| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | SF0052 | SF0059 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0052 | -2 | 16 | 3.402546 | Dna-J like membrane chaperone protein | |
| SF0053 | -2 | 15 | 3.360166 | hypothetical protein | |
| SF0054 | -2 | 15 | 3.325900 | ATP-dependent helicase HepA | |
| SF0055 | 0 | 14 | 3.689127 | DNA polymerase II | |
| SF0056 | 1 | 17 | 4.597826 | L-ribulose-5-phosphate 4-epimerase | |
| SF0058 | 1 | 17 | 4.175727 | ribulokinase | |
| SF0059 | 0 | 17 | 3.436910 | DNA-binding transcriptional regulator AraC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0052 | 56KDTSANTIGN | 29 | 0.023 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0058 | TCRTETOQM | 29 | 0.040 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 2 | SF0097 | SF0112 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0097 | 2 | 12 | 0.083822 | hypothetical protein | |
| SF0098 | 2 | 11 | 0.097954 | DNA gyrase inhibitor | |
| SF0099 | 1 | 13 | 0.327315 | hypothetical protein | |
| SF0100 | 0 | 14 | 0.673955 | dephospho-CoA kinase | |
| SF0101 | -1 | 14 | 0.628366 | guanosine 5'-monophosphate oxidoreductase | |
| SF0103 | 0 | 13 | 0.822046 | type IV pilin biogenesis protein | |
| SF0105 | -2 | 11 | 1.362778 | major pilin subunit | |
| SF0106 | 0 | 18 | 1.328716 | quinolinate phosphoribosyltransferase | |
| SF0107 | 2 | 26 | 1.595336 | N-acetyl-anhydromuranmyl-L-alanine amidase | |
| SF0108 | 3 | 32 | 1.439689 | regulatory protein AmpE | |
| SF0109 | 3 | 36 | 2.097358 | aromatic amino acid transporter | |
| SF0110 | 4 | 37 | 2.251598 | transcriptional regulator PdhR | |
| SF0111 | 3 | 38 | 1.450721 | pyruvate dehydrogenase subunit E1 | |
| SF0112 | 2 | 31 | 1.258206 | pyruvate dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0103 | BCTERIALGSPF | 227 | 5e-73 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0105 | BCTERIALGSPG | 50 | 2e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0112 | RTXTOXIND | 32 | 0.006 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 3 | SF0196 | SF0224 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0196 | -2 | 22 | -3.299178 | biotin synthase | |
| SF0197 | -2 | 17 | -1.149519 | membrane-bound lytic murein transglycosylase D | |
| SF0198 | -1 | 15 | 1.346865 | hydroxyacylglutathione hydrolase | |
| SF0199 | -2 | 16 | 3.419988 | hypothetical protein | |
| SF0201 | -1 | 17 | 3.858923 | RNase HI | |
| SF0200 | 0 | 18 | 4.449188 | DNA polymerase III subunit epsilon | |
| SF0202 | 0 | 18 | 4.740728 | *hypothetical protein | |
| SF0204 | 0 | 21 | 3.057024 | outer membrane usher protein | |
| SF0205 | 4 | 26 | -0.063150 | hypothetical protein | |
| SF0209 | 4 | 27 | -0.163538 | IS2 repressor TnpA | |
| SF0210 | 5 | 26 | -0.083465 | IS2 transposase TnpB | |
| SF0211 | 5 | 28 | -0.765197 | hypothetical protein | |
| SF0215 | 4 | 29 | -0.734343 | terminase large subunit | |
| SF0216 | 5 | 28 | -0.819694 | packaging glycoprotein | |
| SF0217 | 5 | 28 | -0.893762 | scaffolding protein | |
| SF0218 | 5 | 28 | -1.523426 | coat protein | |
| SF0219 | 4 | 29 | -1.754360 | bacteriophage protein | |
| SF0220 | 3 | 29 | -1.359814 | DNA stabilization protein | |
| SF0221 | 4 | 30 | -1.158668 | packaged DNA stabilization protein | |
| SF0222 | 4 | 30 | -0.893847 | packaged DNA stabilization protein | |
| SF0223 | 4 | 30 | -1.043923 | head assembly protein | |
| SF0224 | 3 | 25 | -0.593856 | DNA transfer protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0197 | INTIMIN | 29 | 0.050 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 4 | SF0238 | SF0277 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0238 | 3 | 25 | -3.143797 | hypothetical protein | |
| SF0240 | 5 | 26 | -1.641133 | hypothetical protein | |
| SF0241 | 4 | 27 | -1.444267 | insertion sequence element IS600 protein | |
| SF0242 | 5 | 23 | -1.343562 | insertion sequence element IS600 transposase | |
| SF0243 | 6 | 21 | -1.922138 | hypothetical protein | |
| SF0244 | 3 | 18 | 0.292953 | IS2 transposase TnpB | |
| SF0245 | 0 | 15 | 0.119264 | IS2 repressor TnpA | |
| SF0246 | 0 | 16 | 1.636726 | insertion element IS1 protein InsA | |
| SF0247 | 0 | 17 | 2.111885 | insertion element IS1 protein InsB | |
| SF0248 | -1 | 17 | 2.722726 | hypothetical protein | |
| SF0249 | -1 | 19 | 3.520046 | delta-aminolevulinic acid dehydratase | |
| SF0250 | -1 | 20 | 3.780468 | taurine dioxygenase | |
| SF0251 | 0 | 17 | 0.809468 | taurine ABC transporter permease | |
| SF0252 | 1 | 16 | -0.617462 | taurine ABC transporter ATP-binding subunit | |
| SF0253 | -1 | 14 | -1.708032 | taurine ABC transporter substrate-binding | |
| SF0254 | 1 | 17 | -3.023130 | insertion element IS1 protein InsB | |
| SF0255 | 0 | 19 | -3.170776 | insertion element IS1 protein InsA | |
| SF0256 | 1 | 17 | -3.115466 | hypothetical protein | |
| SF0258 | 0 | 19 | -2.742550 | transporter | |
| SF0259 | 1 | 23 | -4.864189 | hypothetical protein | |
| SF0260 | 2 | 16 | -2.465124 | dehydrogenase subunit | |
| SF0261 | 3 | 18 | -2.115424 | insertion element IS1 protein InsA | |
| SF0262 | 3 | 21 | 1.342082 | insertion element IS1 protein InsB | |
| SF0263 | 4 | 23 | 1.845534 | hypothetical protein | |
| SF0264 | 3 | 23 | 3.212853 | hypothetical protein | |
| SF0265 | 3 | 23 | 4.023913 | Rhs-family protein | |
| SF0266 | 0 | 23 | 4.555362 | Rhs-family protein | |
| SF0267 | -1 | 23 | 4.242567 | Rhs-family protein | |
| SF0268 | -1 | 18 | 2.668470 | Rhs-family protein | |
| SF0269 | -1 | 16 | 1.690537 | C-N hydrolase amidase | |
| SF0270 | 0 | 15 | 0.726731 | C-lysozyme inhibitor | |
| SF0271 | 0 | 20 | 2.348377 | acyl-CoA dehydrogenase | |
| SF0272 | 2 | 21 | 1.278952 | phosphoheptose isomerase | |
| SF0273 | 1 | 21 | 1.651540 | amidotransferase | |
| SF0274 | 1 | 21 | 0.934893 | hypothetical protein | |
| SF0276 | 3 | 19 | 0.705745 | hypothetical protein | |
| SF0278 | 2 | 19 | 0.551789 | flagellar biosynthetic protein FlhA | |
| SF0277 | 2 | 19 | -1.908227 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0249 | BINARYTOXINB | 30 | 0.019 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0265 | CHANLCOLICIN | 30 | 0.027 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0277 | OMPADOMAIN | 38 | 2e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 5 | SF0294 | SF0331 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0294 | 3 | 31 | -4.593352 | *phage integrase | |
| SF0295 | 4 | 29 | -3.773785 | insertion sequence element IS600 protein | |
| SF0296 | 7 | 33 | -5.059076 | insertion sequence element IS600 transposase | |
| SF0297 | 4 | 28 | -3.773785 | phage integrase | |
| SF0298 | 3 | 27 | -3.730189 | hypothetical protein | |
| SF0299 | 4 | 28 | -5.084356 | bacteriophage protein | |
| SF0301 | 4 | 37 | -10.322922 | insertion sequence element IS629 protein | |
| SF0302 | 5 | 38 | -10.345700 | insertion sequence element IS600 transposase | |
| SF0303 | 5 | 41 | -12.396150 | insertion sequence element IS600 protein | |
| SF0305 | 5 | 46 | -14.162129 | flippase | |
| SF0306 | 4 | 44 | -13.007783 | bactoprenol glucosyl transferase | |
| SF0307 | 4 | 40 | -11.772013 | glucosyl transferase II | |
| SF0308 | 3 | 34 | -8.626898 | hypothetical protein | |
| SF0309 | 1 | 35 | -8.203724 | hypothetical protein | |
| SF0310 | 1 | 36 | -7.937026 | phage tail fiber protein | |
| SF0311 | 1 | 34 | -6.338940 | bacteriophage protein | |
| SF0312 | 2 | 35 | -6.887847 | insertion sequence element IS600 protein | |
| SF0313 | 2 | 35 | -7.442478 | insertion sequence element IS600 transposase | |
| SF0314 | 0 | 29 | -5.473777 | phage integrase | |
| SF0315 | 0 | 22 | -4.090766 | hypothetical protein | |
| SF0317 | -1 | 14 | 1.099912 | insertion sequence element IS600 protein | |
| SF0318 | 1 | 17 | 1.353678 | insertion sequence element IS600 transposase | |
| SF0320 | 1 | 16 | 1.681689 | insertion sequence element IS629 protein | |
| SF0321 | 0 | 17 | 0.373519 | diguanylate cyclase AdrA | |
| SF0322 | 0 | 17 | -0.227169 | pyrroline-5-carboxylate reductase | |
| SF0323 | 0 | 24 | -1.573728 | hypothetical protein | |
| SF0324 | -1 | 28 | -3.951188 | shikimate kinase II | |
| SF0325 | -1 | 22 | -3.558235 | hypothetical protein | |
| SF0326 | -1 | 21 | -2.007433 | hypothetical protein | |
| SF0327 | 1 | 21 | -1.262957 | hypothetical protein | |
| SF0328 | 3 | 18 | 0.192482 | hypothetical protein | |
| SF0329 | 2 | 15 | 0.459838 | hypothetical protein | |
| SF0331 | 2 | 16 | 1.074005 | recombination associated protein |
| 6 | SF0358 | SF0381 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0358 | -1 | 19 | -4.992048 | geranyltranstransferase | |
| SF0359 | 1 | 29 | -9.896159 | exodeoxyribonuclease VII small subunit | |
| SF0361 | 1 | 29 | -9.534820 | oxidative-stress-resistance chaperone | |
| SF0362 | 1 | 32 | -10.533232 | 2-dehydropantoate 2-reductase | |
| SF0363 | 2 | 29 | -10.270877 | nucleotide-binding protein | |
| SF0364 | 3 | 30 | -10.446358 | hypothetical protein | |
| SF0365 | 1 | 20 | -6.868978 | hypothetical protein | |
| SF0366 | 2 | 25 | 0.978887 | insertion element IS1 protein InsB | |
| SF0368 | 2 | 25 | 0.391557 | hypothetical protein | |
| SF0369 | 1 | 20 | 1.247415 | protoheme IX farnesyltransferase | |
| SF0370 | 0 | 18 | 0.768325 | cytochrome o ubiquinol oxidase subunit IV | |
| SF0371 | -1 | 18 | 0.621607 | cytochrome o ubiquinol oxidase subunit III | |
| SF0375 | -1 | 18 | 0.062459 | insertion sequence element ISSfl4 ORF2 | |
| SF0376 | 1 | 18 | -0.540938 | insertion sequence element ISSfl4 transposase | |
| SF0377 | 0 | 18 | -0.427346 | muropeptide transporter | |
| SF0378 | 2 | 27 | -1.271972 | polymerase/proteinase | |
| SF0379 | 4 | 25 | -0.620596 | murein genes regulator | |
| SF0380 | 3 | 27 | -0.536111 | hypothetical protein | |
| SF0381 | 3 | 26 | -0.201769 | trigger factor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0377 | TCRTETA | 39 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0378 | PF06291 | 29 | 0.006 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| 7 | SF0399 | SF0415 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0399 | 2 | 19 | -1.913404 | insertion sequence IS4 transposase InsG | |
| SF0400 | 2 | 18 | -4.566848 | hypothetical protein | |
| SF0401 | 0 | 13 | -1.778675 | hypothetical protein | |
| SF0402 | 0 | 13 | -1.174100 | hypothetical protein | |
| SF0403 | 2 | 16 | -0.959059 | hypothetical protein | |
| SF0405 | 0 | 15 | -0.426251 | gene expression modulator | |
| SF0406 | 0 | 14 | -0.230555 | Hha toxicity attenuator | |
| SF0407 | 0 | 15 | 0.662550 | multidrug efflux system protein AcrB | |
| SF0408 | 1 | 12 | 0.072911 | multidrug efflux system transporter AcrA | |
| SF0409 | 1 | 14 | -0.116117 | DNA-binding transcriptional repressor AcrR | |
| SF0410 | 2 | 14 | 2.052489 | hypothetical protein | |
| SF0411 | 4 | 16 | 3.771721 | hypothetical protein | |
| SF0412 | 3 | 16 | 4.335160 | primosomal replication protein N'' | |
| SF0413 | 3 | 22 | 2.836400 | hypothetical protein | |
| SF0414 | 3 | 26 | 2.660582 | adenine phosphoribosyltransferase | |
| SF0415 | 2 | 22 | 2.697059 | DNA polymerase III subunits gamma and tau |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0402 | BCTERIALGSPF | 30 | 0.026 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0407 | ACRIFLAVINRP | 1361 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0408 | RTXTOXIND | 45 | 3e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0409 | HTHTETR | 222 | 5e-76 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0410 | RTXTOXIND | 32 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0415 | IGASERPTASE | 39 | 7e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 8 | SF0450 | SF0463 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0450 | 1 | 18 | 3.345734 | hydantoin utilization protein | |
| SF0451 | 1 | 17 | 3.485788 | carboxylase | |
| SF0452 | 0 | 19 | 3.154112 | carbamate kinase | |
| SF0453 | 2 | 19 | 2.489583 | phosphoribosylaminoimidazole carboxylase ATPase | |
| SF0454 | 3 | 20 | 1.984273 | phosphoribosylaminoimidazole carboxylase | |
| SF0455 | 3 | 19 | 1.444524 | UDP-2,3-diacylglucosamine hydrolase | |
| SF0456 | 2 | 17 | -0.016283 | peptidyl-prolyl cis-trans isomerase B | |
| SF0457 | 0 | 14 | -0.952581 | cysteinyl-tRNA synthetase | |
| SF0458 | -1 | 22 | -3.648959 | hypothetical protein | |
| SF0459 | -2 | 21 | -3.828676 | hypothetical protein | |
| SF0460 | -1 | 22 | -3.866001 | bifunctional 5,10-methylene-tetrahydrofolate | |
| SF0461 | 1 | 30 | -6.722345 | type-1 fimbrial protein subunit A | |
| SF0462 | -1 | 26 | -6.387994 | fimbrial chaperone protein FimC | |
| SF0463 | 0 | 21 | -4.058715 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0452 | CARBMTKINASE | 385 | e-137 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0457 | RTXTOXIND | 29 | 0.031 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0463 | PF00577 | 133 | 9e-39 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 9 | SF0483 | SF0528 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0483 | 0 | 19 | -3.921053 | transporter | |
| SF0484 | 1 | 22 | -3.137377 | insertion element iso-IS10R transposase | |
| SF0486 | 1 | 20 | -1.264712 | hypothetical protein | |
| SF0487 | 2 | 19 | -0.904606 | hypothetical protein | |
| SF0488 | 4 | 24 | -2.687705 | gamma-glutamyl:cysteine ligase | |
| SF0489 | 7 | 31 | -3.933203 | insertion element IS150 protein | |
| SF0490 | 5 | 29 | -3.589185 | insertion sequence element IS600 protein | |
| SF0492 | 2 | 16 | -1.205173 | insertion sequence element IS629 protein | |
| SF0493 | 0 | 14 | -0.639767 | insertion sequence element IS600 transposase | |
| SF0494 | -2 | 10 | 1.617217 | insertion element IS150 protein InsB | |
| SF0494a | -2 | 11 | 2.681751 | hypothetical protein | |
| SF0495 | -2 | 10 | 2.682977 | enterobactin synthase multienzyme complex | |
| SF0496 | -2 | 11 | 3.039275 | outer membrane receptor FepA | |
| SF0497 | 0 | 13 | 3.742899 | enterobactin/ferric enterobactin esterase | |
| SF0498 | 0 | 14 | 4.651064 | enterobactin synthase subunit F | |
| SF0499 | 1 | 14 | 4.893856 | insertion element IS1 protein InsA | |
| SF0500 | 1 | 15 | 4.958568 | insertion element IS1 protein InsB | |
| SF0502 | 1 | 17 | 5.062131 | iron-enterobactin ABC transporter ATP-binding | |
| SF0503 | 1 | 17 | 5.212540 | iron-enterobactin ABC transporter permease | |
| SF0504 | 0 | 17 | 5.068700 | iron-enterobactin ABC transporter permease | |
| SF0505 | 0 | 18 | 4.504594 | enterobactin exporter EntS | |
| SF0506 | -1 | 20 | 4.574070 | iron-enterobactin ABC transporter | |
| SF0508 | -1 | 21 | 4.514306 | enterobactin synthase subunit E | |
| SF0509 | 0 | 19 | 4.404245 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | |
| SF0510 | -1 | 17 | 4.055559 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | |
| SF0511 | 0 | 16 | 3.639950 | thioesterase | |
| SF0512 | -1 | 14 | 2.885293 | carbon starvation protein A | |
| SF0513 | -2 | 15 | 1.341238 | hypothetical protein | |
| SF0514 | -1 | 15 | 0.875271 | oxidoreductase | |
| SF0515 | 0 | 20 | -2.779145 | methionine aminotransferase | |
| SF0516 | 2 | 24 | -4.753859 | insertion sequence element IS911 integrase core | |
| SF0517 | 2 | 22 | -6.009050 | insertion sequence element IS911 transposase | |
| SF0519 | 0 | 16 | -3.899543 | hypothetical protein | |
| SF0520 | -1 | 15 | -3.826682 | hypothetical protein | |
| SF0522 | -1 | 15 | -3.650625 | LysR family transcriptional regulator | |
| SF0523 | -1 | 17 | -1.393085 | thiol:disulfide interchange protein | |
| SF0524 | -1 | 19 | -0.605379 | alkyl hydroperoxide reductase | |
| SF0525 | -1 | 15 | 0.158397 | alkyl hydroperoxide reductase | |
| SF0526 | -2 | 15 | 1.190460 | universal stress protein UspG | |
| SF0527 | -1 | 15 | 2.064341 | oxidoreductase | |
