| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | HPSA20_0005 | HPSA20_0015 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0005 | -1 | 14 | 3.662479 | carbonic anhydrase family protein | |
| HPSA20_0006 | -1 | 14 | 3.318121 | orotidine 5'-phosphate decarboxylase / HUMPS | |
| HPSA20_0007 | 0 | 16 | 4.383751 | orotidine 5'-phosphate decarboxylase | |
| HPSA20_0008 | 1 | 17 | 4.405454 | pantoate--beta-alanine ligase | |
| HPSA20_0014 | 0 | 16 | 4.221533 | *****hypothetical protein | |
| HPSA20_0015 | -2 | 14 | 3.766657 | outer membrane family protein |
| 2 | HPSA20_0056 | HPSA20_0101 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0056 | 0 | 14 | -4.306322 | DNA methylase family protein | |
| HPSA20_0057 | 0 | 18 | -5.447809 | C-5 cytosine-specific DNA methylase family | |
| HPSA20_0058 | 2 | 20 | -6.985753 | DNA (cytosine-5-)-methyltransferase family | |
| HPSA20_0059 | -1 | 16 | -4.821912 | HNH endonuclease family protein | |
| HPSA20_0060 | -2 | 10 | -2.216167 | hypothetical protein | |
| HPSA20_0061 | -3 | 9 | -1.318947 | hypothetical protein | |
| HPSA20_0062 | -3 | 9 | -1.000793 | hypothetical protein | |
| HPSA20_0063 | -1 | 9 | -0.890804 | eco57I restriction-modification methylase family | |
| HPSA20_0064 | 0 | 12 | 1.037018 | sodium/proline symporter | |
| HPSA20_0065 | 2 | 14 | 0.188229 | proline dehydrogenase family protein | |
| HPSA20_0066 | 3 | 16 | -0.891715 | putative lipoprotein | |
| HPSA20_0067 | 3 | 15 | -0.897282 | hypothetical protein | |
| HPSA20_0068 | 4 | 14 | -0.622090 | hypothetical protein | |
| HPSA20_0069 | 2 | 13 | -0.549965 | hypothetical protein | |
| HPSA20_0070 | 2 | 13 | -0.382827 | hypothetical protein | |
| HPSA20_0071 | 2 | 11 | -0.391370 | hypothetical protein | |
| HPSA20_0072 | 2 | 10 | 0.183727 | hypothetical protein | |
| HPSA20_0073 | 1 | 8 | 0.529614 | hypothetical protein | |
| HPSA20_0074 | 0 | 8 | 0.644411 | hypothetical protein | |
| HPSA20_0075 | 0 | 8 | 0.685950 | hypothetical protein | |
| HPSA20_0076 | 0 | 9 | 1.261692 | ftsK/SpoIIIE family protein | |
| HPSA20_0077 | 0 | 16 | 2.039232 | ureD urease accessory family protein | |
| HPSA20_0078 | 4 | 23 | 2.877367 | urease accessory protein UreG | |
| HPSA20_0079 | 5 | 24 | 2.526609 | ureF family protein | |
| HPSA20_0080 | 4 | 24 | 2.480822 | ureE urease accessory , N-terminal domain | |
| HPSA20_0081 | 4 | 20 | 2.612824 | amiS/UreI transporter family protein | |
| HPSA20_0082 | 2 | 18 | 2.204544 | hypothetical protein | |
| HPSA20_0083 | 2 | 17 | 2.619599 | urease, alpha subunit | |
| HPSA20_0084 | 0 | 12 | 1.284829 | urease, beta subunit | |
| HPSA20_0086 | -2 | 11 | 1.409690 | *signal peptidase II | |
| HPSA20_0087 | 1 | 14 | 2.489648 | phosphoglucosamine mutase | |
| HPSA20_0088 | 4 | 16 | 2.557855 | ribosomal protein S20 | |
| HPSA20_0089 | 3 | 13 | 2.076982 | peptide chain release factor 1 | |
| HPSA20_0090 | 4 | 14 | 1.887239 | hypothetical protein | |
| HPSA20_0091 | 3 | 14 | 2.182108 | hypothetical protein | |
| HPSA20_0092 | 3 | 14 | 1.651462 | outer membrane family protein | |
| HPSA20_0093 | 2 | 16 | 0.775042 | hypothetical protein | |
| HPSA20_0094 | -2 | 14 | 0.371703 | methyl-accepting chemotaxis (MCP) signaling | |
| HPSA20_0095 | -2 | 16 | 0.181488 | ribosomal S9/S16 family protein | |
| HPSA20_0096 | 0 | 13 | -0.376597 | ribosomal protein L13 | |
| HPSA20_0097 | 0 | 12 | -0.826051 | hypothetical protein | |
| HPSA20_0098 | 0 | 10 | -0.041488 | hypothetical protein | |
| HPSA20_0099 | 0 | 9 | 0.466170 | quinone oxidoreductase family protein | |
| HPSA20_0100 | 1 | 10 | -0.128072 | SH3 domain of the SH3b1 type family protein | |
| HPSA20_0101 | 3 | 11 | -0.206092 | RNA polymerase sigma factor RpoD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0065 | ANTHRAXTOXNA | 32 | 0.020 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0068 | GPOSANCHOR | 40 | 9e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0072 | CHANNELTSX | 27 | 0.012 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0083 | UREASE | 1030 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0092 | PF03544 | 33 | 0.001 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0093 | CABNDNGRPT | 31 | 0.010 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0101 | IGASERPTASE | 35 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 3 | HPSA20_0119 | HPSA20_0124 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0119 | 0 | 14 | 3.335523 | glycosyl transferase 2 family protein | |
| HPSA20_0120 | 0 | 16 | 4.482901 | hypothetical protein | |
| HPSA20_0121 | 1 | 17 | 4.673904 | HAMP domain protein | |
| HPSA20_0122 | -2 | 12 | 4.487038 | hypothetical protein | |
| HPSA20_0123 | -1 | 12 | 4.171520 | S-Ribosylhomocysteinase family protein | |
| HPSA20_0124 | -1 | 13 | 3.613532 | aminotransferase class-V family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0119 | FbpA_PF05833 | 29 | 0.019 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0123 | LUXSPROTEIN | 224 | 2e-78 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| 4 | HPSA20_0207 | HPSA20_0225 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0207 | 0 | 11 | 3.078321 | hypothetical protein | |
| HPSA20_0208 | -1 | 10 | 2.766837 | hypothetical protein | |
| HPSA20_0209 | -1 | 9 | 2.213976 | hypothetical protein | |
| HPSA20_0210 | -2 | 8 | 2.335974 | phospholipase D family protein | |
| HPSA20_0211 | -1 | 10 | 3.434444 | succinate dehydrogenase and fumarate reductase | |
| HPSA20_0212 | -1 | 11 | 3.262263 | succinate dehydrogenase/fumarate reductase, | |
| HPSA20_0213 | -2 | 14 | 1.856896 | succinate dehydrogenase/Fumarate reductase | |
| HPSA20_0214 | -2 | 15 | 1.925352 | triosephosphate isomerase family protein | |
| HPSA20_0215 | -2 | 16 | 3.200230 | short chain dehydrogenase family protein | |
| HPSA20_0216 | -2 | 17 | 3.576244 | UDP-3-O-[3-hydroxymyristoyl] glucosamine | |
| HPSA20_0217 | -2 | 19 | 3.911624 | methionine adenosyltransferase | |
| HPSA20_0218 | -1 | 21 | 3.566359 | nucleoside diphosphate kinase family protein | |
| HPSA20_0219 | -2 | 21 | 2.963688 | hypothetical protein | |
| HPSA20_0220 | -1 | 15 | -2.767082 | ribosomal protein L32 | |
