| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | BRADO0280 | BRADO0304 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0280 | 1 | 12 | 3.093315 | *glutamine amidotransferase | |
| BRADO0281 | 1 | 14 | 2.950038 | short chain dehydrogenase/reductase | |
| BRADO0282 | 1 | 14 | 3.039991 | hypothetical protein | |
| BRADO0283 | 0 | 13 | 2.515547 | cytochrome P450 hydroxylase superfamily | |
| BRADO0284 | 1 | 12 | 2.816803 | hydrolase | |
| BRADO0285 | 2 | 13 | 3.053030 | major facilitator superfamily permease | |
| BRADO0286 | 1 | 13 | 0.185111 | signal peptide | |
| BRADO0287 | 1 | 12 | 0.564411 | signal peptide | |
| BRADO0288 | 1 | 11 | 0.371640 | polysaccharide deacetylase | |
| BRADO0289 | -1 | 11 | 0.982748 | signal peptide | |
| BRADO0290 | -1 | 11 | -1.269252 | hypothetical protein | |
| BRADO0291 | -1 | 11 | 0.850501 | hypothetical protein | |
| BRADO0292 | -1 | 10 | 3.182663 | transposase from insertion sequence | |
| BRADO0293 | 0 | 9 | 3.280765 | IS66 Orf2 like | |
| BRADO0294 | 0 | 8 | 3.630498 | IS66 family transposase | |
| BRADO0295 | 1 | 9 | 4.490944 | phage protein Gp37/Gp68 | |
| BRADO0299 | 0 | 11 | 5.662059 | *signal peptide; HemY porphyrin biosynthesis | |
| BRADO0300 | 0 | 11 | 3.899031 | hypothetical protein | |
| BRADO0301 | -1 | 12 | 2.337970 | uroporphyrinogen-III synthase | |
| BRADO0302 | -2 | 14 | 1.949969 | DNA-binding/iron metalloprotein/AP endonuclease | |
| BRADO0303 | -1 | 16 | 1.102139 | NAD(P)H-dependent glycerol-3-phosphate | |
| BRADO0304 | 2 | 15 | -0.375877 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0281 | DHBDHDRGNASE | 77 | 5e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0285 | TCRTETA | 57 | 8e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0299 | IGASERPTASE | 52 | 5e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0300 | IGASERPTASE | 39 | 2e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 2 | BRADO0362 | BRADO0368 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0362 | 2 | 16 | 1.189563 | cytochrome c (cytochrome c552)(cycB) | |
| BRADO0363 | 3 | 15 | 1.551186 | hypothetical protein | |
| BRADO0364 | 5 | 15 | 0.738996 | hypothetical protein | |
| BRADO0365 | 5 | 17 | -0.734156 | isopropylmalate isomerase small subunit | |
| BRADO0366 | 5 | 13 | 0.044328 | hypothetical protein | |
| BRADO0367 | 4 | 14 | -0.019189 | hypothetical protein | |
| BRADO0368 | 3 | 14 | 0.212390 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0364 | PF05704 | 37 | 5e-05 | Capsular polysaccharide synthesis protein | |
>PF05704#Capsular polysaccharide synthesis protein | |||||
| 3 | BRADO0434 | BRADO0442 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0434 | 6 | 28 | -5.649797 | acetyltransferase | |
| BRADO0435 | 6 | 22 | -3.442852 | 50S ribosomal protein L27 | |
| BRADO0436 | 5 | 21 | -1.495241 | 50S ribosomal protein L21 | |
| BRADO0437 | 5 | 23 | -0.780638 | glucokinase | |
| BRADO0438 | 6 | 30 | -0.092193 | *hypothetical protein | |
| BRADO0439 | 3 | 20 | 2.422723 | hypothetical protein | |
| BRADO0441 | 1 | 17 | 4.410284 | ABC1 protein (chaperonin) | |
| BRADO0442 | -1 | 13 | 3.354978 | deoxyribodipyrimidine photo-lyase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0438 | HTHTETR | 30 | 0.005 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 4 | BRADO0452 | BRADO0490 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0452 | 2 | 21 | -2.046691 | bifunctional glutamine | |
| BRADO0453 | 5 | 29 | -3.792208 | oxidoreductase | |
| BRADO0454 | 6 | 36 | -4.898823 | hypothetical protein | |
| BRADO0456 | 8 | 39 | -5.094479 | hypothetical protein | |
| BRADO0458 | 9 | 42 | -6.318350 | hypothetical protein | |
| BRADO0462 | 9 | 42 | -5.961273 | phage related integrase | |
| BRADO0463 | 11 | 44 | -5.917252 | hypothetical protein | |
| BRADO0464 | 9 | 42 | -5.649977 | hypothetical protein | |
| BRADO0465 | 9 | 46 | -7.721221 | hypothetical protein | |
| BRADO0466 | 9 | 48 | -7.019833 | hypothetical protein | |
| BRADO0467 | 9 | 49 | -7.053198 | hypothetical protein | |
| BRADO0469 | 10 | 50 | -7.762098 | hypothetical protein | |
| BRADO0470 | 10 | 51 | -8.354793 | hypothetical protein | |
| BRADO0471 | 10 | 52 | -8.766186 | hypothetical protein | |
| BRADO0472 | 8 | 51 | -8.589748 | hypothetical protein | |
| BRADO0473 | 6 | 52 | -11.290211 | hypothetical protein | |
| BRADO0474 | 5 | 50 | -11.025387 | hypothetical protein | |
| BRADO0475 | 5 | 48 | -10.279681 | hypothetical protein | |
| BRADO0476 | 4 | 47 | -9.320201 | hypothetical protein | |
| BRADO0477 | 5 | 44 | -7.974941 | hypothetical protein | |
| BRADO0478 | 6 | 34 | -5.306432 | hypothetical protein | |
| BRADO0479 | 8 | 38 | -6.787596 | transcriptional regulator | |
| BRADO0480 | 7 | 40 | -7.914997 | hypothetical protein | |
| BRADO0481 | 7 | 45 | -9.142309 | hypothetical protein | |
| BRADO0483 | 8 | 49 | -10.314513 | hypothetical protein | |
| BRADO0486 | 8 | 48 | -10.248872 | hypothetical protein | |
| BRADO0487 | 8 | 52 | -10.866292 | hypothetical protein | |
| BRADO0488 | 8 | 51 | -10.325964 | methyltransferase | |
| BRADO0489 | 8 | 46 | -9.135755 | oxidoreductase | |
| BRADO0490 | 1 | 23 | -5.059744 | recombinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0453 | DHBDHDRGNASE | 80 | 5e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 5 | BRADO0542 | BRADO0556 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0542 | 5 | 22 | -4.925424 | efflux pump protein | |
| BRADO0543 | 5 | 26 | -5.822648 | MarR family transcriptional regulator | |
| BRADO0544 | 4 | 29 | -6.423978 | zinc uptake regulator ZUR | |
| BRADO0545 | 3 | 26 | -5.691953 | DMT family permease | |
| BRADO0546 | 3 | 29 | -6.470473 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |
| BRADO0547 | 4 | 26 | -5.401146 | hypothetical protein | |
| BRADO0548 | -2 | 7 | -0.238652 | hypothetical protein | |
| BRADO0549 | -2 | 9 | 0.729580 | plasmid stabilization system protein | |
| BRADO0551 | -2 | 10 | 1.542254 | sodium/hydrogen antiporter (exchanger) membrane | |
| BRADO0552 | -2 | 13 | 1.926254 | hypothetical protein | |
| BRADO0553 | -2 | 13 | 2.155091 | caspase (peptidase) | |
| BRADO0554 | 0 | 15 | 1.683501 | hypothetical protein | |
| BRADO0555 | 1 | 14 | 1.955607 | geranyltranstransferase | |
| BRADO0556 | 2 | 14 | 0.516164 | monofunctional biosynthetic peptidoglycan |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0542 | RTXTOXIND | 99 | 8e-25 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0553 | IGASERPTASE | 42 | 9e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 6 | BRADO0705 | BRADO0714 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0705 | 2 | 12 | 2.669100 | NAD-dependent phosphoglycerate dehydrogenase | |
| BRADO0706 | 1 | 13 | 2.947695 | metalloprotease inhibitor/calysin signal | |
| BRADO0707 | 1 | 13 | 3.144157 | hypothetical protein | |
| BRADO0708 | 1 | 13 | 3.316042 | signal peptide | |
| BRADO0709 | 1 | 12 | 3.279717 | transcriptional regulator | |
| BRADO0710 | 0 | 11 | 3.008418 | inner membrane transport protein | |
| BRADO0711 | -1 | 11 | 2.152267 | hypothetical protein | |
| BRADO0712 | 1 | 11 | 2.284073 | transcriptional regulator | |
| BRADO0713 | 2 | 9 | 2.162566 | DNA repair protein RadC | |
| BRADO0714 | 2 | 8 | 1.958430 | hypothetical protein |
| 7 | BRADO0785 | BRADO0834 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0785 | 2 | 29 | -3.093789 | sensor histidine kinase | |
| BRADO0787 | 7 | 43 | -5.577276 | *transcriptional regulator | |
| BRADO0788 | 7 | 44 | -5.389700 | hypothetical protein | |
| BRADO0790 | 7 | 43 | -4.933647 | thiamine-phosphate diphosphorylase | |
| BRADO0791 | 5 | 31 | -3.068546 | thiamine-phosphate pyrophosphorylase | |
| BRADO0792 | 5 | 32 | -3.278292 | hypothetical protein | |
| BRADO0793 | 4 | 27 | -2.110425 | hypothetical protein | |
| BRADO0794 | 2 | 24 | -1.201303 | hypothetical protein | |
| BRADO0795 | 2 | 23 | -1.466453 | hypothetical protein | |
| BRADO0796 | 3 | 25 | -2.789501 | conjugal transfer relaxase TraA | |
| BRADO0797 | 6 | 33 | -4.643422 | conjugal transfer protein, traC | |
| BRADO0798 | 6 | 33 | -4.769923 | hypothetical protein | |
| BRADO0799 | 6 | 34 | -5.778788 | hypothetical protein | |
| BRADO0800 | 7 | 38 | -8.585009 | hypothetical protein | |
| BRADO0801 | 6 | 44 | -9.126243 | hypothetical protein | |
| BRADO0802 | 4 | 41 | -6.845758 | hypothetical protein | |
| BRADO0803 | 1 | 31 | -4.197132 | hypothetical protein | |
| BRADO0804 | 1 | 31 | -4.216107 | hypothetical protein | |
| BRADO0805 | 0 | 26 | -3.719896 | hypothetical protein | |
| BRADO0807 | -1 | 24 | -2.847386 | subtilisin-like serine protease | |
| BRADO0808 | -1 | 23 | -2.615882 | serine protease | |
| BRADO0809 | -1 | 23 | -2.727437 | hypothetical protein | |
| BRADO0810 | 0 | 26 | -3.273663 | hypothetical protein | |
| BRADO0811 | 0 | 29 | -4.264192 | hypothetical protein | |
| BRADO0812 | 1 | 29 | -3.543008 | hypothetical protein | |
| BRADO0813 | -1 | 26 | -2.706933 | hypothetical protein | |