| SF0528 | -2 | 20 | 3.081154 | nucleoside diphosphate kinase regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0494a | HOKGEFTOXIC | 56 | 2e-15 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0495 | ENTSNTHTASED | 275 | 7e-97 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0505 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0506 | FERRIBNDNGPP | 63 | 2e-13 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0509 | ISCHRISMTASE | 444 | e-161 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0510 | DHBDHDRGNASE | 359 | e-129 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0519 | HTHFIS | 27 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0523 | BCTLIPOCALIN | 28 | 0.019 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| 10 | SF0553 | SF0558 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0553 | 3 | 18 | -0.947394 | nicotinamide riboside transporter PnuC | |
| SF0554 | 3 | 20 | -0.523029 | quinolinate synthetase | |
| SF0555 | 3 | 21 | -0.448391 | ***tol-pal system protein YbgF | |
| SF0556 | 3 | 22 | -0.218602 | peptidoglycan-associated outer membrane | |
| SF0557 | 3 | 18 | -0.285670 | translocation protein TolB | |
| SF0558 | 3 | 18 | -0.163512 | cell envelope integrity inner membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0556 | OMPADOMAIN | 116 | 5e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0558 | IGASERPTASE | 64 | 7e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 11 | SF0587 | SF0594 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0587 | 0 | 18 | 3.640064 | metal-binding protein | |
| SF0588 | 0 | 20 | 3.707474 | dipeptide/tripeptide permease D | |
| SF0589 | 1 | 24 | 4.443331 | deoxyribodipyrimidine photolyase | |
| SF0590 | 2 | 28 | 5.227796 | hypothetical protein | |
| SF0591 | 2 | 25 | 5.117722 | hypothetical protein | |
| SF0594 | 2 | 20 | 3.942275 | Rhs-family protein |
| 12 | SF0668 | SF0725 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0668 | 2 | 20 | 1.258899 | bacteriophage protein | |
| SF0669 | 1 | 20 | 0.809325 | bacteriophage protein | |
| SF0670 | 0 | 22 | -0.641663 | bacteriophage protein | |
| SF0672 | 0 | 26 | -2.288490 | IS2 transposase TnpB | |
| SF0673 | 1 | 25 | -2.608808 | IS2 repressor TnpA | |
| SF0674 | 0 | 26 | -3.377296 | bacteriophage protein | |
| SF0675 | 2 | 28 | -2.615706 | bacteriophage protein | |
| SF0676 | 2 | 27 | -3.258591 | hypothetical protein | |
| SF0677 | 3 | 27 | -1.854728 | insertion sequence element IS911 transposase | |
| SF0678 | 4 | 29 | -0.797993 | insertion sequence element IS911 integrase core | |
| SF0679 | 3 | 27 | -1.832913 | bacteriophage protein | |
| SF0680 | 3 | 25 | -1.273306 | ****insertion sequence element IS600 protein | |
| SF0681 | 3 | 22 | -0.947394 | insertion sequence element IS600 transposase | |
| SF0682 | 3 | 22 | -0.768209 | bacteriophage protein | |
| SF0683 | 3 | 21 | -0.625677 | insertion sequence element IS911 integrase core | |
| SF0685 | 4 | 23 | -1.415802 | insertion sequence element IS911 transposase | |
| SF0684 | 4 | 23 | -1.474952 | replication protein DnaC | |
| SF0686 | 3 | 23 | -1.377119 | helicase | |
| SF0687 | 2 | 25 | -1.966179 | bacteriophage protein | |
| SF0688 | 1 | 26 | -2.432706 | Q protein | |
| SF0689 | 3 | 25 | -1.738282 | ****S protein | |
| SF0690 | 2 | 24 | -1.676088 | bacteriophage protein | |
| SF0691 | 1 | 25 | -1.675575 | endolysin R of prophage CP-933V | |
| SF0692 | 1 | 22 | 1.711351 | endopeptidase | |
| SF0693 | 1 | 22 | 2.086860 | insertion sequence element IS600 transposase | |
| SF0696 | 1 | 23 | 2.598586 | insertion sequence element IS629 protein | |
| SF0697 | 2 | 25 | 2.717244 | insertion sequence element IS600 protein | |
| SF0698 | 2 | 26 | 3.128519 | DNA packaging protein of prophage; terminase | |
| SF0703 | 4 | 26 | 3.886732 | head-tail preconnector gp5 | |
| SF0704 | 4 | 28 | 2.195188 | capsid protein small subunit | |
| SF0705 | 5 | 23 | 2.187578 | major capsid protein | |
| SF0706 | 6 | 26 | 1.987057 | DNA-packaging protein | |
| SF0707 | 7 | 25 | 2.119718 | tail attachment protein | |
| SF0708 | 3 | 25 | 3.173115 | prophage CP-933K tail protein | |
| SF0709 | 3 | 26 | 3.034424 | prophage CP-933K tail protein | |
| SF0710 | 2 | 25 | 3.314015 | prophage CP-933K tail protein | |
| SF0711 | 4 | 29 | 3.812387 | prophage CP-933K tail protein | |
| SF0712 | 3 | 28 | 4.154077 | prophage CP-933K tail protein | |
| SF0713 | 2 | 26 | 4.085454 | tail length tape measure protein | |
| SF0714 | 5 | 26 | 4.346588 | minor tail protein | |
| SF0715 | 5 | 25 | 4.276964 | minor tail protein | |
| SF0716 | 4 | 20 | 2.833348 | tail assembly protein | |
| SF0717 | 2 | 16 | 2.267265 | phage tail protein | |
| SF0718 | 1 | 13 | 2.222138 | host specificity protein | |
| SF0719 | -1 | 11 | 1.386845 | membrane protein | |
| SF0721 | 0 | 11 | 2.047039 | prophage CP-933K tail protein | |
| SF0722 | 0 | 12 | 2.345009 | invasion plasmid antigen | |
| SF0723 | 2 | 15 | 3.657055 | kinase inhibitor protein | |
| SF0725 | -1 | 13 | 3.217294 | 7,8-diaminopelargonic acid synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0682 | PF05272 | 54 | 2e-09 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0688 | FIMREGULATRY | 27 | 0.014 | Escherichia coli: P pili regulatory PapB protein si... | |
>FIMREGULATRY#Escherichia coli: P pili regulatory PapB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0713 | RTXTOXIND | 40 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0719 | ENTEROVIROMP | 134 | 2e-42 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| 13 | SF0815 | SF0820 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0815 | 0 | 16 | -6.244721 | arginine transporter permease subunit ArtM | |
| SF0816 | -2 | 18 | -6.706681 | arginine transporter permease subunit ArtQ | |
| SF0817 | -1 | 17 | -6.230199 | arginine ABC transporter substrate-binding | |
| SF0818 | 1 | 15 | -5.072567 | arginine transporter ATP-binding subunit | |
| SF0819 | 1 | 16 | -3.864914 | lipoprotein | |
| SF0820 | 1 | 14 | -3.037396 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0818 | PF05272 | 30 | 0.010 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 14 | SF0857 | SF0895 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0857 | 2 | 21 | 0.082210 | MFS family transporter protein | |
| SF0858 | 3 | 24 | 0.104899 | insertion sequence element ISSfl4 transposase | |
| SF0859 | 3 | 22 | -0.006359 | insertion sequence element ISSfl4 ORF2 | |
| SF0860 | 3 | 23 | -0.552974 | insertion sequence element ISSfl4 transposase | |
| SF0862 | 2 | 24 | -1.197716 | insertion sequence element IS911 integrase core | |
| SF0863 | 1 | 29 | -3.873105 | insertion sequence element IS911 transposase | |
| SF0864 | 1 | 31 | -3.276024 | bacteriophage protein | |
| SF0865 | 1 | 28 | -3.529681 | insertion sequence element IS600 transposase | |
| SF0866 | 2 | 28 | -3.821874 | insertion sequence element IS600 protein | |
| SF0867 | 2 | 28 | -4.225263 | bacteriophage protein | |
| SF0868 | 4 | 30 | -4.765510 | hypothetical protein | |
| SF0868a | 3 | 25 | -2.998828 | hypothetical protein | |
| SF0869 | 2 | 24 | -3.049100 | hypothetical protein | |
| SF0870a | 5 | 27 | -3.648398 | hypothetical protein | |
| SF0871 | 4 | 25 | -3.042219 | bacteriophage protein | |
| SF0873 | 1 | 26 | -1.317527 | bacteriophage protein | |
| SF0874 | 0 | 25 | -0.388160 | bacteriophage protein | |
| SF0875 | 2 | 24 | -1.224654 | DNA-binding transcriptional regulator DicC | |
| SF0876 | 3 | 24 | -1.513960 | transcriptional repressor DicA | |
| SF0877 | 2 | 25 | -0.712388 | hypothetical protein | |
| SF0878 | 2 | 24 | -0.831981 | IS2 transposase TnpB | |
| SF0879 | 3 | 26 | -1.805106 | IS2 repressor TnpA | |
| SF0880 | 3 | 25 | -2.189440 | bacteriophage protein | |
| SF0881 | 3 | 23 | -1.508431 | insertion sequence element IS600 transposase | |
| SF0882 | 3 | 18 | -0.269338 | insertion sequence element IS600 protein | |
| SF0883 | 0 | 15 | -0.863982 | exodeoxyribonuclease VIII | |
| SF0884 | 2 | 12 | -0.929293 | insertion sequence element IS600 protein | |
| SF0885 | 1 | 13 | -0.815287 | insertion sequence element IS600 transposase | |
| SF0886 | 2 | 13 | -0.263718 | bacteriophage protein | |
| SF0888 | 2 | 12 | -0.448017 | 6-phosphogluconolactonase | |
| SF0890 | 1 | 12 | -1.109663 | hypothetical protein | |
| SF0891 | 1 | 13 | -0.940110 | membrane pump protein | |
| SF0892 | 1 | 25 | -0.805226 | hydratase | |
| SF0893 | 4 | 30 | -1.228171 | acyl-CoA thioesterase | |
| SF0895 | 2 | 28 | -1.615711 | insertion sequence element IS600 protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0860 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0868a | HOKGEFTOXIC | 62 | 4e-17 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
| 15 | SF0933 | SF0943 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0933 | 2 | 17 | 1.221325 | IS2 repressor TnpA | |
| SF0934 | 0 | 15 | 1.430887 | alkanesulfonate monooxygenase | |
| SF0935 | 1 | 21 | -0.000630 | hypothetical protein | |
| SF0936 | 1 | 18 | -2.503137 | NAD(P)H-dependent FMN reductase | |
| SF0937 | 2 | 21 | -3.270825 | hypothetical protein | |
| SF0938 | 1 | 21 | -3.209167 | insertion element IS1 protein InsA | |
| SF0939 | 1 | 22 | -3.573429 | insertion element IS1 protein InsB | |
| SF0940 | 0 | 23 | -3.549669 | insertion element IS1 protein InsA | |
| SF0941 | 0 | 21 | -4.002465 | outer membrane usher protein | |
| SF0942 | 0 | 22 | -3.693335 | FimH-like protein | |
| SF0943 | 0 | 21 | -3.184551 | fimbrial-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0941 | PF00577 | 822 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 16 | SF0997 | SF1010 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0997 | -1 | 18 | -5.045086 | trimethylamine N-oxide reductase cytochrome | |
| SF1001 | 0 | 18 | -4.986060 | insertion element IS1 protein InsB | |
| SF1002 | -1 | 20 | -5.529892 | insertion element IS1 protein InsA | |
| SF1003 | 0 | 18 | -4.896908 | chaperone-modulator protein CbpM | |
| SF1004 | 1 | 17 | -3.532256 | curved DNA-binding protein CbpA | |
| SF1005 | 0 | 16 | -3.243431 | hypothetical protein | |
| SF1006 | 1 | 15 | 1.959766 | glucose-1-phosphatase/inositol phosphatase | |
| SF1007 | 0 | 17 | 3.408927 | hypothetical protein | |
| SF1008 | 1 | 17 | 3.737248 | NAD(P)H:quinone oxidoreductase | |
| SF1009 | -1 | 18 | 3.944948 | transporter | |
| SF1010 | -2 | 18 | 4.178884 | hypothetical protein |
| 17 | SF1024 | SF1062 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1024 | 0 | 20 | -4.831507 | insertion sequence IS3 transposase InsE | |
| SF1026 | 0 | 22 | -5.427110 | hypothetical protein | |
| SF1028 | 0 | 22 | -4.848761 | *hydrolase | |
| SF1029 | 1 | 25 | -5.668549 | oxidoreductase subunit | |
| SF1030 | 2 | 29 | -6.836093 | hypothetical protein | |
| SF1032 | 2 | 36 | -8.470629 | insertion element iso-IS10R transposase | |
| SF1033 | 2 | 37 | -9.144447 | curli assembly protein CsgE | |
| SF1034 | 3 | 35 | -7.318364 | DNA-binding transcriptional regulator CsgD | |
| SF1035 | 1 | 28 | -4.171176 | curlin minor subunit CsgB | |
| SF1037 | 1 | 26 | -4.676040 | insertion sequence element IS600 transposase | |
| SF1039 | 0 | 17 | -3.958880 | curli assembly protein CsgC | |
| SF1040 | -2 | 12 | -1.505186 | hypothetical protein | |
| SF1041 | -1 | 13 | -0.692579 | RNase III inhibitor | |
| SF1042 | -2 | 13 | -0.741078 | synthase | |
| SF1043 | -1 | 11 | -0.432740 | glucans biosynthesis protein | |
| SF1044 | 0 | 13 | 0.674650 | glucan biosynthesis protein G | |
| SF1045 | 1 | 15 | 1.816980 | glucosyltransferase MdoH | |
| SF1046 | 4 | 22 | -0.253774 | insertion sequence IS91 transposase | |
| SF1048 | 4 | 24 | -1.585492 | insertion sequence IS91 protein | |
| SF1050 | 3 | 26 | -0.309206 | insertion sequence element IS629 protein | |
| SF1051 | 3 | 26 | -0.339263 | insertion sequence element IS911 transposase | |
| SF1052 | 4 | 26 | -0.169086 | insertion sequence element IS911 integrase core | |
| SF1053 | 4 | 27 | -1.120583 | bacteriophage protein | |
| SF1054 | 5 | 29 | -1.912813 | IS2 repressor TnpA | |
| SF1055 | 2 | 22 | -1.377830 | IS2 transposase TnpB | |
| SF1056 | -1 | 18 | -2.581354 | insertion sequence element IS629 protein | |
| SF1058 | -1 | 16 | -3.277791 | insertion sequence element IS600 transposase | |
| SF1059 | -2 | 16 | -2.859764 | insertion sequence element IS600 protein | |
| SF1060 | -3 | 14 | -3.520401 | bacteriophage protein | |
| SF1061 | 2 | 17 | -1.455709 | lipid A biosynthesis lauroyl acyltransferase | |
| SF1062 | 2 | 19 | -2.211515 | rhodanese-related sulfurtransferase |
| 18 | SF1153 | SF1157 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1153 | 0 | 17 | -4.537609 | phosphohydrolase | |
| SF1154 | 1 | 19 | -4.844657 | 23S rRNA pseudouridine synthase E | |
| SF1155 | 1 | 19 | -5.442807 | isocitrate dehydrogenase | |
| SF1156 | 1 | 26 | -5.996037 | hypothetical protein | |
| SF1156a | 2 | 27 | -5.098725 | membrane protein | |
| SF1156b | 1 | 26 | -4.813489 | ATPase | |
| SF1157 | 0 | 21 | -3.992097 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1157 | PRTACTNFAMLY | 98 | 4e-23 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 19 | SF1247 | SF1261 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1247 | 0 | 17 | -3.118544 | oligopeptide ABC transporter ATP-binding protein | |
| SF1248 | -1 | 18 | -3.163896 | oligopeptide ABC transporter ATP-binding protein | |
| SF1249 | -1 | 19 | -3.844260 | hypothetical protein | |
| SF1250 | -2 | 21 | -2.869140 | cardiolipin synthetase | |
| SF1251 | -2 | 23 | -3.928429 | voltage-gated potassium channel | |
| SF1252 | 1 | 20 | -1.806226 | insertion sequence element IS600 transposase | |
| SF1253 | 1 | 16 | -1.613042 | insertion sequence element IS600 integrase core | |
| SF1254 | 2 | 17 | -2.037302 | hypothetical protein | |
| SF1255 | 0 | 19 | -3.300294 | transporter | |
| SF1256 | 0 | 23 | -5.550977 | acyl-CoA esterase | |
| SF1257 | 0 | 23 | -5.669049 | intracellular septation protein A | |
| SF1258 | 0 | 21 | -3.856050 | hypothetical protein | |
| SF1259 | 0 | 16 | -2.097523 | outer membrane protein W | |
| SF1260 | 1 | 14 | -1.399794 | hypothetical protein | |
| SF1261 | 2 | 12 | 1.055583 | structural protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1248 | HTHFIS | 31 | 0.008 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1254 | adhesinmafb | 31 | 4e-04 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1255 | TONBPROTEIN | 256 | 2e-88 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 20 | SF1302 | SF1323 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1302 | -1 | 16 | 3.405735 | glutamine synthetase | |
| SF1303 | 0 | 16 | 3.406680 | gamma-glutamyl-gamma-aminobutyrate hydrolase | |
| SF1304 | 1 | 17 | 3.100481 | DNA-binding transcriptional repressor PuuR | |
| SF1305 | 2 | 18 | 3.176626 | gamma-glutamyl-gamma-aminobutyraldehyde | |
| SF1306 | 1 | 16 | 2.122730 | oxidoreductase | |
| SF1307 | 3 | 14 | 0.924294 | 4-aminobutyrate aminotransferase | |
| SF1308 | 2 | 13 | -1.244210 | psp operon transcriptional activator | |
| SF1309 | 2 | 14 | -1.578862 | phage shock protein PspA | |
| SF1310 | -1 | 15 | 0.132645 | phage shock protein B | |
| SF1311 | -2 | 19 | 0.636716 | DNA-binding transcriptional activator PspC | |
| SF1312 | -1 | 21 | 1.772920 | peripheral inner membrane phage-shock protein | |
| SF1313 | 0 | 17 | 1.678634 | thiosulfate:cyanide sulfurtransferase | |
| SF1315 | 0 | 17 | 2.188488 | insertion element IS1 protein InsA | |
| SF1317 | 1 | 19 | 1.775339 | binding-protein dependent transport protein | |
| SF1318 | 2 | 17 | 0.524958 | transport system permease | |
| SF1319 | 3 | 16 | 0.966570 | oxidoreductase | |
| SF1322 | 3 | 16 | 0.969729 | hypothetical protein | |
| SF1323 | 2 | 17 | 0.526504 | beta-phosphoglucomutase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1308 | HTHFIS | 342 | e-117 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1310 | MPTASEINHBTR | 25 | 0.041 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| 21 | SF1333 | SF1383 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1333 | 2 | 26 | -1.599270 | hypothetical protein | |
