 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7294 | ACETATEKNASE | 395 | e-138 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| 61 | BBta_7384 | BBta_7396 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7384 | 2 | 17 | -1.177444 | hypothetical protein | |
| BBta_7385 | 2 | 16 | -0.890087 | hypothetical protein | |
| BBta_7386 | 0 | 17 | -1.234557 | SARP family transcriptional regulator | |
| BBta_7387 | 1 | 22 | -2.907140 | DNA repair protein RadC | |
| BBta_7388 | 1 | 25 | -3.365264 | integrase | |
| BBta_7389 | 1 | 23 | -2.381529 | hypothetical protein | |
| BBta_7390 | 0 | 22 | -1.949263 | DNA binding protein | |
| BBta_7391 | 1 | 23 | -2.421821 | hypothetical protein | |
| BBta_7392 | 0 | 25 | -3.112799 | hypothetical protein | |
| BBta_7393 | 0 | 21 | -3.455434 | hypothetical protein | |
| BBta_7394 | 0 | 19 | -2.650458 | ardC antirestriction protein | |
| BBta_7395 | -1 | 19 | -3.546281 | hypothetical protein | |
| BBta_7396 | 0 | 19 | -3.255561 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7393 | FLGMOTORFLIM | 29 | 0.007 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| 62 | BBta_7409 | BBta_7438 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7409 | 2 | 18 | -0.040099 | hypothetical protein | |
| BBta_7410 | 1 | 17 | 0.088000 | hypothetical protein | |
| BBta_7411 | 1 | 17 | -0.407009 | hypothetical protein | |
| BBta_7412 | 1 | 16 | -0.243519 | hypothetical protein | |
| BBta_7413 | 1 | 16 | -0.445242 | methylase/helicase | |
| BBta_7414 | 1 | 18 | -1.496566 | hypothetical protein | |
| BBta_7415 | 2 | 21 | -2.450112 | hypothetical protein | |
| BBta_7416 | 2 | 26 | -2.866140 | hypothetical protein | |
| BBta_7418 | 1 | 26 | -2.460540 | hypothetical protein | |
| BBta_7420 | 2 | 29 | -3.236242 | hypothetical protein | |
| BBta_7421 | 2 | 32 | -3.211593 | lead, cadmium, zinc and mercury-transporting | |
| BBta_7423 | 1 | 41 | -4.712622 | hypothetical protein | |
| BBta_7424 | 2 | 43 | -3.623391 | hypothetical protein | |
| BBta_7425 | 4 | 41 | -3.279874 | response regulator receiver | |
| BBta_7426 | 5 | 37 | -2.807983 | response regulator | |
| BBta_7427 | 4 | 34 | -0.989174 | hypothetical protein | |
| BBta_7428 | 3 | 33 | -0.572565 | hypothetical protein | |
| BBta_7429 | 5 | 33 | -0.727981 | hypothetical protein | |
| BBta_7430 | 3 | 31 | -0.393062 | hypothetical protein | |
| BBta_7431 | 2 | 29 | -0.530345 | replication protein A | |
| BBta_7432 | 2 | 25 | 0.739641 | partition protein | |
| BBta_7433 | 3 | 22 | -0.788834 | hypothetical protein | |
| BBta_7434 | 3 | 23 | -0.969734 | hypothetical protein | |
| BBta_7435 | 2 | 20 | -0.001044 | conjugal transfer protein | |
| BBta_7436 | 3 | 20 | -0.066915 | soluble lytic murein transglycosylase | |
| BBta_7437 | 2 | 19 | 0.073981 | hypothetical protein | |
| BBta_7438 | 2 | 16 | -0.344152 | conjugal transfer coupling protein TraG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7409 | PHPHTRNFRASE | 31 | 0.016 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7414 | PF05272 | 31 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7425 | HTHFIS | 66 | 1e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7426 | HTHFIS | 59 | 2e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 63 | BBta_7448 | BBta_7466 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7448 | 3 | 26 | -2.922937 | conjugal transfer protein TrbG | |
| BBta_7449 | 3 | 27 | -3.538987 | conjugal transfer protein TrbI | |
| BBta_7450 | 4 | 29 | -3.710613 | hypothetical protein | |
| BBta_7451 | 3 | 29 | -4.118737 | transcriptional regulator | |
| BBta_7452 | 3 | 28 | -4.487375 | Na+/phosphate symporter | |
| BBta_7453 | 4 | 28 | -5.124153 | OmpA-like transmembrane domain-containing | |
| BBta_7455 | 1 | 31 | -5.594186 | manganese transport transmembrane protein | |
| BBta_7457 | 2 | 37 | -6.421907 | hypothetical protein | |
| BBta_7458 | 3 | 38 | -6.451261 | sensor histidine kinase with ATP-binding region | |
| BBta_7459 | 3 | 39 | -6.765445 | nodulation protein W, two-component | |
| BBta_7460 | 3 | 39 | -6.640062 | hypothetical protein | |
| BBta_7462 | 3 | 32 | -4.840778 | ABC transporter permease | |
| BBta_7463 | 2 | 29 | -4.179559 | ABC transporter ATP-binding protein | |
| BBta_7465 | 1 | 25 | -3.597334 | hypothetical protein | |
| BBta_7466 | 0 | 21 | -3.803939 | hypothetical protein |
| 64 | BBta_7683 | BBta_7700 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7683 | 3 | 10 | -0.285317 | branched-chain amino acid ABC transporter | |
| BBta_7684 | -1 | 8 | -1.724892 | branched-chain amino acid ABC transporter | |
| BBta_7685 | -1 | 11 | -3.318671 | branched-chain amino acid ABC transporter | |
| BBta_7686 | -1 | 13 | -3.549234 | branched-chain amino acid ABC transporter | |
| BBta_7687 | 0 | 16 | -3.989589 | PAS/PAC sensor-containing diguanylate | |
| BBta_7688 | 4 | 23 | -5.088714 | hypothetical protein | |
| BBta_7689 | 4 | 24 | -4.984297 | *hypothetical protein | |
| BBta_7690 | 4 | 24 | -4.638173 | type II restriction enzyme, methylase subunit | |
| BBta_7691 | 4 | 19 | -2.311488 | integrase catalytic subunit | |
| BBta_7692 | 2 | 16 | -1.985982 | insertion element protein | |
| BBta_7693 | 2 | 17 | -1.460491 | ACP synthase | |
| BBta_7694 | 2 | 15 | -2.065973 | hypothetical protein | |
| BBta_7695 | 1 | 16 | -1.720297 | hypothetical protein | |
| BBta_7696 | 1 | 18 | -0.524180 | hypothetical protein | |
| BBta_7697 | 1 | 16 | 0.386458 | hypothetical protein | |
| BBta_7699 | 4 | 18 | 0.553968 | transcriptional regulator | |
| BBta_7700 | 3 | 18 | 0.591739 | hypothetical protein |
| 65 | BBta_7709 | BBta_7819 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7709 | 3 | 18 | -0.154557 | hypothetical protein | |
| BBta_7710 | 3 | 17 | 0.089302 | hypothetical protein | |
| BBta_7711 | 3 | 16 | 1.450694 | hypothetical protein | |
| BBta_7712 | 2 | 18 | 2.752644 | hypothetical protein | |
| BBta_7713 | 1 | 17 | 3.075853 | hypothetical protein | |
| BBta_7714 | 1 | 18 | 3.238462 | hypothetical protein | |
| BBta_7715 | 0 | 18 | 3.180645 | hypothetical protein | |
| BBta_7716 | 0 | 19 | 3.426767 | hypothetical protein | |
| BBta_7717 | 0 | 19 | 3.586394 | methylase/helicase | |
| BBta_7718 | -2 | 20 | 3.827564 | hypothetical protein | |
| BBta_7719 | 2 | 23 | 2.748364 | hypothetical protein | |
| BBta_7720 | 2 | 24 | 1.849837 | plasmid stability protein | |
| BBta_7721 | 1 | 26 | 1.751081 | plasmid stability protein | |
| BBta_7722 | 2 | 30 | 1.113130 | hypothetical protein | |
| BBta_7723 | 5 | 34 | 0.051507 | hypothetical protein | |
| BBta_7724 | 6 | 31 | 0.666232 | hypothetical protein | |
| BBta_7725 | 5 | 23 | 1.854226 | hypothetical protein | |
| BBta_7726 | 4 | 20 | 3.059389 | hypothetical protein | |
| BBta_7727 | 3 | 20 | 3.216448 | hypothetical protein | |
| BBta_7729 | 3 | 16 | 3.350363 | hypothetical protein | |
| BBta_7730 | 3 | 17 | 3.711315 | hypothetical protein | |
| BBta_7731 | 2 | 18 | 3.220232 | plasmid replication protein A | |
| BBta_7732 | 1 | 19 | 3.290838 | plasmid partition protein | |
| BBta_7733 | 2 | 20 | 3.789812 | hypothetical protein | |
| BBta_7734 | 2 | 17 | 2.881382 | hypothetical protein | |
| BBta_7735 | 3 | 17 | 2.946919 | conjugal transfer protein | |
| BBta_7736 | 2 | 18 | 3.205062 | hypothetical protein | |
| BBta_7737 | 2 | 17 | 3.006718 | soluble lytic murein transglycosylase | |
| BBta_7738 | 2 | 17 | 2.974000 | hypothetical protein | |
| BBta_7739 | 2 | 17 | 2.014683 | conjugal transfer coupling protein TraG | |
| BBta_7740 | 1 | 16 | 2.021609 | hypothetical protein | |
| BBta_7741 | 1 | 16 | 2.146052 | conjugal transfer protein TrbB | |
| BBta_7742 | 2 | 15 | 2.049066 | conjugal transfer protein TrbC | |
| BBta_7743 | 2 | 15 | 2.084564 | conjugal transfer protein TrbD | |
| BBta_7744 | 0 | 14 | 1.966668 | conjugal transfer ATPase TrbE | |
| BBta_7745 | -1 | 15 | 2.118041 | conjugal transfer protein TrbJ | |
| BBta_7746 | -1 | 16 | 2.184979 | hypothetical protein | |
| BBta_7747 | -1 | 14 | 1.337731 | conjugal transfer protein TrbL | |
| BBta_7748 | 2 | 16 | -0.238391 | conjugal transfer protein TrbF | |
| BBta_7749 | 1 | 19 | -0.630462 | conjugal transfer protein TrbG | |
| BBta_7750 | 3 | 20 | -1.585310 | conjugal transfer protein TrbI | |
| BBta_7751 | 5 | 29 | -3.895464 | hypothetical protein | |
| BBta_7752 | 5 | 39 | -6.304101 | insertion element ISR1-like protein | |
| BBta_7753 | 5 | 41 | -6.456870 | transposase | |
| BBta_7754 | 5 | 42 | -7.140541 | transposase | |
| BBta_7755 | 5 | 47 | -8.850720 | hypothetical protein | |
| BBta_7759 | 5 | 50 | -9.398062 | hypothetical protein | |
| BBta_7760 | 4 | 49 | -9.660724 | Acetyl-CoA synthetase | |
| BBta_7762 | 3 | 43 | -9.375499 | hypothetical protein | |
| BBta_7764 | 3 | 45 | -9.130660 | 3-ketoacyl-ACP reductase | |
| BBta_7765 | 3 | 49 | -9.061193 | osmotically inducible sensory protein | |
| BBta_7766 | 3 | 53 | -9.265366 | nitrogen fixation regulation protein fixK | |
| BBta_7767 | 4 | 54 | -9.558621 | nitrogen fixation regulation protein fixK | |
| BBta_7769 | 4 | 51 | -9.846761 | adenylate kinase | |
| BBta_7770 | 5 | 51 | -10.221568 | nitrogen fixation regulation protein fixK | |
| BBta_7774 | 5 | 52 | -10.602474 | hypothetical protein | |
| BBta_7776 | 4 | 52 | -10.744105 | hypothetical protein | |
| BBta_7777 | 4 | 49 | -11.077721 | NADPH-dependent FMN reductase | |
| BBta_7778 | 5 | 47 | -10.221036 | poly(3-hydroxyalkanoate) polymerase family | |
| BBta_7779 | 5 | 49 | -10.134864 | UspA protein | |
| BBta_7781 | 3 | 41 | -8.675528 | DNA ligase-like protein | |
| BBta_7782 | 4 | 37 | -8.055859 | ATP-dependent DNA ligase | |
| BBta_7783 | 4 | 36 | -7.970715 | osmotically-inducible protein Y | |
| BBta_7784 | 4 | 40 | -8.005518 | osmotically inducible protein Y | |
| BBta_7788 | 4 | 41 | -8.307401 | heat shock protein (HSP-70 cofactor), grpE | |
| BBta_7789 | 4 | 35 | -7.105033 | chaperone clpB | |
| BBta_7790 | 4 | 39 | -7.637898 | chaperone protein dnaK | |
| BBta_7791 | 4 | 41 | -7.802018 | hypothetical protein | |
| BBta_7792 | 4 | 40 | -7.379055 | glutathione-regulated potassium-efflux system | |
| BBta_7793 | 4 | 34 | -6.816933 | multiple antibiotic resistance (MarC)-like | |
| BBta_7794 | 2 | 32 | -6.725829 | DNA-binding ATP-dependent protease La | |
| BBta_7795 | 4 | 38 | -8.522553 | sigma 54 modulation protein/ribosomal protein | |
| BBta_7796 | 4 | 35 | -8.682466 | hypothetical protein | |
| BBta_7797 | 4 | 30 | -7.304010 | DNA protection during starvation protein | |
| BBta_7798 | 4 | 29 | -7.288588 | thioredoxin | |
| BBta_7799 | 6 | 29 | -6.471088 | hypothetical protein | |