| HPSA20_0221 | -1 | 13 | -1.746663 | fatty acid/phospholipid synthesis protein PlsX | |
| HPSA20_0222 | -1 | 12 | -2.928214 | 3-oxoacyl-[acyl-carrier-] synthase III family | |
| HPSA20_0223 | 0 | 12 | -3.898895 | hypothetical protein | |
| HPSA20_0224 | 0 | 11 | -3.381061 | hypothetical protein | |
| HPSA20_0225 | -1 | 9 | -3.079322 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0215 | DHBDHDRGNASE | 57 | 1e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 5 | HPSA20_0239 | HPSA20_0249 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0239 | 2 | 11 | 2.022370 | hypothetical protein | |
| HPSA20_0240 | 1 | 10 | 2.353583 | beta-1,4-N-acetylgalactosaminyltransferase | |
| HPSA20_0241 | -1 | 12 | 3.315173 | phosphatidylethanolamine-binding family protein | |
| HPSA20_0242 | -1 | 14 | 3.106813 | hypothetical protein | |
| HPSA20_0243 | -1 | 13 | 3.204850 | cysteine desulfurase, NifS family | |
| HPSA20_0244 | -1 | 12 | 2.451237 | BFD-like [2Fe-2S] binding domain protein | |
| HPSA20_0245 | 0 | 12 | 2.492238 | ribbon-helix-helix , copG family protein | |
| HPSA20_0246 | 0 | 12 | 2.243048 | DNA repair protein RadA | |
| HPSA20_0247 | 2 | 14 | 1.968084 | peptide-methionine (S)-S-oxide reductase | |
| HPSA20_0248 | 2 | 18 | 2.035390 | sulfite exporter TauE/SafE family protein | |
| HPSA20_0249 | 2 | 19 | 1.416011 | outer membrane family protein |
| 6 | HPSA20_0330 | HPSA20_0353 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0330 | 1 | 17 | 3.127643 | ribosomal protein L21 | |
| HPSA20_0331 | 1 | 17 | 3.316363 | ribosomal protein L27 | |
| HPSA20_0332 | 1 | 16 | 3.124117 | bacterial extracellular solute-binding s, 5 | |
| HPSA20_0333 | 0 | 18 | 4.168031 | binding--dependent transport system inner | |
| HPSA20_0334 | -1 | 16 | 3.672548 | binding--dependent transport system inner | |
| HPSA20_0335 | -2 | 15 | 2.771722 | ABC transporter family protein | |
| HPSA20_0336 | -2 | 14 | 3.124837 | oligopeptide/dipeptide ABC transporter, | |
| HPSA20_0337 | -2 | 13 | 2.865867 | ABC transporter family protein | |
| HPSA20_0338 | -2 | 14 | 2.416605 | obg family GTPase CgtA | |
| HPSA20_0339 | -2 | 14 | 1.903088 | alginate lyase family protein | |
| HPSA20_0340 | -1 | 15 | 2.441952 | yceI-like domain protein | |
| HPSA20_0341 | 0 | 15 | 2.787824 | glutamate-1-semialdehyde-2,1-aminomutase | |
| HPSA20_0342 | 3 | 15 | 1.791161 | F0F1-ATPase subunit family protein | |
| HPSA20_0343 | 3 | 14 | 1.652212 | putative membrane protein | |
| HPSA20_0344 | 2 | 14 | 1.779768 | carbon-nitrogen hydrolase family protein | |
| HPSA20_0345 | 3 | 15 | 1.960833 | polysaccharide deacetylase family protein | |
| HPSA20_0346 | 2 | 15 | 0.540316 | hypothetical protein | |
| HPSA20_0347 | 3 | 15 | 0.248150 | cobW/HypB/UreG, nucleotide-binding domain | |
| HPSA20_0348 | 0 | 13 | -0.345730 | major Facilitator Superfamily protein | |
| HPSA20_0349 | -1 | 16 | -0.633465 | hypothetical protein | |
| HPSA20_0350 | -1 | 14 | -0.484317 | hypothetical protein | |
| HPSA20_0351 | 1 | 15 | -0.574959 | hypothetical protein | |
| HPSA20_0352 | 1 | 15 | -0.719299 | heme oxygenase, HugZ family | |
| HPSA20_0353 | 2 | 14 | -1.034034 | arginine--tRNA ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0348 | TCRTETB | 30 | 0.020 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 7 | HPSA20_0423 | HPSA20_0436 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0423 | 1 | 17 | -3.295080 | response regulator | |
| HPSA20_0424 | 0 | 14 | -3.089148 | hypothetical protein | |
| HPSA20_0425 | -1 | 15 | -2.617830 | outer membrane family protein | |
| HPSA20_0427 | -1 | 14 | -1.925174 | *hypothetical protein | |
| HPSA20_0428 | -2 | 14 | -1.409164 | prokaryotic metallothionein family protein | |
| HPSA20_0429 | -1 | 11 | -0.428119 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |
| HPSA20_0430 | -1 | 13 | 0.673380 | tRNA ribosyltransferase-isomerase | |
| HPSA20_0431 | 0 | 14 | 0.538069 | queuosine biosynthesis family protein | |
| HPSA20_0432 | 1 | 15 | -0.128114 | twin arginine-targeting protein translocase | |
| HPSA20_0433 | 2 | 13 | -0.419684 | twin arginine-targeting protein translocase | |
| HPSA20_0434 | 3 | 13 | -0.935268 | holliday junction DNA helicase RuvB | |
| HPSA20_0435 | 4 | 16 | -1.962431 | 3-methyl-2-oxobutanoate | |
| HPSA20_0436 | 4 | 17 | -2.905659 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0423 | HTHFIS | 76 | 2e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0433 | TATBPROTEIN | 121 | 6e-38 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| 8 | HPSA20_0477 | HPSA20_0492 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0477 | 2 | 17 | 1.502410 | amino acid permease family protein | |
| HPSA20_0478 | 1 | 12 | 0.801393 | hypothetical protein | |
| HPSA20_0479 | 0 | 12 | 1.051326 | CDP-diacylglycerol--glycerol-3-phosphate | |
| HPSA20_0480 | -1 | 12 | 1.094604 | putative membrane protein | |
| HPSA20_0481 | -3 | 12 | -0.016640 | short chain dehydrogenase family protein | |
| HPSA20_0482 | -2 | 13 | -0.948996 | dihydrodipicolinate synthase | |
| HPSA20_0483 | -2 | 14 | -2.248642 | peptidase M16 inactive domain protein | |
| HPSA20_0484 | -2 | 16 | -2.747079 | dihydroorotate oxidase | |
| HPSA20_0485 | -3 | 17 | -3.027420 | polyphosphate kinase 1 | |
| HPSA20_0487 | 0 | 18 | -3.928165 | *type I restriction modification DNA specificity | |
| HPSA20_0488 | -1 | 16 | -3.525280 | eco57I restriction-modification methylase family | |
| HPSA20_0489 | -1 | 16 | -3.709727 | type III restriction enzyme, res subunit | |
| HPSA20_0490 | 2 | 16 | -3.086944 | type III restriction enzyme, res subunit | |
| HPSA20_0491 | 1 | 16 | -3.096417 | type I restriction enzyme R domain protein | |
| HPSA20_0492 | 1 | 15 | -3.083466 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0481 | DHBDHDRGNASE | 100 | 2e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 9 | HPSA20_0501 | HPSA20_0520 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0501 | 2 | 17 | -2.101012 | hypothetical protein | |
| HPSA20_0502 | 3 | 17 | -3.250484 | molybdate ABC transporter, periplasmic | |
| HPSA20_0503 | -1 | 13 | -1.192545 | binding--dependent transport system inner | |
| HPSA20_0504 | -1 | 13 | -1.710753 | hypothetical protein | |