| BRADO0814 | -2 | 21 | -2.628178 | hypothetical protein | |
| BRADO0815 | -2 | 19 | -2.561930 | hypothetical protein | |
| BRADO0817 | -1 | 12 | -1.917906 | phage integrase | |
| BRADO0818 | 2 | 8 | 0.711370 | histidinol-phosphate aminotransferase | |
| BRADO0819 | 2 | 9 | 0.383570 | chemotaxis response regulator protein | |
| BRADO0820 | 3 | 10 | 0.376859 | chemotaxis protein methyltransferase | |
| BRADO0821 | 3 | 10 | 0.627518 | chemotaxis protein CheW | |
| BRADO0822 | 2 | 9 | 0.894021 | methyl-accepting chemotaxis receptor | |
| BRADO0823 | 2 | 10 | 1.370581 | methyl-accepting chemotaxis protein | |
| BRADO0824 | 2 | 10 | 1.205896 | chemotaxis protein CheW | |
| BRADO0825 | 1 | 10 | 1.765078 | chemotaxis protein CheA | |
| BRADO0826 | 0 | 13 | 2.012986 | hypothetical protein | |
| BRADO0827 | 2 | 12 | 2.382394 | cobalamin biosynthesis protein CobT | |
| BRADO0828 | 3 | 14 | 2.703452 | hypothetical protein | |
| BRADO0829 | 4 | 15 | 2.739519 | hypothetical protein | |
| BRADO0830 | 6 | 16 | 2.965808 | Zn-dependent protease | |
| BRADO0831 | 6 | 15 | 2.549447 | hypothetical protein | |
| BRADO0832 | 6 | 14 | 3.194431 | hypothetical protein | |
| BRADO0833 | 5 | 12 | 3.809273 | hypothetical protein | |
| BRADO0834 | 2 | 12 | 3.362723 | signal peptide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0785 | PF06580 | 31 | 0.010 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0807 | SUBTILISIN | 151 | 1e-44 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0812 | GPOSANCHOR | 35 | 8e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0819 | HTHFIS | 76 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0825 | PF06580 | 42 | 5e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0827 | PREPILNPTASE | 29 | 0.018 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0828 | cloacin | 32 | 0.002 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 8 | BRADO0875 | BRADO0889 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0875 | 3 | 12 | 3.190485 | hydantoin racemase | |
| BRADO0876 | 2 | 12 | 2.959520 | hypothetical protein | |
| BRADO0877 | 2 | 11 | 2.569326 | hypothetical protein | |
| BRADO0878 | 2 | 10 | 2.234261 | Short-chain dehydrogenase/reductase (SDR) family | |
| BRADO0879 | 2 | 11 | 1.815036 | ABC transporter ATP-binding protein | |
| BRADO0880 | 0 | 12 | 1.494469 | permease | |
| BRADO0881 | -1 | 13 | 0.672881 | alpha/beta hydrolase | |
| BRADO0882 | -2 | 15 | -0.152464 | metal-dependent hydrolase | |
| BRADO0883 | -2 | 14 | 0.344200 | RmlC-like cupin family protein | |
| BRADO0884 | -3 | 13 | 0.584494 | signal peptide | |
| BRADO0885 | -1 | 12 | 1.131224 | peptidase M29, aminopeptidase II | |
| BRADO0887 | 3 | 12 | 1.727326 | hypothetical protein | |
| BRADO0888 | 4 | 12 | 1.970865 | glyoxylase | |
| BRADO0889 | 2 | 12 | 1.268310 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0878 | DHBDHDRGNASE | 40 | 3e-06 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0889 | DHBDHDRGNASE | 43 | 4e-07 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 9 | BRADO0899 | BRADO0911 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0899 | 2 | 7 | -1.212845 | signal peptide | |
| BRADO0900 | 2 | 7 | -1.510173 | VBCS repeat-containing protein | |
| BRADO0901 | -2 | 10 | -1.532919 | guanylate cyclase | |
| BRADO0902 | -2 | 11 | -0.938694 | ABC transporter substrate-binding protein | |
| BRADO0903 | -2 | 13 | 0.410666 | peptide ABC transporter substrate-binding | |
| BRADO0904 | 1 | 13 | 1.031525 | peptide ABC transporter permease | |
| BRADO0905 | 1 | 12 | 1.039055 | peptide ABC transporter permease | |
| BRADO0906 | 2 | 11 | 2.129816 | peptide ABC transporter ATP-binding protein | |
| BRADO0907 | 3 | 12 | 2.220945 | hypothetical protein | |
| BRADO0908 | 3 | 12 | 2.352631 | glutamyl-tRNA(Gln) amidotransferase subunit A | |
| BRADO0909 | 3 | 13 | 1.534286 | peptide ABC transporter ATP-binding protein | |
| BRADO0910 | 1 | 13 | 1.264271 | transglycosylase-associated protein | |
| BRADO0911 | 2 | 13 | 1.425538 | HlyB family ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0900 | CABNDNGRPT | 36 | 0.001 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0906 | HTHFIS | 29 | 0.043 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 10 | BRADO0998 | BRADO1007 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0998 | 2 | 13 | 0.348080 | LysR family transcriptional regulator | |
| BRADO0999 | 2 | 15 | -0.834580 | prephenate dehydratase | |
| BRADO1000 | 2 | 16 | -1.117010 | 3-deoxy-manno-octulosonate cytidylyltransferase | |
| BRADO1001 | 2 | 16 | -0.976842 | cytochrome c-like protein | |
| BRADO1002 | 0 | 14 | 0.075927 | peptide ABC transporter substrate-binding | |
| BRADO1003 | -1 | 14 | 0.922693 | peptide ABC transporter substrate-binding | |
| BRADO1004 | -1 | 10 | 1.288596 | peptide ABC transporter membrane protein | |
| BRADO1005 | -1 | 9 | 2.234906 | peptide ABC transporter membrane protein | |
| BRADO1006 | 0 | 9 | 3.077714 | peptide ABC transporter ATP-binding protein | |
| BRADO1007 | -1 | 7 | 3.671257 | signal peptide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1007 | cloacin | 41 | 5e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 11 | BRADO1083 | BRADO1096 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1083 | 2 | 11 | 2.174911 | 3-oxoacyl-ACP reductase | |
| BRADO1084 | 2 | 13 | 1.560079 | glucose dehydrogenase | |
| BRADO1085 | 1 | 13 | 1.777833 | 3-oxoacyl-ACP reductase | |
| BRADO1086 | 2 | 13 | 2.061626 | hypothetical protein | |
| BRADO1087 | 2 | 11 | 0.840291 | hypothetical protein | |
| BRADO1088 | 0 | 10 | -0.817595 | membrane-bound lytic murein transglycosylase | |
| BRADO1089 | -1 | 10 | -1.609188 | glucose-1-phosphate uridylyltransferase | |
| BRADO1090 | -1 | 9 | -1.259173 | diguanylate cyclase | |
| BRADO1091 | -1 | 10 | -1.876338 | hypothetical protein | |
| BRADO1092 | -1 | 11 | -1.773703 | peptide ABC transporter substrate-binding | |
| BRADO1093 | 0 | 12 | -0.727633 | peptide ABC transporter substrate-binding | |
| BRADO1094 | 2 | 10 | 0.527170 | oligopeptide transport system permease | |
| BRADO1095 | 3 | 11 | 1.018133 | peptide ABC transporter membrane protein | |
| BRADO1096 | 2 | 11 | 0.948857 | peptide ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1083 | DHBDHDRGNASE | 112 | 5e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1085 | DHBDHDRGNASE | 105 | 1e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1087 | IGASERPTASE | 30 | 0.032 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 12 | BRADO1152 | BRADO1167 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1152 | 3 | 15 | 2.675484 | TetR family transcriptional regulator | |
| BRADO1153 | 4 | 13 | 2.162178 | 2-hydroxyacid dehydrogenase | |
| BRADO1154 | 7 | 15 | 2.400456 | hypothetical protein | |
| BRADO1155 | 5 | 14 | 1.817859 | hypothetical protein | |
| BRADO1156 | 1 | 13 | 1.430402 | RNA polymerase ECF-type sigma factor | |
| BRADO1157 | -1 | 9 | -0.192312 | hypothetical protein | |
| BRADO1158 | -1 | 9 | 0.048654 | glyoxalase | |
| BRADO1159 | -1 | 13 | -0.115031 | signal peptide | |
| BRADO1160 | -1 | 14 | -0.731714 | 3-oxoacyl-ACP reductase | |
| BRADO1161 | 1 | 18 | -0.941491 | hypothetical protein | |
| BRADO1162 | 2 | 19 | -1.078434 | MarR family transcriptional regulator | |
| BRADO1163 | 1 | 17 | 0.867372 | pyrimidine reductase | |
| BRADO1164 | 3 | 16 | 0.416305 | glutathione S-transferase | |
| BRADO1165 | 3 | 14 | 0.662540 | hypothetical protein | |
| BRADO1166 | 2 | 12 | 0.990441 | hypothetical protein | |
| BRADO1167 | 2 | 12 | 0.000180 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1152 | HTHTETR | 61 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1154 | FLGFLIH | 26 | 0.033 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1160 | DHBDHDRGNASE | 154 | 3e-48 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1161 | IGASERPTASE | 30 | 0.015 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 13 | BRADO1235 | BRADO1279 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1235 | 3 | 26 | -2.768073 | hypothetical protein | |
| BRADO1239 | 2 | 28 | -2.899071 | *conjugal transfer relaxase TraA | |
| BRADO1240 | 5 | 33 | -4.947113 | conjugal transfer protein traD | |
| BRADO1241 | 5 | 33 | -5.318405 | hypothetical protein | |
| BRADO1242 | 5 | 32 | -5.112413 | hypothetical protein | |
| BRADO1243 | 5 | 31 | -4.958130 | hypothetical protein | |
| BRADO1244 | 6 | 27 | -4.334128 | hypothetical protein | |
| BRADO1245 | 5 | 29 | -4.807995 | hypothetical protein | |
| BRADO1246 | 5 | 29 | -4.766613 | hypothetical protein | |
| BRADO1247 | 3 | 28 | -4.477565 | hypothetical protein | |
| BRADO1248 | 3 | 30 | -4.578506 | ATP-dependent DNA helicase | |
| BRADO1249 | 3 | 31 | -5.327162 | hypothetical protein | |
| BRADO1250 | 2 | 30 | -4.789694 | hypothetical protein | |
| BRADO1251 | 2 | 27 | -3.349845 | hypothetical protein | |
| BRADO1252 | 1 | 28 | -3.689617 | hypothetical protein | |