| BBta_7800 | 7 | 30 | -6.383670 | hypothetical protein | |
| BBta_7801 | 9 | 30 | -5.800299 | hypothetical protein | |
| BBta_7802 | 8 | 29 | -5.000114 | cell division protein | |
| BBta_7803 | 9 | 33 | -5.202471 | hypothetical protein | |
| BBta_7804 | 8 | 30 | -4.435045 | heat shock protein- DnaJ-like protein | |
| BBta_7805 | 6 | 37 | -6.520980 | hypothetical protein | |
| BBta_7806 | 6 | 42 | -7.221054 | small heat-shock protein molecular chaperone | |
| BBta_7807 | 5 | 45 | -8.392404 | Hsp20 family heat-shock protein | |
| BBta_7808 | 5 | 47 | -8.742672 | Hsp20 family heat-shock protein | |
| BBta_7809 | 4 | 46 | -8.627596 | serine protease do-like | |
| BBta_7810 | 4 | 52 | -10.697641 | zinc protease | |
| BBta_7811 | 4 | 48 | -10.131341 | Zn-dependent protease | |
| BBta_7812 | 8 | 42 | -9.286474 | hypothetical protein | |
| BBta_7814 | 6 | 36 | -7.691256 | hypothetical protein | |
| BBta_7815 | 2 | 26 | -5.248862 | transposase | |
| BBta_7817 | 3 | 20 | -4.462868 | transposase | |
| BBta_7818 | 2 | 16 | -3.775017 | transposase | |
| BBta_7819 | 0 | 14 | -3.895393 | transposase |
| 66 | BBta_0082 | BBta_0087 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0082 | 0 | 15 | 3.278329 | 2-octaprenylphenol hydroxylase | |
| BBta_0083 | 0 | 14 | 3.192181 | bifunctional | |
| BBta_0084 | 1 | 14 | 3.562818 | deoxyuridine 5'-triphosphate | |
| BBta_0085 | 0 | 12 | 3.449551 | sensor histidine kinase | |
| BBta_0086 | 1 | 13 | 3.459791 | hypothetical protein | |
| BBta_0087 | 0 | 12 | 3.224246 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0082 | YERSSTKINASE | 32 | 0.005 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0083 | TONBPROTEIN | 30 | 0.016 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0085 | DNABINDINGHU | 28 | 0.035 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0087 | TACYTOLYSIN | 26 | 0.019 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| 67 | BBta_0415 | BBta_0422 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0415 | 0 | 12 | 1.186286 | hypothetical protein | |
| BBta_0416 | 0 | 14 | 0.682711 | rRNA large subunit methyltransferase | |
| BBta_0417 | -1 | 13 | 1.834107 | hypothetical protein | |
| BBta_0418 | -2 | 14 | 2.100900 | nicotinic acid mononucleotide | |
| BBta_0419 | -1 | 14 | 1.747661 | gamma-glutamyl phosphate reductase | |
| BBta_0420 | -2 | 15 | 1.344629 | hypothetical protein | |
| BBta_0421 | -3 | 15 | 1.800613 | hypothetical protein | |
| BBta_0422 | -3 | 16 | 2.126109 | gamma-glutamyl kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0415 | CHANLCOLICIN | 30 | 0.016 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0417 | TYPE4SSCAGA | 27 | 0.044 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0418 | LPSBIOSNTHSS | 32 | 5e-04 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0422 | CARBMTKINASE | 42 | 2e-06 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 68 | BBta_0516 | BBta_0539 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0516 | 2 | 13 | -2.481752 | multi-sensor hybrid histidine kinase | |
| BBta_0517 | 4 | 16 | -2.615255 | response regulator receiver | |
| BBta_0518 | 2 | 12 | -0.821180 | response regulator receiver | |
| BBta_0519 | 3 | 12 | -0.287308 | CRP/FNR family transcriptional regulator | |
| BBta_0521 | 3 | 13 | -0.267598 | hypothetical protein | |
| BBta_0522 | 3 | 15 | -0.794399 | hypothetical protein | |
| BBta_0523 | 1 | 11 | -1.088198 | flagellar biosynthesis repressor FlbT | |
| BBta_0524 | 1 | 10 | -1.021528 | chemotaxis protein CheA | |
| BBta_0525 | 1 | 16 | -3.485866 | CheW protein | |
| BBta_0526 | 1 | 13 | -1.798040 | chemotaxis protein CheY | |
| BBta_0527 | 1 | 12 | -1.556839 | chemotaxis protein CheR | |
| BBta_0528 | 0 | 12 | -0.815498 | hypothetical protein | |
| BBta_0529 | 0 | 10 | -0.308493 | response regulator receiver | |
| BBta_0530 | 0 | 9 | 0.041785 | two component LuxR family transcriptional | |
| BBta_0531 | -1 | 8 | 0.026070 | PAS/PAC sensor hybrid histidine kinase | |
| BBta_0532 | -1 | 10 | -0.098472 | response regulator receiver | |
| BBta_0533 | -1 | 8 | -0.235663 | methyl-accepting chemotaxis protein | |
| BBta_0534 | -1 | 8 | -0.134841 | methyl-accepting chemotaxis protein | |
| BBta_0535 | 0 | 11 | -0.070633 | GntR family transcriptional regulator | |
| BBta_0536 | 0 | 13 | 0.328800 | ABC transporter substrate-binding protein | |
| BBta_0537 | -1 | 12 | 0.922499 | ABC transporter ATP-binding protein | |
| BBta_0538 | -3 | 10 | 1.031459 | ABC transporter permease | |
| BBta_0539 | -3 | 11 | 1.571466 | dihydroxy-acid dehydratase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0516 | HTHFIS | 79 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0517 | HTHFIS | 63 | 8e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0518 | HTHFIS | 83 | 1e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0522 | FLAGELLIN | 57 | 7e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0524 | HTHFIS | 88 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0526 | HTHFIS | 81 | 4e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0529 | HTHFIS | 67 | 1e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0530 | HTHFIS | 112 | 3e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0531 | HTHFIS | 59 | 8e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0532 | HTHFIS | 94 | 2e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0534 | IGASERPTASE | 33 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0537 | PF05272 | 28 | 0.040 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0539 | PF00577 | 32 | 0.007 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 69 | BBta_0549 | BBta_0557 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0549 | -1 | 10 | 2.334824 | hypothetical protein | |
| BBta_0551 | 1 | 10 | 0.899600 | hypothetical protein | |
| BBta_0553 | 0 | 9 | 1.141661 | Zn-dependent hydrolase | |
| BBta_0554 | 0 | 9 | 1.094616 | caspase-like domain-containing protein | |
| BBta_0555 | -1 | 7 | 0.901931 | hypothetical protein | |
| BBta_0556 | -1 | 7 | 0.790244 | HlyD family secretion protein | |
| BBta_0557 | 0 | 7 | 0.682711 | AcrB/AcrD/AcrF family mulitdrug efflux protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0549 | RTXTOXIND | 33 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0554 | PF03544 | 50 | 5e-09 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0555 | OMPADOMAIN | 80 | 5e-20 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0556 | RTXTOXIND | 39 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0557 | ACRIFLAVINRP | 621 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 70 | BBta_0650 | BBta_0657 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0650 | -1 | 9 | -1.177647 | serine protease | |
| BBta_0651 | 0 | 11 | -1.888864 | flavin-containing monooxygenase | |
| BBta_0652 | 1 | 12 | -1.778025 | two component LuxR family transcriptional | |
| BBta_0653 | 1 | 13 | -2.134040 | sensor histidine kinase | |
| BBta_0654 | 2 | 20 | -2.974642 | branched-chain amino acid ABC transporter | |
| BBta_0655 | 1 | 18 | -2.532578 | branched chain amino acid ABC transporter | |
| BBta_0656 | 0 | 16 | -2.309325 | branched chain amino acid ABC transporter | |
| BBta_0657 | 1 | 16 | -1.688183 | branched-chain amino acid ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0650 | V8PROTEASE | 51 | 1e-09 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0652 | HTHFIS | 86 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0653 | HTHFIS | 76 | 3e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0657 | PF05272 | 35 | 3e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 71 | BBta_0808 | BBta_0812 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0808 | 0 | 10 | 2.749422 | RND family mulitdrug efflux protein | |
| BBta_0809 | -1 | 11 | 2.464199 | hypothetical protein | |
| BBta_0810 | -1 | 12 | 1.903870 | transcriptional regulator | |
| BBta_0811 | -1 | 13 | 1.959943 | hypothetical protein | |
| BBta_0812 | -1 | 15 | 1.071634 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0808 | ACRIFLAVINRP | 438 | e-139 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0809 | RTXTOXIND | 42 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0810 | HTHTETR | 63 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0812 | IGASERPTASE | 50 | 6e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 72 | BBta_0879 | BBta_0885 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_0879 | -2 | 12 | 1.193443 | 3-oxoacyl-ACP reductase | |
| BBta_0880 | -1 | 12 | 1.550206 | histidine kinase | |
| BBta_0881 | -2 | 12 | 1.771133 | metal ion transporter | |
| BBta_0882 | -2 | 10 | 1.120998 | ABC transporter substrate-binding protein | |
| BBta_0883 | -1 | 10 | 0.675402 | hypothetical protein | |
| BBta_0884 | 0 | 9 | 0.088265 | ribitol 2-dehydrogenase (RDH) | |
| BBta_0885 | -1 | 10 | 0.020003 | methyl-accepting chemotaxis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0879 | DHBDHDRGNASE | 91 | 2e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0880 | HTHFIS | 81 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0884 | DHBDHDRGNASE | 91 | 3e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_0885 | PYOCINKILLER | 31 | 0.024 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 73 | BBta_1166 | BBta_1174 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1166 | 1 | 12 | 1.765346 | IclR family transcriptional regulator | |
| BBta_1167 | 2 | 13 | 0.982222 | dihydrodipicolinate synthase | |
| BBta_1168 | 1 | 13 | 0.798717 | ABC transporter ATP-binding protein | |
| BBta_1169 | -1 | 11 | 0.725712 | ABC transporter permease | |
| BBta_1170 | -1 | 9 | 0.316236 | ABC transporter substrate-binding protein | |
| BBta_1171 | -1 | 9 | 1.291635 | SDR family dehydrogenase | |
| BBta_1172 | -1 | 9 | 0.530053 | hypothetical protein | |
| BBta_1174 | -2 | 13 | 0.728391 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1166 | PF05616 | 29 | 0.031 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1168 | PF05272 | 33 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1171 | DHBDHDRGNASE | 92 | 1e-24 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1174 | HTHFIS | 79 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 74 | BBta_1273 | BBta_1282 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1273 | -2 | 9 | 0.190058 | hypothetical protein | |
| BBta_1274 | 0 | 9 | 0.431842 | hypothetical protein | |
| BBta_1275 | 0 | 9 | 0.467012 | phosphoesterase family protein | |
| BBta_1276 | 2 | 12 | 1.875399 | hypothetical protein | |
| BBta_1277 | 3 | 12 | 1.800230 | general secretion pathway protein D | |
| BBta_1278 | 1 | 13 | 1.935049 | general secretion pathway protein E | |