| HPSA20_0505 | 0 | 13 | -2.017917 | ABC transporter family protein | |
| HPSA20_0506 | 0 | 15 | -2.043377 | glutamate--tRNA ligase | |
| HPSA20_0507 | 0 | 17 | -2.467060 | glycosyltransferase 9 family protein | |
| HPSA20_0508 | 0 | 17 | -1.488217 | GTP-binding protein TypA/BipA | |
| HPSA20_0509 | 3 | 23 | -4.091038 | D12 class N6 adenine-specific DNA | |
| HPSA20_0510 | 2 | 24 | -4.057782 | hypothetical protein | |
| HPSA20_0511 | 2 | 23 | -4.076019 | major Facilitator Superfamily protein | |
| HPSA20_0512 | 0 | 18 | -3.784560 | hypothetical protein | |
| HPSA20_0513 | 4 | 18 | -0.201890 | DNA (cytosine-5-)-methyltransferase family | |
| HPSA20_0514 | 8 | 21 | 0.426483 | hypothetical protein | |
| HPSA20_0515 | 4 | 20 | 0.556970 | hypothetical protein | |
| HPSA20_0516 | 3 | 19 | 0.344257 | C-5 cytosine-specific DNA methylase family | |
| HPSA20_0517 | 3 | 18 | 0.057718 | catalase family protein | |
| HPSA20_0518 | 2 | 16 | 0.278880 | outer membrane family protein | |
| HPSA20_0519 | 2 | 14 | -0.951887 | outer membrane family protein | |
| HPSA20_0520 | 4 | 15 | -1.636336 | tetrahydrofolate dehydrogenase/cyclohydrolase, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0505 | PF05272 | 30 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0508 | TCRTETOQM | 198 | 1e-57 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0511 | TCRTETA | 30 | 0.018 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 10 | HPSA20_0535 | HPSA20_0547 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0535 | 1 | 15 | -4.132786 | eco57I restriction-modification methylase family | |
| HPSA20_0536 | 0 | 15 | -3.141727 | R.Pab1 restriction endonuclease family protein | |
| HPSA20_0537 | 0 | 10 | -1.005050 | hypothetical protein | |
| HPSA20_0538 | 0 | 9 | -0.224597 | hypothetical protein | |
| HPSA20_0539 | 0 | 10 | -0.028948 | peptidase M23 family protein | |
| HPSA20_0540 | 2 | 12 | -0.056641 | nudix-type nucleoside diphosphatase, YffH/AdpP | |
| HPSA20_0541 | 2 | 11 | 0.271383 | hypothetical protein | |
| HPSA20_0542 | 0 | 14 | 0.987800 | glycolate oxidase, subunit GlcD | |
| HPSA20_0543 | 2 | 20 | 0.349620 | dihydrodipicolinate reductase | |
| HPSA20_0544 | 7 | 23 | -1.182182 | putative lipoprotein | |
| HPSA20_0545 | 8 | 21 | -2.008487 | hypothetical protein | |
| HPSA20_0546 | 3 | 18 | -1.867026 | hypothetical protein | |
| HPSA20_0547 | 3 | 17 | -1.833474 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0541 | IGASERPTASE | 46 | 3e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 11 | HPSA20_0607 | HPSA20_0619 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0607 | -1 | 17 | -3.556100 | pyruvate ferredoxin/flavodoxin oxidoreductase | |
| HPSA20_0608 | 0 | 19 | -4.688285 | HAD hydrolase, IA, variant 1 family protein | |
| HPSA20_0609 | -1 | 13 | -2.610753 | hypothetical protein | |
| HPSA20_0610 | -1 | 12 | -0.243215 | hypothetical protein | |
| HPSA20_0611 | -1 | 11 | -0.363976 | disulfide bond formation DsbB family protein | |
| HPSA20_0612 | -2 | 12 | -0.448745 | hypothetical protein | |
| HPSA20_0613 | -2 | 12 | -0.815882 | hypothetical protein | |
| HPSA20_0614 | -2 | 11 | -0.667091 | putative lipoprotein | |
| HPSA20_0615 | -2 | 13 | -1.548062 | penicillin-binding , 1A family protein | |
| HPSA20_0616 | 0 | 17 | -3.279788 | aminotransferase class I and II family protein | |
| HPSA20_0617 | 2 | 19 | -4.017789 | methyl-accepting chemotaxis (MCP) signaling | |
| HPSA20_0618 | 6 | 22 | -1.247638 | hypothetical protein | |
| HPSA20_0619 | 4 | 19 | -1.289139 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0609 | CHANNELTSX | 28 | 0.027 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| 12 | HPSA20_0702 | HPSA20_0735 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0702 | 0 | 16 | -3.565285 | hypothetical protein | |
| HPSA20_0703 | 0 | 16 | -1.153668 | hypothetical protein | |
| HPSA20_0704 | -1 | 10 | -0.318461 | phage integrase family protein | |
| HPSA20_0705 | -1 | 10 | -0.220588 | methylated-DNA-[]-cysteine S-methyltransferase | |
| HPSA20_0706 | 1 | 9 | 0.793061 | sulfite exporter TauE/SafE family protein | |
| HPSA20_0707 | -1 | 11 | 1.309000 | sulfite exporter TauE/SafE family protein | |
| HPSA20_0708 | -1 | 10 | 1.080241 | oxidoreductase , NAD-binding Rossmann fold | |
| HPSA20_0709 | 2 | 11 | 1.153455 | ribonucleoside-diphosphate reductase, alpha | |
| HPSA20_0710 | 5 | 14 | 0.958270 | hypothetical protein | |
| HPSA20_0711 | 2 | 12 | 0.548846 | hypothetical protein | |
| HPSA20_0712 | 1 | 12 | -0.227434 | UDP-N-acetylglucosamine | |
| HPSA20_0713 | 2 | 14 | -1.888696 | flagellar biosynthetic protein FliP | |
| HPSA20_0714 | 3 | 15 | -3.004614 | tonB-dependent Receptor Plug domain protein | |
| HPSA20_0715 | 0 | 18 | -4.654284 | hypothetical protein | |
| HPSA20_0716 | -1 | 15 | -2.104995 | ferrous iron transport protein B | |
| HPSA20_0717 | 1 | 16 | -2.289392 | putative 3'-5' exonuclease | |
| HPSA20_0718 | 2 | 16 | -1.307166 | D12 class N6 adenine-specific DNA | |
| HPSA20_0719 | 1 | 15 | 0.750670 | cfrBI restriction endonuclease family protein | |
| HPSA20_0720 | 2 | 15 | 3.798034 | putative 3'-5' exonuclease | |
| HPSA20_0721 | 3 | 14 | 3.871991 | acetyl-CoA C-acetyltransferase family protein | |
| HPSA20_0722 | 2 | 14 | 3.392692 | 3-oxoacid CoA-transferase, A subunit | |
| HPSA20_0723 | 4 | 15 | 3.564287 | 3-oxoacid CoA-transferase, B subunit | |
| HPSA20_0724 | 4 | 16 | 3.271680 | short chain fatty acid transporter family | |
| HPSA20_0725 | 3 | 15 | 2.567698 | C4-dicarboxylate anaerobic carrier family | |
| HPSA20_0726 | 3 | 14 | 1.993072 | hypothetical protein | |
| HPSA20_0727 | 3 | 12 | 1.895041 | hydantoinase/oxoprolinase family protein | |
| HPSA20_0728 | 1 | 10 | 1.008535 | hydantoinase B/oxoprolinase family protein | |
| HPSA20_0729 | -1 | 9 | -0.109917 | acetone carboxylase gamma subunit | |
| HPSA20_0730 | 0 | 10 | -0.457976 | hypothetical protein | |
| HPSA20_0731 | -1 | 10 | 0.386958 | prokaryotic diacylglycerol kinase family | |
| HPSA20_0732 | 0 | 10 | -0.097191 | DNA gyrase, A subunit | |
| HPSA20_0733 | -2 | 14 | -1.948653 | hypothetical protein | |