| BRADO1253 | 3 | 29 | -3.693450 | hypothetical protein | |
| BRADO1254 | 2 | 25 | -3.884292 | hypothetical protein | |
| BRADO1255 | 2 | 24 | -3.879285 | hypothetical protein | |
| BRADO1256 | 1 | 22 | -3.873034 | peroxidase | |
| BRADO1257 | 0 | 23 | -4.743355 | chloride peroxidase | |
| BRADO1258 | 1 | 18 | -3.968206 | phage-like integrase | |
| BRADO1259 | 1 | 14 | -3.236692 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO1260 | 1 | 16 | -2.585555 | LuxR family transcriptional regulator | |
| BRADO1262 | 2 | 16 | -2.323408 | bacteriophytochrome protein | |
| BRADO1263 | 1 | 18 | -2.034722 | anti-sigma-factor antagonist family protein | |
| BRADO1264 | 3 | 17 | -1.700906 | bacteriophytochrome heme oxygenase, BphO-like | |
| BRADO1265 | 4 | 18 | -1.975253 | phycocyanobilin:ferredoxin oxidoreductase, | |
| BRADO1266 | 4 | 21 | -2.253608 | 5-aminolevulinate synthase | |
| BRADO1267 | 5 | 20 | -2.227185 | gas vesicle synthesis protein N | |
| BRADO1268 | 5 | 21 | -1.816912 | hypothetical protein | |
| BRADO1269 | 3 | 12 | -0.096052 | hypothetical protein | |
| BRADO1270 | 3 | 13 | 0.479163 | gas vesicle synthesis protein GvpS | |
| BRADO1271 | 2 | 14 | 0.744490 | gas vesicle synthesis protein | |
| BRADO1272 | 3 | 13 | 0.736996 | gas vesicle synthesis protein | |
| BRADO1273 | 2 | 14 | 1.165495 | gas vesicle synthesis protein | |
| BRADO1274 | 2 | 15 | 1.099208 | vesicle-fusing ATPase | |
| BRADO1275 | 2 | 16 | 0.683276 | gas vesicle synthesis protein | |
| BRADO1276 | 2 | 15 | 0.367503 | gas vesicle synthesis protein | |
| BRADO1277 | 2 | 16 | 0.855403 | gas vesicle synthesis protein | |
| BRADO1278 | 2 | 16 | 1.037091 | hypothetical protein | |
| BRADO1279 | 2 | 16 | 0.610019 | gas vesicle synthesis protein K |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1243 | SUBTILISIN | 53 | 2e-09 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1248 | SHAPEPROTEIN | 29 | 0.030 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1250 | SUBTILISIN | 35 | 0.001 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1251 | PF07132 | 43 | 2e-06 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1274 | HTHFIS | 31 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 14 | BRADO1369 | BRADO1376 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1369 | 4 | 24 | -4.976606 | hypothetical protein | |
| BRADO1370 | 6 | 42 | -8.630601 | hypothetical protein | |
| BRADO1371 | 5 | 38 | -7.950804 | RNA polymerase factor sigma-32 | |
| BRADO1372 | 6 | 40 | -7.929643 | pseudouridine synthase | |
| BRADO1373 | 7 | 44 | -8.790524 | hypothetical protein | |
| BRADO1375 | 7 | 39 | -7.965398 | *adenine-specific DNA methyltransferase | |
| BRADO1376 | 4 | 20 | -3.544497 | type III restriction enzyme |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1375 | AUTOINDCRSYN | 30 | 0.027 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 15 | BRADO1391 | BRADO1398 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1391 | 2 | 11 | 1.042800 | hypothetical protein | |
| BRADO1392 | 1 | 10 | 1.246033 | sugar ABC transporter substrate-binding protein | |
| BRADO1393 | 3 | 9 | 1.402383 | sugar ABC transporter | |
| BRADO1394 | 4 | 9 | 1.824267 | high-affinity D-ribose ABC transporter | |
| BRADO1395 | 3 | 8 | 2.016563 | xylulokinase | |
| BRADO1396 | 3 | 10 | 1.700288 | glucose 1-dehydrogenase | |
| BRADO1397 | 3 | 10 | 1.667673 | hypothetical protein | |
| BRADO1398 | 3 | 11 | 1.873324 | choline dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1396 | DHBDHDRGNASE | 122 | 1e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 16 | BRADO1519 | BRADO1527 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1519 | 3 | 10 | 2.591892 | periplasmic copper binding protein | |
| BRADO1520 | 3 | 9 | 1.851240 | multicopper oxidase copper resistance protein A | |
| BRADO1521 | 2 | 11 | 2.111740 | Outer membrane efflux protein copper resistance | |
| BRADO1522 | 4 | 13 | 1.223751 | hypothetical protein | |
| BRADO1523 | 3 | 13 | 0.387697 | hypothetical protein | |
| BRADO1524 | 3 | 12 | 0.504321 | major facilitator superfamily permease | |
| BRADO1526 | 2 | 12 | 0.165459 | TRAP-type transport system | |
| BRADO1527 | 2 | 14 | 0.200037 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1524 | TCRTETB | 36 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 17 | BRADO1574 | BRADO1584 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1574 | 2 | 9 | 1.570265 | ABC transporter | |
| BRADO1575 | 2 | 10 | 2.103254 | carbohydrate kinase | |
| BRADO1576 | 3 | 10 | 1.866929 | glucokinase | |
| BRADO1577 | 1 | 11 | 0.967719 | beta-glucosidase | |
| BRADO1578 | 2 | 13 | 0.738189 | peptide ABC transporter permease | |
| BRADO1579 | 0 | 13 | 0.539991 | peptide ABC transporter permease | |
| BRADO1580 | -1 | 13 | 0.249775 | peptide ABC transporter ATP-binding protein | |
| BRADO1581 | -1 | 13 | -0.125817 | peptide ABC transporter ATP-binding protein | |
| BRADO1582 | -1 | 10 | -0.496165 | peptide ABC transporter substrate-binding | |
| BRADO1583 | 3 | 13 | 0.738847 | hypothetical protein | |
| BRADO1584 | 4 | 13 | 1.305086 | thioredoxin reductase |
| 18 | BRADO1601 | BRADO1614 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1601 | 2 | 12 | 1.130077 | histidine utilization repressor | |
| BRADO1602 | 2 | 11 | 1.929845 | N-formimino-L-glutamate deiminase | |
| BRADO1603 | 1 | 11 | 1.704898 | imidazolonepropionase | |
| BRADO1604 | 2 | 10 | 1.762885 | histidine ammonia-lyase | |
| BRADO1605 | 1 | 9 | 1.398251 | urocanate hydratase | |
| BRADO1606 | 2 | 11 | 2.322522 | magnesium chelatase | |
| BRADO1607 | 2 | 11 | 2.355016 | magnesium chelatase subunit D | |
| BRADO1608 | 2 | 12 | 1.671853 | alpha/beta hydrolase | |
| BRADO1609 | 2 | 12 | 2.582892 | alpha/beta hydrolase | |
| BRADO1610 | 3 | 11 | 3.075105 | phytoene dehydrogenase | |
| BRADO1611 | 3 | 11 | 4.139623 | phytoene synthase | |
| BRADO1612 | 2 | 12 | 3.701233 | hypothetical protein | |
| BRADO1613 | 1 | 10 | 2.986474 | neurosporene and anhydrorhodovibrin hydratase | |
| BRADO1614 | 1 | 10 | 3.105177 | hydroxyneurosporene and rhodopin dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1606 | HTHFIS | 36 | 3e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1607 | HTHFIS | 31 | 0.018 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 19 | BRADO1690 | BRADO1695 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1690 | 4 | 16 | 1.357429 | hydrogenase expression/formation protein hupH | |
| BRADO1691 | 5 | 16 | 0.144734 | rubredoxin hupI | |
| BRADO1692 | 4 | 14 | 0.638377 | hydrogenase expression/formation protein hupJ | |
| BRADO1693 | 4 | 15 | 0.268988 | hydrogenase expression/formation protein hupK | |
| BRADO1694 | 4 | 12 | -0.392265 | hydrogenase expression/formation protein HypA | |
| BRADO1695 | 3 | 12 | -0.419112 | hypothetical protein |
| 20 | BRADO1822 | BRADO1835 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1822 | 2 | 12 | -1.265788 | chemotaxis protein CheA | |
| BRADO1823 | 2 | 13 | -1.567107 | chemotaxis protein CheW | |
| BRADO1824 | 1 | 13 | -1.680039 | methyl-accepting chemotaxis protein | |
| BRADO1825 | 3 | 16 | -1.757276 | chemotaxis protein methyltransferase | |
| BRADO1826 | 2 | 13 | -0.759800 | chemotaxis protein CheD | |
| BRADO1827 | 2 | 13 | -0.445010 | chemotaxis response regulator protein | |
| BRADO1828 | 4 | 10 | -1.036586 | hypothetical protein | |
| BRADO1829 | 3 | 8 | -0.649919 | anti-sigma factor antagonist | |
| BRADO1830 | 3 | 8 | -0.515890 | hypothetical protein | |
| BRADO1831 | 1 | 7 | 0.007554 | response regulator serine phosphatase | |
| BRADO1832 | 1 | 7 | 0.138942 | hypothetical protein | |
| BRADO1833 | 0 | 7 | 0.134768 | hypothetical protein | |
| BRADO1834 | -1 | 9 | 0.925347 | hypothetical protein | |
| BRADO1835 | 2 | 13 | 1.298182 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1822 | PF06580 | 40 | 2e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1827 | HTHFIS | 74 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1831 | HTHFIS | 71 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1833 | HTHFIS | 64 | 9e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 21 | BRADO1995 | BRADO2000 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1995 | 1 | 12 | 3.024649 | hypothetical protein | |
| BRADO1996 | 2 | 13 | 2.558944 | protease htpX membrane protein | |
| BRADO1997 | 4 | 14 | 2.925284 | signal peptide | |
| BRADO1998 | 4 | 13 | 2.841015 | hypothetical protein | |
| BRADO1999 | 3 | 11 | 2.995982 | SAM methyltransferase | |
| BRADO2000 | 3 | 12 | 2.355989 | chromosome segregation protein SMC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2000 | GPOSANCHOR | 57 | 2e-10 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 22 | BRADO2168 | BRADO2229 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2168 | 2 | 12 | 0.608814 | N-methyltryptophan oxidase | |
| BRADO2169 | 2 | 13 | -0.605384 | enoyl-CoA hydratase | |
| BRADO2170 | 2 | 12 | -0.578109 | hypothetical protein | |