| BBta_1279 | -1 | 16 | 1.921609 | general secretion pathway protein F | |
| BBta_1280 | -1 | 21 | 1.580320 | general secretion pathway protein G | |
| BBta_1281 | -1 | 20 | 2.026640 | general secretion pathway protein H | |
| BBta_1282 | 0 | 21 | 2.533787 | general secretion pathway protein I, GspI |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1273 | IGASERPTASE | 30 | 0.009 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1277 | BCTERIALGSPD | 207 | 9e-60 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1279 | BCTERIALGSPF | 238 | 6e-77 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1280 | BCTERIALGSPG | 135 | 1e-43 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1281 | BCTERIALGSPG | 39 | 1e-06 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1282 | BCTERIALGSPH | 27 | 0.014 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| 75 | BBta_1297 | BBta_1314 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1297 | -2 | 8 | 1.895863 | multidrug ABC transporter | |
| BBta_1298 | -2 | 13 | 1.655552 | multidrug resistant protein | |
| BBta_1299 | -2 | 14 | 1.369909 | hypothetical protein | |
| BBta_1300 | 0 | 12 | -0.243087 | hypothetical protein | |
| BBta_1301 | 0 | 12 | -1.182544 | hypothetical protein | |
| BBta_1303 | 0 | 13 | -1.128905 | hypothetical protein | |
| BBta_1304 | -1 | 11 | -0.900150 | cytochrome B561 | |
| BBta_1305 | -1 | 12 | -0.760586 | hypothetical protein | |
| BBta_1306 | -2 | 11 | -0.525513 | hypothetical protein | |
| BBta_1307 | 0 | 12 | -0.732012 | energy transducer TonB | |
| BBta_1308 | -1 | 12 | 0.285598 | biopolymer transport exbD protein | |
| BBta_1309 | -2 | 12 | 0.743040 | biopolymer transport protein | |
| BBta_1310 | -3 | 8 | 1.262982 | hypothetical protein | |
| BBta_1313 | -2 | 8 | 1.274946 | hydroxylase | |
| BBta_1314 | -2 | 8 | 1.615211 | TonB-dependent receptor protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1297 | ACRIFLAVINRP | 594 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1298 | RTXTOXIND | 29 | 0.023 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1299 | IGASERPTASE | 39 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1300 | TONBPROTEIN | 32 | 0.003 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1306 | PERTACTIN | 30 | 0.036 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1307 | PF03544 | 60 | 8e-13 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1310 | RTXTOXINA | 30 | 0.002 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1314 | PF03544 | 31 | 0.017 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 76 | BBta_1341 | BBta_1349 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1341 | 0 | 14 | -0.199605 | ABC transporter substrate-binding protein | |
| BBta_1342 | 0 | 14 | 0.578306 | cobalamin synthesis protein/P47K family protein | |
| BBta_1343 | -1 | 16 | 1.348959 | hypothetical protein | |
| BBta_1344 | -1 | 16 | 1.091790 | hypothetical protein | |
| BBta_1345 | -1 | 20 | 0.910118 | homospermidine synthase | |
| BBta_1346 | -1 | 16 | 0.733705 | hypothetical protein | |
| BBta_1348 | -2 | 15 | 1.366693 | acetyltransferase (GNAT) family protein | |
| BBta_1349 | -2 | 14 | 0.714771 | ornithine decarboxylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1341 | adhesinb | 270 | 1e-92 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1344 | PF05616 | 27 | 0.014 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1348 | SACTRNSFRASE | 35 | 7e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1349 | ALARACEMASE | 34 | 8e-04 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 77 | BBta_1420 | BBta_1425 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1420 | 1 | 16 | -2.017185 | hypothetical protein | |
| BBta_1421 | 0 | 17 | -1.807347 | TetR family transcriptional regulator | |
| BBta_1422 | -1 | 15 | -1.572632 | hypothetical protein | |
| BBta_1423 | -1 | 17 | -1.751731 | RND family mulitdrug efflux protein | |
| BBta_1424 | -1 | 18 | -2.476751 | RND family mulitdrug efflux protein | |
| BBta_1425 | -2 | 16 | -2.592888 | RND family mulitdrug efflux protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1420 | HTHTETR | 37 | 3e-06 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1421 | HTHTETR | 48 | 2e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1423 | RTXTOXIND | 42 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1424 | RTXTOXIND | 37 | 1e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1425 | ACRIFLAVINRP | 485 | e-156 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 78 | BBta_1515 | BBta_1521 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1515 | 2 | 34 | -5.757105 | secretory protein kinase, cpaF | |
| BBta_1516 | 4 | 34 | -5.254016 | Type II secretion system protein | |
| BBta_1517 | 4 | 35 | -5.466611 | hypothetical protein | |
| BBta_1519 | 6 | 36 | -5.811602 | pilus assembly protein CpaC | |
| BBta_1520 | 8 | 30 | -5.523498 | hypothetical protein | |
| BBta_1521 | 7 | 28 | -5.927628 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1515 | PF07675 | 30 | 0.015 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1516 | BCTERIALGSPF | 34 | 7e-04 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1519 | BCTERIALGSPD | 150 | 3e-41 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1521 | SYCDCHAPRONE | 45 | 8e-09 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 79 | BBta_1545 | BBta_1552 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1545 | 4 | 27 | -5.876569 | HlyD family heavy metal efflux pump | |
| BBta_1546 | 5 | 29 | -6.013759 | cation efflux system protein | |
| BBta_1547 | 7 | 28 | -5.755845 | hypothetical protein | |
| BBta_1548 | 5 | 21 | -5.027725 | hypothetical protein | |
| BBta_1549 | 5 | 19 | -4.265511 | LuxR transcriptional regulator | |
| BBta_1550 | 5 | 19 | -3.519579 | ATP-binding region, ATPase-like protein | |
| BBta_1551 | 3 | 14 | -2.101370 | hypothetical protein | |
| BBta_1552 | 3 | 15 | -2.089436 | OmpA-like transmembrane domain-containing |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1545 | RTXTOXIND | 47 | 9e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1546 | ACRIFLAVINRP | 562 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1549 | HTHFIS | 75 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1552 | OMPADOMAIN | 31 | 0.009 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 80 | BBta_1618 | BBta_1628 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1618 | -1 | 13 | 1.707459 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BBta_1619 | 0 | 11 | 2.417596 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BBta_1620 | 2 | 12 | 1.995867 | TetR family transcriptional regulator | |
| BBta_1621 | 0 | 9 | 1.091182 | hypothetical protein | |
| BBta_1623 | -1 | 10 | 0.894592 | transport protein permease | |
| BBta_1624 | -2 | 12 | -0.014422 | HlyD family secretion protein | |
| BBta_1626 | -2 | 13 | -1.799948 | UDP-galactose 4-epimerase | |
| BBta_1627 | -3 | 14 | -1.810412 | hypothetical protein | |
| BBta_1628 | -2 | 15 | -1.040065 | Signal transduction histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1618 | ACRIFLAVINRP | 1068 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1619 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1620 | HTHTETR | 60 | 3e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1623 | TCRTETB | 53 | 2e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1624 | RTXTOXIND | 103 | 2e-26 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1626 | NUCEPIMERASE | 148 | 5e-44 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1628 | PF06580 | 46 | 1e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 81 | BBta_1799 | BBta_1806 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1799 | -1 | 9 | 0.536575 | glutathione S-transferase | |
| BBta_1800 | -2 | 9 | 0.697717 | hypothetical protein | |
| BBta_1801 | -3 | 10 | 0.781429 | aspartate aminotransferase | |
| BBta_1802 | -1 | 8 | 1.926286 | hypothetical protein | |
| BBta_1803 | 0 | 9 | 2.265719 | hypothetical protein | |
| BBta_1805 | -2 | 9 | 1.579164 | elongation factor G | |
| BBta_1806 | -1 | 10 | 1.065561 | two-component sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1799 | FIMREGULATRY | 28 | 0.012 | Escherichia coli: P pili regulatory PapB protein si... | |
>FIMREGULATRY#Escherichia coli: P pili regulatory PapB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1801 | ARGDEIMINASE | 29 | 0.035 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1805 | TCRTETOQM | 308 | 3e-98 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1806 | PF06580 | 39 | 1e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 82 | BBta_1872 | BBta_1880 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_1872 | 0 | 16 | -0.613672 | two component, sigma54 specific, Fis family | |
| BBta_1873 | 3 | 14 | -0.038437 | flagellar motor switch protein | |
| BBta_1874 | 2 | 13 | 0.637561 | flagellar assembly protein H | |
| BBta_1875 | 1 | 12 | 0.492940 | flagellar motor switch protein G | |
| BBta_1876 | 1 | 11 | 1.341277 | flagellar MS-ring protein | |
| BBta_1878 | 1 | 10 | 1.573318 | flagellar basal-body rod modification protein | |
| BBta_1880 | 0 | 13 | 1.476514 | flagellar hook length determination protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1872 | HTHFIS | 423 | e-147 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1873 | FLGMOTORFLIN | 92 | 2e-27 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1875 | FLGMOTORFLIG | 302 | e-103 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1876 | FLGMRINGFLIF | 340 | e-113 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_1880 | FLGHOOKFLIK | 32 | 0.006 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| 83 | BBta_2036 | BBta_2043 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2036 | 2 | 13 | 1.164571 | photosynthetic apparatus regulatory protein | |
| BBta_2038 | 2 | 12 | 1.244731 | hypothetical protein | |
| BBta_2039 | 1 | 11 | 0.664233 | RND family mulitdrug efflux protein | |
| BBta_2040 | 0 | 11 | 0.645427 | RND family mulitdrug efflux protein | |
| BBta_2041 | 0 | 11 | 0.315056 | RND family mulitdrug efflux protein | |
| BBta_2043 | 0 | 10 | 1.317616 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2036 | HTHFIS | 111 | 2e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2038 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2039 | ACRIFLAVINRP | 488 | e-158 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2040 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2041 | RTXTOXIND | 48 | 2e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2043 | HTHTETR | 63 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 84 | BBta_2105 | BBta_2110 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2105 | 2 | 12 | 1.364571 | N-isopropylammelide isopropylaminohydrolase | |