| HPSA20_0734 | -1 | 12 | -0.361757 | AAA domain family protein | |
| HPSA20_0735 | 2 | 17 | -0.004771 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0711 | PF07132 | 29 | 0.005 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0713 | FLGBIOSNFLIP | 277 | 6e-97 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0734 | HTHFIS | 396 | e-138 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 13 | HPSA20_0749 | HPSA20_0769 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0749 | 3 | 12 | -0.643666 | RNA polymerase sigma-54 factor | |
| HPSA20_0750 | 1 | 13 | 0.204562 | ABC transporter family protein | |
| HPSA20_0751 | 1 | 13 | -0.429562 | hypothetical protein | |
| HPSA20_0752 | 0 | 12 | 0.864333 | DNA polymerase III, subunit gamma and tau | |
| HPSA20_0753 | 2 | 13 | 3.064277 | lysE type translocator family protein | |
| HPSA20_0754 | 2 | 12 | 3.024606 | hypothetical protein | |
| HPSA20_0755 | 3 | 14 | 2.651790 | hypothetical protein | |
| HPSA20_0756 | 2 | 12 | 2.757026 | hypothetical protein | |
| HPSA20_0757 | 1 | 12 | 2.887960 | L-asparaginase, type II family protein | |
| HPSA20_0758 | 1 | 12 | 1.972814 | transporter, anaerobic C4-dicarboxylate uptake | |
| HPSA20_0759 | 2 | 12 | -0.378521 | outer membrane family protein | |
| HPSA20_0760 | 2 | 14 | -2.312068 | hypothetical protein | |
| HPSA20_0761 | 2 | 13 | -2.133895 | outer membrane family protein | |
| HPSA20_0762 | 0 | 13 | -3.263733 | dihydrouridine synthase family protein | |
| HPSA20_0763 | 1 | 15 | -4.657733 | hypothetical protein | |
| HPSA20_0764 | 1 | 15 | -4.358087 | tRNA(Ile)-lysidine synthetase | |
| HPSA20_0765 | 1 | 17 | -4.172433 | hypothetical protein | |
| HPSA20_0766 | 3 | 20 | -4.618513 | hypothetical protein | |
| HPSA20_0767 | 3 | 21 | -5.150436 | hypothetical protein | |
| HPSA20_0768 | 2 | 13 | -3.454127 | hypothetical protein | |
| HPSA20_0769 | 2 | 12 | -3.162509 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0752 | IGASERPTASE | 33 | 0.004 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0754 | SECA | 26 | 0.047 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 14 | HPSA20_0838 | HPSA20_0850 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0838 | 2 | 11 | -0.409361 | AAA domain family protein | |
| HPSA20_0839 | 1 | 13 | -0.765241 | peptide deformylase | |
| HPSA20_0840 | 1 | 14 | -0.640558 | ATP-dependent Clp protease, proteolytic subunit | |
| HPSA20_0841 | 1 | 13 | -0.981476 | trigger factor | |
| HPSA20_0842 | -2 | 15 | -0.546099 | outer membrane family protein | |
| HPSA20_0843 | -1 | 15 | 0.062514 | neuraminyllactose-binding hemagglutinin family | |
| HPSA20_0844 | -2 | 15 | 0.797957 | molybdenum cofactor biosynthesis protein C | |
| HPSA20_0845 | -1 | 17 | 1.160978 | molybdenum cofactor synthesis domain protein | |
| HPSA20_0846 | 2 | 19 | 0.027959 | moaE family protein | |
| HPSA20_0847 | 3 | 20 | 0.005880 | thiS family protein | |
| HPSA20_0848 | 2 | 18 | -0.435138 | GTP cyclohydrolase II | |
| HPSA20_0849 | 2 | 16 | -1.261349 | hypothetical protein | |
| HPSA20_0850 | 2 | 11 | 0.424686 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0843 | PF05211 | 402 | e-145 | Neuraminyllactose-binding hemagglutinin | |
>PF05211#Neuraminyllactose-binding hemagglutinin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0848 | ENTEROVIROMP | 29 | 0.005 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| 15 | HPSA20_0918 | HPSA20_0924 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0918 | 1 | 16 | 3.490367 | hydrogenase nickel insertion protein HypA | |
| HPSA20_0919 | 0 | 13 | 3.530563 | flagellar hook protein FlgE | |
| HPSA20_0920 | 2 | 20 | 1.905376 | CDP-diacylglycerol pyrophosphatase | |
| HPSA20_0921 | 1 | 15 | 2.919973 | hypothetical protein | |
| HPSA20_0922 | 1 | 14 | 3.219957 | phnA family protein | |
| HPSA20_0923 | 1 | 14 | 3.018949 | hypothetical protein | |
| HPSA20_0924 | 1 | 12 | 3.040887 | tat (twin-arginine translocation) pathway signal |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0919 | FLGHOOKAP1 | 42 | 7e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 16 | HPSA20_1012 | HPSA20_1024 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1012 | 2 | 18 | -1.023917 | nitroreductase family protein | |
| HPSA20_1013 | 3 | 20 | -1.423690 | nitroreductase family protein | |
| HPSA20_1014 | 1 | 17 | -1.800106 | prolipoprotein diacylglyceryl transferase | |
| HPSA20_1015 | 2 | 17 | -1.859889 | RNA pseudouridylate synthase family protein | |
| HPSA20_1016 | 0 | 15 | -0.542714 | hypothetical protein | |
| HPSA20_1017 | 0 | 14 | 0.737052 | 3-Deoxy-D-manno-octulosonic-acid transferase | |
| HPSA20_1018 | 0 | 14 | 0.056922 | putative membrane protein | |
| HPSA20_1019 | 0 | 10 | 0.130680 | putative zinc ribbon domain protein | |
| HPSA20_1020 | 1 | 10 | 0.155646 | NIF3 family protein | |
| HPSA20_1021 | 2 | 10 | -0.444599 | glycine--tRNA ligase, alpha subunit | |
| HPSA20_1022 | 4 | 11 | -1.005269 | NAD-dependent glycerol-3-phosphate dehydrogenase | |
| HPSA20_1023 | 4 | 11 | -1.932345 | hypothetical protein | |
| HPSA20_1024 | 5 | 12 | -1.804986 | GTPase of unknown function family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1019 | CHANLCOLICIN | 30 | 0.011 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 17 | HPSA20_1039 | HPSA20_1054 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1039 | 2 | 17 | 0.602340 | hypothetical protein | |
| HPSA20_1040 | 3 | 15 | 0.386484 | cell division protein FtsA | |
| HPSA20_1041 | 5 | 18 | -0.641056 | cell division protein FtsZ | |
| HPSA20_1042 | 3 | 18 | -3.852227 | hypothetical protein | |
| HPSA20_1043 | 1 | 16 | -3.313419 | hypothetical protein | |
| HPSA20_1044 | 2 | 15 | -3.146159 | hypothetical protein | |
| HPSA20_1045 | 1 | 15 | -3.258622 | hypothetical protein | |
| HPSA20_1046 | 3 | 20 | -4.460250 | hypothetical protein | |
| HPSA20_1047 | 2 | 21 | -3.273464 | hypothetical protein | |
| HPSA20_1048 | 1 | 20 | -2.831773 | mechanosensitive ion channel family protein | |
| HPSA20_1049 | 2 | 20 | -3.290687 | hypothetical protein | |
| HPSA20_1050 | 1 | 19 | -3.142966 | hypothetical protein | |
| HPSA20_1051 | 2 | 21 | -2.051143 | putative membrane protein | |