| SF1334 | 1 | 23 | 0.440718 | hypothetical protein | |
| SF1335 | 2 | 25 | 0.812405 | insertion sequence element ISSfl2 transposase | |
| SF1337 | 0 | 22 | -0.461292 | hypothetical protein | |
| SF1339 | 2 | 25 | 0.223102 | insertion sequence element IS600 protein | |
| SF1340 | 1 | 26 | -0.415673 | insertion sequence element IS600 transposase | |
| SF1342 | 0 | 27 | -1.013843 | IS2 transposase TnpB | |
| SF1343 | 0 | 26 | -2.937666 | IS2 repressor TnpA | |
| SF1344 | -1 | 22 | -3.224364 | DnaC-like chromosome replication protein | |
| SF1345 | 0 | 28 | -4.778419 | bacteriophage protein | |
| SF1346 | 1 | 29 | -5.126863 | bacteriophage protein | |
| SF1347 | 1 | 28 | -5.753831 | hypothetical protein | |
| SF1348 | 1 | 27 | -3.711727 | hypothetical protein | |
| SF1349 | 2 | 26 | -3.090882 | hypothetical protein | |
| SF1350 | 2 | 25 | -3.029782 | hypothetical protein | |
| SF1350a | 0 | 25 | -2.697768 | regulatory protein | |
| SF1350b | 0 | 25 | -2.977897 | hypothetical protein | |
| SF1351 | -1 | 23 | -2.234612 | insertion element IS1 protein InsB | |
| SF1352 | 0 | 24 | -2.112918 | insertion element IS1 protein InsA | |
| SF1353 | 1 | 22 | -2.177501 | bacteriophage protein | |
| SF1354 | 2 | 24 | -0.718987 | bacteriophage protein | |
| SF1355 | 3 | 24 | -0.513358 | bacteriophage protein | |
| SF1356 | 3 | 23 | -0.585689 | insertion sequence element IS600 transposase | |
| SF1357 | 4 | 21 | -0.193087 | insertion sequence element IS600 protein | |
| SF1359 | 3 | 20 | -0.164940 | tail fiber assembly protein | |
| SF1360 | 3 | 20 | -0.697638 | tail fiber protein | |
| SF1361 | 1 | 18 | -1.293983 | hypothetical protein | |
| SF1362 | 1 | 20 | -1.386542 | iron transporter inner membrane protein | |
| SF1363 | 1 | 19 | -0.508725 | iron ABC transporter permease | |
| SF1364 | 1 | 21 | -0.315310 | iron ABC transporter ATP-binding protein | |
| SF1365 | 0 | 19 | -1.543298 | iron ABC transporter substrate-binding protein | |
| SF1366 | 1 | 20 | -1.119661 | insertion element IS1 protein InsA | |
| SF1367 | 1 | 20 | -1.451071 | insertion element IS1 protein InsB | |
| SF1370 | 2 | 22 | -2.381125 | insertion sequence element IS629 integrase core | |
| SF1371 | 2 | 23 | -3.708678 | insertion sequence element IS629 protein | |
| SF1372 | 0 | 22 | -2.675053 | bacteriophage protein | |
| SF1373 | 1 | 23 | -1.909146 | host-nuclease inhibitor protein Gam | |
| SF1375 | 1 | 21 | -1.350230 | exodeoxyribonuclease VIII | |
| SF1376 | 5 | 25 | -2.019643 | hypothetical protein | |
| SF1377 | 5 | 25 | -1.070304 | FtsZ inhibitor protein | |
| SF1378 | 5 | 26 | -0.594299 | IS2 transposase TnpB | |
| SF1379 | 6 | 26 | -1.863961 | IS2 repressor TnpA | |
| SF1382 | 6 | 25 | -2.007433 | hypothetical protein | |
| SF1383 | 3 | 22 | -1.910970 | invasion plasmid antigen |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1350a | HOKGEFTOXIC | 65 | 2e-18 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1365 | adhesinb | 332 | e-116 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| 22 | SF1435 | SF1452 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1435 | 2 | 16 | -1.015169 | hypothetical protein | |
| SF1436 | 2 | 19 | -1.703297 | hypothetical protein | |
| SF1437 | 1 | 16 | -1.385542 | hypothetical protein | |
| SF1439 | 2 | 21 | -1.497681 | insertion sequence element IS600 transposase | |
| SF1440 | 2 | 21 | -1.434212 | insertion sequence element IS600 protein | |
| SF1441 | 0 | 23 | -1.897058 | hypothetical protein | |
| SF1442 | 0 | 20 | -2.291073 | aldehyde reductase | |
| SF1443 | -1 | 17 | -2.554697 | hypothetical protein | |
| SF1444 | -1 | 19 | -3.604781 | glyceraldehyde-3-phosphate dehydrogenase | |
| SF1445 | 0 | 23 | -4.614453 | methionine sulfoxide reductase B | |
| SF1446 | 1 | 22 | -4.584942 | hypothetical protein | |
| SF1447 | 0 | 22 | -5.131907 | oxidoreductase | |
| SF1448 | 1 | 24 | -6.003252 | transporter | |
| SF1450 | 1 | 23 | -5.926327 | aldolase | |
| SF1451 | 1 | 20 | -4.851244 | kinase | |
| SF1452 | -1 | 14 | -3.191404 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1435 | PRTACTNFAMLY | 28 | 0.022 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1443 | INVEPROTEIN | 29 | 0.021 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1448 | TCRTETB | 29 | 0.041 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 23 | SF1479 | SF1498 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1479 | 2 | 13 | 2.548248 | arginine succinyltransferase | |
| SF1480 | 1 | 13 | 1.286914 | aldehyde dehydrogenase | |
| SF1482 | 0 | 15 | -0.904676 | succinylglutamate desuccinylase | |
| SF1483 | 1 | 17 | -2.269213 | periplasmic protein | |
| SF1484 | 2 | 17 | -2.449088 | hypothetical protein | |
| SF1485 | 1 | 18 | -2.878171 | nucleotide excision repair endonuclease | |
| SF1486 | 0 | 16 | -2.969776 | NAD synthetase | |
| SF1487 | 1 | 16 | -2.551449 | DNA-binding transcriptional activator OsmE | |
| SF1488 | 0 | 16 | -3.502368 | PTS system N,N'-diacetylchitobiose-specific | |
| SF1489 | 0 | 15 | -2.843553 | PTS system N,N'-diacetylchitobiose-specific | |
| SF1490 | -2 | 12 | -1.942582 | PTS system N,N'-diacetylchitobiose-specific | |
| SF1492 | -2 | 11 | -1.743780 | insertion element IS1 protein InsB | |
| SF1493 | -1 | 16 | -3.873039 | insertion element IS1 protein InsA | |
| SF1494 | -1 | 15 | -3.782325 | cryptic phospho-beta-glucosidase | |
| SF1495 | 0 | 17 | -3.029144 | hypothetical protein | |
| SF1496 | 0 | 15 | -2.956660 | hydroperoxidase II | |
| SF1497 | 0 | 24 | -4.339745 | cell division modulator | |
| SF1498 | 0 | 22 | -5.278461 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1480 | DNABINDINGHU | 31 | 0.002 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 24 | SF1532 | SF1547a | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1532 | 1 | 15 | -3.623232 | electron transfer flavoprotein subunit YdiR | |
| SF1533 | 1 | 19 | -3.705063 | hypothetical protein | |
| SF1535 | 0 | 23 | -4.713619 | insertion element IS1 protein InsA | |
| SF1536 | 0 | 23 | -4.692141 | insertion element IS1 protein InsB | |
| SF1537 | 0 | 23 | -4.670663 | transcriptional regulator YdeO | |
| SF1537a | 2 | 21 | -2.760669 | two-protein-system connector protein SafA | |
| SF1538 | 2 | 21 | -2.210816 | oxidoreductase | |
| SF1539 | 5 | 25 | -2.296450 | minor fimbrial subunit, D-mannose specific | |
| SF1540 | 5 | 28 | -3.079024 | insertion element IS1 protein InsA | |
| SF1541 | 4 | 30 | -3.486075 | insertion element IS1 protein InsB | |
| SF1542 | 3 | 29 | -3.525952 | insertion sequence element IS600 protein | |
| SF1542a | 2 | 24 | -2.092728 | hypothetical protein | |
| SF1542b | 1 | 22 | -2.802662 | hypothetical protein | |
| SF1543 | 0 | 22 | -2.916524 | anti-adapter protein IraM | |
| SF1544 | -1 | 22 | -1.494086 | **antitermination protein | |
| SF1545 | 0 | 24 | -1.280937 | endodeoxyribonuclease RUS | |
| SF1546 | 2 | 25 | -1.099016 | bacteriophage protein | |
| SF1547 | 4 | 29 | -3.802305 | hypothetical protein | |
| SF1547a | 3 | 23 | -3.163287 | regulatory protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1547a | HOKGEFTOXIC | 61 | 5e-17 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
| 25 | SF1592 | SF1608 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1592 | 5 | 25 | -1.102314 | hypothetical protein | |
| SF1593 | 9 | 30 | -0.882507 | hypothetical protein | |
| SF1595 | 11 | 33 | -0.853154 | hypothetical protein | |
| SF1596 | 13 | 41 | 1.237684 | hypothetical protein | |
| SF1599 | 16 | 42 | 0.884636 | hypothetical protein | |
| SF1600 | 13 | 35 | 1.269721 | hypothetical protein | |
| SF1601 | 12 | 33 | 0.172180 | hypothetical protein | |
| SF1602 | 14 | 35 | -0.056485 | hypothetical protein | |
| SF1603 | 11 | 29 | -1.146381 | hypothetical protein | |
| SF1604 | 8 | 26 | -1.138449 | integrase | |
| SF1605 | 5 | 23 | -1.050052 | insertion sequence element IS911 integrase core | |
| SF1606 | 4 | 22 | -1.381354 | insertion sequence element IS911 transposase | |
| SF1608 | 3 | 18 | -0.314028 | integrase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1600 | PYOCINKILLER | 27 | 0.048 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 26 | SF1718 | SF1727 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1718 | 2 | 17 | -3.515854 | hypothetical protein | |
| SF1719 | 1 | 18 | -4.738974 | hypothetical protein | |
| SF1720 | 1 | 18 | -4.298421 | transport system permease | |
| SF1721 | -1 | 17 | -4.674100 | amino acid/amine transport protein | |
| SF1722 | -1 | 21 | -6.484894 | quinate/shikimate dehydrogenase | |
| SF1723 | 0 | 18 | -6.703909 | 3-dehydroquinate dehydratase | |
| SF1724 | 1 | 19 | -6.808597 | insertion element IS1 protein InsB | |
| SF1725 | 1 | 19 | -6.903575 | insertion element IS1 protein InsA | |
| SF1726 | 1 | 19 | -6.776266 | sulfatase | |
| SF1727 | 1 | 11 | -4.517276 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1720 | TCRTETA | 31 | 0.007 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1721 | TCRTETB | 30 | 0.021 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 27 | SF1804 | SF1811 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1804 | -1 | 27 | -4.658424 | insertion sequence element IS600 transposase | |
| SF1805 | -1 | 26 | -4.183939 | insertion sequence element IS600 protein | |
| SF1807 | -2 | 23 | -4.224325 | hypothetical protein | |
| SF1808 | -3 | 20 | -3.006525 | hypothetical protein | |
| SF1810 | -3 | 19 | -3.596709 | hypothetical protein | |
| SF1811 | -3 | 18 | -3.573525 | hypothetical protein |
| 28 | SF1824 | SF1843 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1824 | 0 | 22 | -3.542642 | universal stress protein F | |
| SF1825 | -1 | 17 | -1.648659 | tRNA 2-thiocytidine biosynthesis protein TtcA | |
| SF1826 | 0 | 22 | -2.073967 | ATP-dependent RNA helicase DbpA | |
| SF1827 | 1 | 22 | -2.791261 | zinc transporter | |
| SF1830 | 2 | 25 | -2.920675 | multidrug resistant protein-like protein | |
| SF1831 | -1 | 20 | 0.167662 | hypothetical protein | |
| SF1832 | -1 | 17 | -0.363289 | IS1294 transposase | |
| SF1834 | -1 | 20 | -1.541747 | hypothetical protein | |
| SF1834a | 0 | 19 | -0.872025 | hypothetical protein | |
| SF1835 | -1 | 17 | -2.291847 | O-6-alkylguanine-DNA:cysteine-protein | |
| SF1836 | -1 | 13 | -3.222522 | fumarate/nitrate reduction transcriptional | |
| SF1837 | 0 | 15 | -3.685948 | universal stress protein UspE | |
| SF1838 | 0 | 16 | -3.786712 | insertion sequence element IS911 integrase core | |
| SF1839 | 0 | 17 | -4.530628 | insertion sequence element IS911 transposase | |
| SF1840 | 0 | 16 | -4.452476 | hypothetical protein | |
| SF1841 | 1 | 18 | -3.125560 | transport protein | |
| SF1843 | 3 | 21 | -2.403762 | insertion sequence element IS600 transposase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1830 | TCRTETB | 102 | 2e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 29 | SF1878 | SF1893 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1878 | 2 | 18 | 1.713144 | insertion sequence element ISSfl2 transposase | |
| SF1879 | 3 | 18 | 1.262435 | bacteriophage protein | |
| SF1880 | 4 | 21 | 1.986514 | invasion plasmid antigen | |
| SF1881 | 5 | 25 | 4.148998 | prophage CP-933K tail protein | |
| SF1883 | 5 | 26 | 4.214576 | membrane protein | |
| SF1884 | 2 | 26 | 3.985206 | host specificity protein | |
| SF1885 | 3 | 28 | 3.875991 | phage tail protein | |
| SF1886 | 3 | 29 | 3.541873 | tail assembly protein | |
| SF1887 | 3 | 25 | 3.207179 | minor tail protein | |
| SF1888 | 3 | 25 | 2.878623 | minor tail protein | |
| SF1889 | 3 | 26 | 3.057836 | tail length tape measure protein | |
| SF1890 | 7 | 28 | 1.549808 | prophage CP-933K tail protein | |
| SF1891 | 7 | 29 | 1.705866 | prophage CP-933K tail protein | |
| SF1892 | 4 | 22 | 3.188249 | prophage CP-933K tail protein | |
| SF1893 | 2 | 26 | 1.468210 | prophage CP-933K tail protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1883 | ENTEROVIROMP | 134 | 2e-42 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1889 | RTXTOXIND | 40 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 30 | SF1970 | SF1995 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1970 | -1 | 12 | -3.624710 | cytoplasmic alpha-amylase | |
| SF1971 | 1 | 22 | -4.881812 | lipoprotein | |
| SF1972 | 2 | 27 | -6.180130 | hypothetical protein | |
| SF1973 | 4 | 36 | -8.505129 | hypothetical protein | |
| SF1977 | 1 | 24 | -5.629539 | porin | |
| SF1978 | 2 | 23 | -2.904975 | regulator | |
| SF1979 | 0 | 17 | 2.044716 | kinase inhibitor | |
| SF1980 | 1 | 18 | 3.276518 | multidrug efflux protein | |
| SF1982 | 1 | 18 | 3.905880 | flagellar hook-basal body protein FliE | |
| SF1984 | 1 | 18 | 3.688263 | flagellar motor switch protein G | |
| SF1985 | -1 | 17 | 3.048522 | flagellar assembly protein H | |
| SF1986 | -2 | 18 | 2.801276 | flagellum-specific ATP synthase | |
| SF1987 | -2 | 16 | 1.719021 | flagellar biosynthesis chaperone FliJ | |
| SF1988 | -2 | 17 | 1.793737 | flagellar hook-length control protein | |
| SF1989 | -2 | 22 | 1.325900 | flagellar basal body protein FliL | |
| SF1990 | 1 | 19 | -0.034524 | flagellar motor switch protein FliM | |
| SF1991 | 2 | 19 | -3.218047 | flagellar motor switch protein FliN | |
| SF1992 | 1 | 21 | -4.122128 | flagellar protein FliO | |
| SF1993 | 1 | 21 | -4.994159 | flagellar biosynthesis protein FliP | |
| SF1994 | 0 | 17 | -3.598723 | flagellar biosynthesis protein FliQ | |
| SF1995 | -1 | 18 | -3.624028 | flagellar biosynthesis protein FliR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1972 | RTXTOXIND | 30 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1973 | PF01206 | 93 | 6e-29 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1977 | ECOLIPORIN | 509 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1978 | HTHFIS | 29 | 0.017 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1982 | FLGHOOKFLIE | 117 | 8e-38 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1984 | FLGMOTORFLIG | 338 | e-118 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1985 | FLGFLIH | 373 | e-135 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1987 | FLGFLIJ | 152 | 5e-51 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1988 | FLGHOOKFLIK | 468 | e-168 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1990 | FLGMOTORFLIM | 380 | e-134 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1991 | FLGMOTORFLIN | 210 | 6e-74 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1993 | FLGBIOSNFLIP | 281 | 4e-99 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1994 | TYPE3IMQPROT | 67 | 1e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1995 | TYPE3IMRPROT | 203 | 4e-67 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| 31 | SF2007 | SF2063 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2007 | 3 | 24 | -1.611953 | hypothetical protein | |
| SF2008 | 4 | 23 | -1.351013 | hypothetical protein | |
| SF2009 | 1 | 20 | -1.790631 | outer membrane pore protein | |
| SF2010 | -1 | 26 | -4.126481 | IS2 transposase TnpB | |
| SF2011 | 0 | 31 | -6.344296 | IS2 repressor TnpA | |
| SF2012 | -1 | 31 | -7.235450 | insertion element IS1 protein InsA | |
| SF2013 | -1 | 32 | -7.285788 | insertion element IS1 protein InsB | |
| SF2014 | 0 | 34 | -8.791901 | chaperone protein HchA | |
| SF2015 | 2 | 40 | -9.478697 | 2-component sensor protein | |
| SF2016 | 3 | 36 | -8.589559 | transcriptional regulatory protein YedW | |
| SF2017 | 1 | 33 | -8.255809 | hydroxyisourate hydrolase | |
| SF2019 | 2 | 30 | -6.698791 | sulfite oxidase subunit YedZ | |
| SF2020 | 4 | 29 | -5.964437 | zinc/cadmium-binding protein | |
| SF2020a | 4 | 26 | -3.965338 | tail fiber assembly protein | |
| SF2021 | 3 | 29 | -5.322157 | hypothetical protein | |
| SF2023 | 2 | 22 | -2.688437 | insertion element iso-IS10R transposase | |
| SF2024 | 2 | 24 | -1.635646 | hypothetical protein | |
| SF2025 | 1 | 24 | -1.906287 | insertion sequence element IS600 protein | |