| BBta_2106 | 1 | 14 | 1.993934 | N-carbamoyl-D-amino acid hydrolase | |
| BBta_2107 | 1 | 13 | 2.119727 | Hydantoin racemase HyuA | |
| BBta_2108 | -2 | 12 | 1.010896 | dihydropyrimidinase | |
| BBta_2109 | -2 | 13 | 0.911594 | UDP-glucose 4-epimerase | |
| BBta_2110 | -1 | 12 | 0.786299 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2105 | UREASE | 44 | 1e-06 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2108 | UREASE | 38 | 7e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2109 | NUCEPIMERASE | 95 | 2e-24 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2110 | DHBDHDRGNASE | 104 | 5e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 85 | BBta_2142 | BBta_2148 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2142 | 0 | 8 | -1.530528 | chemotaxis protein CheY | |
| BBta_2143 | 0 | 8 | -1.185685 | chemotaxis protein CheA | |
| BBta_2144 | 0 | 9 | -1.828063 | chemotaxis protein CheW | |
| BBta_2145 | 0 | 10 | -2.111511 | methyl-accepting chemotaxis protein | |
| BBta_2146 | 0 | 14 | -2.539133 | chemotaxis protein CheR | |
| BBta_2147 | 0 | 14 | -1.434366 | MCP proteins methylation stimulator CheD | |
| BBta_2148 | 0 | 14 | -0.629338 | chemotaxis response regulator protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2142 | HTHFIS | 92 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2143 | PF06580 | 40 | 2e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2146 | CHANNELTSX | 30 | 0.006 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2148 | HTHFIS | 75 | 6e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 86 | BBta_2207 | BBta_2217 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2207 | -2 | 13 | 1.305985 | hypothetical protein | |
| BBta_2208 | -1 | 11 | 1.608522 | hypothetical protein | |
| BBta_2209 | -3 | 10 | 0.683570 | hypothetical protein | |
| BBta_2210 | -3 | 9 | 0.269977 | TetR family transcriptional regulator | |
| BBta_2211 | -3 | 10 | -0.262348 | hydrolase | |
| BBta_2213 | -2 | 10 | -0.615231 | MFS family transporter | |
| BBta_2214 | -1 | 10 | -0.718206 | component of multidrug efflux system | |
| BBta_2215 | 0 | 10 | -1.063364 | RND efflux transporter | |
| BBta_2216 | 0 | 11 | -0.793438 | TetR family transcriptional regulator | |
| BBta_2217 | 0 | 12 | 0.146111 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2207 | OMPADOMAIN | 82 | 2e-20 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2210 | HTHTETR | 60 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2214 | RTXTOXIND | 35 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2215 | ACRIFLAVINRP | 473 | e-152 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2216 | HTHTETR | 63 | 2e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2217 | MICOLLPTASE | 27 | 0.046 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| 87 | BBta_2360 | BBta_2364 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2360 | -2 | 9 | 1.625348 | pyruvate phosphate dikinase | |
| BBta_2361 | -2 | 10 | 1.602314 | hypothetical protein | |
| BBta_2362 | -2 | 12 | 1.117445 | L-aspartate oxidase | |
| BBta_2363 | -1 | 13 | 0.498214 | MFS permease | |
| BBta_2364 | -2 | 12 | 1.848721 | dehydrogenase NAD(P)-binding domain-containing |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2360 | PHPHTRNFRASE | 312 | 3e-97 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2361 | IGASERPTASE | 37 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2363 | TCRTETB | 44 | 8e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2364 | NUCEPIMERASE | 32 | 0.004 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 88 | BBta_2604 | BBta_2616 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2604 | -2 | 11 | 0.667176 | hypothetical protein | |
| BBta_2605 | -1 | 10 | 0.483968 | hypothetical protein | |
| BBta_2608 | -1 | 13 | -0.170303 | hypothetical protein | |
| BBta_2609 | 1 | 13 | 0.919021 | general secretion pathway protein D | |
| BBta_2610 | 0 | 15 | 1.297993 | hypothetical protein | |
| BBta_2611 | 2 | 14 | 1.506890 | general secretion pathway protein E | |
| BBta_2612 | 0 | 14 | 1.262972 | general secretion pathway protein F | |
| BBta_2613 | 1 | 16 | 0.989264 | general secretion pathway protein G | |
| BBta_2614 | 1 | 18 | 0.548200 | general secretion pathway protein H | |
| BBta_2615 | 1 | 20 | 0.769681 | general secretion pathway protein I | |
| BBta_2616 | 1 | 20 | 0.254207 | general secretion pathway protein J |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2604 | PF03544 | 31 | 0.009 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2609 | BCTERIALGSPD | 260 | 1e-78 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2612 | BCTERIALGSPF | 204 | 3e-64 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2613 | BCTERIALGSPG | 133 | 8e-43 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2616 | BCTERIALGSPG | 31 | 0.003 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 89 | BBta_2737 | BBta_2740 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2737 | 0 | 10 | 0.044788 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BBta_2738 | -1 | 11 | 0.555539 | RND efflux membrane fusion protein | |
| BBta_2739 | 0 | 10 | 0.754096 | outer membrane efflux protein | |
| BBta_2740 | 2 | 10 | 0.719136 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2737 | ACRIFLAVINRP | 754 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2738 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2739 | RTXTOXIND | 51 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2740 | HTHTETR | 75 | 3e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 90 | BBta_2785 | BBta_2789 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2785 | -3 | 9 | 0.867118 | major facilitator superfamily permease | |
| BBta_2786 | -2 | 11 | -0.173222 | transcriptional regulator FixK | |
| BBta_2787 | -1 | 10 | -1.033029 | response regulator receiver protein | |
| BBta_2788 | 0 | 11 | -1.220112 | response regulator FixJ | |
| BBta_2789 | 1 | 12 | -0.718763 | PAS/PAC sensor signal transduction histidine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2785 | TCRTETA | 47 | 7e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2787 | HTHFIS | 86 | 5e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2788 | HTHFIS | 126 | 2e-36 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2789 | INVEPROTEIN | 30 | 0.014 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
| 91 | BBta_2842 | BBta_2849 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2842 | -1 | 8 | -1.265194 | hypothetical protein | |
| BBta_2843 | -1 | 9 | -1.186561 | histidine kinase, HAMP region | |
| BBta_2844 | -1 | 13 | -0.248813 | cytochrome P450 | |
| BBta_2845 | 0 | 14 | -0.547010 | TetR family transcriptional regulator | |
| BBta_2846 | 0 | 17 | -0.011615 | RND efflux membrane fusion protein | |
| BBta_2847 | 0 | 17 | 0.713052 | RND family multidrug efflux protein | |
| BBta_2848 | 0 | 16 | 1.476514 | ABC transporter permease | |
| BBta_2849 | 0 | 16 | 1.324338 | ABC transporter permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2842 | NUCEPIMERASE | 47 | 5e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2845 | HTHTETR | 62 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2846 | RTXTOXIND | 65 | 1e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2847 | ACRIFLAVINRP | 811 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2849 | SHAPEPROTEIN | 28 | 0.044 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 92 | BBta_2988 | BBta_2992 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_2988 | 0 | 15 | 0.394120 | hypothetical protein | |
| BBta_2989 | 1 | 16 | 0.783890 | cation/heavy metal efflux system protein | |
| BBta_2990 | 1 | 14 | 1.080182 | ABC transporter ATP-binding protein | |
| BBta_2991 | 2 | 15 | 1.133316 | branched chain amino acid ABC transporter | |
| BBta_2992 | 1 | 13 | 0.151824 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2988 | RTXTOXIND | 49 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2989 | ACRIFLAVINRP | 572 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2991 | TCRTETA | 32 | 0.009 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_2992 | ACETATEKNASE | 29 | 0.030 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| 93 | BBta_3077 | BBta_3085 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3077 | -2 | 10 | 1.521349 | serine protease do-like | |
| BBta_3078 | -1 | 11 | 0.902791 | two component transcriptional regulator | |
| BBta_3079 | -1 | 13 | 0.683544 | two component LuxR family transcriptional | |
| BBta_3080 | -2 | 12 | 0.474050 | bacteriophytochrome | |
| BBta_3081 | -3 | 12 | 0.333387 | light harvesting protein B-800-850 | |
| BBta_3082 | -3 | 11 | 0.442396 | light harvesting protein B-800-850 subunit | |
| BBta_3083 | -2 | 11 | 0.938356 | chlorophyll major facilitator superfamily (MFS) | |
| BBta_3084 | -3 | 10 | 0.941531 | hypothetical protein | |
| BBta_3085 | -3 | 12 | 1.235022 | two-component sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3077 | V8PROTEASE | 64 | 3e-13 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3078 | HTHFIS | 87 | 8e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3079 | HTHFIS | 57 | 1e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3083 | TCRTETB | 31 | 0.009 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3085 | PF06580 | 38 | 6e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 94 | BBta_3419 | BBta_3427 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3419 | 0 | 21 | -1.905605 | amino acid permease | |
| BBta_3420 | 0 | 14 | -1.912821 | cytochrome B561 | |
| BBta_3421 | 1 | 9 | -1.377224 | hypothetical protein | |
| BBta_3422 | 0 | 10 | -1.004104 | hypothetical protein | |
| BBta_3423 | 0 | 12 | -0.854675 | hypothetical protein | |
| BBta_3424 | 0 | 11 | -0.742481 | hypothetical protein | |
| BBta_3425 | 1 | 11 | -0.376855 | copper tolerance protein | |
| BBta_3426 | 1 | 12 | 0.280611 | cation efflux system protein cusA | |
| BBta_3427 | 2 | 15 | 1.217439 | cation efflux system protein cusB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3419 | RTXTOXINA | 31 | 0.013 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3421 | TCRTETA | 29 | 0.021 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3424 | PF03944 | 27 | 0.024 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3426 | ACRIFLAVINRP | 693 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3427 | RTXTOXIND | 51 | 8e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 95 | BBta_3533 | BBta_3537 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3533 | -2 | 10 | 0.644986 | SPINDLY family O-linked N-acetylglucosamine | |