| HPSA20_1054 | 3 | 21 | -0.946204 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1040 | SHAPEPROTEIN | 42 | 4e-06 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 18 | HPSA20_1103 | HPSA20_1160 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1103 | 0 | 16 | -3.341276 | peptidase M48 family protein | |
| HPSA20_1104 | 1 | 20 | -4.914551 | methyltransferase, HemK family protein | |
| HPSA20_1105 | 3 | 20 | -4.066345 | glu/Leu/Phe/Val dehydrogenase, dimerization | |
| HPSA20_1106 | 4 | 26 | -6.988364 | phage integrase family protein | |
| HPSA20_1107 | 4 | 26 | -6.857906 | trbL/VirB6 plasmid conjugal transfer family | |
| HPSA20_1108 | 4 | 18 | -4.706315 | putative membrane protein | |
| HPSA20_1109 | 5 | 17 | -4.201647 | hypothetical protein | |
| HPSA20_1110 | 4 | 16 | -3.904888 | hypothetical protein | |
| HPSA20_1111 | 5 | 16 | -4.605461 | hypothetical protein | |
| HPSA20_1112 | 4 | 15 | -4.071795 | hypothetical protein | |
| HPSA20_1113 | 5 | 15 | -3.791947 | eco57I restriction-modification methylase family | |
| HPSA20_1114 | 6 | 17 | -5.768516 | virC1 family protein | |
| HPSA20_1115 | 8 | 16 | -6.609644 | hypothetical protein | |
| HPSA20_1116 | 6 | 18 | -6.279591 | putative lipoprotein | |
| HPSA20_1117 | 5 | 22 | -7.291796 | hypothetical protein | |
| HPSA20_1118 | 5 | 23 | -7.118499 | relaxase/mobilization nuclease domain protein | |
| HPSA20_1119 | 3 | 25 | -7.416309 | hypothetical protein | |
| HPSA20_1120 | 4 | 26 | -7.576450 | addiction module toxin, RelE/StbE family | |
| HPSA20_1121 | 5 | 27 | -8.017114 | type IV secretory system Conjugative DNA | |
| HPSA20_1122 | 5 | 30 | -9.816689 | putative membrane protein | |
| HPSA20_1123 | 6 | 30 | -8.821785 | hypothetical protein | |
| HPSA20_1124 | 3 | 27 | -7.002742 | hypothetical protein | |
| HPSA20_1125 | 5 | 20 | -5.965916 | type II/IV secretion system family protein | |
| HPSA20_1126 | 5 | 19 | -5.836002 | hypothetical protein | |
| HPSA20_1127 | 5 | 19 | -5.517600 | hypothetical protein | |
| HPSA20_1128 | 5 | 20 | -5.660306 | hypothetical protein | |
| HPSA20_1129 | 5 | 21 | -6.013100 | bacterial conjugation TrbI-like family protein | |
| HPSA20_1130 | 7 | 23 | -7.123478 | conjugal transfer family protein | |
| HPSA20_1131 | 7 | 28 | -8.210211 | virB8 family protein | |
| HPSA20_1132 | 7 | 28 | -8.221381 | putative lipoprotein | |
| HPSA20_1133 | 7 | 28 | -8.576925 | hypothetical protein | |
| HPSA20_1134 | 7 | 27 | -8.436755 | DNA topoisomerase family protein | |
| HPSA20_1135 | 7 | 27 | -8.736614 | ftsK/SpoIIIE family protein | |
| HPSA20_1136 | 7 | 28 | -8.399912 | hypothetical protein | |
| HPSA20_1137 | 1 | 12 | -3.736581 | trbC/VIRB2 family protein | |
| HPSA20_1138 | 0 | 11 | -3.736793 | hypothetical protein | |
| HPSA20_1139 | -2 | 12 | -1.358648 | hypothetical protein | |
| HPSA20_1140 | -2 | 13 | -1.138138 | hypothetical protein | |
| HPSA20_1141 | -1 | 12 | -0.435021 | hypothetical protein | |
| HPSA20_1142 | -2 | 14 | -0.525606 | resB-like family protein | |
| HPSA20_1143 | -1 | 17 | -0.179326 | putative lipoprotein | |
| HPSA20_1144 | 1 | 15 | 0.465270 | ferrochelatase | |
| HPSA20_1145 | 1 | 16 | 1.098167 | putative membrane protein | |
| HPSA20_1146 | 2 | 15 | 1.849123 | RNA methyltransferase, RsmE family protein | |
| HPSA20_1147 | 0 | 11 | 2.886514 | outer membrane family protein | |
| HPSA20_1148 | -1 | 12 | 1.715488 | hypothetical protein | |
| HPSA20_1149 | -1 | 12 | -0.060433 | hypothetical protein | |
| HPSA20_1150 | 1 | 11 | -0.462803 | deoxycytidine triphosphate deaminase | |
| HPSA20_1151 | 1 | 11 | -0.698639 | acetyl-CoA carboxylase, biotin carboxyl carrier | |
| HPSA20_1152 | 2 | 10 | -0.990582 | acetyl-CoA carboxylase, biotin carboxylase | |
| HPSA20_1153 | 1 | 10 | -2.009188 | hypothetical protein | |
| HPSA20_1154 | 2 | 11 | -1.480707 | hypothetical protein | |
| HPSA20_1155 | 2 | 11 | -0.575870 | hypothetical protein | |
| HPSA20_1156 | 3 | 10 | -0.361062 | UDP-4-keto-6-deoxy-N-acetylglucosamine | |
| HPSA20_1158 | 4 | 13 | 0.412607 | *ribonucleotide reductase, small chain family | |
| HPSA20_1159 | 3 | 13 | 0.182769 | protein-L-isoaspartate O-methyltransferase | |
| HPSA20_1160 | 2 | 13 | -0.751301 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1110 | cloacin | 35 | 8e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1113 | FbpA_PF05833 | 33 | 0.017 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1131 | PF04335 | 99 | 1e-26 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| 19 | HPSA20_1174 | HPSA20_1204 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1174 | 2 | 10 | 0.224195 | glucose-6-phosphate dehydrogenase, NAD binding | |
| HPSA20_1175 | 3 | 11 | 0.902668 | 6-phosphogluconolactonase | |
| HPSA20_1176 | 5 | 12 | 0.820013 | glucokinase | |
| HPSA20_1177 | 6 | 15 | -0.363490 | zinc-binding dehydrogenase family protein | |
| HPSA20_1178 | 4 | 14 | -0.938846 | glycosyl transferase 8 family protein | |
| HPSA20_1179 | 5 | 16 | 1.057886 | hypothetical protein | |
| HPSA20_1180 | 1 | 15 | 3.048476 | outer membrane family protein | |
| HPSA20_1181 | 1 | 15 | 3.623815 | hypothetical protein | |
| HPSA20_1182 | 0 | 14 | 3.631342 | acceptor oxidoreductase, gamma subunit, | |
| HPSA20_1183 | 0 | 12 | 2.698640 | pyruvate ferredoxin/flavodoxin oxidoreductase | |
| HPSA20_1184 | -1 | 10 | 2.329510 | acceptor oxidoreductase, delta subunit, | |
| HPSA20_1185 | -2 | 8 | 1.659006 | hypothetical protein | |
| HPSA20_1186 | -2 | 11 | 0.388756 | thiamine pyrophosphate enzyme, C-terminal TPP | |
| HPSA20_1187 | 1 | 11 | -0.708035 | adenylosuccinate lyase | |
| HPSA20_1188 | 3 | 14 | -1.448928 | outer membrane family protein | |
| HPSA20_1189 | 4 | 16 | -1.259591 | excinuclease ABC subunit B | |
| HPSA20_1190 | 1 | 15 | -0.364057 | hypothetical protein | |
| HPSA20_1191 | 0 | 11 | -0.054591 | hypothetical protein | |
| HPSA20_1192 | 1 | 11 | 0.111069 | tetrahydrofolate dehydrogenase/cyclohydrolase, | |
| HPSA20_1193 | 1 | 12 | -0.641462 | hypothetical protein | |
| HPSA20_1194 | 1 | 13 | -1.137885 | sel1 repeat family protein | |
| HPSA20_1195 | 0 | 12 | -1.107019 | gamma-glutamyltransferase | |
| HPSA20_1196 | 1 | 12 | -3.646021 | flagellar hook-associated protein FlgK | |