| BRADO2171 | 1 | 17 | -2.400276 | hypothetical protein | |
| BRADO2172 | -1 | 10 | -0.491168 | non-heme manganese-containing catalase | |
| BRADO2175 | -1 | 16 | -1.147480 | hypothetical protein | |
| BRADO2176 | -1 | 15 | -1.270875 | hypothetical protein | |
| BRADO2177 | -1 | 18 | -1.818578 | hypothetical protein | |
| BRADO2178 | -2 | 16 | -1.784222 | hypothetical protein | |
| BRADO2179 | -1 | 14 | -1.821882 | acyl-CoA dehydrogenase | |
| BRADO2180 | 0 | 22 | -3.039536 | *hypothetical protein | |
| BRADO2181 | 0 | 20 | -2.469036 | hypothetical protein | |
| BRADO2183 | 0 | 21 | -2.774354 | hypothetical protein | |
| BRADO2184 | 0 | 19 | -2.195838 | bifunctional GDP-fucose synthetase | |
| BRADO2185 | 1 | 23 | -2.282394 | GDP-D-mannose dehydratase | |
| BRADO2186 | 2 | 21 | -1.909898 | hypothetical protein | |
| BRADO2187 | 1 | 20 | -2.279148 | hypothetical protein | |
| BRADO2188 | 1 | 21 | -2.619778 | hypothetical protein | |
| BRADO2189 | 0 | 20 | -2.226178 | peptide signal | |
| BRADO2190 | 1 | 23 | -2.239342 | hypothetical protein | |
| BRADO2191 | 0 | 20 | -2.269090 | general secretion pathway protein D signal | |
| BRADO2193 | -1 | 28 | -3.156291 | general secretion pathway protein H | |
| BRADO2194 | 1 | 30 | -3.755429 | general secretion pathway protein I signal | |
| BRADO2195 | 0 | 27 | -2.835537 | general secretion pathway protein J | |
| BRADO2196 | 0 | 26 | -2.692232 | general secretion pathway protein K | |
| BRADO2197 | 0 | 24 | -2.422972 | hypothetical protein | |
| BRADO2198 | -1 | 25 | -2.083961 | hypothetical protein | |
| BRADO2199 | -1 | 23 | -1.759864 | hypothetical protein | |
| BRADO2200 | -1 | 20 | -2.275456 | permease membrane protein | |
| BRADO2201 | -1 | 22 | -3.330020 | glycosyl transferase family protein | |
| BRADO2202 | -1 | 20 | -3.521051 | aldo/keto reductase | |
| BRADO2203 | -1 | 22 | -4.106341 | hypothetical protein | |
| BRADO2204 | 0 | 23 | -5.181851 | hypothetical protein | |
| BRADO2205 | -1 | 23 | -5.088504 | alginate o-acetyltransferase AlgI | |
| BRADO2206 | 0 | 21 | -4.060202 | S-adenosyl-L-methionine-dependent | |
| BRADO2207 | 3 | 19 | -3.195137 | carbamoyltransferase | |
| BRADO2208 | 3 | 19 | -3.215137 | hypothetical protein | |
| BRADO2209 | 3 | 18 | -3.080045 | group 2 family glycosyl transferase | |
| BRADO2210 | 4 | 19 | -2.811995 | peptidyl-prolyl isomerase | |
| BRADO2211 | 4 | 18 | -2.747275 | phosphatase signal peptide | |
| BRADO2213 | 3 | 20 | -2.816085 | heme utilization or adhesion protein | |
| BRADO2214 | 0 | 26 | -2.294655 | hypothetical protein | |
| BRADO2217 | 0 | 26 | -2.372859 | capsule polysaccharide export outer membrane | |
| BRADO2218 | 0 | 24 | -3.154540 | glycosyl transferase family protein | |
| BRADO2219 | -1 | 16 | -2.036499 | hypothetical protein | |
| BRADO2221 | -1 | 16 | -2.506228 | hypothetical protein | |
| BRADO2222 | -2 | 17 | -1.853499 | transglycosylase | |
| BRADO2224 | 1 | 19 | -3.522761 | RNA polymerase ECF-subfamily sigma-70 factor | |
| BRADO2225 | 2 | 16 | -3.227649 | signal peptide; hemolysin activation/secretion | |
| BRADO2226 | 2 | 13 | -1.601789 | biopolymer transport protein ExbB/TolQ family | |
| BRADO2227 | 3 | 17 | -2.373421 | biopolymer transport protein ExbD/TolR family | |
| BRADO2228 | 3 | 17 | -2.239157 | hypothetical protein | |
| BRADO2229 | 3 | 20 | -2.504506 | signal peptide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2184 | NUCEPIMERASE | 96 | 1e-24 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2185 | NUCEPIMERASE | 94 | 5e-24 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2186 | cloacin | 29 | 0.021 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2187 | cloacin | 41 | 4e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2191 | BCTERIALGSPD | 210 | 9e-61 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2193 | BCTERIALGSPG | 31 | 8e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2194 | PilS_PF08805 | 27 | 0.022 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2213 | PF05860 | 53 | 8e-10 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2226 | PERTACTIN | 35 | 0.001 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2228 | TONBPROTEIN | 39 | 8e-06 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2229 | PF03544 | 30 | 0.037 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 23 | BRADO2927 | BRADO2952 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2927 | 3 | 15 | -1.194760 | Ars family transcriptional regulator | |
| BRADO2928 | 3 | 16 | -1.543343 | hypothetical protein | |
| BRADO2929 | 4 | 16 | -1.191364 | glutathione S-transferase | |
| BRADO2930 | 4 | 16 | -0.353480 | hypothetical protein | |
| BRADO2931 | 3 | 17 | 0.248772 | hypothetical protein | |
| BRADO2932 | 0 | 13 | 4.149013 | short chain oxidoreductase | |
| BRADO2933 | 0 | 12 | 3.977958 | *hypothetical protein | |
| BRADO2934 | 0 | 10 | 3.239589 | signal peptide | |
| BRADO2935 | 0 | 9 | 2.437592 | salicylate hydroxylase | |
| BRADO2936 | -1 | 8 | 1.235794 | hypothetical protein | |
| BRADO2937 | 0 | 10 | 1.588458 | signal peptide | |
| BRADO2938 | 0 | 11 | 0.139236 | hydrolase | |
| BRADO2939 | -1 | 11 | -0.779402 | hypothetical protein | |
| BRADO2940 | 3 | 16 | -0.976802 | serine acetyltransferase | |
| BRADO2941 | 0 | 17 | -0.717871 | hypothetical protein | |
| BRADO2942 | 1 | 18 | 0.994743 | hypothetical protein | |
| BRADO2943 | 0 | 21 | 0.485166 | hypothetical protein | |
| BRADO2944 | 0 | 21 | -0.351871 | hexapeptide repeat-containing protein | |
| BRADO2945 | 3 | 27 | 0.896879 | hypothetical protein | |
| BRADO2946 | 2 | 25 | -0.463096 | hypothetical protein | |
| BRADO2947 | 3 | 19 | -0.261291 | hypothetical protein | |
| BRADO2948 | 2 | 21 | -1.456937 | hypothetical protein | |
| BRADO2949 | 3 | 17 | -1.083198 | hypothetical protein | |
| BRADO2950 | 3 | 17 | -0.827083 | hypothetical protein | |
| BRADO2951 | 3 | 17 | -0.810584 | transposase | |
| BRADO2952 | 2 | 16 | -0.526970 | carboxymethylenebutenolidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2932 | DHBDHDRGNASE | 70 | 2e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2951 | IGASERPTASE | 41 | 9e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 24 | BRADO2994 | BRADO3008 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2994 | 2 | 14 | 0.163697 | beta lactamase D-alanyl-D-alanine | |
| BRADO2995 | 10 | 20 | -1.051099 | signal peptide | |
| BRADO2996 | 11 | 23 | -0.350774 | hypothetical protein | |
| BRADO2997 | 9 | 25 | -0.817475 | hypothetical protein | |
| BRADO2998 | 9 | 25 | -1.527520 | signal peptide | |
| BRADO2999 | 10 | 20 | -1.291054 | hypothetical protein | |
| BRADO3000 | 7 | 17 | -0.572356 | outer-membrane immunogenic protein | |
| BRADO3001 | 7 | 18 | -0.272027 | hypothetical protein | |
| BRADO3002 | 5 | 17 | 0.321309 | hypothetical protein | |
| BRADO3003 | 4 | 18 | 0.509240 | hypothetical protein | |
| BRADO3004 | 2 | 11 | 1.160146 | *signal peptide | |
| BRADO3005 | 3 | 16 | 0.771875 | signal peptide | |
| BRADO3006 | 2 | 16 | 0.333068 | signal peptide | |
| BRADO3007 | 3 | 18 | 0.403459 | rRNA methylase 23S rRNA | |
| BRADO3008 | 2 | 19 | -0.337202 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3000 | OMPADOMAIN | 57 | 1e-11 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 25 | BRADO3204 | BRADO3218 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3204 | 2 | 16 | -2.483919 | thioredoxin | |
| BRADO3205 | 2 | 15 | -3.860449 | hypothetical protein | |
| BRADO3206 | 0 | 18 | -4.200528 | nitrogen fixation protein FixG | |
| BRADO3207 | 3 | 27 | -4.824933 | hypothetical protein | |
| BRADO3209 | 2 | 28 | -3.565813 | hypothetical protein | |
| BRADO3210 | 2 | 27 | -3.295560 | hypothetical protein | |
| BRADO3211 | 2 | 28 | -3.131922 | hypothetical protein | |
| BRADO3212 | 1 | 29 | -3.082702 | hypothetical protein | |
| BRADO3213 | 2 | 29 | -2.746582 | ATPase AAA | |
| BRADO3214 | 3 | 28 | -2.953343 | hypothetical protein | |
| BRADO3215 | 5 | 30 | -3.456679 | hypothetical protein | |
| BRADO3216 | 4 | 30 | -4.538134 | hypothetical protein | |
| BRADO3217 | 5 | 28 | -4.659088 | hypothetical protein | |
| BRADO3218 | 5 | 19 | -2.062864 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3212 | V8PROTEASE | 42 | 2e-06 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3213 | HTHFIS | 38 | 6e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 26 | BRADO3410 | BRADO3429 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3410 | -1 | 12 | 3.310074 | high-affinity branched-chain amino acid ABC | |
| BRADO3414 | -2 | 15 | 2.182810 | hypothetical protein | |
| BRADO3416 | -1 | 10 | 1.819540 | hypothetical protein | |
| BRADO3417 | -1 | 10 | 1.827138 | NADPH-dependent FMN reductase | |
| BRADO3418 | -1 | 10 | 2.150676 | hypothetical protein | |
| BRADO3419 | -1 | 10 | 1.979703 | LysR family transcriptional regulator | |
| BRADO3420 | -1 | 10 | 1.046087 | 4-aminobutyrate aminotransferase | |
| BRADO3421 | 0 | 15 | 0.787822 | acetylornithine deacetylase | |