| BBta_3534 | -1 | 12 | 0.853625 | *hypothetical protein | |
| BBta_3535 | -2 | 13 | -0.139599 | arylsulfatase | |
| BBta_3536 | -1 | 13 | -0.860466 | component of multidrug efflux pump, mdtB-like | |
| BBta_3537 | -1 | 11 | -0.635867 | component of multidrug efflux pump, mdtA-like |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3533 | SYCDCHAPRONE | 48 | 2e-08 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3534 | HTHTETR | 49 | 3e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3536 | ACRIFLAVINRP | 780 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3537 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 96 | BBta_3574 | BBta_3584 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3574 | -2 | 11 | 1.592902 | MFS family transporter | |
| BBta_3575 | 1 | 9 | 0.990299 | acetyl-CoA acetyltransferase | |
| BBta_3576 | 0 | 11 | 0.748943 | enoyl-CoA hydratase | |
| BBta_3577 | 0 | 10 | 1.021201 | TetR family transcriptional regulator | |
| BBta_3578 | -1 | 12 | 0.443770 | methylmalonate-semialdehyde dehydrogenase | |
| BBta_3579 | -1 | 13 | 0.633939 | acyl-CoA dehydrogenase | |
| BBta_3580 | -2 | 12 | 1.356233 | 3-hydroxyisobutyryl-CoA hydrolase | |
| BBta_3581 | -3 | 11 | 1.236140 | 3-hydroxyisobutyrate dehydrogenase | |
| BBta_3582 | -3 | 12 | 0.110895 | acetyl-CoA synthetase | |
| BBta_3583 | -2 | 15 | -0.561508 | nodN-like protein | |
| BBta_3584 | -2 | 13 | 0.001104 | 3-oxo-acyl-ACP reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3574 | TCRTETB | 31 | 0.013 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3577 | HTHTETR | 57 | 4e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3579 | cdtoxinb | 30 | 0.015 | Cytolethal distending toxin B signature. | |
>cdtoxinb#Cytolethal distending toxin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3580 | PF00577 | 31 | 0.007 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3584 | DHBDHDRGNASE | 83 | 1e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 97 | BBta_3659 | BBta_3668 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3659 | -1 | 11 | -0.307320 | ABC transporter permease | |
| BBta_3660 | 0 | 12 | 0.125170 | ABC transporter permease ATP-binding protein | |
| BBta_3661 | -1 | 11 | -0.435702 | HlyD family secretion protein | |
| BBta_3662 | -1 | 12 | -0.416602 | TetR family transcriptional regulator | |
| BBta_3664 | -2 | 10 | 0.213215 | oxidoreductase | |
| BBta_3665 | 0 | 11 | 1.826472 | YeeE/YedE family membrane protein | |
| BBta_3666 | 2 | 11 | 0.588755 | ArsR family transcriptional regulator | |
| BBta_3667 | 1 | 10 | 0.483034 | thioredoxin | |
| BBta_3668 | 1 | 11 | -0.187631 | transmembrane cytochrome C biogenesis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3659 | ABC2TRNSPORT | 48 | 2e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3660 | PF05272 | 32 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3661 | RTXTOXIND | 73 | 3e-16 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3662 | HTHTETR | 56 | 5e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3668 | ACRIFLAVINRP | 29 | 0.023 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 98 | BBta_3708 | BBta_3715 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3708 | -1 | 10 | 0.460637 | ABC transporter ATP-binding protein | |
| BBta_3709 | -2 | 9 | 1.471366 | hypothetical protein | |
| BBta_3710 | 0 | 10 | 1.592132 | phosphopantetheinyl transferase | |
| BBta_3711 | 1 | 10 | 1.624737 | GntR family transcriptional regulator | |
| BBta_3712 | 1 | 10 | 1.218097 | acetylornithine | |
| BBta_3713 | 2 | 11 | 0.735649 | ABC transporter substrate binding protein | |
| BBta_3714 | 2 | 8 | 0.896343 | nickel ABC transporter permease NikB | |
| BBta_3715 | 1 | 8 | 0.922323 | peptide ABC transporter membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3708 | SECA | 31 | 0.014 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3709 | PF03544 | 38 | 3e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3710 | ENTSNTHTASED | 98 | 4e-27 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3715 | RTXTOXINA | 31 | 0.006 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 99 | BBta_3805 | BBta_3811 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3805 | 1 | 19 | -3.944833 | phosphatase | |
| BBta_3806 | 2 | 18 | -3.036626 | hypothetical protein | |
| BBta_3807 | -3 | 17 | 1.805959 | alanine racemase (alr) | |
| BBta_3808 | -3 | 13 | 1.579755 | replicative DNA helicase | |
| BBta_3809 | -2 | 13 | 2.325827 | hypothetical protein | |
| BBta_3810 | -2 | 13 | 2.127962 | cyclopropane-fatty-acyl-phospholipid synthase | |
| BBta_3811 | 0 | 12 | 3.258812 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3805 | BACYPHPHTASE | 30 | 0.011 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3806 | GPOSANCHOR | 37 | 6e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3807 | ALARACEMASE | 251 | 6e-83 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3811 | IGASERPTASE | 33 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 100 | BBta_3818 | BBta_3824 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3818 | 0 | 14 | -0.690606 | 3-oxoacyl-ACP reductase | |
| BBta_3819 | -1 | 13 | 1.454691 | acyl carrier protein | |
| BBta_3820 | -2 | 11 | 1.531020 | 3-oxoacyl-ACP synthase | |
| BBta_3821 | -2 | 9 | 2.241693 | hypothetical protein | |
| BBta_3822 | -2 | 8 | 2.691854 | hypothetical protein | |
| BBta_3823 | -2 | 8 | 2.194740 | guanylate kinase | |
| BBta_3824 | -2 | 7 | 1.290703 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3818 | DHBDHDRGNASE | 125 | 2e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3819 | ACRIFLAVINRP | 26 | 0.021 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3821 | IGASERPTASE | 33 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3824 | IGASERPTASE | 33 | 0.004 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 101 | BBta_3932 | BBta_3940 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3932 | 0 | 11 | 0.894099 | multidrug resistance protein mdtA | |
| BBta_3933 | 0 | 12 | 0.521111 | multidrug resistance protein mdtB | |
| BBta_3934 | 0 | 10 | -0.076564 | multidrug ABC transporter | |
| BBta_3935 | -2 | 12 | -1.718181 | hypothetical protein | |
| BBta_3936 | -2 | 14 | -2.712498 | *hypothetical protein | |
| BBta_3937 | -1 | 12 | -2.614009 | alcohol dehydrogenase | |
| BBta_3938 | -1 | 23 | -2.992473 | hypothetical protein | |
| BBta_3939 | -1 | 21 | -1.986826 | two-component response regulatory protein, | |
| BBta_3940 | -1 | 18 | -0.911041 | two-component response regulatory protein, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3932 | RTXTOXIND | 39 | 4e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3933 | ACRIFLAVINRP | 765 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3934 | ACRIFLAVINRP | 731 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3939 | HTHFIS | 74 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3940 | HTHFIS | 94 | 2e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 102 | BBta_3954 | BBta_3959 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_3954 | -1 | 7 | 0.536155 | hypothetical protein | |
| BBta_3955 | -1 | 6 | 0.166023 | metalloendopeptidase | |
| BBta_3956 | -1 | 8 | 0.197848 | hypothetical protein | |
| BBta_3957 | -2 | 9 | 0.315848 | hypothetical protein | |
| BBta_3958 | -1 | 10 | -0.308510 | outer membrane autotransporter barrel | |
| BBta_3959 | -1 | 10 | 0.753048 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3954 | PF07675 | 30 | 0.018 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3955 | TYPE4SSCAGA | 35 | 6e-04 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3958 | VACCYTOTOXIN | 31 | 0.036 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_3959 | TCRTETB | 31 | 0.008 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 103 | BBta_4054 | BBta_4061 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4054 | 9 | 24 | 2.148738 | hypothetical protein | |
| BBta_4055 | 3 | 23 | 1.205876 | hypothetical protein | |
| BBta_4056 | 1 | 20 | 0.545136 | hypothetical protein | |
| BBta_4057 | 1 | 19 | 0.489807 | hypothetical protein | |
| BBta_4058 | -1 | 22 | -2.114118 | hypothetical protein | |
| BBta_4059 | -2 | 25 | -1.167391 | hypothetical protein | |
| BBta_4060 | -2 | 17 | -0.566132 | globin family protein | |
| BBta_4061 | -1 | 13 | 1.327809 | response regulator receiver |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4054 | IGASERPTASE | 41 | 2e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4057 | PERTACTIN | 29 | 0.021 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4058 | MICOLLPTASE | 28 | 0.014 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4061 | HTHFIS | 61 | 5e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 104 | BBta_4065 | BBta_4077 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4065 | -2 | 8 | 2.056589 | hydrolase | |
| BBta_4066 | -1 | 11 | 1.746417 | hypothetical protein | |
| BBta_4067 | 0 | 10 | 0.929083 | 2-C-methyl-D-erythritol 4-phosphate | |
| BBta_4068 | -1 | 11 | 0.503195 | tRNA-dihydrouridine synthase | |
| BBta_4069 | -1 | 11 | 0.288037 | signal transduction histidine kinase, nitrogen | |
| BBta_4070 | -1 | 10 | 0.434897 | nitrogen metabolism transcriptional regulator | |
| BBta_4071 | 0 | 8 | 0.335718 | multi-sensor signal transduction histidine | |
| BBta_4072 | 0 | 6 | 0.327175 | two component, sigma54 specific, Fis family | |
| BBta_4073 | 0 | 6 | 0.421175 | RNA-binding protein Hfq | |
| BBta_4074 | 0 | 6 | 0.707950 | GTP-binding protein (hflX) | |
| BBta_4075 | 0 | 7 | 0.410947 | acetolactate synthase catalytic subunit | |
| BBta_4076 | 0 | 9 | 0.387369 | hypothetical protein | |
| BBta_4077 | 2 | 10 | 0.035671 | 4-hydroxybenzoate transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4065 | PF06057 | 29 | 0.028 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4070 | HTHFIS | 589 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4071 | PF06580 | 46 | 3e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4072 | HTHFIS | 423 | e-147 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4077 | TCRTETB | 65 | 3e-13 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 105 | BBta_4103 | BBta_4110 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4103 | -1 | 10 | -0.601750 | serine-type D-Ala-D-Ala carboxypeptidase | |
| BBta_4104 | 0 | 14 | -0.731881 | epoxide hydrolase | |
| BBta_4105 | 0 | 18 | -1.642620 | hypothetical protein | |