| HPSA20_1197 | 3 | 19 | -4.150939 | hypothetical protein | |
| HPSA20_1198 | 1 | 19 | -3.803905 | R.HinP1I restriction endonuclease family | |
| HPSA20_1199 | 2 | 18 | -1.647662 | DNA (cytosine-5-)-methyltransferase family | |
| HPSA20_1200 | 3 | 13 | -1.045258 | anti-sigma-28 factor, FlgM family protein | |
| HPSA20_1201 | 4 | 12 | -1.927466 | hypothetical protein | |
| HPSA20_1202 | 5 | 12 | -1.791226 | FKBP-type peptidyl-prolyl cis-trans isomerase | |
| HPSA20_1203 | 5 | 14 | -2.762169 | hypothetical protein | |
| HPSA20_1204 | 4 | 14 | -1.999771 | ompA family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1187 | TYPE3IMRPROT | 29 | 0.027 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1195 | NAFLGMOTY | 31 | 0.012 | Sodium-type flagellar protein MotY precursor signature. | |
>NAFLGMOTY#Sodium-type flagellar protein MotY precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1196 | FLGHOOKAP1 | 565 | 0.0 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1203 | IGASERPTASE | 32 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1204 | OMPADOMAIN | 141 | 1e-43 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 20 | HPSA20_1216 | HPSA20_1222 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1216 | 0 | 18 | -3.830528 | parB-like partition s domain protein | |
| HPSA20_1217 | 1 | 18 | -3.410753 | cobQ/CobB/MinD/ParA nucleotide binding domain | |
| HPSA20_1218 | 1 | 19 | -4.204468 | biotin--[acetyl-CoA-carboxylase] ligase | |
| HPSA20_1219 | 1 | 18 | -4.004763 | methionyl-tRNA formyltransferase | |
| HPSA20_1220 | 3 | 19 | -4.392174 | hypothetical protein | |
| HPSA20_1221 | 3 | 17 | -4.205354 | hypothetical protein | |
| HPSA20_1222 | 3 | 16 | 0.442034 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1219 | FERRIBNDNGPP | 34 | 7e-04 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1222 | GPOSANCHOR | 38 | 8e-05 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 21 | HPSA20_1330 | HPSA20_1350 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1330 | 2 | 20 | 2.600217 | hypothetical protein | |
| HPSA20_1331 | 5 | 22 | 3.734538 | carbamoyl-phosphate synthase small chain, CPSase | |
| HPSA20_1332 | 9 | 23 | 3.336458 | hypothetical protein | |
| HPSA20_1333 | 5 | 18 | 2.971488 | peptidase C26 family protein | |
| HPSA20_1334 | -1 | 11 | 3.042841 | carbon-nitrogen hydrolase family protein | |
| HPSA20_1335 | 0 | 11 | 1.882000 | putative membrane protein | |
| HPSA20_1336 | 1 | 13 | 1.513371 | hypothetical protein | |
| HPSA20_1337 | 3 | 16 | 0.781294 | hypothetical protein | |
| HPSA20_1338 | 1 | 13 | 1.573468 | septum formation protein Maf | |
| HPSA20_1339 | 1 | 12 | 1.832341 | alanine--tRNA ligase | |
| HPSA20_1340 | 4 | 20 | -0.440942 | hypothetical protein | |
| HPSA20_1341 | 3 | 19 | 0.240277 | hypothetical protein | |
| HPSA20_1342 | 3 | 18 | 1.581721 | hypothetical protein | |
| HPSA20_1343 | 4 | 17 | 2.275507 | outer membrane family protein | |
| HPSA20_1344 | 3 | 21 | 0.860511 | hypothetical protein | |
| HPSA20_1345 | 0 | 18 | -1.215954 | hypothetical protein | |
| HPSA20_1346 | 1 | 12 | -0.901292 | ribosomal protein S18 | |
| HPSA20_1347 | 2 | 11 | -0.874300 | single-stranded DNA-binding family protein | |
| HPSA20_1348 | 3 | 11 | -1.380960 | ribosomal protein S6 | |
| HPSA20_1349 | 4 | 11 | -0.894132 | hypothetical protein | |
| HPSA20_1350 | 2 | 9 | -0.428097 | DNA polymerase III, delta subunit |
| 22 | HPSA20_1437 | HPSA20_1459 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1437 | 2 | 12 | -0.544605 | branched-chain amino acid transport family | |
| HPSA20_1438 | 2 | 11 | -0.359646 | azaleucine resistance protein AzlC | |
| HPSA20_1439 | 1 | 12 | -0.351651 | chaperone protein DnaJ | |
| HPSA20_1440 | 0 | 12 | -0.663789 | hypothetical protein | |
| HPSA20_1441 | -1 | 12 | -0.194087 | tRNA | |
| HPSA20_1442 | -1 | 15 | 0.140569 | dnaJ domain protein | |
| HPSA20_1443 | 1 | 16 | 2.220042 | nicotinate (nicotinamide) nucleotide | |
| HPSA20_1444 | 2 | 17 | 1.994600 | ribbon-helix-helix , copG family protein | |
| HPSA20_1445 | 0 | 16 | 1.510979 | tonB-system energizer ExbB | |
| HPSA20_1446 | 0 | 16 | 1.436710 | tonB system transport protein ExbD | |
| HPSA20_1447 | 0 | 17 | 1.427708 | tonB family C-terminal domain protein | |
| HPSA20_1448 | 0 | 18 | 2.463874 | outer membrane family protein | |
| HPSA20_1449 | -1 | 26 | -0.954067 | hypothetical protein | |
| HPSA20_1450 | 0 | 25 | -0.889935 | D12 class N6 adenine-specific DNA | |
| HPSA20_1451 | 1 | 36 | -5.121041 | putative membrane protein | |
| HPSA20_1452 | 2 | 35 | -4.410090 | hypothetical protein | |
| HPSA20_1453 | 3 | 34 | -4.209266 | serine O-acetyltransferase | |
| HPSA20_1454 | 7 | 34 | -7.149465 | hypothetical protein | |
| HPSA20_1455 | 4 | 26 | -6.387218 | hypothetical protein | |
| HPSA20_1456 | 3 | 23 | -5.899163 | hypothetical protein | |
| HPSA20_1459 | 2 | 20 | -1.860516 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1440 | cloacin | 30 | 0.014 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1443 | LPSBIOSNTHSS | 53 | 3e-11 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1447 | TONBPROTEIN | 90 | 9e-24 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 23 | HPSA20_1507 | HPSA20_1514 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1507 | 2 | 17 | 1.764450 | hypothetical protein | |
| HPSA20_1508 | 2 | 16 | 1.758708 | tRNA modification GTPase TrmE | |
| HPSA20_1509 | 4 | 17 | 1.873737 | tRNA modification GTPase TrmE | |
| HPSA20_1510 | 6 | 18 | 2.128369 | outer membrane family protein | |
| HPSA20_1511 | 3 | 16 | 0.242580 | hypothetical protein | |
| HPSA20_1512 | 4 | 18 | -1.813207 | outer membrane family protein | |
| HPSA20_1513 | 2 | 20 | -1.429319 | putative membrane protein | |
| HPSA20_1514 | 3 | 17 | -0.405838 | alwI restriction endonuclease family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1509 | TCRTETOQM | 35 | 2e-04 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 24 | HPSA20_1574 | HPSA20_1633 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1574 | 2 | 16 | 2.722580 | cytochrome c oxidase accessory protein CcoG | |