| BRADO3422 | 3 | 16 | 1.996991 | 2-hydroxyacid dehydrogenase | |
| BRADO3423 | 2 | 18 | 2.659196 | hypothetical protein | |
| BRADO3424 | 2 | 16 | -0.310916 | hypothetical protein | |
| BRADO3425 | 2 | 15 | 0.135762 | hypothetical protein | |
| BRADO3426 | 1 | 14 | 0.005707 | hypothetical protein | |
| BRADO3427 | 1 | 13 | 0.304211 | hypothetical protein | |
| BRADO3428 | 0 | 14 | 0.801999 | cytochrome c region | |
| BRADO3429 | 2 | 13 | 0.578886 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3427 | PHPHTRNFRASE | 31 | 0.008 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 27 | BRADO3459 | BRADO3470 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3459 | 0 | 10 | 3.576539 | acyl-CoA dehydrogenase | |
| BRADO3460 | -1 | 12 | 3.171570 | signal peptide | |
| BRADO3461 | 0 | 14 | 3.509391 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO3464 | 0 | 11 | 2.580807 | hypothetical protein | |
| BRADO3465 | 0 | 11 | 2.993978 | signal peptide | |
| BRADO3466 | -2 | 16 | 0.973293 | cytochrome P450 | |
| BRADO3468 | 4 | 31 | -3.883009 | hypothetical protein | |
| BRADO3469 | 3 | 12 | -2.004920 | hypothetical protein | |
| BRADO3470 | 3 | 11 | -1.738685 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3469 | BACYPHPHTASE | 28 | 0.017 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3470 | CHANLCOLICIN | 29 | 0.005 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 28 | BRADO3587 | BRADO3624 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3587 | 2 | 10 | 1.572525 | lysyl-tRNA synthetase | |
| BRADO3588 | 2 | 9 | 0.860141 | lysine 2,3-aminomutase | |
| BRADO3589 | 1 | 9 | 0.206240 | signal peptide | |
| BRADO3590 | 2 | 10 | 0.265033 | phospho-2-dehydro-3-deoxyheptonate aldolase | |
| BRADO3591 | 1 | 12 | 0.107681 | hypothetical protein | |
| BRADO3592 | 0 | 12 | -0.039719 | hypothetical protein | |
| BRADO3594 | 1 | 16 | -3.299579 | 5-aminolevulinate synthase | |
| BRADO3595 | 4 | 15 | -3.197614 | hypothetical protein | |
| BRADO3596 | 4 | 18 | -2.906384 | hypothetical protein | |
| BRADO3597 | 3 | 17 | -2.656731 | hypothetical protein | |
| BRADO3598 | 5 | 23 | -2.860715 | hypothetical protein | |
| BRADO3599 | 5 | 25 | -2.671639 | *hypothetical protein | |
| BRADO3600 | 3 | 21 | 2.417925 | phage integrase | |
| BRADO3601 | 1 | 24 | 1.415647 | hypothetical protein | |
| BRADO3602 | 2 | 24 | 0.598988 | hypothetical protein | |
| BRADO3603 | 1 | 24 | -0.235203 | hypothetical protein | |
| BRADO3604 | 0 | 21 | 0.312070 | hypothetical protein | |
| BRADO3605 | 1 | 20 | -0.494868 | hypothetical protein | |
| BRADO3606 | 1 | 18 | -1.128994 | hypothetical protein | |
| BRADO3607 | 3 | 19 | -0.114591 | hypothetical protein | |
| BRADO3608 | 3 | 14 | 0.652224 | hypothetical protein | |
| BRADO3609 | 2 | 14 | 0.710059 | hypothetical protein | |
| BRADO3610 | 1 | 12 | 0.128468 | hypothetical protein | |
| BRADO3611 | 2 | 14 | 0.296088 | hypothetical protein | |
| BRADO3612 | 1 | 13 | 0.511452 | hypothetical protein | |
| BRADO3613 | 2 | 11 | 0.967341 | hypothetical protein | |
| BRADO3614 | 3 | 17 | 0.539991 | hypothetical protein | |
| BRADO3615 | 1 | 17 | -0.389497 | hypothetical protein | |
| BRADO3616 | 0 | 22 | -1.950784 | hypothetical protein | |
| BRADO3618 | 1 | 22 | -2.515565 | hypothetical protein | |
| BRADO3619 | 2 | 24 | -3.263726 | hypothetical protein | |
| BRADO3620 | 4 | 34 | -6.882979 | hypothetical protein | |
| BRADO3621 | 2 | 26 | -6.622370 | transcription antitermination protein NusG | |
| BRADO3622 | 2 | 20 | -5.389584 | hypothetical protein | |
| BRADO3623 | 2 | 17 | -4.155572 | hypothetical protein | |
| BRADO3624 | 1 | 15 | -3.204342 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3613 | PRTACTNFAMLY | 32 | 0.006 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 29 | BRADO3642 | BRADO3651 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3642 | 2 | 12 | -0.514393 | hypothetical protein | |
| BRADO3643 | 2 | 12 | -0.176691 | hypothetical protein | |
| BRADO3644 | 4 | 13 | -0.302239 | hypothetical protein | |
| BRADO3645 | 4 | 16 | -1.090863 | tail assembly protein-like protein | |
| BRADO3646 | 3 | 14 | -0.620872 | tail fiber protein | |
| BRADO3647 | 5 | 18 | -0.939684 | hypothetical protein | |
| BRADO3648 | 5 | 18 | -0.935787 | hypothetical protein | |
| BRADO3649 | 3 | 19 | -1.556690 | hypothetical protein | |
| BRADO3650 | 1 | 24 | -2.591125 | hypothetical protein | |
| BRADO3651 | 2 | 15 | 1.010136 | hypothetical protein |
| 30 | BRADO3698 | BRADO3717 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3698 | 2 | 14 | 2.325012 | hypothetical protein | |
| BRADO3699 | 2 | 12 | 2.395063 | hypothetical protein | |
| BRADO3700 | 1 | 10 | 3.178622 | major facilitator superfamily permease | |
| BRADO3701 | 0 | 12 | 3.137692 | hypothetical protein | |
| BRADO3702 | 0 | 11 | 3.071915 | fumarylacetoacetate hydrolase | |
| BRADO3703 | -1 | 12 | 2.784660 | signal peptide | |
| BRADO3704 | -2 | 14 | 3.319996 | hypothetical protein | |
| BRADO3705 | 0 | 12 | 3.617954 | 3-oxoacyl-ACP reductase | |
| BRADO3706 | -1 | 11 | 3.104093 | AhpC/Tsa family protein | |
| BRADO3707 | 0 | 11 | 3.062958 | 6-oxocamphor hydrolase | |
| BRADO3708 | 0 | 12 | 2.914661 | LysR family transcriptional regulator | |
| BRADO3709 | 0 | 11 | 2.670693 | signal peptide | |
| BRADO3710 | 1 | 11 | 2.565379 | protein serine-threonine phosphatase | |
| BRADO3711 | 0 | 14 | 1.956182 | hypothetical protein | |
| BRADO3712 | 0 | 17 | 1.277998 | ribonucleoprotein-like protein | |
| BRADO3713 | 1 | 17 | 1.511403 | *hypothetical protein | |
| BRADO3716 | 1 | 16 | 1.617743 | signal peptide | |
| BRADO3717 | 2 | 16 | 1.236508 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3703 | NUCEPIMERASE | 68 | 4e-15 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3705 | DHBDHDRGNASE | 89 | 3e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3713 | PF03944 | 27 | 0.014 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
| 31 | BRADO3884 | BRADO3896 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3884 | 2 | 28 | -3.634582 | outer membrane protein TolC | |
| BRADO3885 | 0 | 33 | -5.538441 | protein-L-isoaspartate O-methyltransferase | |
| BRADO3886 | -1 | 31 | -5.849786 | hypothetical protein | |
| BRADO3887 | -1 | 28 | -4.030537 | *hypothetical protein | |
| BRADO3889 | -1 | 29 | -3.961617 | hypothetical protein | |
| BRADO3890 | -3 | 26 | -3.347178 | hypothetical protein | |
| BRADO3891 | 0 | 27 | -3.824193 | hypothetical protein | |
| BRADO3892 | 0 | 16 | -3.013309 | NUDIX-like hydrolase | |
| BRADO3893 | 0 | 16 | -3.023066 | hypothetical protein | |
| BRADO3894 | 1 | 15 | -3.876324 | two-component response regulatory protein, | |
| BRADO3895 | 2 | 13 | -1.854464 | two-component response regulatory protein, | |
| BRADO3896 | 2 | 11 | -1.072595 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3894 | HTHFIS | 88 | 3e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3895 | HTHFIS | 74 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 32 | BRADO3923 | BRADO3946 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3923 | 2 | 43 | -3.976549 | *hypothetical protein | |
| BRADO3924 | 6 | 45 | -6.767181 | hypothetical protein | |
| BRADO3925 | 9 | 50 | -7.992004 | hypothetical protein | |
| BRADO3926 | 10 | 49 | -8.185612 | hypothetical protein | |
| BRADO3927 | 8 | 38 | -5.721692 | resolvase | |
| BRADO3928 | 8 | 38 | -6.277413 | resolvase | |
| BRADO3930 | 9 | 38 | -6.519689 | hypothetical protein | |
| BRADO3931 | 4 | 32 | -3.907712 | hypothetical protein | |
| BRADO3932 | 1 | 21 | -1.378475 | hypothetical protein | |
| BRADO3933 | 2 | 21 | -1.521865 | methyltransferase FkbM | |
| BRADO3934 | 3 | 21 | -3.789906 | hypothetical protein | |
| BRADO3935 | 2 | 19 | -3.129734 | hypothetical protein | |
| BRADO3936 | 2 | 18 | -2.804130 | hypothetical protein | |
| BRADO3937 | 2 | 18 | -3.707321 | signal peptide | |
| BRADO3939 | 0 | 20 | -3.210009 | hypothetical protein | |
| BRADO3940 | 2 | 21 | -2.494369 | hypothetical protein | |
| BRADO3941 | 3 | 13 | -2.007705 | hypothetical protein | |
| BRADO3942 | 3 | 13 | -1.913871 | hypothetical protein | |
| BRADO3943 | 2 | 10 | -2.088413 | hypothetical protein | |
| BRADO3944 | 2 | 10 | -2.197327 | oxidoreductase NAD(P)-binding subunit | |
| BRADO3945 | 3 | 10 | -2.335580 | hypothetical protein | |
| BRADO3946 | 3 | 10 | -2.318432 | sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3942 | TCRTETB | 26 | 0.041 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3943 | TCRTETOQM | 25 | 0.039 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3944 | DHBDHDRGNASE | 92 | 1e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3946 | HTHFIS | 75 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 33 | BRADO3994 | BRADO4006 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3994 | 2 | 13 | -0.865748 | signal peptide | |
| BRADO3995 | 0 | 12 | 0.024052 | peptidyl prolyl cis-trans isomerase | |