| BBta_4106 | 0 | 19 | -1.381848 | hypothetical protein | |
| BBta_4107 | 0 | 21 | -1.997591 | *AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BBta_4108 | 0 | 23 | -2.026173 | secretion protein (HlyD) | |
| BBta_4109 | -1 | 20 | -2.263935 | glycosyltransferase | |
| BBta_4110 | -1 | 16 | -2.442620 | non-ribosomal peptide synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4103 | BLACTAMASEA | 36 | 2e-04 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4107 | ACRIFLAVINRP | 596 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4108 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4110 | NUCEPIMERASE | 40 | 6e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 106 | BBta_4215 | BBta_4222 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4215 | -1 | 12 | 0.068434 | biotin carboxyl carrier protein | |
| BBta_4216 | -2 | 11 | 0.567556 | acetyl-CoA carboxylase biotin carboxylase | |
| BBta_4217 | -3 | 11 | 1.109565 | multi-sensor signal transduction histidine | |
| BBta_4218 | -2 | 11 | 1.981564 | two-component response regulator/receiver | |
| BBta_4219 | -2 | 11 | 2.906793 | signal transduction histidine kinase | |
| BBta_4220 | -1 | 11 | 2.077547 | leucyl/phenylalanyl-tRNA--protein transferase | |
| BBta_4221 | -1 | 12 | 1.797253 | hypothetical protein | |
| BBta_4222 | 0 | 14 | 1.468576 | Levodione reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4215 | RTXTOXIND | 33 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4217 | PF06580 | 39 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4218 | HTHFIS | 52 | 1e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4219 | HTHFIS | 86 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4221 | IGASERPTASE | 33 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4222 | DHBDHDRGNASE | 110 | 2e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 107 | BBta_4334 | BBta_4346 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4334 | 0 | 10 | -0.670211 | hypothetical protein | |
| BBta_4335 | 1 | 9 | -0.315345 | hypothetical protein | |
| BBta_4336 | -1 | 8 | -0.229748 | toxin/protease secretion system | |
| BBta_4337 | -1 | 8 | -0.157501 | toxin/protease secretion system | |
| BBta_4338 | 0 | 8 | -0.146817 | hypothetical protein | |
| BBta_4340 | 0 | 7 | -0.149919 | hypothetical protein | |
| BBta_4341 | -1 | 8 | 0.099702 | hypothetical protein | |
| BBta_4342 | -1 | 7 | -0.120570 | hypothetical protein | |
| BBta_4343 | -1 | 10 | -0.214030 | hypothetical protein | |
| BBta_4344 | 1 | 17 | -0.199453 | methionyl-tRNA formyltransferase | |
| BBta_4346 | 1 | 19 | -0.575876 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4334 | GPOSANCHOR | 45 | 6e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4337 | RTXTOXIND | 341 | e-113 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4340 | cloacin | 33 | 0.008 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4341 | cloacin | 51 | 9e-09 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4342 | SYCDCHAPRONE | 42 | 4e-06 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4346 | VACJLIPOPROT | 27 | 0.014 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| 108 | BBta_4369 | BBta_4383 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4369 | 0 | 13 | -0.433976 | phosphopantetheine adenylyltransferase | |
| BBta_4370 | -1 | 13 | -0.112833 | hypothetical protein | |
| BBta_4371 | 1 | 13 | -0.684624 | DNA gyrase subunit A | |
| BBta_4373 | 10 | 19 | -0.108244 | single-stranded DNA-binding protein | |
| BBta_4374 | 4 | 19 | 0.182866 | outer-membrane protein | |
| BBta_4375 | 4 | 18 | 0.317655 | outer-membrane protein | |
| BBta_4376 | 4 | 19 | 0.338124 | outer-membrane protein | |
| BBta_4377 | 3 | 17 | 0.108604 | outer-membrane protein | |
| BBta_4378 | 1 | 15 | 0.774012 | outer-membrane protein | |
| BBta_4379 | 1 | 14 | 0.614175 | excinuclease ABC subunit A | |
| BBta_4380 | 3 | 13 | 1.077387 | hypothetical protein | |
| BBta_4382 | 1 | 13 | 0.757446 | hypothetical protein | |
| BBta_4383 | 0 | 14 | 1.209194 | phosphoglycolate phosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4369 | LPSBIOSNTHSS | 169 | 1e-56 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4374 | OMPADOMAIN | 38 | 3e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4376 | OMPADOMAIN | 37 | 5e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4377 | OMPADOMAIN | 43 | 4e-07 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4378 | OMPADOMAIN | 31 | 0.002 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4383 | BCTERIALGSPF | 28 | 0.034 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| 109 | BBta_4516 | BBta_4525 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4516 | -2 | 10 | 2.638255 | elongation factor Ts | |
| BBta_4517 | -2 | 9 | 2.375572 | 30S ribosomal protein S2 | |
| BBta_4518 | -2 | 9 | 2.474660 | hypothetical protein | |
| BBta_4519 | -1 | 9 | 2.436259 | hypothetical protein | |
| BBta_4520 | -1 | 10 | 2.132667 | hypothetical protein | |
| BBta_4521 | 0 | 11 | 2.233022 | caspase-like domain-containing protein | |
| BBta_4522 | -2 | 9 | 0.456237 | DNA polymerase III subunit alpha | |
| BBta_4523 | 0 | 12 | -0.045475 | outer-membrane protein | |
| BBta_4524 | -2 | 10 | -0.816428 | hypothetical protein | |
| BBta_4525 | -3 | 7 | -0.988137 | outer-membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4516 | BCTERIALGSPF | 28 | 0.049 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4520 | V8PROTEASE | 55 | 3e-10 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4521 | cloacin | 35 | 0.001 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4523 | OMPADOMAIN | 54 | 1e-10 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4524 | PRTACTNFAMLY | 26 | 0.034 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4525 | OMPADOMAIN | 34 | 5e-04 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 110 | BBta_4611 | BBta_4618 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4611 | 0 | 13 | -0.108388 | hypothetical protein | |
| BBta_4612 | 0 | 14 | 0.099453 | hypothetical protein | |
| BBta_4613 | 0 | 11 | 0.108233 | acetamidase/formamidase family protein | |
| BBta_4614 | 2 | 13 | -0.015625 | recombinase | |
| BBta_4615 | -1 | 13 | -0.805411 | hypothetical protein | |
| BBta_4616 | -3 | 12 | -0.094241 | hypothetical protein | |
| BBta_4617 | -1 | 14 | 0.781673 | hypothetical protein | |
| BBta_4618 | -1 | 15 | 0.389851 | short-chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4611 | SYCDCHAPRONE | 42 | 2e-06 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4612 | PF03309 | 31 | 0.003 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4617 | HTHTETR | 27 | 0.030 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4618 | DHBDHDRGNASE | 56 | 3e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 111 | BBta_4889 | BBta_4896 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4889 | -1 | 11 | 2.207828 | ABC transporter ATP-binding protein | |
| BBta_4890 | -2 | 11 | 2.020491 | ABC transporter permease | |
| BBta_4891 | -2 | 10 | 2.019272 | *hypothetical protein | |
| BBta_4892 | -2 | 11 | 2.463776 | lipoate-protein ligase B | |
| BBta_4893 | -1 | 10 | 2.203739 | hypothetical protein | |
| BBta_4894 | -2 | 10 | 2.241637 | LysR family transcriptional regulator | |
| BBta_4895 | -1 | 9 | 2.034136 | AraC family transcriptional regulator | |
| BBta_4896 | 0 | 10 | 2.240534 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4889 | PF05272 | 29 | 0.016 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4891 | FLGMOTORFLIN | 51 | 7e-12 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4895 | ISCHRISMTASE | 32 | 0.005 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4896 | NUCEPIMERASE | 44 | 1e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 112 | BBta_4902 | BBta_4914 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_4902 | 1 | 10 | 1.245169 | acyl-CoA carboxylase biotin-carrying subunit | |
| BBta_4903 | 1 | 9 | 1.666742 | hypothetical protein | |
| BBta_4904 | 1 | 9 | 1.932325 | hypothetical protein | |
| BBta_4905 | 2 | 10 | 2.482838 | PAS/PAC sensor hybrid histidine kinase | |
| BBta_4906 | 2 | 10 | 2.853460 | two-component system sensor protein | |
| BBta_4907 | 1 | 9 | 2.224150 | response regulator in two-component reguatory | |
| BBta_4908 | -2 | 12 | 1.452202 | hypothetical protein | |
| BBta_4909 | -3 | 12 | 1.239376 | hypothetical protein | |
| BBta_4910 | -3 | 10 | 1.438044 | major facilitator transporter | |
| BBta_4911 | -2 | 12 | 0.728841 | arsenite permease | |
| BBta_4912 | -1 | 12 | 0.187054 | hypothetical protein | |
| BBta_4913 | -1 | 11 | 1.877664 | hypothetical protein | |
| BBta_4914 | -1 | 8 | 2.002287 | serine protease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4902 | RTXTOXIND | 31 | 0.022 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4905 | HTHFIS | 70 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4906 | PF06580 | 39 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4907 | HTHFIS | 473 | e-167 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4909 | TONBPROTEIN | 28 | 0.017 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4910 | TCRTETB | 38 | 5e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_4914 | V8PROTEASE | 68 | 5e-15 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 113 | BBta_5196 | BBta_5202 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5196 | 0 | 21 | -1.196540 | autoinducer synthesis protein | |
| BBta_5197 | 0 | 18 | -0.320421 | hypothetical protein | |
| BBta_5198 | 0 | 17 | 0.009142 | outer efflux pump domain-containing protein | |
| BBta_5199 | 0 | 13 | -0.331908 | ABC transporter permease | |
| BBta_5200 | -1 | 11 | 0.710523 | ABC transporter ATP-binding protein | |
| BBta_5201 | 0 | 11 | 1.357063 | hypothetical protein | |
| BBta_5202 | -2 | 10 | 0.804988 | inner membrane transport protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5196 | AUTOINDCRSYN | 124 | 7e-38 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5197 | RTXTOXIND | 82 | 6e-19 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5201 | OMPADOMAIN | 26 | 0.038 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5202 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 114 | BBta_5344 | BBta_5357 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5344 | -1 | 11 | 1.385854 | hydrolase | |
| BBta_5345 | 1 | 12 | 2.172073 | TetR family transcriptional regulator | |
| BBta_5346 | 1 | 11 | 1.959244 | hypothetical protein | |
| BBta_5347 | 1 | 11 | 1.472555 | hypothetical protein | |
| BBta_5348 | 0 | 13 | 2.111657 | hypothetical protein | |
| BBta_5349 | -2 | 11 | 0.860296 | two-component sensor histidine kinase | |