| HPSA20_1575 | 1 | 13 | 2.379635 | acyl-phosphate glycerol 3-phosphate | |
| HPSA20_1576 | -1 | 12 | 2.122964 | folB domain protein | |
| HPSA20_1577 | -1 | 10 | 1.702269 | hypothetical protein | |
| HPSA20_1578 | 0 | 10 | 1.434521 | hypothetical protein | |
| HPSA20_1579 | 0 | 10 | 1.348120 | tonB-dependent Receptor Plug domain protein | |
| HPSA20_1580 | 1 | 13 | -2.663477 | L-seryl-tRNA selenium transferase family | |
| HPSA20_1581 | 0 | 14 | -3.206567 | transcription termination factor NusA | |
| HPSA20_1582 | 3 | 19 | -4.939923 | hypothetical protein | |
| HPSA20_1583 | 2 | 19 | -5.017446 | hypothetical protein | |
| HPSA20_1584 | 1 | 15 | -4.675841 | hypothetical protein | |
| HPSA20_1585 | 1 | 13 | -4.880026 | hypothetical protein | |
| HPSA20_1586 | 0 | 11 | -3.876485 | hypothetical protein | |
| HPSA20_1587 | -1 | 10 | -4.206409 | eco57I restriction-modification methylase family | |
| HPSA20_1588 | 1 | 14 | -3.938280 | hypothetical protein | |
| HPSA20_1589 | 2 | 14 | -3.594326 | hypothetical protein | |
| HPSA20_1590 | 1 | 13 | -3.136382 | hypothetical protein | |
| HPSA20_1591 | 1 | 12 | -2.803256 | hypothetical protein | |
| HPSA20_1592 | 1 | 10 | -3.044733 | type III restriction enzyme, res subunit | |
| HPSA20_1593 | 1 | 10 | -2.563498 | hypothetical protein | |
| HPSA20_1594 | 1 | 9 | -2.119724 | D12 class N6 adenine-specific DNA | |
| HPSA20_1595 | -1 | 13 | -1.298000 | DEAD/DEAH box helicase family protein | |
| HPSA20_1596 | 0 | 13 | -0.954890 | putative lipoprotein | |
| HPSA20_1597 | -1 | 11 | -0.786551 | outer membrane family protein | |
| HPSA20_1598 | -1 | 9 | -0.000429 | exodeoxyribonuclease III | |
| HPSA20_1600 | 0 | 11 | 0.173952 | *hypothetical protein | |
| HPSA20_1601 | 2 | 14 | 0.176621 | chromosomal replication initiator protein DnaA | |
| HPSA20_1602 | 3 | 22 | -0.036180 | phosphorylase superfamily protein | |
| HPSA20_1603 | 1 | 17 | -2.673283 | hypothetical protein | |
| HPSA20_1604 | 1 | 13 | -2.050226 | glutamine-fructose-6-phosphate transaminase | |
| HPSA20_1605 | -1 | 14 | -2.977592 | thymidylate synthase, flavin-dependent | |
| HPSA20_1606 | -1 | 15 | -3.153206 | hypothetical protein | |
| HPSA20_1607 | -1 | 14 | -3.098558 | hypothetical protein | |
| HPSA20_1608 | -2 | 12 | -0.732709 | type I restriction modification DNA specificity | |
| HPSA20_1609 | -2 | 12 | 0.322318 | type I restriction-modification system, M | |
| HPSA20_1610 | -2 | 11 | 0.596462 | type I site-specific deoxyribonuclease, HsdR | |
| HPSA20_1611 | 0 | 14 | 2.181433 | hypothetical protein | |
| HPSA20_1612 | 1 | 15 | 3.547051 | hypothetical protein | |
| HPSA20_1613 | 2 | 15 | 4.092653 | tonB-dependent Receptor Plug domain protein | |
| HPSA20_1614 | -2 | 10 | 0.471372 | hypothetical protein | |
| HPSA20_1615 | -1 | 9 | 0.944110 | hypothetical protein | |
| HPSA20_1616 | -1 | 8 | 1.374487 | arginase | |
| HPSA20_1617 | -3 | 7 | 1.200780 | pyridine nucleotide-disulfide oxidoreductase | |
| HPSA20_1618 | -1 | 8 | -0.816939 | zinc-binding dehydrogenase family protein | |
| HPSA20_1619 | 1 | 9 | -1.603648 | hypothetical protein | |
| HPSA20_1620 | 2 | 9 | -1.082613 | outer membrane family protein | |
| HPSA20_1621 | 3 | 11 | -1.603809 | ATP-NAD kinase family protein | |
| HPSA20_1622 | 5 | 10 | -2.032008 | recF/RecN/SMC N terminal domain protein | |
| HPSA20_1623 | 0 | 10 | -2.105553 | fibronectin-binding A family protein | |
| HPSA20_1624 | -1 | 13 | -0.563234 | hypothetical protein | |
| HPSA20_1625 | 0 | 14 | -1.418412 | tetratricopeptide repeat family protein | |
| HPSA20_1626 | 0 | 15 | -0.968404 | hypothetical protein | |
| HPSA20_1627 | 0 | 16 | -1.674358 | exonuclease family protein | |
| HPSA20_1628 | 1 | 15 | -2.973507 | ribulose-phosphate 3-epimerase | |
| HPSA20_1629 | 2 | 15 | -3.332347 | hypothetical protein | |
| HPSA20_1630 | 1 | 13 | -1.791525 | fructose-1-6-bisphosphatase family protein | |
| HPSA20_1631 | 0 | 11 | -2.625751 | hypothetical protein | |
| HPSA20_1632 | 0 | 11 | -2.832742 | hypothetical protein | |
| HPSA20_1633 | -1 | 11 | -3.392683 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1586 | TYPE4SSCAGA | 25 | 0.043 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1601 | HTHFIS | 35 | 5e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1623 | FbpA_PF05833 | 115 | 5e-30 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| 25 | HPSA20_1647 | HPSA20_1668 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_1647 | -2 | 10 | -3.319506 | cell shape determining , MreB/Mrl family | |
| HPSA20_1648 | -1 | 10 | -5.121332 | rod shape-determining MreC family protein | |
| HPSA20_1649 | -1 | 10 | -5.134274 | type III restriction enzyme, res subunit | |
| HPSA20_1650 | -1 | 12 | -5.003838 | DNA methylase family protein | |
| HPSA20_1651 | 0 | 12 | -2.736201 | DNA methylase family protein | |
| HPSA20_1652 | 0 | 11 | -1.751113 | DNA methylase family protein | |
| HPSA20_1653 | 1 | 11 | -1.407944 | hypothetical protein | |
| HPSA20_1654 | 1 | 12 | -0.330918 | two-component transcriptional regulatory family | |
| HPSA20_1655 | 1 | 11 | 0.170502 | histidine kinase-, DNA gyrase B-, and HSP90-like | |
| HPSA20_1656 | 2 | 13 | 0.494294 | carbohydrate kinase family protein | |
| HPSA20_1657 | 0 | 11 | -0.709927 | replicative DNA helicase | |
| HPSA20_1658 | 3 | 14 | -0.995785 | competence family protein | |
| HPSA20_1659 | 0 | 15 | -0.596920 | hypothetical protein | |
| HPSA20_1660 | 0 | 15 | 0.096031 | ubiA prenyltransferase family protein | |
| HPSA20_1661 | 0 | 16 | -0.577078 | hypothetical protein | |
| HPSA20_1662 | -1 | 14 | -0.569494 | hypothetical protein | |
| HPSA20_1663 | -1 | 15 | 0.099427 | phosphatidylserine decarboxylase | |
| HPSA20_1664 | 0 | 18 | 0.277706 | quinolinate synthetase complex, A subunit | |
| HPSA20_1665 | -2 | 14 | -2.002113 | nicotinate-nucleotide diphosphorylase | |
| HPSA20_1666 | 0 | 16 | -5.200592 | hypothetical protein | |
| HPSA20_1667 | -1 | 11 | -2.975126 | hypothetical protein | |
| HPSA20_1668 | 0 | 12 | -3.083675 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1647 | SHAPEPROTEIN | 472 | e-170 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1654 | HTHFIS | 91 | 2e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_1661 | BONTOXILYSIN | 28 | 0.018 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| 26 | HPSA20_0046 | HPSA20_0052 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0046 | -2 | 14 | 0.638006 | virB8 family protein | |