| BRADO3996 | 1 | 10 | -0.181728 | peptidyl-prolyl cis-trans isomerase A | |
| BRADO3997 | 1 | 9 | -0.274673 | phosphopantetheine adenylyltransferase | |
| BRADO3998 | 1 | 9 | -0.256757 | hypothetical protein | |
| BRADO3999 | 0 | 8 | -0.362536 | DNA gyrase subunit A | |
| BRADO4000 | 4 | 11 | -0.356870 | OprD regulatory protein | |
| BRADO4001 | 6 | 14 | -0.588827 | aldo/keto reductase | |
| BRADO4002 | 10 | 16 | -0.250239 | single-stranded DNA-binding protein | |
| BRADO4003 | 7 | 14 | -0.219919 | outer-membrane protein | |
| BRADO4004 | 6 | 11 | -0.217585 | outer-membrane protein | |
| BRADO4005 | 2 | 13 | -0.324432 | outer-membrane protein | |
| BRADO4006 | 2 | 14 | -0.017630 | outer-membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3997 | LPSBIOSNTHSS | 161 | 1e-53 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4003 | OMPADOMAIN | 34 | 6e-04 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4004 | FLGBIOSNFLIP | 31 | 0.004 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4005 | OMPADOMAIN | 33 | 0.001 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4006 | OMPADOMAIN | 40 | 6e-06 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 34 | BRADO4018 | BRADO4023 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4018 | 2 | 12 | -0.066650 | signal peptide | |
| BRADO4019 | 3 | 13 | -0.067369 | hypothetical protein | |
| BRADO4020 | 4 | 13 | -0.558494 | hypothetical protein | |
| BRADO4021 | 4 | 13 | -1.448440 | hypothetical protein | |
| BRADO4022 | 2 | 13 | -2.039614 | hypothetical protein | |
| BRADO4023 | 2 | 11 | -1.189409 | transglycosylase |
| 35 | BRADO4044 | BRADO4050 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4044 | 2 | 10 | 0.093381 | seryl-tRNA synthetase | |
| BRADO4045 | 2 | 12 | 0.215736 | Sec-independent protein translocase TatC | |
| BRADO4046 | 3 | 15 | 1.061697 | sec-independent protein secretion pathway | |
| BRADO4047 | 2 | 14 | 0.072207 | twin-arginine translocation protein TatA | |
| BRADO4048 | 2 | 13 | 0.368033 | hypothetical protein | |
| BRADO4049 | 2 | 14 | 0.120430 | hypothetical protein | |
| BRADO4050 | 2 | 15 | 0.025491 | sugar hydrolase/beta-N-acetylhexosaminidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4046 | TATBPROTEIN | 68 | 9e-17 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| 36 | BRADO4127 | BRADO4132 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4127 | 2 | 9 | -0.106840 | lipid-A-disaccharide synthase | |
| BRADO4128 | 4 | 10 | -1.181653 | hypothetical protein | |
| BRADO4129 | 4 | 10 | -1.232474 | UDP-N-acetylglucosamine acyltransferase | |
| BRADO4130 | 3 | 8 | -0.661703 | (3R)-hydroxymyristoyl-ACP dehydratase | |
| BRADO4131 | 3 | 8 | -0.168392 | UDP-3-O-[3-hydroxymyristoyl] glucosamine | |
| BRADO4132 | 3 | 9 | -0.190449 | hypothetical protein |
| 37 | BRADO4184 | BRADO4204 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4184 | 2 | 11 | -2.978359 | NADH dehydrogenase subunit C | |
| BRADO4185 | -1 | 12 | -1.178803 | NADH dehydrogenase subunit B | |
| BRADO4186 | -1 | 13 | -0.567335 | NADH dehydrogenase subunit A | |
| BRADO4187 | -1 | 13 | 0.539991 | hypothetical protein | |
| BRADO4188 | 0 | 9 | 0.794638 | signal peptide | |
| BRADO4189 | 1 | 12 | 0.801149 | *peptidase T | |
| BRADO4190 | 1 | 17 | 1.140307 | S-adenosyl-L-methionine (SAM)-dependent | |
| BRADO4191 | 0 | 12 | -1.256670 | hypothetical protein | |
| BRADO4192 | 3 | 11 | -2.230143 | hypothetical protein | |
| BRADO4193 | 3 | 11 | -2.550856 | hypothetical protein | |
| BRADO4194 | 4 | 12 | -3.019137 | cyclic nucleotide binding protein | |
| BRADO4195 | 7 | 15 | -2.904891 | hypothetical protein | |
| BRADO4196 | 4 | 12 | -1.267071 | *ATP-dependent protease La | |
| BRADO4197 | 2 | 12 | -0.194675 | ATP-dependent protease ATP-binding subunit ClpX | |
| BRADO4198 | -1 | 9 | 1.609421 | ATP-dependent Clp protease proteolytic subunit | |
| BRADO4199 | 0 | 9 | 1.715648 | hypothetical protein | |
| BRADO4200 | 0 | 12 | 0.925925 | trigger factor | |
| BRADO4201 | -2 | 10 | 1.317149 | *multicopper oxidase | |
| BRADO4202 | -2 | 11 | -0.031555 | mandelate racemase | |
| BRADO4203 | 0 | 12 | -0.431102 | hypothetical protein | |
| BRADO4204 | 2 | 17 | -2.244546 | nitrogen regulatory protein P-II |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4187 | BACINVASINB | 25 | 0.049 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4195 | SECFTRNLCASE | 24 | 0.049 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4196 | PF02370 | 36 | 3e-04 | M protein repeat | |
>PF02370#M protein repeat | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4200 | INFPOTNTIATR | 30 | 0.017 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| 38 | BRADO4290 | BRADO4300 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4290 | 0 | 23 | -3.039219 | hypothetical protein | |
| BRADO4291 | 0 | 22 | -3.297830 | hypothetical protein | |
| BRADO4292 | 0 | 25 | -3.968576 | alpha-ketoglutarate-dependent taurine | |
| BRADO4293 | 2 | 37 | -5.566583 | hypothetical protein | |
| BRADO4296 | 1 | 38 | -5.722164 | insertion element (IS) transposase | |
| BRADO4297 | 2 | 35 | -6.164771 | acyltransferase | |
| BRADO4298 | 1 | 35 | -6.105066 | hypothetical protein | |
| BRADO4299 | 2 | 32 | -5.110532 | hypothetical protein | |
| BRADO4300 | 1 | 29 | -4.040786 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4300 | PF05272 | 25 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 39 | BRADO4325 | BRADO4347 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4325 | 3 | 14 | 0.234180 | alpha/beta hydrolase | |
| BRADO4326 | 2 | 12 | 0.280699 | hypothetical protein | |
| BRADO4327 | 1 | 10 | 1.205122 | hypothetical protein | |
| BRADO4328 | 2 | 12 | 0.720869 | hypothetical protein | |
| BRADO4329 | 1 | 10 | 0.852770 | hypothetical protein | |
| BRADO4330 | 2 | 10 | 0.517872 | hypothetical protein | |
| BRADO4331 | 0 | 10 | 0.687974 | propionyl-CoA carboxylase subunit beta | |
| BRADO4332 | -1 | 10 | 1.209891 | hypothetical protein | |
| BRADO4333 | -1 | 10 | 0.464859 | hypothetical protein | |
| BRADO4334 | -2 | 10 | 1.074880 | RNA polymerase sigma subunit | |
| BRADO4335 | -1 | 11 | 0.946495 | dehydrogenase/oxidoreductase | |
| BRADO4336 | 0 | 12 | 0.569940 | peptidase | |
| BRADO4337 | 2 | 11 | 1.450872 | ribose ABC transporter | |
| BRADO4338 | 2 | 10 | 1.533305 | hypothetical protein | |
| BRADO4339 | 0 | 9 | 1.068532 | ribonucleotide reductase | |
| BRADO4340 | -2 | 8 | -0.207108 | cytidine/deoxycytidylate deaminase | |
| BRADO4341 | -1 | 9 | -0.728302 | hypothetical protein | |
| BRADO4343 | -2 | 9 | -1.040343 | sigma-54-dependent transcriptional regulator | |
| BRADO4344 | -2 | 10 | -2.723062 | molecular chaperone GroEL | |
| BRADO4345 | 1 | 11 | -4.062867 | hypothetical protein | |
| BRADO4346 | 1 | 11 | -4.090141 | amidohydrolase | |
| BRADO4347 | -1 | 12 | -3.074715 | methane/phenol/toluene monooxygenase subunit B |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4335 | DHBDHDRGNASE | 43 | 4e-07 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4338 | PREPILNPTASE | 26 | 0.036 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4343 | HTHFIS | 263 | 6e-83 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 40 | BRADO4405 | BRADO4415 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4405 | 2 | 19 | -2.260081 | dipeptide ABC transporter permease | |
| BRADO4406 | 2 | 23 | -3.849372 | HTH-type transcriptional regulator | |
| BRADO4407 | 2 | 25 | -3.643157 | amidase | |
| BRADO4408 | 3 | 25 | -4.077844 | amidotransferase/amidase | |
| BRADO4409 | 3 | 24 | -3.838957 | alpha/beta hydrolase | |
| BRADO4410 | 2 | 21 | -3.303533 | regulator (HTH, AraC-type) | |
| BRADO4411 | 1 | 16 | -2.352005 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BRADO4412 | 2 | 11 | -0.172798 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BRADO4415 | 2 | 10 | 0.395898 | *MerR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4411 | ACRIFLAVINRP | 970 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4412 | RTXTOXIND | 49 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 41 | BRADO4473 | BRADO4479 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4473 | 2 | 11 | -0.992770 | SsrA-binding protein | |
| BRADO4474 | 4 | 13 | -1.310280 | large-conductance mechanosensitive channel | |
| BRADO4475 | 5 | 13 | -0.972491 | dihydrodipicolinate synthase | |
| BRADO4476 | 4 | 15 | -0.753252 | lytic transglycosylase | |
| BRADO4477 | 9 | 20 | -2.320448 | hypothetical protein | |
| BRADO4478 | 4 | 16 | -1.933827 | porin | |
| BRADO4479 | 2 | 15 | -1.591297 | porin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4474 | MECHCHANNEL | 148 | 3e-49 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4475 | CARBMTKINASE | 28 | 0.035 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4476 | ACETATEKNASE | 30 | 0.048 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4479 | PF03627 | 30 | 0.021 | PapG | |
>PF03627#PapG | |||||