| BBta_5350 | -2 | 11 | -0.641926 | two-component response regulator | |
| BBta_5351 | -2 | 12 | -0.100342 | TetR family transcriptional regulator | |
| BBta_5352 | -2 | 13 | 0.208678 | hypothetical protein | |
| BBta_5353 | -1 | 13 | 0.044846 | adenylosuccinate lyase | |
| BBta_5354 | -2 | 12 | 0.547048 | hypothetical protein | |
| BBta_5356 | 0 | 12 | 1.603167 | cytochrome B561 | |
| BBta_5357 | 0 | 12 | 2.057029 | cell division protein FtsH |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5344 | TYPE3OMBPROT | 28 | 0.039 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5345 | HTHTETR | 49 | 1e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5349 | PF06580 | 45 | 3e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5350 | HTHFIS | 76 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5351 | HTHTETR | 61 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5357 | PF05272 | 32 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 115 | BBta_5491 | BBta_5504 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5491 | 0 | 15 | -0.557711 | cell cycle control histidine kinase CckA | |
| BBta_5492 | 1 | 15 | -2.014358 | flagellar biosynthesis protein FlhB | |
| BBta_5493 | -1 | 14 | 1.347721 | flagellar biosynthesis protein FliR | |
| BBta_5494 | -1 | 17 | 1.444683 | flagellar biosynthesis protein FliQ | |
| BBta_5495 | -2 | 12 | 2.001172 | flagellar hook-basal body protein FliE | |
| BBta_5496 | -2 | 10 | 0.790039 | flagellar basal body rod protein FlgC | |
| BBta_5497 | -2 | 11 | 1.293770 | flagellar basal body rod protein FlgB | |
| BBta_5498 | -1 | 13 | 2.054982 | hypothetical protein | |
| BBta_5499 | -1 | 14 | 1.105594 | flagellar biosynthesis protein FliP | |
| BBta_5500 | -1 | 13 | 1.237272 | prolyl aminopeptidase | |
| BBta_5502 | -1 | 13 | 0.733335 | alcohol dehydrogenase | |
| BBta_5503 | 2 | 12 | 1.106901 | hypothetical protein | |
| BBta_5504 | 1 | 12 | 0.789437 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5491 | HTHFIS | 82 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5492 | TYPE3IMSPROT | 319 | e-110 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5493 | TYPE3IMRPROT | 123 | 2e-36 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5494 | TYPE3IMQPROT | 59 | 2e-15 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5495 | FLGHOOKFLIE | 47 | 5e-10 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5496 | FLGHOOKAP1 | 30 | 0.003 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5498 | IGASERPTASE | 55 | 3e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5499 | FLGBIOSNFLIP | 273 | 2e-95 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5504 | IGASERPTASE | 44 | 3e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 116 | BBta_5507 | BBta_5528 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5507 | 0 | 17 | -0.188371 | flagellar motor switch protein FliM | |
| BBta_5508 | 0 | 17 | 0.588755 | flagellar basal body-associated protein FliL | |
| BBta_5509 | 0 | 14 | 1.988799 | flagellar basal body rod protein FlgF | |
| BBta_5510 | 0 | 11 | 2.383340 | flagellar basal body rod protein FlgG | |
| BBta_5511 | -2 | 10 | 2.168294 | flagellar basal body P-ring biosynthesis protein | |
| BBta_5512 | 0 | 9 | 1.723913 | flagellar basal body L-ring protein | |
| BBta_5513 | -1 | 9 | 1.879394 | hydratase/decarboxylase | |
| BBta_5514 | 0 | 9 | 1.853109 | dihydrokaempferol 4-reductase | |
| BBta_5515 | -2 | 8 | 0.688380 | hypothetical protein | |
| BBta_5516 | 1 | 11 | -0.310889 | DnaK suppressor protein | |
| BBta_5517 | -1 | 11 | 0.753411 | hypothetical protein | |
| BBta_5518 | -1 | 11 | 0.032495 | transcriptional regulator | |
| BBta_5519 | -1 | 15 | -0.694283 | flagellar assembly regulator FliX | |
| BBta_5520 | 0 | 16 | -2.211372 | flagellar basal body P-ring protein | |
| BBta_5521 | 3 | 15 | -3.123594 | chemotactic signal-response protein CheL | |
| BBta_5522 | 6 | 16 | -2.706397 | hypothetical protein | |
| BBta_5524 | 5 | 15 | -3.424801 | hypothetical protein | |
| BBta_5525 | 7 | 17 | -2.962747 | hypothetical protein | |
| BBta_5526 | 5 | 15 | -1.430938 | flagellar biosynthesis regulatory protein FlaF | |
| BBta_5527 | 3 | 13 | -0.588458 | flagellin protein, C-terminus | |
| BBta_5528 | 2 | 13 | 0.665530 | flagellin protein, C-terminus |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5507 | FLGMOTORFLIM | 280 | 3e-94 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5510 | FLGHOOKAP1 | 39 | 1e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5512 | FLGLRINGFLGH | 185 | 1e-60 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5514 | NUCEPIMERASE | 76 | 8e-18 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5517 | NUCEPIMERASE | 48 | 5e-09 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5520 | FLGPRINGFLGI | 390 | e-137 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5521 | FLGFLGJ | 35 | 3e-05 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5527 | FLAGELLIN | 56 | 2e-10 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5528 | FLAGELLIN | 55 | 3e-10 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 117 | BBta_5617 | BBta_5621 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5617 | -1 | 12 | 0.692236 | SPINDLY family O-linked N-acetylglucosamine | |
| BBta_5618 | -2 | 11 | 0.298058 | SPINDLY family O-linked N-acetylglucosamine | |
| BBta_5619 | -1 | 12 | 0.104580 | SPINDLY family O-linked N-acetylglucosamine | |
| BBta_5620 | -2 | 13 | -1.292546 | mannose-1-phosphate guanylyltransferase (GDP) | |
| BBta_5621 | -2 | 15 | -2.295345 | nucleotide sugar epimerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5617 | SYCDCHAPRONE | 53 | 5e-10 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5618 | SYCDCHAPRONE | 48 | 1e-08 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5619 | SYCDCHAPRONE | 45 | 2e-07 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5621 | NUCEPIMERASE | 525 | 0.0 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 118 | BBta_5933 | BBta_5941 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_5933 | 0 | 10 | 0.322602 | NifA subfamily transcriptional regulator | |
| BBta_5935 | 2 | 12 | 1.872786 | FixR protein | |
| BBta_5936 | 2 | 10 | 1.613672 | hypothetical protein | |
| BBta_5937 | 0 | 10 | 1.461968 | hypothetical protein | |
| BBta_5938 | 0 | 10 | 1.535973 | oxidoreductase NAD(P)-binding subunit | |
| BBta_5939 | 0 | 11 | 2.125716 | hypothetical protein | |
| BBta_5940 | 0 | 12 | 1.669895 | signal transduction histidine kinase, | |
| BBta_5941 | -1 | 13 | 1.224884 | two component LuxR family transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5933 | HTHFIS | 446 | e-155 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5935 | DHBDHDRGNASE | 100 | 3e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5936 | RTXTOXIND | 35 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5938 | DHBDHDRGNASE | 85 | 2e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_5941 | HTHFIS | 57 | 6e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 119 | BBta_6143 | BBta_6152 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6143 | 0 | 7 | 0.605791 | hypothetical protein | |
| BBta_6144 | -1 | 8 | -0.017896 | hypothetical protein | |
| BBta_6145 | -1 | 11 | -0.399457 | NAD dependent epimerase/dehydratase family | |
| BBta_6146 | 0 | 14 | -0.366961 | hypothetical protein | |
| BBta_6147 | -1 | 14 | -0.548724 | hypothetical protein | |
| BBta_6148 | -1 | 15 | -0.812830 | hypothetical protein | |
| BBta_6149 | 0 | 11 | -1.056407 | ABC transporter ATP-binding protein | |
| BBta_6150 | -1 | 11 | -1.246856 | ABC-2 type transporter permease | |
| BBta_6151 | -1 | 10 | -0.413082 | hypothetical protein | |
| BBta_6152 | -1 | 9 | -0.146704 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6143 | OMPADOMAIN | 67 | 2e-15 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6145 | NUCEPIMERASE | 74 | 8e-17 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6146 | VACCYTOTOXIN | 30 | 0.008 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6148 | PF06057 | 34 | 5e-04 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6150 | ABC2TRNSPORT | 68 | 9e-16 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6152 | PRTACTNFAMLY | 30 | 0.009 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 120 | BBta_6187 | BBta_6201 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6187 | 0 | 11 | 0.208930 | multidrug resistance protein B | |
| BBta_6188 | -1 | 10 | 1.023924 | multidrug resistance protein A | |
| BBta_6189 | 1 | 11 | 1.000726 | TetR family transcriptional regulator | |
| BBta_6191 | 0 | 11 | 1.325699 | CopG family transcriptional regulator | |
| BBta_6192 | 0 | 12 | 2.078856 | outer membrane receptor | |
| BBta_6193 | 1 | 13 | 3.359073 | hypothetical protein | |
| BBta_6194 | 2 | 13 | 3.016423 | hypothetical protein | |
| BBta_6195 | 0 | 12 | 3.084291 | hypothetical protein | |
| BBta_6196 | 0 | 10 | 2.413074 | hypothetical protein | |
| BBta_6197 | 1 | 11 | 2.358291 | hypothetical protein | |
| BBta_6198 | 1 | 9 | 2.060284 | two component sensor histidine kinase | |
| BBta_6199 | 1 | 10 | 1.523242 | OmpR family two component response | |
| BBta_6200 | 0 | 10 | 1.659397 | multidrug efflux system outer membrane subunit | |
| BBta_6201 | 1 | 10 | 1.240645 | accessory protein to ABC-type macrolide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6187 | TCRTETB | 101 | 6e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6188 | RTXTOXIND | 110 | 2e-28 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6189 | HTHTETR | 74 | 2e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6192 | TONBPROTEIN | 38 | 6e-05 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6197 | PF03544 | 40 | 3e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6198 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6199 | HTHFIS | 84 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6201 | RTXTOXIND | 61 | 3e-12 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 121 | BBta_6239 | BBta_6246 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6239 | 0 | 11 | -0.041333 | cation efflux membrane fusion protein | |
| BBta_6240 | -1 | 11 | -0.157015 | cation efflux system protein | |
| BBta_6241 | 2 | 19 | -1.828834 | hypothetical protein | |
| BBta_6242 | 2 | 15 | -0.454578 | bacterioferritin | |
| BBta_6243 | 2 | 12 | 0.143120 | bacterioferritin-associated ferredoxin | |
| BBta_6244 | 1 | 11 | -0.483526 | hypothetical protein | |
| BBta_6245 | 1 | 12 | -0.598476 | hypothetical protein | |