| SF2026 | 1 | 24 | -1.002947 | insertion element IS1 protein InsB | |
| SF2027 | 1 | 23 | -1.143780 | hypothetical protein | |
| SF2028 | 0 | 21 | -0.107015 | tail protein | |
| SF2029 | 1 | 21 | 0.233004 | bacteriophage protein | |
| SF2030 | 2 | 24 | 0.155608 | bacteriophage protein | |
| SF2031 | 2 | 24 | 0.066180 | sheath protein | |
| SF2033 | 3 | 26 | -2.089535 | insertion sequence element IS600 protein | |
| SF2034 | 3 | 25 | -2.200334 | insertion sequence element IS600 transposase | |
| SF2036 | 0 | 22 | -0.908532 | insertion sequence element ISSfl4 ORF2 | |
| SF2037 | -1 | 23 | -1.243479 | insertion sequence element ISSfl4 transposase | |
| SF2038 | 0 | 23 | -0.781943 | lysis protein S | |
| SF2039 | -1 | 25 | -0.657976 | ****Q antiterminator of prophage | |
| SF2040 | 0 | 26 | -0.499895 | crossover junction endodeoxyribonuclease | |
| SF2041 | 0 | 25 | -1.201665 | bacteriophage protein | |
| SF2042 | 1 | 27 | -4.362505 | hypothetical protein | |
| SF2042a | 1 | 25 | -2.928343 | hypothetical protein | |
| SF2042b | 2 | 25 | -3.911169 | regulatory protein | |
| SF2042c | 3 | 26 | -4.338679 | membrane protein | |
| SF2043 | 2 | 23 | -2.921271 | bacteriophage protein | |
| SF2045 | 0 | 20 | -2.664463 | *DgsA anti-repressor MtfA | |
| SF2048 | -1 | 23 | -3.446929 | *insertion sequence element IS911 integrase core | |
| SF2049 | -1 | 26 | -4.783382 | insertion sequence element IS911 transposase | |
| SF2051 | -1 | 27 | -4.460704 | insertion sequence element IS600 transposase | |
| SF2052 | -1 | 27 | -4.148185 | insertion sequence element IS600 protein | |
| SF2053 | -1 | 30 | -3.947337 | AMP nucleosidase | |
| SF2054 | 0 | 31 | -3.597407 | hypothetical protein | |
| SF2056 | 1 | 30 | -2.289589 | **transcriptional regulator Cbl | |
| SF2057 | 2 | 26 | -1.598006 | nitrogen assimilation transcriptional regulator | |
| SF2058 | 1 | 25 | -1.415448 | *L,D-transpeptidase | |
| SF2059 | 1 | 22 | -0.672514 | nicotinate-nucleotide--dimethylbenzimidazole | |
| SF2060 | 1 | 18 | 0.009174 | cobalamin synthase | |
| SF2061 | 2 | 22 | -0.898465 | adenosylcobinamide kinase | |
| SF2062 | 2 | 23 | -1.189949 | insertion sequence element IS600 protein | |
| SF2063 | 2 | 24 | -0.560488 | insertion sequence element IS600 transposase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2008 | HTHFIS | 27 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2009 | ECOLIPORIN | 288 | 1e-98 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2015 | PF06580 | 35 | 4e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2016 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2021 | LUXSPROTEIN | 31 | 0.002 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2038 | FLAGELLIN | 25 | 0.029 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2042b | HOKGEFTOXIC | 64 | 5e-18 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
| 32 | SF2081 | SF2111 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2081 | -1 | 23 | 3.430607 | ATP phosphoribosyltransferase | |
| SF2082 | 0 | 22 | 3.091666 | bifunctional histidinal dehydrogenase/ | |
| SF2083 | 0 | 24 | 1.997097 | histidinol-phosphate aminotransferase | |
| SF2084 | -1 | 18 | 0.034234 | imidazole glycerol-phosphate | |
| SF2085 | -1 | 16 | -0.596653 | imidazole glycerol phosphate synthase subunit | |
| SF2086 | -3 | 14 | -3.046649 | 1-(5-phosphoribosyl)-5-[(5- | |
| SF2087 | -1 | 18 | -5.937300 | imidazole glycerol phosphate synthase subunit | |
| SF2088 | 1 | 26 | -8.257433 | bifunctional phosphoribosyl-AMP | |
| SF2089 | 4 | 39 | -12.964859 | chain length determinant protein WzzB | |
| SF2091 | 5 | 45 | -15.827340 | 6-phosphogluconate dehydrogenase | |
| SF2092 | 6 | 63 | -21.130714 | hypothetical protein | |
| SF2093 | 8 | 63 | -20.541077 | hypothetical protein | |
| SF2096 | 7 | 61 | -20.167810 | glycosyl translocase | |
| SF2097 | 5 | 56 | -18.173384 | O-antigen polymerase | |
| SF2098 | 4 | 49 | -14.182241 | dTDP-rhamnosyl transferase | |
| SF2099 | 2 | 44 | -11.784371 | dTDP-rhamnosyl transferase | |
| SF2100 | 1 | 34 | -8.731633 | polysaccharide biosynthesis protein | |
| SF2101 | -1 | 19 | -5.621468 | dTDP-6-deoxy-L-mannose-dehydrogenase | |
| SF2102 | -1 | 13 | -3.379982 | glucose-1-phosphate thymidylyltransferase | |
| SF2103 | -2 | 13 | -1.690183 | dTDP-4-dehydrorhamnose reductase | |
| SF2104 | -2 | 12 | -0.824725 | dTDP-glucose 4,6 dehydratase | |
| SF2105 | -2 | 17 | 0.673585 | GalU regulator GalF | |
| SF2106 | -1 | 20 | 1.198168 | colanic acid biosynthesis protein | |
| SF2107 | -1 | 22 | 2.452489 | colanic acid biosynthesis glycosyltransferase | |
| SF2108 | 0 | 22 | 2.603536 | colanic acid biosynthesis protein | |
| SF2109 | -1 | 21 | 2.717723 | colanic acid exporter | |
| SF2110 | -1 | 22 | 3.039106 | UDP-glucose lipid carrier transferase | |
| SF2111 | -1 | 22 | 3.134169 | phosphomannomutase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2103 | NUCEPIMERASE | 47 | 5e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2104 | NUCEPIMERASE | 184 | 1e-57 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 33 | SF2132 | SF2211 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2132 | -2 | 19 | 3.134225 | insertion sequence element ISSfl2 transposase | |
| SF2133 | -3 | 13 | 3.482220 | 3-methyladenine DNA glycosylase | |
| SF2136 | -3 | 13 | 3.425483 | hypothetical protein | |
| SF2137 | -3 | 15 | 3.665600 | hypothetical protein | |
| SF2138 | -2 | 15 | 3.822796 | insertion sequence element ISSfl2 transposase | |
| SF2139 | -1 | 18 | 3.158113 | acriflavin resistance protein AcrA-like protein | |
| SF2141 | -1 | 18 | 3.200526 | multidrug efflux system subunit MdtC | |
| SF2142 | -2 | 12 | 1.025281 | transporter | |
| SF2143 | -1 | 9 | -0.265849 | signal transduction histidine-protein kinase | |
| SF2144 | 1 | 12 | -2.084952 | DNA-binding transcriptional regulator BaeR | |
| SF2145 | 1 | 14 | -3.010950 | hypothetical protein | |
| SF2146 | 0 | 13 | -2.655981 | protease | |
| SF2148 | 0 | 23 | -4.115627 | hypothetical protein | |
| SF2149 | 3 | 18 | -2.354875 | lipid kinase | |
| SF2150 | 2 | 20 | -2.781502 | galactitol utilization operon repressor | |
| SF2151 | 1 | 21 | -3.097530 | galactitol-1-phosphate dehydrogenase | |
| SF2152 | 2 | 18 | -3.012645 | insertion element IS1 protein InsB | |
| SF2153 | 3 | 17 | -2.519911 | insertion element IS1 protein InsA | |
| SF2154 | 2 | 16 | -2.301830 | PTS system galactitol-specific transporter | |
| SF2155 | 1 | 17 | -1.484356 | PTS system galactitol-specific transporter | |
| SF2156 | -1 | 18 | -2.240232 | PTS system galactitol-specific transporter | |
| SF2157 | -1 | 17 | -1.926369 | D-tagatose-1,6-bisphosphate aldolase subunit | |
| SF2158 | -2 | 19 | -0.903332 | tagatose-bisphosphate aldolase | |
| SF2159 | -1 | 21 | -0.766298 | fructose-bisphosphate aldolase | |
| SF2161 | -2 | 21 | -0.978626 | kinase | |
| SF2162 | -1 | 22 | -2.231860 | insertion element iso-IS10R transposase | |
| SF2164 | 1 | 24 | -3.205350 | hypothetical protein | |
| SF2165 | 2 | 26 | -4.526073 | bifunctional hydroxy-methylpyrimidine kinase/ | |
| SF2166 | 2 | 26 | -4.967833 | hydroxyethylthiazole kinase | |
| SF2167 | 2 | 27 | -6.786696 | transcriptional repressor RcnR | |
| SF2169 | 2 | 27 | -6.403797 | hypothetical protein | |
| SF2170 | 2 | 25 | -6.269138 | type-1 fimbrial protein | |
| SF2171 | 0 | 23 | -5.009225 | fimbrial outer membrane usher protein | |
| SF2173 | 0 | 15 | -1.247653 | insertion element IS1 protein InsB | |
| SF2175 | 1 | 16 | -0.785283 | fimbrial-like protein | |
| SF2176 | 1 | 16 | 0.162528 | insertion element IS1 protein InsB | |
| SF2177 | 1 | 16 | -0.038113 | insertion element IS1 protein InsA | |
| SF2177a | 1 | 16 | -0.038113 | hypothetical protein | |
| SF2178 | 2 | 18 | 0.463203 | antiporter inner membrane protein | |
| SF2179 | 2 | 19 | -1.370039 | methionyl-tRNA synthetase | |
| SF2181 | 0 | 22 | -2.022327 | insertion sequence element IS600 transposase | |
| SF2182 | 1 | 17 | 0.504753 | insertion sequence element IS600 protein | |
| SF2183 | 1 | 18 | 0.947273 | insertion element IS1 protein InsA | |
| SF2184 | 2 | 20 | 1.339450 | insertion element IS1 protein InsB | |
| SF2187 | 1 | 19 | 1.317855 | hypothetical protein | |
| SF2188 | 2 | 18 | 1.467008 | hypothetical protein | |
| SF2189 | 2 | 17 | 1.524331 | hypothetical protein | |
| SF2190 | 2 | 17 | 0.572057 | hypothetical protein | |
| SF2191 | 3 | 16 | -0.247133 | hypothetical protein | |
| SF2192 | 0 | 16 | -2.907837 | insertion element IS1 protein InsB | |
| SF2193 | -1 | 14 | -2.579515 | hypothetical protein | |
| SF2194 | -2 | 15 | -2.114960 | insertion element IS1 protein InsB | |
| SF2195 | -2 | 17 | -2.396971 | insertion element IS1 protein InsA | |
| SF2196 | -2 | 18 | -4.151903 | hypothetical protein | |
| SF2197 | -2 | 22 | -4.766125 | two-component response-regulatory protein YehT | |
| SF2198 | -1 | 21 | -4.217318 | 2-component sensor protein | |
| SF2200 | 3 | 27 | -3.663378 | DNA-damage-inducible protein | |
| SF2200a | 3 | 25 | -3.258278 | tail fiber assembly protein | |
| SF2201 | 2 | 25 | -3.054023 | hypothetical protein | |
| SF2203 | 2 | 22 | -1.335970 | insertion element iso-IS10R transposase | |
| SF2204 | 3 | 26 | 1.094757 | bacteriophage protein | |
| SF2205 | 1 | 24 | 1.553821 | tail fiber protein | |
| SF2206 | -1 | 18 | 2.266479 | tail fiber assembly protein | |
| SF2208 | 1 | 19 | 3.705355 | insertion element IS1 protein InsA | |
| SF2209 | 2 | 18 | 3.667758 | insertion element IS1 protein InsB | |
| SF2211 | -1 | 16 | 3.212693 | insertion sequence element IS629 protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2139 | RTXTOXIND | 44 | 5e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2141 | ACRIFLAVINRP | 905 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2142 | TCRTETB | 125 | 2e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2143 | BCTERIALGSPF | 31 | 0.009 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2144 | HTHFIS | 76 | 6e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2148 | LIPOLPP20 | 27 | 0.026 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2151 | DHBDHDRGNASE | 34 | 7e-04 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2169 | TYPE3OMGPROT | 26 | 0.029 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2170 | BINARYTOXINB | 28 | 0.043 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2171 | PF00577 | 713 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2193 | INTIMIN | 28 | 0.015 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2197 | HTHFIS | 71 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2198 | PF06580 | 220 | 4e-69 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2201 | LUXSPROTEIN | 31 | 0.002 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| 34 | SF2277 | SF2288 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2277 | 0 | 20 | 3.255187 | transcriptional regulator NarP | |
| SF2278 | 0 | 21 | 3.681911 | heme lyase subunit | |
| SF2279 | 1 | 21 | 3.947281 | thiol:disulfide interchange protein DsbE | |
| SF2280 | 0 | 19 | 4.099028 | cytochrome c-type biogenesis protein | |
| SF2281 | 0 | 16 | 2.784610 | cytochrome c-type biogenesis protein CcmE | |
| SF2282 | 1 | 16 | 2.980402 | heme exporter protein C | |
| SF2283 | 0 | 15 | 3.091502 | heme exporter protein C | |
| SF2284 | -1 | 17 | 3.684875 | heme exporter protein B | |
| SF2285 | -1 | 19 | 3.827647 | cytochrome c biogenesis protein CcmA | |
| SF2286 | -1 | 21 | 3.790479 | cytochrome c-type protein NapC | |
| SF2287 | -1 | 19 | 4.156951 | nitrate reductase cytochrome C550 subunit | |
| SF2288 | -1 | 19 | 3.592189 | quinol dehydrogenase membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2277 | HTHFIS | 63 | 7e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 35 | SF2337 | SF2359 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2337 | 0 | 14 | 3.432080 | 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase | |
| SF2338 | 1 | 14 | 4.642227 | signal transduction protein PmrD | |
| SF2339 | 1 | 15 | 4.566391 | O-succinylbenzoic acid--CoA ligase | |
| SF2340 | 0 | 14 | 4.389155 | O-succinylbenzoate synthase | |
| SF2341 | 0 | 13 | 3.073511 | dihydroxynaphthoic acid synthetase | |
| SF2342 | 0 | 14 | 2.228878 | 2-succinyl-6-hydroxy-2, | |
| SF2343 | 0 | 13 | 1.825689 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- | |
| SF2344 | -1 | 17 | -0.252284 | isochorismate hydroxymutase 2 | |
| SF2345 | -1 | 19 | -2.118544 | hypothetical protein | |
| SF2346 | 0 | 13 | 0.361848 | acyltransferase | |
| SF2347 | 0 | 16 | 1.663453 | hypothetical protein | |
| SF2348 | 2 | 25 | 3.288352 | insertion element IS1 protein InsA | |
| SF2349 | 2 | 26 | 3.360097 | insertion element IS1 protein InsB | |
| SF2351 | 1 | 27 | 3.393802 | hypothetical protein | |
| SF2352 | 0 | 29 | 3.900681 | NADH dehydrogenase I subunit N | |
| SF2353 | 0 | 29 | 3.287298 | NADH:ubiquinone oxidoreductase subunit M | |
| SF2354 | 0 | 29 | 3.749619 | NADH:ubiquinone oxidoreductase subunit L | |
| SF2355 | 0 | 29 | 3.563641 | NADH:ubiquinone oxidoreductase subunit K | |
| SF2356 | 0 | 28 | 3.608345 | NADH:ubiquinone oxidoreductase subunit J | |
| SF2357 | 1 | 27 | 3.759360 | NADH dehydrogenase subunit I | |
| SF2358 | 0 | 26 | 3.573091 | NADH:ubiquinone oxidoreductase subunit H | |
| SF2359 | 1 | 25 | 3.597168 | NADH dehydrogenase subunit G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2346 | AUTOINDCRSYN | 35 | 6e-05 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 36 | SF2407 | SF2440 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2407 | 0 | 23 | -3.983970 | N5-glutamine S-adenosyl-L-methionine-dependent | |
| SF2406 | 3 | 28 | -5.498424 | hypothetical protein | |
| SF2408 | 4 | 27 | -5.864912 | hypothetical protein | |
| SF2409 | 4 | 22 | -4.254826 | fimbrial-like protein | |
| SF2410 | 3 | 18 | -2.919176 | minor fimbrial subunit | |
| SF2411 | -1 | 14 | -1.214861 | minor fimbrial subunit | |
| SF2415 | -2 | 10 | 0.368002 | fimbrial-like protein | |
| SF2416 | -2 | 10 | 1.049646 | insertion element IS1 protein InsB | |
| SF2417 | -2 | 12 | 0.395430 | insertion element IS1 protein InsA | |
| SF2418 | -1 | 15 | -0.926710 | phosphohistidine phosphatase | |
| SF2419 | -1 | 18 | -3.341579 | multifunctional fatty acid oxidation complex | |
| SF2420 | 1 | 20 | -4.076168 | 3-ketoacyl-CoA thiolase | |
| SF2420a | 3 | 23 | -6.120990 | hypothetical protein | |
| SF2421 | 4 | 23 | -5.134075 | long-chain fatty acid outer membrane | |
| SF2422 | 3 | 24 | -4.799574 | insertion element iso-IS10R transposase | |
| SF2423 | 2 | 20 | -3.511325 | hypothetical protein | |
| SF2424 | 1 | 18 | -0.581241 | ABC transporter outer membrane lipoprotein | |
| SF2426 | 1 | 18 | -0.928564 | *integrase | |
| SF2427 | 1 | 22 | -2.786249 | insertion sequence element IS911 integrase core | |
| SF2430 | 0 | 27 | -4.795096 | hypothetical protein | |
| SF2431 | 0 | 30 | -6.420935 | sucrose specific repressor | |
| SF2432 | 0 | 33 | -9.229655 | gluconate-like high-affinity transporter | |
| SF2433 | 0 | 34 | -9.065066 | D-serine dehydratase | |
| SF2434 | 0 | 36 | -9.965891 | multidrug resistance protein Y | |
| SF2435 | 0 | 36 | -9.109737 | multidrug resistance protein K | |
| SF2436 | 1 | 34 | -8.366940 | DNA-binding transcriptional activator EvgA | |
| SF2437 | 1 | 34 | -7.998789 | hybrid sensory histidine kinase in two-component | |
| SF2438 | 3 | 33 | -6.310953 | hypothetical protein | |
| SF2439 | 2 | 32 | -6.059876 | transporter YfdV | |
| SF2440 | 1 | 27 | -4.962516 | oxalyl-CoA decarboxylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2409 | FIMBRIALPAPE | 33 | 4e-04 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2410 | FIMBRIALPAPF | 43 | 8e-08 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2424 | VACJLIPOPROT | 407 | e-148 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2434 | TCRTETB | 119 | 3e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2435 | RTXTOXIND | 77 | 1e-17 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2436 | HTHFIS | 49 | 3e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2437 | HTHFIS | 80 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 37 | SF2484 | SF2499 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2484 | 2 | 15 | 0.976555 | hypothetical protein | |