| 42 | BRADO4574 | BRADO4584 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4574 | 2 | 11 | 2.521343 | nucleoside-diphosphate-sugar epimerase | |
| BRADO4575 | 3 | 12 | 2.054212 | LysR family transcriptional regulator | |
| BRADO4576 | 2 | 11 | 1.142038 | hypothetical protein | |
| BRADO4577 | 2 | 11 | 1.066211 | ethanolamine ammonia-lyase heavy chain | |
| BRADO4578 | 1 | 11 | 0.949217 | ethanolamine ammonia-lyase light chain | |
| BRADO4579 | 1 | 9 | 0.367651 | branched-chain amino acid ABC transporter | |
| BRADO4580 | 1 | 9 | 0.141584 | branched-chain amino acid ABC transporter | |
| BRADO4581 | 3 | 10 | 0.365623 | branched-chain amino acid ABC transporter | |
| BRADO4582 | 2 | 10 | -0.027581 | branched-chain amino acid ABC transporter | |
| BRADO4583 | 2 | 10 | -0.083850 | branched-chain amino acid ABC transporter | |
| BRADO4584 | 3 | 13 | -0.213420 | carbon-monoxide dehydrogenase large subunit, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4574 | NUCEPIMERASE | 33 | 0.002 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4580 | PF05272 | 28 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 43 | BRADO4596 | BRADO4612 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4596 | 4 | 19 | -0.041743 | carboxymuconolactone decarboxylase | |
| BRADO4598 | 6 | 23 | -0.560333 | hypothetical protein | |
| BRADO4599 | 4 | 24 | -0.485650 | dipeptide ABC transporter ATP-binding protein | |
| BRADO4600 | 2 | 28 | -0.203666 | hypothetical protein | |
| BRADO4601 | 1 | 25 | 0.176795 | dipeptide ABC transporter permease (fragment) | |
| BRADO4602 | 0 | 20 | 0.119279 | dipeptide ABC transporter permease (fragment) | |
| BRADO4603 | 1 | 20 | -0.139678 | dipeptide ABC transporter permease (fragment) | |
| BRADO4604 | 1 | 17 | 1.059525 | hypothetical protein | |
| BRADO4606 | 1 | 16 | 1.088959 | dipeptide ABC transporter (fragment), | |
| BRADO4608 | 3 | 14 | 1.059717 | transcriptional regulator (fragment) | |
| BRADO4609 | 3 | 14 | 1.225862 | dihydroxyacetone kinase subunit DhaK | |
| BRADO4610 | 3 | 14 | 0.972300 | hypothetical protein | |
| BRADO4611 | 2 | 14 | 0.737932 | phosphotransferase system enzyme I | |
| BRADO4612 | 2 | 15 | -0.552010 | sugar transport PTS system phosphocarrier |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4606 | FIMBRILLIN | 30 | 0.009 | Porphyromonas gingivalis: fimbrillin protein signature. | |
>FIMBRILLIN#Porphyromonas gingivalis: fimbrillin protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4611 | PHPHTRNFRASE | 448 | e-155 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 44 | BRADO4745 | BRADO4754 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4745 | -2 | 22 | -3.426799 | tRNA-dihydrouridine synthase A | |
| BRADO4747 | -1 | 23 | -4.315591 | hypothetical protein | |
| BRADO4748 | -1 | 23 | -3.990889 | hypothetical protein | |
| BRADO4749 | -2 | 24 | -3.973606 | hypothetical protein | |
| BRADO4750 | -1 | 23 | -3.790771 | hypothetical protein | |
| BRADO4751 | -1 | 24 | -3.530013 | hypothetical protein | |
| BRADO4752 | -1 | 22 | -3.245701 | glycosidase | |
| BRADO4753 | -1 | 23 | -2.759637 | succinoglycan biosynthesis protein ExoA | |
| BRADO4754 | 0 | 22 | -3.466687 | hypothetical protein |
| 45 | BRADO4775 | BRADO4780 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4775 | 3 | 11 | 1.758952 | oxidoreductase subunit aerobic-type carbon | |
| BRADO4776 | 5 | 10 | 1.756412 | oxidoreductase iron-sulfur-binding protein | |
| BRADO4777 | 4 | 9 | 1.792927 | oxidoreductase subunit carbon-monoxide | |
| BRADO4778 | 4 | 9 | 1.471383 | hypothetical protein | |
| BRADO4779 | 3 | 8 | 1.232410 | hypothetical protein | |
| BRADO4780 | 4 | 8 | 0.971564 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4775 | TONBPROTEIN | 30 | 0.017 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4780 | IGASERPTASE | 47 | 5e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 46 | BRADO4789 | BRADO4803 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4789 | 3 | 9 | 0.671512 | sugar ABC transporter ATP-binding protein ribose | |
| BRADO4790 | 3 | 9 | 1.092156 | sugar ABC transporter permease ribose ABC | |
| BRADO4791 | 3 | 9 | 1.238295 | sugar ABC transporter permease ribose ABC | |
| BRADO4792 | 1 | 11 | 1.520383 | glycerol-3-phosphate dehydrogenase | |
| BRADO4793 | 1 | 13 | 0.848205 | L-fuculose phosphate aldolase | |
| BRADO4794 | 2 | 14 | 0.600295 | D-3-phosphoglycerate dehydrogenase | |
| BRADO4795 | -1 | 11 | -0.398576 | carbohydrate kinase | |
| BRADO4796 | -1 | 12 | -0.727789 | sugar ABC transporter ATP-binding protein | |
| BRADO4797 | -1 | 9 | 0.117477 | sugar ABC transporter ATP-binding protein | |
| BRADO4798 | -1 | 9 | 0.023801 | sugar ABC transporter permease | |
| BRADO4799 | -1 | 9 | 1.469727 | sugar ABC transporter permease | |
| BRADO4800 | -2 | 9 | 2.045367 | sugar ABC transporter substrate-binding protein | |
| BRADO4801 | 1 | 12 | 2.980338 | EryD-like transcriptional regulator | |
| BRADO4802 | 3 | 11 | 3.042835 | carbohydrate kinase | |
| BRADO4803 | 3 | 11 | 1.932506 | hypothetical protein |
| 47 | BRADO4872 | BRADO4906 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4872 | 2 | 13 | 2.014254 | NADH dehydrogenase/NAD(P)H nitroreductase | |
| BRADO4873 | 2 | 11 | -0.778487 | O-acetylhomoserine | |
| BRADO4874 | 2 | 17 | -0.577523 | alpha/beta hydrolase | |
| BRADO4875 | 1 | 18 | -1.425821 | cell wall or antigenic protein (fragment) signal | |
| BRADO4876 | 0 | 16 | -2.581108 | signal peptide | |
| BRADO4877 | 0 | 17 | -2.780941 | signal peptide | |
| BRADO4878 | -1 | 17 | -2.737763 | cytochrome o ubiquinol oxidase subunit I | |
| BRADO4879 | 0 | 18 | -2.285680 | Short-chain dehydrogenase/reductase (modular) | |
| BRADO4880 | 4 | 16 | -3.529667 | flagellar hook-associated protein FlgL | |
| BRADO4881 | 5 | 17 | -3.257478 | flagellar hook-associated protein 1 FlgK | |
| BRADO4882 | 4 | 15 | -2.374220 | flagellar basal-body protein flbY | |
| BRADO4883 | 3 | 18 | -2.301106 | hypothetical protein | |
| BRADO4884 | 4 | 12 | -3.225313 | flagellar hook protein FlgE | |
| BRADO4885 | 6 | 12 | -2.581012 | basal-body rod modification protein flgD | |
| BRADO4886 | 5 | 11 | -1.785003 | hypothetical protein | |
| BRADO4887 | 2 | 11 | -1.263383 | hypothetical protein | |
| BRADO4888 | 2 | 10 | -1.447120 | flagellar protein fliS | |
| BRADO4889 | 2 | 10 | -1.168057 | flagellar hook-associated protein FlgD | |
| BRADO4890 | 0 | 12 | 0.613412 | flagellin | |
| BRADO4891 | -1 | 13 | 1.511707 | RNA polymerase sigma factor | |
| BRADO4894 | 0 | 14 | 1.880197 | hypothetical protein | |
| BRADO4895 | 1 | 16 | 2.373731 | methionyl-tRNA formyltransferase | |
| BRADO4896 | 1 | 16 | 2.957857 | cob(ii)yrinic acid a,c-diamide reductase | |
| BRADO4897 | 2 | 16 | 3.060703 | cobyrinic acid a,c-diamide synthase | |
| BRADO4898 | 3 | 16 | 3.187049 | cobalt-precorrin-6A synthase | |
| BRADO4899 | 4 | 18 | 2.639227 | precorrin-4 C11-methyltransferase | |
| BRADO4900 | 5 | 18 | 2.654663 | CobE protein | |
| BRADO4901 | 4 | 17 | 2.429552 | precorrin-6Y C(5,15)-methyltransferase | |
| BRADO4902 | 5 | 16 | 2.611850 | precorrin-6A reductase | |
| BRADO4903 | 4 | 15 | 2.289040 | precorrin-3B C17-methyltransferase | |
| BRADO4904 | 3 | 14 | 2.135523 | precorrin-2 C20-methyltransferase | |
| BRADO4905 | 3 | 15 | 2.284413 | precorrin-8X methylmutase | |
| BRADO4906 | 2 | 15 | 2.239552 | precorrin-3B synthase (cobG) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4875 | cloacin | 34 | 7e-05 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4879 | DHBDHDRGNASE | 73 | 1e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4881 | FLGHOOKAP1 | 110 | 9e-28 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4884 | FLGHOOKAP1 | 37 | 1e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4890 | FLAGELLIN | 86 | 4e-21 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 48 | BRADO4925 | BRADO4935 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4925 | 2 | 23 | -2.416999 | hypothetical protein | |
| BRADO4926 | 2 | 33 | -4.163486 | hypothetical protein | |
| BRADO4927 | 3 | 40 | -5.245677 | signal peptide | |
| BRADO4930 | 7 | 45 | -7.152317 | hypothetical protein | |
| BRADO4932 | 6 | 32 | -3.589363 | hypothetical protein | |
| BRADO4934 | 4 | 30 | -2.909961 | hypothetical protein | |
| BRADO4935 | 2 | 26 | -2.311895 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4927 | RTXTOXINA | 29 | 0.006 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 49 | BRADO4998 | BRADO5005 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4998 | 2 | 16 | 1.750576 | acyl-CoA N-acyltransferase | |
| BRADO4999 | -1 | 17 | 1.468783 | DSBA oxidoreductase | |
| BRADO5000 | 3 | 16 | 0.265360 | XRE family transcriptional regulator | |
| BRADO5001 | 6 | 14 | 0.396929 | hypothetical protein | |
| BRADO5002 | 5 | 12 | 1.383110 | hypothetical protein | |
| BRADO5003 | 3 | 10 | 1.360572 | hypothetical protein | |
| BRADO5004 | 2 | 10 | 0.861327 | S-adenosyl-L-methionine (SAM)-dependent | |