| BBta_6246 | -1 | 12 | -0.311444 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6239 | RTXTOXIND | 42 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6240 | ACRIFLAVINRP | 691 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6242 | HELNAPAPROT | 29 | 0.007 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6244 | cloacin | 29 | 0.002 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6245 | OMPADOMAIN | 30 | 0.002 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6246 | TCRTETA | 26 | 0.023 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 122 | BBta_6255 | BBta_6267 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6255 | -1 | 8 | -0.331579 | hypothetical protein | |
| BBta_6256 | -1 | 9 | -1.705017 | 3-mercaptopyruvate sulfurtransferase | |
| BBta_6257 | 0 | 10 | -1.179884 | hypothetical protein | |
| BBta_6258 | 0 | 10 | 0.261927 | hypothetical protein | |
| BBta_6259 | -2 | 10 | 0.843064 | hypothetical protein | |
| BBta_6260 | -3 | 10 | 0.822381 | ATPase | |
| BBta_6261 | -3 | 10 | 0.685587 | response regulator receiver | |
| BBta_6262 | -3 | 10 | 0.168382 | sensor histidine kinase | |
| BBta_6263 | -2 | 11 | 0.286800 | hypothetical protein | |
| BBta_6264 | -1 | 11 | -0.647542 | non-hemolytic phospholipase C | |
| BBta_6265 | -3 | 10 | -0.429162 | sensor histidine kinase | |
| BBta_6267 | -3 | 10 | -0.117481 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6255 | IGASERPTASE | 42 | 4e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6259 | BACINVASINB | 25 | 0.037 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6261 | HTHFIS | 28 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6262 | HTHFIS | 102 | 1e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6265 | HTHFIS | 56 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6267 | PF04605 | 30 | 0.007 | Virulence-associated protein D (VapD) | |
>PF04605#Virulence-associated protein D (VapD) | |||||
| 123 | BBta_6380 | BBta_6387 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6380 | -3 | 14 | -0.119425 | two-component sensor histidine kinase | |
| BBta_6381 | -3 | 12 | 0.077494 | two-component LuxR family transcriptional | |
| BBta_6382 | -3 | 8 | 0.078948 | hypothetical protein | |
| BBta_6384 | -2 | 8 | 0.624841 | hypothetical protein | |
| BBta_6385 | -1 | 9 | 0.936917 | peptidase | |
| BBta_6387 | 0 | 12 | 0.128557 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6380 | HTHFIS | 56 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6381 | HTHFIS | 70 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6385 | SUBTILISIN | 143 | 2e-39 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6387 | cloacin | 38 | 7e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 124 | BBta_6556 | BBta_6565 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6556 | 0 | 11 | 1.339008 | chemotaxis-specific methylesterase | |
| BBta_6557 | 0 | 12 | 1.588974 | chemotaxis protein CheY | |
| BBta_6558 | -1 | 13 | 2.282457 | CheW protein | |
| BBta_6559 | 0 | 14 | 2.551595 | chemotaxis protein CheA | |
| BBta_6560 | 2 | 13 | 2.950656 | hypothetical protein | |
| BBta_6561 | 4 | 14 | 3.033940 | CysQ protein | |
| BBta_6562 | 5 | 15 | 1.737040 | hypothetical protein | |
| BBta_6564 | 5 | 17 | 1.907670 | hypothetical protein | |
| BBta_6565 | 6 | 18 | 0.581004 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6556 | HTHFIS | 60 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6557 | HTHFIS | 84 | 1e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6559 | HTHFIS | 87 | 9e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6564 | GPOSANCHOR | 33 | 6e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6565 | GPOSANCHOR | 46 | 2e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 125 | BBta_6668 | BBta_6676 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6668 | 0 | 10 | 1.932974 | hypothetical protein | |
| BBta_6669 | -2 | 9 | 1.564635 | hypothetical protein | |
| BBta_6670 | -1 | 10 | 0.958725 | hypothetical protein | |
| BBta_6672 | -1 | 9 | 0.654085 | short-chain dehydrogenase/reductase | |
| BBta_6673 | -1 | 9 | 0.518343 | hemolysin III | |
| BBta_6674 | -2 | 9 | 0.704127 | hypothetical protein | |
| BBta_6675 | -2 | 8 | 0.418920 | hypothetical protein | |
| BBta_6676 | -1 | 10 | 0.381446 | glycosyl transferase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6668 | PYOCINKILLER | 29 | 0.031 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6669 | IGASERPTASE | 32 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6672 | DHBDHDRGNASE | 75 | 6e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6676 | PF04335 | 31 | 0.009 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| 126 | BBta_6688 | BBta_6695 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6688 | -1 | 19 | 0.170782 | hypothetical protein | |
| BBta_6689 | -1 | 15 | 0.433001 | hypothetical protein | |
| BBta_6690 | 0 | 12 | 0.130445 | ABC transporter periplasmic substrate-binding | |
| BBta_6691 | 0 | 8 | 0.637629 | ABC transporter | |
| BBta_6692 | -1 | 7 | 0.933278 | ABC transporter ATP-binding protein | |
| BBta_6693 | -1 | 7 | 0.870532 | two component transcriptional regulator | |
| BBta_6694 | -1 | 8 | 0.682582 | two-component system histidine kinase | |
| BBta_6695 | -3 | 9 | 0.354113 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6688 | cloacin | 31 | 0.006 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6692 | PF05272 | 28 | 0.038 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6693 | HTHFIS | 94 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6694 | PF06580 | 30 | 0.025 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6695 | SYCDCHAPRONE | 36 | 8e-05 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 127 | BBta_6716 | BBta_6722 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6716 | -2 | 10 | 1.912602 | Fis family transcriptional regulator | |
| BBta_6717 | -1 | 11 | 1.634238 | methyl-accepting chemotaxis sensory transducer | |
| BBta_6718 | 0 | 11 | 1.018158 | hypothetical protein | |
| BBta_6719 | 1 | 14 | 0.996539 | catalase | |
| BBta_6720 | 1 | 12 | -0.714042 | hypothetical protein | |
| BBta_6721 | -1 | 10 | -1.175935 | cytochrome P450 | |
| BBta_6722 | 1 | 13 | -1.389193 | signal transduction histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6716 | HTHFIS | 58 | 2e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6718 | OMPADOMAIN | 35 | 5e-04 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6720 | IGASERPTASE | 33 | 4e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6722 | PF06580 | 37 | 9e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 128 | BBta_6931 | BBta_6940 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_6931 | -2 | 13 | 1.011724 | beta-lactamase | |
| BBta_6932 | -2 | 15 | 0.847110 | inositol monophosphatase | |
| BBta_6933 | -3 | 14 | 0.778023 | hypothetical protein | |
| BBta_6934 | -2 | 14 | 1.005257 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BBta_6935 | -3 | 13 | 2.026324 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BBta_6936 | -1 | 14 | 1.474237 | cyclopropane-fatty-acyl-phospholipid synthase | |
| BBta_6937 | -2 | 14 | 2.491922 | hypothetical protein | |
| BBta_6938 | -2 | 15 | 2.004730 | hypothetical protein | |
| BBta_6939 | -2 | 13 | 1.935419 | hypothetical protein | |
| BBta_6940 | -2 | 13 | 2.289497 | acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6931 | PF03544 | 36 | 1e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6933 | ENTEROVIROMP | 27 | 0.037 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6934 | ACRIFLAVINRP | 1051 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6935 | RTXTOXIND | 51 | 5e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6939 | OMPADOMAIN | 82 | 1e-19 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_6940 | SACTRNSFRASE | 47 | 3e-09 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 129 | BBta_7029 | BBta_7038 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7029 | 0 | 12 | -0.152302 | type IV prepilin peptidase, cpaA | |
| BBta_7030 | -1 | 13 | -0.367996 | pilus assembly protein CpaB | |
| BBta_7031 | -1 | 12 | -0.894689 | pilus assembly protein CpaC | |
| BBta_7032 | -1 | 12 | -0.017136 | pilus assembly protein CpaD | |
| BBta_7033 | -2 | 10 | 0.076804 | pilus assembly protein CpaE | |
| BBta_7034 | -1 | 10 | 0.544278 | secretory protein kinase, cpaF-like gene | |
| BBta_7035 | 0 | 10 | 1.101169 | pilus assembly protein | |
| BBta_7036 | 0 | 10 | 1.447480 | pilus assembly protein | |
| BBta_7037 | -1 | 11 | 1.474255 | allantoate amidohydrolase | |
| BBta_7038 | 1 | 12 | 0.849294 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7029 | PREPILNPTASE | 40 | 2e-06 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7031 | BCTERIALGSPD | 117 | 3e-30 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7033 | HTHFIS | 36 | 3e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7035 | BCTERIALGSPF | 29 | 0.029 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7038 | SYCDCHAPRONE | 31 | 0.004 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 130 | BBta_7229 | BBta_7235 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7229 | 2 | 29 | -3.186408 | two-component response regulator | |
| BBta_7230 | 2 | 30 | -4.133275 | hypothetical protein | |
| BBta_7231 | 4 | 24 | -2.346375 | hypothetical protein | |
| BBta_7233 | 3 | 21 | -1.823935 | flagellar L-ring protein FlgH | |
| BBta_7234 | 3 | 21 | -2.197927 | hypothetical protein | |
| BBta_7235 | 1 | 20 | -1.334079 | outer membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7229 | HTHFIS | 79 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7233 | FLGLRINGFLGH | 64 | 9e-15 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7234 | FLGFLIH | 27 | 0.003 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7235 | OMPADOMAIN | 55 | 2e-11 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 131 | BBta_7241 | BBta_7245 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BBta_7241 | 0 | 18 | -2.155045 | flagellar hook-associated protein | |
| BBta_7242 | 1 | 18 | -2.960764 | flagellar hook protein FlgE | |
| BBta_7243 | 1 | 19 | -2.857497 | hypothetical protein | |
| BBta_7244 | 2 | 18 | -2.587810 | flagellar basal-body rod modification protein | |
| BBta_7245 | 1 | 17 | -2.613087 | short-chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7241 | FLGHOOKAP1 | 129 | 6e-34 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7242 | FLGHOOKAP1 | 32 | 0.007 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7243 | FLAGELLIN | 48 | 9e-08 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BBta_7245 | DHBDHDRGNASE | 117 | 8e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||