| SF2485 | 2 | 14 | 0.906883 | RpoE-regulated lipoprotein | |
| SF2486 | 2 | 15 | 1.893276 | hypothetical protein | |
| SF2487 | 0 | 13 | 0.704064 | acetyltransferase | |
| SF2488 | 1 | 15 | -0.247297 | N-acetylmuramoyl-L-alanine amidase | |
| SF2489 | 0 | 18 | -0.313724 | coproporphyrinogen III oxidase | |
| SF2491 | 0 | 19 | -1.785633 | carboxysome structural protein EutK | |
| SF2492 | 1 | 20 | -3.330716 | ethanolamine utilization protein EutL | |
| SF2493 | 0 | 23 | -5.443452 | hypothetical protein | |
| SF2494 | -1 | 18 | -5.361248 | hypothetical protein | |
| SF2495 | 5 | 35 | -8.004782 | hypothetical protein | |
| SF2496 | 6 | 39 | -10.200945 | hypothetical protein | |
| SF2497 | 6 | 39 | -10.158497 | hypothetical protein | |
| SF2497a | 7 | 41 | -10.162830 | hypothetical protein | |
| SF2498 | 2 | 26 | -5.190954 | hypothetical protein | |
| SF2499 | 2 | 24 | -5.003688 | amino acid antiporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2487 | SACTRNSFRASE | 31 | 6e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 38 | SF2565 | SF2575 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2565 | -1 | 12 | 3.278978 | penicillin-binding protein 1B-like protein | |
| SF2569 | 0 | 16 | 2.393373 | enhanced serine sensitivity protein SseB | |
| SF2570 | 0 | 19 | 3.356042 | aminopeptidase | |
| SF2571 | 2 | 21 | 2.432401 | hypothetical protein | |
| SF2572 | 2 | 25 | 2.280750 | [2FE-2S] ferredoxin electron carrer protein | |
| SF2573 | 2 | 25 | 2.342212 | chaperone protein HscA | |
| SF2574 | 1 | 24 | 0.797578 | co-chaperone HscB | |
| SF2575 | 2 | 28 | 1.098628 | iron-sulfur cluster assembly protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2569 | STREPKINASE | 30 | 0.014 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2573 | SHAPEPROTEIN | 114 | 9e-30 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 39 | SF2608 | SF2617 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2608 | 2 | 21 | -2.992706 | hypothetical protein | |
| SF2609 | 5 | 27 | -3.178855 | DNA-invertase | |
| SF2610 | 4 | 26 | -2.070247 | invasion plasmid antigen | |
| SF2611 | 1 | 21 | -0.108699 | prophage CP-933K tail protein | |
| SF2613 | 2 | 23 | -0.673601 | tail fiber assembly protein | |
| SF2614 | 3 | 24 | -0.378360 | bacteriophage protein | |
| SF2615 | 2 | 24 | -0.285122 | IS2 repressor TnpA | |
| SF2616 | 3 | 24 | -0.131053 | IS2 transposase TnpB | |
| SF2617 | 3 | 24 | -1.628645 | tail fiber protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2609 | STREPKINASE | 28 | 0.019 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. | |||||
| 40 | SF2673 | SF2701 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2673 | 2 | 15 | -1.389268 | heat shock protein GrpE | |
| SF2674 | 2 | 15 | -1.213782 | inorganic polyphosphate/ATP-NAD kinase | |
| SF2675 | 2 | 17 | -1.469075 | recombination and repair protein | |
| SF2676 | 1 | 22 | -2.039985 | small membrane protein A | |
| SF2677 | 1 | 21 | -1.623556 | hypothetical protein | |
| SF2678 | 2 | 20 | -1.625754 | hypothetical protein | |
| SF2679 | 1 | 21 | -0.314178 | SsrA-binding protein | |
| SF2680 | 2 | 28 | -6.190476 | integrase | |
| SF2681 | -1 | 22 | -5.792216 | insertion element IS1 protein InsA | |
| SF2682 | -2 | 16 | -3.717662 | insertion element IS1 protein InsB | |
| SF2683 | -1 | 13 | -2.209453 | insertion sequence IS3 transposase InsE | |
| SF2684 | 0 | 14 | -1.911332 | insertion sequence IS3A transposase InsF | |
| SF2685 | 0 | 13 | -2.670022 | *hypothetical protein | |
| SF2686 | 1 | 20 | 2.863717 | hypothetical protein | |
| SF2687 | -1 | 22 | 3.584034 | hydroxyglutarate oxidase | |
| SF2689 | -1 | 23 | 2.579600 | GABA transaminase | |
| SF2691 | -1 | 26 | 0.640542 | DNA-binding transcriptional regulator CsiR | |
| SF2692 | 0 | 23 | -0.716993 | LysM domain/BON superfamily protein | |
| SF2693a | -1 | 23 | -0.750966 | hypothetical protein | |
| SF2693 | -1 | 22 | -1.056482 | IS2 transposase TnpB | |
| SF2694 | 1 | 23 | -3.238960 | IS2 repressor TnpA | |
| SF2695 | 0 | 24 | -3.306420 | hypothetical protein | |
| SF2696 | 2 | 21 | -2.595174 | hypothetical protein | |
| SF2697 | 1 | 12 | -0.834079 | DNA binding protein, nucleoid-associated | |
| SF2698 | 1 | 12 | -1.033551 | hypothetical protein | |
| SF2699 | 3 | 15 | -1.333937 | hypothetical protein | |
| SF2701 | 2 | 13 | 0.237601 | glutaredoxin-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2676 | BLACTAMASEA | 26 | 0.032 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2701 | PF07675 | 26 | 0.014 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| 41 | SF2730 | SF2742 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2730 | 1 | 15 | 3.153937 | DNA-binding transcriptional repressor SrlR | |
| SF2731 | 1 | 15 | 3.632811 | hypothetical protein | |
| SF2732 | 1 | 17 | 3.171049 | 2-component transcriptional regulator | |
| SF2733 | -1 | 17 | 3.465573 | anaerobic nitric oxide reductase | |
| SF2734 | 0 | 18 | 4.063996 | NADH:flavorubredoxin oxidoreductase | |
| SF2735 | 0 | 18 | 4.809646 | transcriptional regulatory protein | |
| SF2736 | -1 | 22 | 4.572909 | formate dehydrogenase-H ferredoxin subunit | |
| SF2737 | -2 | 22 | 4.425181 | ascBF operon repressor | |
| SF2738 | 0 | 24 | 4.861305 | hydrogenase 3 large subunit | |
| SF2739 | 2 | 21 | 4.544428 | hydrogenase 3 membrane-spanning protein | |
| SF2740 | 2 | 22 | 4.138897 | formate hydrogenlyase subunit 3 | |
| SF2741 | 2 | 20 | 2.729409 | hydrogenase-3 iron-sulfur protein | |
| SF2742 | 1 | 20 | 3.063960 | formate hydrogenlyase regulatory protein HycA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2730 | ARGREPRESSOR | 29 | 0.014 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2732 | HTHFIS | 377 | e-128 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2740 | PF00577 | 30 | 0.039 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 42 | SF2779 | SF2789 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2779 | -1 | 13 | 3.103259 | sulfite reductase subunit beta | |
| SF2780 | 0 | 14 | 3.051434 | sulfite reductase subunit alpha | |
| SF2781 | 1 | 19 | 2.075009 | 6-pyruvoyl tetrahydrobiopterin synthase | |
| SF2782 | 1 | 16 | 2.339974 | hypothetical protein | |
| SF2783 | 2 | 15 | 1.756008 | hypothetical protein | |
| SF2785 | 2 | 16 | 1.608087 | flavoprotein | |
| SF2786 | 2 | 16 | 1.236747 | transporter | |
| SF2787 | 1 | 19 | -0.087310 | transporter | |
| SF2789 | 3 | 26 | -0.534079 | insertion element IS1 protein InsB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2779 | PF07675 | 30 | 0.021 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2787 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 43 | SF2854 | SF2861 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2854 | 3 | 20 | -0.180640 | acyltransferase | |
| SF2856 | 7 | 27 | -1.019686 | insertion sequence IS3 transposase InsE | |
| SF2857 | 6 | 27 | -1.448982 | insertion sequence IS3A transposase InsF | |
| SF2858 | 7 | 33 | -3.480967 | hypothetical protein | |
| SF2859 | 11 | 37 | -2.096085 | hypothetical protein | |
| SF2860 | 7 | 29 | -2.611803 | hypothetical protein | |
| SF2861 | 2 | 21 | -1.549018 | hypothetical protein |
| 44 | SF2963 | SF3006 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2963 | 2 | 24 | -5.445054 | transporter | |
| SF2964 | 2 | 24 | -5.458814 | *P4-type integrase | |
| SF2965 | 2 | 24 | -5.568039 | superfamily I DNA helicase | |
| SF2967a | 5 | 26 | -4.515341 | hypothetical protein | |
| SF2967 | 7 | 27 | -3.934353 | hypothetical protein | |
| SF2968 | 6 | 27 | -3.775379 | serine protease | |
| SF2970 | 6 | 26 | -0.321158 | hypothetical protein | |
| SF2971 | 6 | 26 | -0.467257 | hypothetical protein | |
| SF2972 | 6 | 25 | -0.364614 | hypothetical protein | |
| SF2973 | 6 | 25 | -0.845968 | serine protease | |
| SF2976 | 5 | 24 | 0.622641 | reverse transcriptase-like protein | |
| SF2977 | 5 | 29 | -2.664093 | hypothetical protein | |
| SF2979 | 5 | 30 | -2.826617 | insertion sequence element IS629 protein | |
| SF2980 | 5 | 28 | -2.046710 | hypothetical protein | |
| SF2981 | 4 | 29 | -3.787600 | hypothetical protein | |
| SF2982 | 4 | 27 | -4.178092 | hypothetical protein | |
| SF2983 | 3 | 26 | -3.702987 | insertion element iso-IS10R transposase | |
| SF2984 | 2 | 29 | -5.593931 | IS2 repressor TnpA | |
| SF2985 | 4 | 25 | -3.676450 | insertion element IS2 transposase InsD | |
| SF2986 | 6 | 23 | 0.100544 | hypothetical protein | |
| SF2987 | 7 | 23 | 1.135974 | hypothetical protein | |
| SF2988 | 7 | 23 | 0.852044 | hypothetical protein | |
| SF2989 | 6 | 23 | 1.010651 | hypothetical protein | |
| SF2990 | 8 | 24 | 3.385277 | hypothetical protein | |
| SF2991 | 8 | 24 | 3.121786 | outer membrane fluffing protein | |
| SF2992 | 6 | 24 | 1.701886 | hypothetical protein | |
| SF2993 | 7 | 25 | 3.007650 | hypothetical protein | |
| SF2993a | 8 | 29 | 5.102124 | hypothetical protein | |
| SF2994 | 8 | 30 | 4.814862 | hypothetical protein | |
| SF2995 | 8 | 28 | 4.260549 | hypothetical protein | |
| SF2996 | 7 | 29 | 3.671751 | RADC family DNA repair protein | |
| SF2997 | 7 | 28 | 0.544401 | hypothetical protein | |
| SF2998 | 5 | 26 | -1.993127 | structural protein | |
| SF2999 | 6 | 26 | -2.594287 | hypothetical protein | |
| SF3000 | 7 | 27 | -3.100575 | hypothetical protein | |
| SF3001 | 5 | 25 | -2.343726 | hypothetical protein | |
| SF3002 | 3 | 27 | -3.424539 | hypothetical protein | |
| SF3003 | 2 | 28 | -3.662279 | insertion element iso-IS10R transposase | |
| SF3004 | 2 | 26 | -3.787368 | hypothetical protein | |
| SF3005 | 1 | 27 | -4.248937 | insertion sequence IS3 transposase InsE | |
| SF3006 | 1 | 28 | -4.038168 | insertion sequence IS3A transposase InsF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2968 | IGASERPTASE | 283 | 3e-80 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2973 | IGASERPTASE | 752 | 0.0 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2991 | PRTACTNFAMLY | 43 | 6e-06 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 45 | SF3195 | SF3209 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3195 | 1 | 19 | 3.265095 | hypothetical protein | |
| SF3196 | -1 | 18 | 3.413682 | GIY-YIG nuclease superfamily protein | |
| SF3197 | -1 | 18 | 2.946998 | hypothetical protein | |
| SF3198 | -1 | 17 | 3.088108 | hypothetical protein | |
| SF3199 | -1 | 14 | 2.450433 | collagenase | |
| SF3200 | 0 | 21 | 1.869818 | protease | |
| SF3201 | 1 | 25 | 1.553594 | hypothetical protein | |
| SF3202 | 1 | 27 | 1.122990 | tryptophan permease | |
| SF3203 | 4 | 32 | 1.046117 | inducible ATP-independent RNA helicase | |
| SF3204 | 5 | 32 | 0.534709 | lipoprotein NlpI | |
| SF3205 | 5 | 37 | 1.064561 | polynucleotide phosphorylase | |
| SF3206 | 5 | 32 | 0.608051 | 30S ribosomal protein S15 | |
| SF3207 | 3 | 29 | 0.593088 | tRNA pseudouridine synthase B | |
| SF3208 | 4 | 29 | 0.546874 | ribosome-binding factor A | |
| SF3209 | 2 | 27 | 0.850273 | translation initiation factor IF-2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3209 | TCRTETOQM | 73 | 2e-15 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 46 | SF3469 | SF3514 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3469 | -1 | 25 | 3.026124 | glycerol-3-phosphate ABC transporter permease | |
| SF3470 | -2 | 25 | 3.287883 | glycerol-3-phosphate transporter permease | |
| SF3471 | -1 | 23 | 3.095609 | glycerol-3-phosphate ABC transporter | |
| SF3472 | -1 | 21 | 3.580291 | leucine/isoleucine/valine ABC transporter | |
| SF3473 | -1 | 21 | 2.967691 | leucine/isoleucine/valine ABC transporter | |
| SF3474 | -2 | 22 | 2.970695 | leucine/isoleucine/valine ABC transporter | |
| SF3475 | -2 | 21 | 2.413964 | branched-chain amino acid ABC transporter | |
| SF3476 | 0 | 21 | 2.269008 | leucine ABC transporter substrate-binding | |
| SF3477 | 1 | 19 | 1.948123 | hypothetical protein | |
| SF3478 | 1 | 17 | 1.795239 | leucine ABC transporter substrate-binding | |
| SF3479 | 2 | 15 | 1.338029 | RNA polymerase factor sigma-32 | |
| SF3480 | 2 | 13 | 1.002450 | cell division ABC transporter subunit FtsX | |
| SF3481 | 3 | 12 | 1.375652 | cell division protein FtsE | |
| SF3482 | 2 | 12 | 2.929504 | signal recognition particle-docking protein | |
| SF3483 | 0 | 16 | 3.493846 | 16S rRNA m(2)G966-methyltransferase | |
| SF3484 | 0 | 14 | 2.960516 | hypothetical protein | |
| SF3485 | -1 | 14 | 2.981951 | receptor | |
| SF3486 | -1 | 14 | 3.447112 | hypothetical protein | |
| SF3487 | 1 | 15 | 2.608844 | zinc/cadmium/mercury/lead-transporting ATPase | |
| SF3488 | 2 | 18 | 1.226398 | sulfur transfer protein SirA | |
| SF3489 | 1 | 15 | 1.235481 | hypothetical protein | |
| SF3490 | 1 | 16 | 2.287758 | hypothetical protein | |
| SF3491 | 1 | 18 | 3.446822 | major facilitator superfamily transporter | |
| SF3492 | 0 | 20 | 3.837625 | hypothetical protein | |
| SF3493 | 0 | 23 | 4.702759 | holo-(acyl carrier protein) synthase 2 | |
| SF3494 | 0 | 23 | 4.636711 | nickel ABC transporter substrate-binding | |
| SF3495 | 2 | 22 | 4.739467 | nickel ABC transporter permease NikB | |
| SF3496 | 2 | 21 | 3.920822 | nickel ABC transporter permease NikC | |
| SF3497 | 0 | 20 | 3.650356 | nickel ABC transporter ATP-binding protein NikD | |
| SF3498 | 0 | 19 | 3.825131 | nickel ABC transporter ATP-binding protein NikE | |
| SF3499 | -1 | 14 | -0.230020 | nickel responsive regulator | |
| SF3500 | 1 | 19 | -4.274928 | hypothetical protein | |
| SF3501 | 1 | 20 | -4.811594 | transporter | |
| SF3502 | 1 | 25 | -6.851846 | ABC transporter ATP-binding protein | |
| SF3503 | 2 | 40 | -12.606511 | hypothetical protein | |
| SF3504 | 4 | 47 | -15.517089 | hypothetical protein | |
| SF3505 | 6 | 45 | -14.185868 | hypothetical protein | |
| SF3507 | 6 | 40 | -10.753789 | hypothetical protein | |
| SF3508 | 3 | 34 | -7.333665 | hypothetical protein | |
| SF3509 | 4 | 29 | -5.712337 | hypothetical protein | |
| SF3510 | 4 | 28 | -3.813791 | hypothetical protein | |
| SF3511 | 4 | 25 | -3.220371 | hypothetical protein | |
| SF3512 | 3 | 24 | -2.159073 | IS2 repressor TnpA | |
| SF3513 | 4 | 23 | -1.819261 | IS2 transposase TnpB | |
| SF3514 | 2 | 19 | -3.320402 | outer membrane pore protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3471 | MALTOSEBP | 40 | 2e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3482 | IGASERPTASE | 51 | 9e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3485 | SHIGARICIN | 26 | 0.039 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3488 | PF01206 | 105 | 3e-34 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3491 | TCRTETA | 55 | 2e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3498 | HTHFIS | 29 | 0.018 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3501 | ABC2TRNSPORT | 50 | 5e-09 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3502 | PF05272 | 30 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3503 | RTXTOXIND | 84 | 4e-20 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3511 | PF00577 | 264 | 9e-83 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3514 | ECOLIPORIN | 296 | e-101 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 47 | SF3528 | SF3544 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3528 | -1 | 20 | 3.183245 | methyltransferase | |
| SF3529 | -1 | 20 | 2.295181 | oligopeptidase A | |
| SF3530 | -1 | 17 | 1.936417 | hypothetical protein | |
| SF3531 | 0 | 20 | 1.492935 | glutathione reductase | |
| SF3532 | 0 | 21 | 1.034156 | insertion element IS1 protein InsB | |
| SF3533 | 0 | 16 | -0.698948 | insertion element IS1 protein InsA | |