| HPSA20_0047 | -2 | 14 | 0.523575 | conjugal transfer family protein | |
| HPSA20_0048 | -2 | 14 | 1.508560 | bacterial conjugation TrbI-like family protein | |
| HPSA20_0049 | -2 | 12 | 1.168530 | bacterial conjugation TrbI-like family protein | |
| HPSA20_0050 | -2 | 11 | 1.099987 | mannose-1-phosphate | |
| HPSA20_0051 | -2 | 10 | 1.032989 | GDP-mannose 4,6-dehydratase | |
| HPSA20_0052 | -1 | 12 | 0.921400 | NAD dependent epimerase/dehydratase family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0046 | PF04335 | 134 | 7e-41 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0047 | TYPE4SSCAGX | 32 | 0.003 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0051 | NUCEPIMERASE | 88 | 1e-21 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0052 | NUCEPIMERASE | 47 | 4e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 27 | HPSA20_0270 | HPSA20_0277 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0270 | -2 | 14 | 1.043689 | ferritin-like domain protein | |
| HPSA20_0271 | -3 | 14 | 0.894438 | histidine kinase-, DNA gyrase B-, and HSP90-like | |
| HPSA20_0272 | -3 | 12 | 1.670211 | hypothetical protein | |
| HPSA20_0273 | -2 | 12 | 2.032104 | flagellar P-ring family protein | |
| HPSA20_0274 | -3 | 10 | 1.874324 | type III restriction enzyme, res subunit | |
| HPSA20_0275 | -2 | 10 | 1.777593 | SPFH domain / Band 7 family protein | |
| HPSA20_0276 | -2 | 9 | 1.668226 | hypothetical protein | |
| HPSA20_0277 | -2 | 9 | 1.632311 | nickel import ATP-binding protein NikE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0270 | HELNAPAPROT | 150 | 7e-50 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0271 | PF06580 | 31 | 0.008 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0273 | FLGPRINGFLGI | 352 | e-123 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0274 | SECA | 29 | 0.047 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0277 | HTHFIS | 32 | 0.007 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 28 | HPSA20_0380 | HPSA20_0385 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0380 | -1 | 10 | 1.571571 | hypothetical protein | |
| HPSA20_0381 | -1 | 11 | 1.039549 | flagellar M-ring protein FliF | |
| HPSA20_0382 | -2 | 10 | 1.031193 | flagellar motor switch protein FliG | |
| HPSA20_0383 | -1 | 11 | 0.693244 | flagellar assembly FliH family protein | |
| HPSA20_0384 | 0 | 11 | 1.201747 | 1-deoxy-D-xylulose-5-phosphate synthase | |
| HPSA20_0385 | -1 | 15 | 0.025581 | GTP-binding protein LepA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0380 | FLGMRINGFLIF | 45 | 1e-09 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0381 | FLGMRINGFLIF | 521 | 0.0 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0382 | FLGMOTORFLIG | 348 | e-122 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0385 | TCRTETOQM | 143 | 3e-38 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 29 | HPSA20_0391 | HPSA20_0396 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0391 | -1 | 9 | -0.321167 | flagellar hook-basal body s family protein | |
| HPSA20_0392 | -2 | 9 | 0.205481 | major Facilitator Superfamily protein | |
| HPSA20_0393 | -1 | 10 | -0.106167 | calcineurin-like phosphoesterase family protein | |
| HPSA20_0394 | 1 | 13 | -0.246808 | ftsK/SpoIIIE family protein | |
| HPSA20_0395 | 1 | 14 | -1.089085 | PD-(D/E)XK nuclease superfamily protein | |
| HPSA20_0396 | 1 | 13 | -0.705143 | PD-(D/E)XK nuclease superfamily protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0391 | FLGHOOKAP1 | 31 | 0.004 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0392 | TCRTETB | 38 | 4e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0394 | IGASERPTASE | 35 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0396 | ALARACEMASE | 31 | 0.016 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 30 | HPSA20_0590 | HPSA20_0599 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0590 | 0 | 13 | -0.929337 | signal peptidase I | |
| HPSA20_0591 | -1 | 13 | -0.738558 | tetrahydrofolate dehydrogenase/cyclohydrolase, | |
| HPSA20_0592 | 1 | 13 | -1.366497 | sulfatase family protein | |
| HPSA20_0593 | 3 | 14 | -1.220559 | putative membrane protein | |
| HPSA20_0594 | 2 | 14 | -0.995819 | hypothetical protein | |
| HPSA20_0595 | 1 | 15 | -0.543039 | hypothetical protein | |
| HPSA20_0596 | 0 | 17 | -0.936723 | dihydroorotase, homodimeric type | |
| HPSA20_0597 | 0 | 19 | -2.702650 | tonB family C-terminal domain protein | |
| HPSA20_0598 | -1 | 16 | -2.585308 | hypothetical protein | |
| HPSA20_0599 | -2 | 16 | -1.867748 | flagellar motor switch protein FliN |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0590 | PREPILNPTASE | 29 | 0.025 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0593 | TYPE3IMSPROT | 30 | 0.002 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0596 | TYPE3OMGPROT | 29 | 0.019 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0597 | TONBPROTEIN | 50 | 4e-09 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0599 | FLGMOTORFLIN | 101 | 9e-31 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| 31 | HPSA20_0628 | HPSA20_0632 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| HPSA20_0628 | 2 | 9 | 0.414013 | efflux transporter, RND family, MFP subunit | |
| HPSA20_0629 | 2 | 9 | 0.172121 | acrB/AcrD/AcrF family protein | |
| HPSA20_0630 | 3 | 10 | -0.628925 | outer membrane family protein | |
| HPSA20_0631 | 3 | 10 | -0.638062 | vacuolating cytotoxin family protein | |
| HPSA20_0632 | 1 | 18 | -1.808938 | outer membrane autotransporter barrel domain |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0628 | RTXTOXIND | 51 | 2e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0629 | ACRIFLAVINRP | 893 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0631 | VACCYTOTOXIN | 35 | 0.006 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| HPSA20_0632 | VACCYTOTOXIN | 302 | 5e-95 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||