| SF3534 | 0 | 22 | -5.399950 | hypothetical protein | |
| SF3535 | 1 | 22 | -5.856663 | arsenical pump membrane protein | |
| SF3536 | 1 | 28 | -9.291733 | arsenate reductase | |
| SF3537 | 2 | 32 | -10.515255 | insertion element IS1 protein InsB | |
| SF3538 | 3 | 36 | -11.846790 | hypothetical protein | |
| SF3539 | 2 | 32 | -12.312989 | hypothetical protein | |
| SF3540 | 2 | 24 | -10.926166 | carbon starvation outer membrane protein | |
| SF3541 | 3 | 24 | -10.892450 | hypothetical protein | |
| SF3543 | 2 | 20 | -8.584230 | acid-resistance protein | |
| SF3544 | 1 | 19 | -6.934058 | acid-resistance protein |
| 48 | SF3587 | SF3606 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3587 | 1 | 21 | -3.268561 | bifunctional glyoxylate/hydroxypyruvate | |
| SF3588 | 0 | 21 | -4.055788 | hypothetical protein | |
| SF3589 | -1 | 14 | -2.672511 | RNA chaperone/anti-terminator | |
| SF3590 | -1 | 17 | -3.821913 | insertion element IS150 protein InsB | |
| SF3591 | -2 | 15 | -3.798964 | insertion element IS150 protein | |
| SF3592 | -1 | 14 | -3.439344 | insertion element IS1 protein InsB | |
| SF3593 | -1 | 13 | -3.569622 | cytochrome C peroxidase | |
| SF3594 | -1 | 14 | -0.945471 | glutamate decarboxylase | |
| SF3595 | 0 | 16 | -0.893762 | DNA-binding transcriptional regulator GadX | |
| SF3596 | 1 | 19 | 0.651119 | AraC family transcriptional regulator | |
| SF3600 | -2 | 20 | 1.002668 | insertion element IS1 protein InsA | |
| SF3601 | -1 | 19 | 0.066119 | insertion element IS1 protein InsB | |
| SF3602 | -2 | 16 | -0.722340 | glycyl-tRNA synthetase subunit beta | |
| SF3603 | 1 | 17 | -1.838628 | glycyl-tRNA synthetase subunit alpha | |
| SF3604 | 1 | 20 | -4.461014 | hypothetical protein | |
| SF3605 | 0 | 19 | -4.626233 | hypothetical protein | |
| SF3606 | 0 | 21 | -3.284315 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3606 | FLGBIOSNFLIP | 27 | 0.017 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| 49 | SF3635 | SF3642 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3635 | 0 | 21 | -3.644713 | mannitol repressor protein | |
| SF3635a | 2 | 24 | -3.825306 | hypothetical protein | |
| SF3636 | 4 | 21 | -2.112585 | hypothetical protein | |
| SF3637 | 3 | 19 | -0.942995 | insertion element IS1 protein InsB | |
| SF3638 | 2 | 17 | -0.693070 | insertion element IS1 protein InsA | |
| SF3639 | 1 | 15 | -0.120754 | hypothetical protein | |
| SF3640 | 2 | 15 | 0.973102 | hypothetical protein | |
| SF3641 | 1 | 15 | 1.533679 | hypothetical protein | |
| SF3642 | -1 | 12 | 3.059907 | L-lactate permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3640 | OMADHESIN | 63 | 5e-13 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3641 | PF03895 | 67 | 6e-16 | Serum resistance protein DsrA. | |
>PF03895#Serum resistance protein DsrA. | |||||
| 50 | SF3657 | SF3666 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3657 | 0 | 16 | -5.044327 | 2-amino-3-ketobutyrate CoA ligase | |
| SF3658 | 1 | 27 | -8.386435 | hypothetical protein | |
| SF3659 | 2 | 28 | -9.480884 | ADP-L-glycero-D-manno-heptose-6-epimerase | |
| SF3660 | 3 | 38 | -12.165224 | ADP-heptose:LPS heptosyltransferase II | |
| SF3661 | 4 | 48 | -16.060369 | ADP-heptose:LPS heptosyl transferase I | |
| SF3662 | 4 | 47 | -16.772249 | O-antigen ligase RfaL | |
| SF3663 | 3 | 42 | -14.246882 | lipopolysaccharide | |
| SF3664 | 3 | 36 | -12.398973 | UDP-glucose:(galactosyl) LPS | |
| SF3665 | 1 | 29 | -9.659794 | lipopolysaccharide core biosynthesis protein | |
| SF3666 | 0 | 25 | -7.263267 | lipopolysaccharide 1,3-galactosyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3659 | NUCEPIMERASE | 104 | 7e-28 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3666 | RTXTOXINA | 32 | 0.003 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 51 | SF3698 | SF3737 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3698 | 2 | 27 | -4.577914 | *integrase | |
| SF3699 | 0 | 23 | -1.524341 | hypothetical protein | |
| SF3700 | 0 | 25 | 0.026908 | hypothetical protein | |
| SF3703 | 0 | 23 | -0.058843 | hypothetical protein | |
| SF3706 | 0 | 24 | -0.057892 | insertion sequence element IS629 protein | |
| SF3707 | 1 | 28 | -3.525372 | hypothetical protein | |
| SF3708 | 3 | 26 | -1.027041 | IS2 transposase TnpB | |
| SF3709 | 5 | 21 | -0.880505 | IS2 repressor TnpA | |
| SF3710 | 4 | 20 | 0.074783 | hypothetical protein | |
| SF3712 | 4 | 19 | 0.981507 | insertion element IS1 protein InsB | |
| SF3713 | 4 | 19 | -0.058079 | hypothetical protein | |
| SF3714 | 4 | 18 | 1.247648 | membrane transport protein | |
| SF3715 | 3 | 17 | -0.421761 | siderophore biosynthesis protein | |
| SF3716 | 3 | 19 | -0.448498 | siderophore biosynthesis protein | |
| SF3717 | 3 | 18 | -1.130240 | siderophore biosynthesis protein | |
| SF3718 | 3 | 19 | -3.120184 | lysine:N6-hydroxylase | |
| SF3719 | 3 | 18 | -2.501106 | ferric siderophore receptor | |
| SF3720 | 2 | 25 | -3.648488 | serine protease-like protein | |
| SF3721 | 1 | 24 | -3.562733 | IS2 transposase TnpB | |
| SF3722 | 2 | 19 | -4.112992 | IS2 repressor TnpA | |
| SF3723 | 0 | 13 | -3.190561 | long polar fimbriae | |
| SF3724 | -1 | 18 | -0.388385 | insertion element IS1 protein InsB | |
| SF3725 | -1 | 21 | -0.238101 | insertion element IS1 protein InsA | |
| SF3726 | -2 | 22 | -0.217457 | fimbrial protein | |
| SF3727 | -3 | 21 | -0.047790 | phosphate ABC transporter substrate-binding | |
| SF3728 | -2 | 14 | -0.163000 | high-affinity phosphate ABC transporter | |
| SF3729 | -2 | 13 | -0.656585 | phosphate ABC transporter permease subunit PtsA | |
| SF3730 | -2 | 11 | -1.576399 | phosphate ABC transporter ATP-binding protein | |
| SF3731 | -2 | 12 | -3.293550 | transcriptional regulator PhoU | |
| SF3732 | -1 | 13 | -3.394962 | transcriptional antiterminator BglG | |
| SF3733 | 0 | 13 | -2.463713 | PTS system beta-glucoside-specific transporter | |
| SF3735 | 0 | 15 | -2.685663 | insertion element IS1 protein InsA | |
| SF3736 | 1 | 16 | -2.763152 | insertion element IS1 protein InsB | |
| SF3737 | 1 | 17 | -3.515274 | receptor protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3703 | RTXTOXIND | 26 | 0.024 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3714 | TCRTETA | 48 | 5e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3715 | PF04183 | 339 | e-111 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3717 | PF04183 | 816 | 0.0 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3720 | IGASERPTASE | 80 | 2e-19 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3723 | PF00577 | 756 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 52 | SF3785 | SF3815 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3785 | 3 | 15 | 2.752801 | hypothetical protein | |
| SF3786 | 2 | 16 | 3.050370 | hypothetical protein | |
| SF3787 | 1 | 19 | 3.828744 | hypothetical protein | |
| SF3788 | 1 | 18 | 4.451465 | transcriptional regulator | |
| SF3789 | 1 | 18 | 4.402823 | multidrug resistance protein D | |
| SF3790 | 0 | 17 | 3.413714 | acetolactate synthase catalytic subunit | |
| SF3791 | -1 | 15 | 2.975084 | acetolactate synthase 1 regulatory subunit | |
| SF3792 | -1 | 15 | 1.836794 | DNA-binding transcriptional activator UhpA | |
| SF3793 | -1 | 15 | 1.325900 | sensory histidine kinase UhpB | |
| SF3794 | 1 | 15 | 0.425279 | regulatory protein UhpC | |
| SF3795 | 0 | 13 | -0.560104 | sugar phosphate antiporter | |
| SF3796 | 1 | 18 | -1.161183 | cryptic adenine deaminase | |
| SF3797 | 0 | 17 | -2.575493 | hypothetical protein | |
| SF3798 | 0 | 22 | -5.449206 | hypothetical protein | |
| SF3799 | 0 | 24 | -5.637915 | transporter | |
| SF3800 | 1 | 29 | -5.673831 | transporter | |
| SF3801 | 2 | 28 | -5.230821 | insertion sequence element IS600 transposase | |
| SF3802 | 2 | 25 | -3.315400 | insertion sequence element IS600 protein | |
| SF3804 | 0 | 18 | -2.081727 | serine protease-like protein | |
| SF3805 | 0 | 14 | 1.052524 | IS2 repressor TnpA | |
| SF3806 | 0 | 14 | 1.338321 | IS2 transposase TnpB | |
| SF3807 | 1 | 21 | 1.461778 | fimbrial protein | |
| SF3808 | 1 | 22 | 1.939023 | insertion sequence IS4 transposase InsG | |
| SF3809 | 3 | 35 | 1.841838 | glucosamine--fructose-6-phosphate | |
| SF3810 | 3 | 34 | 1.627145 | bifunctional N-acetylglucosamine-1-phosphate | |
| SF3811 | 4 | 39 | 1.679203 | ATP synthase F0F1 subunit epsilon | |
| SF3812 | 4 | 40 | 1.568252 | ATP synthase F0F1 subunit beta | |
| SF3813 | 3 | 33 | 0.466263 | ATP synthase F0F1 subunit gamma | |
| SF3814 | 4 | 33 | 0.169744 | ATP synthase F0F1 subunit alpha | |
| SF3815 | 2 | 20 | -1.162729 | ATP synthase F0F1 subunit delta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3789 | TCRTETB | 46 | 9e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3792 | HTHFIS | 61 | 2e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3793 | PF06580 | 40 | 2e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3794 | TCRTETB | 41 | 8e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3795 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3796 | UREASE | 40 | 3e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3799 | TCRTETA | 39 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3804 | IGASERPTASE | 185 | 2e-54 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3810 | RTXTOXINA | 29 | 0.047 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 53 | SF3926 | SF3944 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3926 | -1 | 16 | -3.065858 | protoporphyrinogen oxidase | |
| SF3927 | -1 | 21 | -5.900050 | *molybdopterin-guanine dinucleotide biosynthesis | |
| SF3928 | -2 | 20 | -6.284356 | molybdopterin-guanine dinucleotide biosynthesis | |
| SF3929 | -1 | 22 | -7.555635 | hypothetical protein | |
| SF3930 | -2 | 16 | -4.645731 | serine/threonine protein kinase | |
| SF3931 | -2 | 14 | -4.304730 | periplasmic protein disulfide isomerase I | |
| SF3932 | -1 | 15 | -3.971364 | hypothetical protein | |
| SF3933 | 0 | 13 | -1.402219 | acyltransferase | |
| SF3933a | 1 | 15 | 0.484981 | hypothetical protein | |
| SF3934 | 0 | 14 | 1.318136 | DNA polymerase I | |
| SF3935 | 0 | 16 | 1.842354 | hypothetical protein | |
| SF3936 | 2 | 22 | 1.779846 | Der GTPase activator | |
| SF3937 | 1 | 20 | 1.431312 | coproporphyrinogen III oxidase | |
| SF3938 | 1 | 17 | 0.226523 | nitrogen regulation protein NR(I) | |
| SF3939 | 1 | 17 | -1.730247 | nitrogen regulation protein NR(II) | |
| SF3940 | 2 | 20 | -2.318885 | glutamine synthetase | |
| SF3941 | 1 | 13 | -2.931771 | GTP-binding protein | |
| SF3942 | 0 | 18 | -5.629480 | transcriptional regulator | |
| SF3943 | 0 | 19 | -6.548850 | hypothetical protein | |
| SF3944 | 0 | 13 | -3.383580 | resistance protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3936 | SECA | 30 | 0.004 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3938 | HTHFIS | 597 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3939 | PF06580 | 28 | 0.042 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3941 | TCRTETOQM | 180 | 4e-51 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 54 | SF4010 | SF4018 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4010 | 3 | 12 | 2.976316 | ATP-dependent protease subunit HslV | |
| SF4011 | 2 | 13 | 3.034821 | essential cell division protein FtsN | |
| SF4012 | 1 | 13 | 2.534731 | DNA-binding transcriptional regulator CytR | |
| SF4013 | 2 | 16 | 4.230848 | primosome assembly protein PriA | |
| SF4014 | 0 | 18 | 3.157011 | 50S ribosomal protein L31 | |
| SF4015 | -1 | 17 | 3.517392 | hypothetical protein | |
| SF4016 | -2 | 17 | 3.577573 | transcriptional repressor protein MetJ | |
| SF4017 | -2 | 17 | 3.490552 | cystathionine gamma-synthase | |
| SF4018 | -2 | 18 | 3.327175 | bifunctional aspartate kinase II/homoserine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4011 | IGASERPTASE | 42 | 2e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 55 | SF4182 | SF4218 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4182 | 2 | 24 | -0.008237 | insertion sequence element ISSfl4 transposase | |
| SF4184 | -1 | 24 | -0.013688 | insertion sequence element ISSfl4 transposase | |
| SF4185 | -1 | 17 | 1.395104 | IS2 repressor TnpA | |
| SF4186 | -2 | 15 | 1.197695 | IS2 transposase TnpB | |
| SF4187 | 0 | 16 | 0.370222 | hypothetical protein | |
| SF4188 | -1 | 15 | 0.974502 | hypothetical protein | |
| SF4189 | -1 | 16 | 1.071827 | hypothetical protein | |
| SF4190 | -1 | 18 | -1.731744 | isoaspartyl dipeptidase | |
| SF4191 | 2 | 17 | -2.996016 | cell density-dependent motility repressor | |
| SF4192 | 1 | 16 | -0.461539 | DNA replication/recombination/repair protein | |
| SF4193 | -1 | 18 | 0.480887 | insertion element IS1 protein InsB | |
| SF4194 | 0 | 17 | 0.590080 | insertion element IS1 protein InsA | |
| SF4195 | -2 | 15 | 0.162465 | hypothetical protein | |
| SF4196 | -1 | 17 | 1.889828 | DNA-binding transcriptional repressor UxuR | |
| SF4197 | -1 | 16 | 1.518208 | D-mannonate oxidoreductase | |
| SF4198 | 0 | 15 | 0.182573 | mannonate dehydratase | |
| SF4199 | 3 | 15 | -0.464691 | fructuronate transporter | |
| SF4200 | 1 | 22 | -2.606953 | minor fimbrial subunit, D-mannose specific | |
| SF4201 | 1 | 24 | -2.593371 | minor fimbrial subunit | |
| SF4202 | 0 | 23 | -2.857609 | minor fimbrial subunit | |
| SF4203 | -1 | 24 | -3.122733 | insertion element IS1 protein InsB | |
| SF4204 | 1 | 30 | -4.711374 | insertion element IS1 protein InsA | |
| SF4206 | 1 | 30 | -5.996152 | periplasmic chaperone | |
| SF4207 | 1 | 30 | -6.375904 | fimbrial protein | |
| SF4208 | 1 | 30 | -6.355259 | major type 1 subunit fimbrin | |
| SF4209 | 1 | 28 | -6.426883 | tyrosine recombinase | |
| SF4210 | 0 | 27 | -6.223119 | recombinase | |
| SF4211 | 1 | 25 | -5.620487 | hypothetical protein | |
| SF4212 | -1 | 23 | -4.696443 | N-acetylneuraminic acid mutarotase | |
| SF4213 | 1 | 21 | -2.631164 | hypothetical protein | |
| SF4214 | 2 | 23 | -2.867648 | insertion element IS1 protein InsB | |
| SF4215 | 2 | 22 | -2.594044 | insertion element IS1 protein InsA | |
| SF4216 | 2 | 23 | -3.375214 | DeoR family transcriptional regulator | |
| SF4217 | 3 | 23 | -1.186177 | hypothetical protein | |
| SF4218 | 2 | 24 | -0.916163 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4182 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4190 | UREASE | 35 | 4e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4199 | PF06580 | 31 | 0.008 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4200 | SURFACELAYER | 28 | 0.047 | Lactobacillus surface layer protein signature. | |
>SURFACELAYER#Lactobacillus surface layer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4201 | VACCYTOTOXIN | 33 | 4e-04 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4217 | HTHFIS | 27 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 56 | SF4283 | SF4288 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4283 | 3 | 20 | -0.377263 | hypothetical protein | |
| SF4284 | 4 | 21 | -0.678835 | insertion element IS1 protein InsB | |
| SF4285 | 2 | 14 | 0.064639 | insertion sequence element IS600 protein | |
| SF4286 | 2 | 13 | 0.136412 | lysine/cadaverine transporter | |
| SF4287 | 2 | 15 | 0.968368 | insertion element IS1 protein InsA | |
| SF4288 | 2 | 20 | -0.065434 | insertion element IS1 protein InsB |
| 57 | SF4319 | SF4334 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4319 | -1 | 14 | 3.035007 | hypothetical protein | |
| SF4322 | -1 | 13 | 3.063241 | ****hypothetical protein | |
| SF4321 | -1 | 13 | 3.166049 | carbohydrate kinase | |
| SF4323 | -1 | 13 | 2.411698 | ADP-binding protein | |
| SF4324 | -1 | 12 | 2.865903 | N-acetylmuramoyl-L-alanine amidase | |
| SF4325 | 0 | 13 | 2.531190 | DNA mismatch repair protein | |
| SF4326 | 2 | 18 | 1.589689 | tRNA delta(2)-isopentenylpyrophosphate | |
| SF4327 | 4 | 24 | 1.673434 | RNA-binding protein Hfq | |
| SF4328 | 4 | 22 | 1.585546 | GTPase HflX | |
| SF4329 | 4 | 22 | 2.054318 | FtsH protease regulator HflK | |
| SF4330 | 4 | 22 | 1.849989 | FtsH protease regulator HflC | |
| SF4331 | 3 | 21 | 2.009187 | hypothetical protein | |
| SF4332 | 4 | 20 | 2.063474 | adenylosuccinate synthetase | |
| SF4333 | 3 | 15 | 1.556064 | transcriptional repressor NsrR | |
| SF4334 | 2 | 15 | 1.849534 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4328 | SECA | 32 | 0.005 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4329 | cloacin | 32 | 0.006 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4334 | RTXTOXIND | 31 | 0.026 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 58 | SF4353a | SF4368 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4353a | 3 | 29 | -1.932917 | membrane protein | |
| SF4354 | 4 | 33 | -0.362989 | 30S ribosomal protein S6 | |
| SF4353b | 5 | 31 | -0.641926 | primosomal replication protein N | |
| SF4355 | 5 | 29 | -1.274626 | 30S ribosomal protein S18 | |
| SF4356 | 3 | 26 | -2.188987 | 50S ribosomal protein L9 | |
| SF4358 | 3 | 22 | -1.818469 | hypothetical protein | |
| SF4359 | 1 | 22 | -5.767671 | hypothetical protein | |
| SF4360 | 0 | 18 | -5.389222 | insertion sequence element IS600 protein | |
| SF4361 | 0 | 15 | -4.877846 | insertion sequence element IS600 transposase | |
| SF4362 | 0 | 14 | -4.591531 | hypothetical protein | |
| SF4363 | -1 | 13 | -4.116277 | endoribonuclease SymE | |
| SF4364 | -2 | 12 | -3.428838 | hypothetical protein | |
| SF4365 | -2 | 17 | -0.382374 | restriction modification enzyme M subunit | |
| SF4366 | -1 | 20 | -0.004275 | Type I restriction enzyme EcoAI R protein | |
| SF4367 | 1 | 26 | 3.159234 | insertion element IS1 protein InsA | |
| SF4368 | 1 | 26 | 3.184149 | insertion element IS1 protein InsB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4358 | HTHFIS | 27 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 59 | SF0330 | SF0337 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0330 | 1 | 16 | 1.274510 | NagC-like transcriptional regulator | |
| SF0333 | 1 | 12 | 1.529635 | MFS transport protein AraJ | |
| SF0334 | 0 | 13 | 1.786740 | exonuclease SbcC | |
| SF0335 | -1 | 12 | 1.803760 | exonuclease SbcD | |
| SF0336 | 0 | 14 | 1.923073 | transcriptional regulator PhoB | |
| SF0337 | 0 | 13 | 1.470774 | phosphate regulon sensor protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0330 | ACETATEKNASE | 29 | 0.021 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0333 | TCRTETA | 53 | 1e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0334 | RTXTOXIND | 39 | 7e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0335 | FRAGILYSIN | 31 | 0.010 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0336 | HTHFIS | 95 | 1e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0337 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 60 | SF0377 | SF0385 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0377 | 0 | 18 | -0.427346 | muropeptide transporter | |
| SF0378 | 2 | 27 | -1.271972 | polymerase/proteinase | |
| SF0379 | 4 | 25 | -0.620596 | murein genes regulator | |
| SF0380 | 3 | 27 | -0.536111 | hypothetical protein | |
| SF0381 | 3 | 26 | -0.201769 | trigger factor | |
| SF0382 | 0 | 19 | 0.082362 | ATP-dependent Clp protease proteolytic subunit | |
| SF0383 | 1 | 20 | -0.174252 | ATP-dependent protease ATP-binding subunit ClpX | |
| SF0384 | 0 | 18 | -0.222617 | DNA-binding ATP-dependent protease La | |
| SF0385 | -1 | 13 | -0.389406 | transcriptional regulator HU subunit beta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0377 | TCRTETA | 39 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0378 | PF06291 | 29 | 0.006 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0383 | HTHFIS | 29 | 0.043 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0384 | GPOSANCHOR | 35 | 0.001 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0385 | DNABINDINGHU | 117 | 3e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 61 | SF0402 | SF0415 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0402 | 0 | 13 | -1.174100 | hypothetical protein | |
| SF0403 | 2 | 16 | -0.959059 | hypothetical protein | |
| SF0405 | 0 | 15 | -0.426251 | gene expression modulator | |
| SF0406 | 0 | 14 | -0.230555 | Hha toxicity attenuator | |
| SF0407 | 0 | 15 | 0.662550 | multidrug efflux system protein AcrB | |
| SF0408 | 1 | 12 | 0.072911 | multidrug efflux system transporter AcrA | |
| SF0409 | 1 | 14 | -0.116117 | DNA-binding transcriptional repressor AcrR | |
| SF0410 | 2 | 14 | 2.052489 | hypothetical protein | |
| SF0411 | 4 | 16 | 3.771721 | hypothetical protein | |
| SF0412 | 3 | 16 | 4.335160 | primosomal replication protein N'' | |
| SF0413 | 3 | 22 | 2.836400 | hypothetical protein | |
| SF0414 | 3 | 26 | 2.660582 | adenine phosphoribosyltransferase | |
| SF0415 | 2 | 22 | 2.697059 | DNA polymerase III subunits gamma and tau |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0402 | BCTERIALGSPF | 30 | 0.026 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0407 | ACRIFLAVINRP | 1361 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0408 | RTXTOXIND | 45 | 3e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0409 | HTHTETR | 222 | 5e-76 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0410 | RTXTOXIND | 32 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0415 | IGASERPTASE | 39 | 7e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 62 | SF0505 | SF0510 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0505 | 0 | 18 | 4.504594 | enterobactin exporter EntS | |
| SF0506 | -1 | 20 | 4.574070 | iron-enterobactin ABC transporter | |
| SF0508 | -1 | 21 | 4.514306 | enterobactin synthase subunit E | |
| SF0509 | 0 | 19 | 4.404245 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | |
| SF0510 | -1 | 17 | 4.055559 | 2,3-dihydroxybenzoate-2,3-dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0505 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0506 | FERRIBNDNGPP | 63 | 2e-13 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0509 | ISCHRISMTASE | 444 | e-161 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0510 | DHBDHDRGNASE | 359 | e-129 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 63 | SF0742 | SF0747 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0742 | -2 | 20 | 2.885999 | hypothetical protein | |
| SF0743 | -2 | 18 | 2.942352 | hypothetical protein | |
| SF0744 | -2 | 17 | 2.629055 | ABC transporter ATP-binding protein | |
| SF0745 | -2 | 13 | 2.568786 | efflux pump membrane fusion protein | |
| SF0746 | -1 | 14 | 2.348973 | DNA-binding transcriptional regulator | |
| SF0747 | -1 | 13 | 2.201813 | ATP-dependent RNA helicase RhlE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0742 | ABC2TRNSPORT | 47 | 3e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0744 | PF05272 | 31 | 0.012 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0745 | RTXTOXIND | 63 | 5e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0746 | HTHTETR | 73 | 6e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0747 | SECA | 31 | 0.013 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 64 | SF0795 | SF0800 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0795 | 1 | 14 | -0.516067 | multidrug efflux system translocase MdfA | |
| SF0796 | 0 | 16 | -0.881307 | hypothetical protein | |
| SF0797 | 0 | 17 | -1.317707 | hypothetical protein | |
| SF0798 | -1 | 15 | -0.515238 | DeoR family transcriptional regulator | |
| SF0799 | -2 | 19 | -3.109361 | DeoR family transcriptional regulator | |
| SF0800 | -2 | 16 | -3.100872 | transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0795 | TCRTETB | 39 | 3e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0798 | PF05272 | 33 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0799 | HTHTETR | 46 | 1e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0800 | TCRTETA | 32 | 0.006 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 65 | SF0818 | SF0824 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF0818 | 1 | 15 | -5.072567 | arginine transporter ATP-binding subunit | |
| SF0819 | 1 | 16 | -3.864914 | lipoprotein | |
| SF0820 | 1 | 14 | -3.037396 | hypothetical protein | |
| SF0821 | 0 | 13 | 2.640986 | hypothetical protein | |
| SF0822 | 0 | 13 | 2.791196 | regulator | |
| SF0823 | -2 | 14 | 2.603040 | nucleotide di-P-sugar epimerase or dehydratase | |
| SF0824 | -2 | 12 | 1.952194 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0818 | PF05272 | 30 | 0.010 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0822 | ECOLIPORIN | 30 | 0.010 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0823 | NUCEPIMERASE | 74 | 6e-17 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF0824 | NUCEPIMERASE | 56 | 2e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 66 | SF1080 | SF1088 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1080 | 0 | 12 | 2.138965 | flagellar hook protein FlgE | |
| SF1082 | 0 | 14 | 2.187482 | flagellar basal body rod protein FlgG | |
| SF1083 | 1 | 14 | 1.926700 | flagellar basal body L-ring protein | |
| SF1084 | 1 | 14 | 1.515263 | flagellar basal body P-ring biosynthesis protein | |
| SF1085 | 2 | 16 | 1.216909 | flagellar rod assembly protein/muramidase FlgJ | |
| SF1088 | 3 | 17 | 1.127202 | RNase E |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1080 | FLGHOOKAP1 | 40 | 4e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1082 | FLGHOOKAP1 | 44 | 4e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1083 | FLGLRINGFLGH | 349 | e-126 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1084 | FLGPRINGFLGI | 427 | e-152 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1085 | FLGFLGJ | 503 | 0.0 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1088 | IGASERPTASE | 68 | 2e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 67 | SF1201 | SF1205 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1201 | -1 | 16 | -1.443293 | dihydroxyacetone kinase subunit M | |
| SF1202 | -2 | 13 | -1.311125 | dihydroxyacetone kinase subunit DhaL | |
| SF1203 | -2 | 14 | -1.602497 | dihydroxyacetone kinase subunit DhaK | |
| SF1204 | -1 | 15 | -1.827758 | DNA-binding transcriptional regulator DhaR | |
| SF1205 | 1 | 15 | -1.056976 | adhesion and penetration protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1201 | PHPHTRNFRASE | 140 | 2e-38 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1202 | adhesinmafb | 28 | 0.020 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1204 | HTHFIS | 244 | 1e-75 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1205 | PRTACTNFAMLY | 212 | 3e-59 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 68 | SF1223 | SF1226 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1223 | -2 | 15 | 1.534053 | invasin | |
| SF1224 | -2 | 18 | 1.917725 | transcriptional regulator NarL | |
| SF1225 | -1 | 20 | 2.185854 | nitrate/nitrite sensor protein NarX | |
| SF1226 | -2 | 23 | 1.691905 | nitrate transport protein NarK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1223 | INTIMIN | 254 | 2e-78 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1224 | HTHFIS | 74 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1225 | PF06580 | 53 | 1e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1226 | ACRIFLAVINRP | 33 | 0.004 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 69 | SF1685 | SF1697 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1685 | 0 | 14 | -0.422373 | transporter | |
| SF1687 | 0 | 15 | -1.172284 | DNA-binding transcriptional regulator | |
| SF1688 | -1 | 18 | -1.366050 | transporter | |
| SF1689 | 0 | 20 | -2.179046 | cyclopropane fatty acyl phospholipid synthase | |
| SF1690 | 0 | 22 | -1.786390 | riboflavin synthase subunit alpha | |
| SF1694 | -1 | 21 | -1.133732 | hypothetical protein | |
| SF1695 | -2 | 16 | -2.155625 | *monooxygenase | |
| SF1697 | -2 | 15 | -1.951692 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1685 | TCRTETA | 46 | 2e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1688 | TCRTETB | 75 | 8e-17 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1694 | IGASERPTASE | 30 | 0.023 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1697 | ICENUCLEATIN | 29 | 0.026 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| 70 | SF1931 | SF1939 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1931 | 1 | 14 | 1.016129 | chemotaxis regulatory protein CheY | |
| SF1932 | 0 | 12 | 1.263106 | chemotaxis-specific methylesterase | |
| SF1933 | 0 | 12 | 1.176984 | chemotaxis methyltransferase CheR | |
| SF1934 | 0 | 13 | 0.920495 | methyl-accepting protein IV | |
| SF1935 | -1 | 14 | 0.345057 | methyl-accepting chemotaxis protein II | |
| SF1936 | -2 | 14 | 0.259545 | purine-binding chemotaxis protein | |
| SF1937 | -1 | 14 | 0.367840 | chemotaxis protein CheA | |
| SF1938 | -1 | 17 | -0.365333 | flagellar motor protein MotB | |
| SF1939 | -3 | 12 | -0.913285 | flagellar motor protein MotA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1931 | HTHFIS | 90 | 4e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1932 | HTHFIS | 65 | 9e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1937 | PF06580 | 42 | 4e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1938 | PF05272 | 31 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1939 | PF05844 | 33 | 0.001 | YopD protein | |
>PF05844#YopD protein | |||||
| 71 | SF1966 | SF1995 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF1966 | -1 | 12 | -1.545680 | flagellin | |
| SF1967 | -2 | 16 | 0.071176 | flagellar capping protein | |
| SF1968 | -1 | 14 | -0.198742 | flagellar protein FliS | |
| SF1969 | -1 | 13 | -1.621292 | flagellar biosynthesis protein FliT | |
| SF1970 | -1 | 12 | -3.624710 | cytoplasmic alpha-amylase | |
| SF1971 | 1 | 22 | -4.881812 | lipoprotein | |
| SF1972 | 2 | 27 | -6.180130 | hypothetical protein | |
| SF1973 | 4 | 36 | -8.505129 | hypothetical protein | |
| SF1977 | 1 | 24 | -5.629539 | porin | |
| SF1978 | 2 | 23 | -2.904975 | regulator | |
| SF1979 | 0 | 17 | 2.044716 | kinase inhibitor | |
| SF1980 | 1 | 18 | 3.276518 | multidrug efflux protein | |
| SF1982 | 1 | 18 | 3.905880 | flagellar hook-basal body protein FliE | |
| SF1984 | 1 | 18 | 3.688263 | flagellar motor switch protein G | |
| SF1985 | -1 | 17 | 3.048522 | flagellar assembly protein H | |
| SF1986 | -2 | 18 | 2.801276 | flagellum-specific ATP synthase | |
| SF1987 | -2 | 16 | 1.719021 | flagellar biosynthesis chaperone FliJ | |
| SF1988 | -2 | 17 | 1.793737 | flagellar hook-length control protein | |
| SF1989 | -2 | 22 | 1.325900 | flagellar basal body protein FliL | |
| SF1990 | 1 | 19 | -0.034524 | flagellar motor switch protein FliM | |
| SF1991 | 2 | 19 | -3.218047 | flagellar motor switch protein FliN | |
| SF1992 | 1 | 21 | -4.122128 | flagellar protein FliO | |
| SF1993 | 1 | 21 | -4.994159 | flagellar biosynthesis protein FliP | |
| SF1994 | 0 | 17 | -3.598723 | flagellar biosynthesis protein FliQ | |
| SF1995 | -1 | 18 | -3.624028 | flagellar biosynthesis protein FliR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1966 | FLAGELLIN | 234 | 9e-73 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1967 | TYPE3OMBPROT | 32 | 0.005 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1972 | RTXTOXIND | 30 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1973 | PF01206 | 93 | 6e-29 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1977 | ECOLIPORIN | 509 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1978 | HTHFIS | 29 | 0.017 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1982 | FLGHOOKFLIE | 117 | 8e-38 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1984 | FLGMOTORFLIG | 338 | e-118 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1985 | FLGFLIH | 373 | e-135 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1987 | FLGFLIJ | 152 | 5e-51 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1988 | FLGHOOKFLIK | 468 | e-168 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1990 | FLGMOTORFLIM | 380 | e-134 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1991 | FLGMOTORFLIN | 210 | 6e-74 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1993 | FLGBIOSNFLIP | 281 | 4e-99 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1994 | TYPE3IMQPROT | 67 | 1e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF1995 | TYPE3IMRPROT | 203 | 4e-67 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| 72 | SF2139 | SF2151 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2139 | -1 | 18 | 3.158113 | acriflavin resistance protein AcrA-like protein | |
| SF2141 | -1 | 18 | 3.200526 | multidrug efflux system subunit MdtC | |
| SF2142 | -2 | 12 | 1.025281 | transporter | |
| SF2143 | -1 | 9 | -0.265849 | signal transduction histidine-protein kinase | |
| SF2144 | 1 | 12 | -2.084952 | DNA-binding transcriptional regulator BaeR | |
| SF2145 | 1 | 14 | -3.010950 | hypothetical protein | |
| SF2146 | 0 | 13 | -2.655981 | protease | |
| SF2148 | 0 | 23 | -4.115627 | hypothetical protein | |
| SF2149 | 3 | 18 | -2.354875 | lipid kinase | |
| SF2150 | 2 | 20 | -2.781502 | galactitol utilization operon repressor | |
| SF2151 | 1 | 21 | -3.097530 | galactitol-1-phosphate dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2139 | RTXTOXIND | 44 | 5e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2141 | ACRIFLAVINRP | 905 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2142 | TCRTETB | 125 | 2e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2143 | BCTERIALGSPF | 31 | 0.009 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2144 | HTHFIS | 76 | 6e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2148 | LIPOLPP20 | 27 | 0.026 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2151 | DHBDHDRGNASE | 34 | 7e-04 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 73 | SF2434 | SF2437 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF2434 | 0 | 36 | -9.965891 | multidrug resistance protein Y | |
| SF2435 | 0 | 36 | -9.109737 | multidrug resistance protein K | |
| SF2436 | 1 | 34 | -8.366940 | DNA-binding transcriptional activator EvgA | |
| SF2437 | 1 | 34 | -7.998789 | hybrid sensory histidine kinase in two-component |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2434 | TCRTETB | 119 | 3e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2435 | RTXTOXIND | 77 | 1e-17 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2436 | HTHFIS | 49 | 3e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF2437 | HTHFIS | 80 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 74 | SF3186 | SF3193 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3186 | 0 | 13 | 0.576756 | fimbrial protein | |
| SF3187 | 1 | 12 | 2.390968 | SAM-dependent 16S ribosomal RNA C1402 ribose | |
| SF3188 | 0 | 13 | 2.502150 | glycosylase | |
| SF3189 | 0 | 16 | 1.840721 | hypothetical protein | |
| SF3190 | 1 | 17 | 1.767606 | chromosome replication initiator DnaA | |
| SF3191 | 1 | 18 | 2.485079 | outer membrane lipoprotein | |
| SF3192 | 0 | 20 | 2.689794 | hypothetical protein | |
| SF3193 | 0 | 20 | 1.272885 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3186 | FIMBRIALPAPF | 29 | 0.022 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3188 | IGASERPTASE | 30 | 0.029 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3190 | RTXTOXINA | 28 | 0.036 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3193 | NUCEPIMERASE | 29 | 0.013 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 75 | SF3275 | SF3281 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3275 | -3 | 13 | -0.775808 | serine endoprotease | |
| SF3276 | -2 | 12 | -0.588776 | malate dehydrogenase | |
| SF3277 | -2 | 12 | -0.979793 | arginine repressor ArgR | |
| SF3278 | -3 | 13 | -0.338627 | hypothetical protein | |
| SF3279 | -2 | 12 | 0.671292 | hypothetical protein | |
| SF3280 | -3 | 10 | 1.212325 | p-hydroxybenzoic acid efflux subunit AaeB | |
| SF3281 | -2 | 10 | 1.178758 | p-hydroxybenzoic acid efflux subunit AaeA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3275 | V8PROTEASE | 53 | 8e-10 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3276 | DHBDHDRGNASE | 28 | 0.045 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3277 | ARGREPRESSOR | 169 | 4e-57 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3281 | RTXTOXIND | 53 | 5e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 76 | SF3364 | SF3371 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3364 | 1 | 20 | -1.184587 | hypothetical protein | |
| SF3365 | 2 | 18 | 1.489070 | FKBP-type peptidylprolyl isomerase | |
| SF3366 | -1 | 18 | 2.525900 | phi X174 lysis protein | |
| SF3367 | -1 | 19 | 2.348123 | FKBP-type peptidylprolyl isomerase | |
| SF3368 | -1 | 17 | 2.020606 | hypothetical protein | |
| SF3370 | -1 | 17 | 2.096520 | glutathione-regulated potassium-efflux system | |
| SF3371 | -1 | 17 | 1.329850 | ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3364 | ACRIFLAVINRP | 29 | 0.021 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3365 | INFPOTNTIATR | 133 | 2e-40 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3370 | ISCHRISMTASE | 32 | 0.001 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3371 | GPOSANCHOR | 33 | 0.005 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 77 | SF3463 | SF3471 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3463 | -2 | 15 | 0.331748 | acetyltransferase YhhY | |
| SF3464 | -2 | 17 | 0.845573 | gamma-glutamyltranspeptidase | |
| SF3465 | 0 | 17 | 0.279068 | hypothetical protein | |
| SF3466 | 0 | 19 | 0.965635 | cytoplasmic glycerophosphodiester | |
| SF3467 | 0 | 19 | 0.674559 | insertion element iso-IS10R transposase | |
| SF3469 | -1 | 25 | 3.026124 | glycerol-3-phosphate ABC transporter permease | |
| SF3470 | -2 | 25 | 3.287883 | glycerol-3-phosphate transporter permease | |
| SF3471 | -1 | 23 | 3.095609 | glycerol-3-phosphate ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3463 | SACTRNSFRASE | 37 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3464 | NAFLGMOTY | 32 | 0.007 | Sodium-type flagellar protein MotY precursor signature. | |
>NAFLGMOTY#Sodium-type flagellar protein MotY precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3466 | PF04619 | 28 | 0.017 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3471 | MALTOSEBP | 40 | 2e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 78 | SF3498 | SF3503 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3498 | 0 | 19 | 3.825131 | nickel ABC transporter ATP-binding protein NikE | |
| SF3499 | -1 | 14 | -0.230020 | nickel responsive regulator | |
| SF3500 | 1 | 19 | -4.274928 | hypothetical protein | |
| SF3501 | 1 | 20 | -4.811594 | transporter | |
| SF3502 | 1 | 25 | -6.851846 | ABC transporter ATP-binding protein | |
| SF3503 | 2 | 40 | -12.606511 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3498 | HTHFIS | 29 | 0.018 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3501 | ABC2TRNSPORT | 50 | 5e-09 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3502 | PF05272 | 30 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3503 | RTXTOXIND | 84 | 4e-20 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 79 | SF3581 | SF3586 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3581 | 1 | 13 | 1.222808 | resistance protein | |
| SF3583 | 1 | 13 | 1.393928 | lipase | |
| SF3582 | 1 | 10 | 1.280430 | 3-methyladenine DNA glycosylase | |
| SF3584 | 0 | 11 | 1.448874 | acetyltransferase | |
| SF3585 | -1 | 11 | -0.017125 | biotin sulfoxide reductase | |
| SF3586 | 0 | 19 | -2.187419 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3581 | TCRTETA | 43 | 1e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3583 | ECOLNEIPORIN | 28 | 0.039 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3584 | SACTRNSFRASE | 35 | 5e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3586 | OMPADOMAIN | 111 | 1e-31 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 80 | SF3714 | SF3720 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3714 | 4 | 18 | 1.247648 | membrane transport protein | |
| SF3715 | 3 | 17 | -0.421761 | siderophore biosynthesis protein | |
| SF3716 | 3 | 19 | -0.448498 | siderophore biosynthesis protein | |
| SF3717 | 3 | 18 | -1.130240 | siderophore biosynthesis protein | |
| SF3718 | 3 | 19 | -3.120184 | lysine:N6-hydroxylase | |
| SF3719 | 3 | 18 | -2.501106 | ferric siderophore receptor | |
| SF3720 | 2 | 25 | -3.648488 | serine protease-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3714 | TCRTETA | 48 | 5e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3715 | PF04183 | 339 | e-111 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3717 | PF04183 | 816 | 0.0 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3720 | IGASERPTASE | 80 | 2e-19 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 81 | SF3789 | SF3799 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3789 | 1 | 18 | 4.402823 | multidrug resistance protein D | |
| SF3790 | 0 | 17 | 3.413714 | acetolactate synthase catalytic subunit | |
| SF3791 | -1 | 15 | 2.975084 | acetolactate synthase 1 regulatory subunit | |
| SF3792 | -1 | 15 | 1.836794 | DNA-binding transcriptional activator UhpA | |
| SF3793 | -1 | 15 | 1.325900 | sensory histidine kinase UhpB | |
| SF3794 | 1 | 15 | 0.425279 | regulatory protein UhpC | |
| SF3795 | 0 | 13 | -0.560104 | sugar phosphate antiporter | |
| SF3796 | 1 | 18 | -1.161183 | cryptic adenine deaminase | |
| SF3797 | 0 | 17 | -2.575493 | hypothetical protein | |
| SF3798 | 0 | 22 | -5.449206 | hypothetical protein | |
| SF3799 | 0 | 24 | -5.637915 | transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3789 | TCRTETB | 46 | 9e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3792 | HTHFIS | 61 | 2e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3793 | PF06580 | 40 | 2e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3794 | TCRTETB | 41 | 8e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3795 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3796 | UREASE | 40 | 3e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3799 | TCRTETA | 39 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 82 | SF3936 | SF3941 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF3936 | 2 | 22 | 1.779846 | Der GTPase activator | |
| SF3937 | 1 | 20 | 1.431312 | coproporphyrinogen III oxidase | |
| SF3938 | 1 | 17 | 0.226523 | nitrogen regulation protein NR(I) | |
| SF3939 | 1 | 17 | -1.730247 | nitrogen regulation protein NR(II) | |
| SF3940 | 2 | 20 | -2.318885 | glutamine synthetase | |
| SF3941 | 1 | 13 | -2.931771 | GTP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3936 | SECA | 30 | 0.004 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3938 | HTHFIS | 597 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3939 | PF06580 | 28 | 0.042 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF3941 | TCRTETOQM | 180 | 4e-51 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 83 | SF4072 | SF4085 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4072 | 0 | 14 | 3.120076 | transcriptional regulator HU subunit alpha | |
| SF4073 | 0 | 16 | 3.616289 | hypothetical protein | |
| SF4074 | 0 | 17 | 3.592835 | hypothetical protein | |
| SF4075 | -1 | 17 | 3.681421 | sensor protein ZraS | |
| SF4076 | 0 | 21 | 3.892756 | transcriptional regulatory protein ZraR | |
| SF4077 | -1 | 20 | 3.776455 | phosphoribosylamine--glycine ligase | |
| SF4078 | -1 | 18 | 3.363791 | bifunctional | |
| SF4081 | -2 | 16 | 3.003970 | *isocitrate lyase | |
| SF4084 | -1 | 15 | 2.740629 | aceBA operon repressor | |
| SF4085 | -1 | 17 | 2.790269 | B12-dependent methionine synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4072 | DNABINDINGHU | 120 | 2e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4075 | PF06580 | 36 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4076 | HTHFIS | 525 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4081 | BINARYTOXINB | 32 | 0.004 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4085 | BCTERIALGSPD | 34 | 0.004 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| 84 | SF4093 | SF4099 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4093 | -1 | 14 | -0.671589 | sorbitol-6-phosphate 2-dehydrogenase | |
| SF4094 | 0 | 14 | -0.768817 | sor-operon regulator | |
| SF4095 | 0 | 14 | -0.282123 | 23S rRNA pseudouridine synthase F | |
| SF4096 | 0 | 15 | 0.253345 | IS2 transposase TnpB | |
| SF4097 | -1 | 15 | 0.131730 | IS2 repressor TnpA | |
| SF4098 | 0 | 13 | -1.004723 | sensory histidine kinase DcuS | |
| SF4099 | 0 | 13 | -0.557546 | DNA-binding transcriptional activator DcuR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4093 | DHBDHDRGNASE | 115 | 5e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4094 | HTHFIS | 29 | 0.033 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4098 | PF06580 | 41 | 8e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4099 | HTHFIS | 71 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 85 | SF4110 | SF4117 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4110 | -3 | 15 | 0.072160 | DNA-binding transcriptional regulator BasR | |
| SF4111 | -2 | 15 | -0.110855 | sensor protein BasS/PmrB | |
| SF4112 | -1 | 15 | 0.278235 | proline/glycine betaine transporter | |
| SF4113 | 1 | 18 | 1.375362 | hypothetical protein | |
| SF4114 | 0 | 18 | 0.784737 | hypothetical protein | |
| SF4115 | 0 | 28 | 1.829277 | hypothetical protein | |
| SF4116 | 0 | 28 | 2.428796 | hypothetical protein | |
| SF4117 | -1 | 26 | 2.538022 | phosphonate/organophosphate ester transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4110 | HTHFIS | 91 | 2e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4111 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4112 | TCRTETA | 43 | 2e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4117 | PF05272 | 29 | 0.019 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 86 | SF4170 | SF4177 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4170 | -1 | 17 | -0.031566 | maltose ABC transporter ATP-binding protein | |
| SF4171 | 0 | 17 | -0.755923 | maltose ABC transporter substrate-binding | |
| SF4172 | -1 | 13 | 0.209316 | maltose transporter membrane protein | |
| SF4173 | 0 | 10 | 0.657197 | maltose ABC transporter permease | |
| SF4174 | 0 | 10 | 0.532250 | D-xylose transporter XylE | |
| SF4175 | -1 | 14 | 2.286009 | phosphate-starvation-inducible protein PsiE | |
| SF4175a | -1 | 14 | 1.921390 | hypothetical protein | |
| SF4176 | -1 | 15 | 2.238899 | hypothetical protein | |
| SF4177 | 1 | 14 | 1.799349 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4170 | PF05272 | 35 | 6e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4171 | MALTOSEBP | 755 | 0.0 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4172 | FLGHOOKAP1 | 31 | 0.012 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4174 | TCRTETA | 36 | 3e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4177 | CHANLCOLICIN | 31 | 0.006 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 87 | SF4427 | SF4433 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SF4427 | -1 | 17 | 0.684875 | phosphoglycerate mutase | |
| SF4428 | -1 | 14 | 0.081552 | right oriC-binding transcriptional activator | |
| SF4429 | hypothetical protein | ||||
| SF4430 | DNA-binding response regulator CreB | ||||
| SF4431 | sensory histidine kinase CreC | ||||
| SF4432 | hypothetical protein | ||||
| SF4433 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4427 | VACCYTOTOXIN | 29 | 0.014 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4430 | HTHFIS | 87 | 6e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4431 | PF06580 | 33 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SF4433 | HTHFIS | 82 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||