| BRADO5005 | 2 | 10 | 0.388966 | histone-lysine N-methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5005 | IGASERPTASE | 33 | 8e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 50 | BRADO5024 | BRADO5032 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5024 | 2 | 13 | -2.154529 | flagellar biosynthesis protein FlhB | |
| BRADO5025 | 0 | 10 | 1.303816 | flagellar biosynthesis protein FliR | |
| BRADO5026 | 1 | 13 | 1.701321 | flagellar biosynthesis protein FliQ | |
| BRADO5027 | 0 | 12 | 2.501649 | flagellar hook-basal body protein FliE | |
| BRADO5028 | 2 | 12 | 2.303955 | flagellar basal body rod protein FlgC | |
| BRADO5029 | 2 | 12 | 2.690976 | flagellar basal-body rod protein FlgB | |
| BRADO5030 | 2 | 12 | 2.377261 | hypothetical protein | |
| BRADO5031 | 2 | 11 | 0.942892 | flagellar biosynthesis protein FliP | |
| BRADO5032 | 2 | 11 | 0.898556 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5024 | TYPE3IMSPROT | 318 | e-109 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5025 | TYPE3IMRPROT | 124 | 1e-36 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5026 | TYPE3IMQPROT | 59 | 1e-15 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5027 | FLGHOOKFLIE | 47 | 3e-10 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5028 | FLGHOOKAP1 | 30 | 0.004 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5030 | IGASERPTASE | 58 | 2e-11 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5031 | FLGBIOSNFLIP | 269 | 8e-94 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5032 | IGASERPTASE | 42 | 2e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 51 | BRADO5050 | BRADO5064 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5050 | 3 | 10 | -1.628225 | flagellar basal body P-ring biosynthesis protein | |
| BRADO5051 | 6 | 14 | -2.030815 | chemotactic signal-response protein CheL | |
| BRADO5052 | 5 | 14 | -2.110031 | hypothetical protein | |
| BRADO5053 | 7 | 17 | -2.122416 | hypothetical protein | |
| BRADO5054 | 5 | 13 | -1.036882 | flagellar biosynthesis regulatory protein FlaF | |
| BRADO5055 | 5 | 13 | -0.544020 | flagellin protein, C-terminus | |
| BRADO5056 | 3 | 12 | 0.732521 | flagellin protein, C-terminus | |
| BRADO5057 | 2 | 11 | 0.951689 | flagellar biosynthesis repressor FlbT | |
| BRADO5058 | 2 | 10 | 1.103173 | flagellin protein, C-terminus | |
| BRADO5059 | 1 | 10 | 1.094603 | pyridoxal-dependent decarboxylase | |
| BRADO5060 | 2 | 11 | 0.234180 | hypothetical protein | |
| BRADO5061 | 2 | 11 | 0.303835 | hypothetical protein | |
| BRADO5062 | 2 | 13 | 0.672841 | hypothetical protein | |
| BRADO5063 | 2 | 13 | 0.889292 | flagellin and related hook-associated protein | |
| BRADO5064 | 3 | 12 | 0.798743 | flagellar hook-associated protein FlgK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5050 | FLGPRINGFLGI | 396 | e-139 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5051 | FLGFLGJ | 35 | 7e-05 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5055 | FLAGELLIN | 56 | 2e-10 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5056 | FLAGELLIN | 60 | 1e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5058 | FLAGELLIN | 59 | 2e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5064 | FLGHOOKAP1 | 110 | 2e-27 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 52 | BRADO5078 | BRADO5083 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5078 | 5 | 15 | 1.814844 | signal peptide | |
| BRADO5079 | 5 | 15 | 1.857424 | thioredoxin reductase | |
| BRADO5080 | 5 | 14 | 2.189692 | thioesterase | |
| BRADO5081 | 4 | 14 | 1.939730 | 2Fe-2S ferredoxin | |
| BRADO5082 | 3 | 12 | 2.228394 | hypothetical protein | |
| BRADO5083 | 2 | 11 | 1.984000 | methyl-accepting chemotaxis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5083 | IGASERPTASE | 40 | 1e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 53 | BRADO5097 | BRADO5109 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5097 | 4 | 14 | 2.961012 | hypothetical protein | |
| BRADO5098 | 4 | 14 | 2.905778 | signal peptide | |
| BRADO5099 | 6 | 15 | 3.304528 | hypothetical protein | |
| BRADO5100 | 4 | 15 | 4.050315 | two-component sensor histidine kinase | |
| BRADO5101 | 1 | 16 | 2.740871 | two-component transcriptional regulator | |
| BRADO5102 | 0 | 18 | 2.891305 | signal peptide | |
| BRADO5103 | -1 | 17 | 2.419862 | hypothetical protein | |
| BRADO5104 | 0 | 12 | 3.968732 | hypothetical protein | |
| BRADO5105 | 2 | 11 | 4.281257 | transport transmembrane protein | |
| BRADO5106 | 3 | 11 | 3.333287 | arsenate reductase subunit ArsC-like protein | |
| BRADO5107 | 4 | 11 | 3.309864 | ArsR family transcriptional regulator | |
| BRADO5108 | 3 | 10 | 3.186629 | ArsR family transcriptional regulator | |
| BRADO5109 | 2 | 10 | 3.095101 | pyridine nucleotide-disulfide oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5100 | PF06580 | 31 | 0.009 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5101 | HTHFIS | 94 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 54 | BRADO5153 | BRADO5162 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5153 | 0 | 22 | -3.953527 | nucleotide sugar epimerase capsular | |
| BRADO5154 | 0 | 24 | -4.598076 | UDP-glucose/GDP-mannose dehydrogenase | |
| BRADO5155 | 1 | 26 | -5.189334 | hypothetical protein | |
| BRADO5156 | 1 | 28 | -5.907908 | asparagine synthetase | |
| BRADO5157 | 2 | 29 | -6.994971 | acyltransferase | |
| BRADO5158 | 1 | 21 | -5.768705 | hypothetical protein | |
| BRADO5159 | 0 | 19 | -5.055292 | acyltransferase | |
| BRADO5160 | -1 | 14 | -4.624123 | hypothetical protein | |
| BRADO5161 | -1 | 12 | -4.230794 | membrane bound O-acyl transferase (MBOAT) family | |
| BRADO5162 | -1 | 11 | -3.069996 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5153 | NUCEPIMERASE | 528 | 0.0 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 55 | BRADO5179 | BRADO5193 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5179 | 1 | 18 | -3.670032 | S-adenosyl-L-methionine (SAM)-dependent | |
| BRADO5180 | 1 | 21 | -4.069518 | O-antigene/LPS export system permease | |
| BRADO5181 | 4 | 24 | -4.261627 | O-antigen/LPS export system ATP-binding protein | |
| BRADO5182 | 4 | 27 | -4.819388 | glycosyl transferase family protein | |
| BRADO5183 | 4 | 30 | -6.141776 | hypothetical protein | |
| BRADO5185 | 5 | 38 | -8.234988 | hypothetical protein | |
| BRADO5186 | 4 | 38 | -7.014857 | acetyltransferase/trimeric LpxA-like enzyme | |
| BRADO5187 | 4 | 38 | -7.460666 | DegT/DnrJ/EryC1/StrS aminotransferase | |
| BRADO5188 | 4 | 38 | -7.741766 | sulfotransferase | |
| BRADO5189 | 4 | 39 | -7.823158 | NAD(P)-dependent oxidoreductase | |
| BRADO5190 | 4 | 41 | -7.522161 | NAD dependent epimerase/dehydratase | |
| BRADO5191 | 4 | 42 | -7.758828 | DegT/DnrJ/EryC1/StrS aminotransferase | |
| BRADO5192 | 2 | 35 | -5.934280 | sulfate adenylyltransferase subunit 2 | |
| BRADO5193 | 1 | 30 | -4.204645 | bifunctional sulfate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5190 | NUCEPIMERASE | 220 | 6e-72 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5193 | TCRTETOQM | 54 | 1e-09 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 56 | BRADO5290 | BRADO5314 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5290 | -1 | 18 | -4.622632 | hypothetical protein | |
| BRADO5292 | 0 | 18 | -4.869715 | dimethyl sulfoxide reductase(DMSO reductase) | |
| BRADO5294 | 0 | 20 | -5.691712 | GntR family transcriptional regulator | |
| BRADO5295 | 1 | 20 | -5.895541 | TRAP dicarboxylate family transporter subunit | |
| BRADO5296 | 1 | 24 | -5.100018 | TRAP C4-dicarboxylate transport system subunit | |
| BRADO5297 | 3 | 25 | -4.869914 | TRAP-type C4-dicarboxylate transport system, | |
| BRADO5298 | 3 | 29 | -4.639463 | transcriptional regulator | |
| BRADO5299 | 2 | 31 | -4.613911 | transcriptional regulator | |
| BRADO5301 | 2 | 31 | -4.421935 | cytochrome c | |
| BRADO5302 | 1 | 29 | -4.097825 | ABC transporter substrate-binding protein | |
| BRADO5303 | 0 | 31 | -4.032699 | ABC transporter ATP-binding protein | |
| BRADO5304 | -1 | 31 | -4.493047 | ABC transporter permease | |
| BRADO5305 | 0 | 31 | -4.668747 | hypothetical protein | |
| BRADO5306 | 0 | 30 | -4.734594 | hypothetical protein | |
| BRADO5307 | 1 | 29 | -4.735522 | hypothetical protein | |
| BRADO5308 | 0 | 28 | -4.681434 | alcohol dehydrogenase | |
| BRADO5309 | 1 | 27 | -4.885610 | nucleotide-binding | |
| BRADO5310 | 1 | 24 | -4.373363 | poly-beta-hydroxybutyrate polymerase | |
| BRADO5311 | 0 | 23 | -3.600796 | hypothetical protein | |
| BRADO5312 | 1 | 21 | -2.970334 | hypothetical protein | |
| BRADO5313 | -2 | 23 | -2.867105 | Formyl-coenzyme A transferase | |
| BRADO5314 | 2 | 20 | -2.315986 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5296 | ACRIFLAVINRP | 29 | 0.009 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5307 | SACTRNSFRASE | 35 | 8e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5312 | ISCHRISMTASE | 29 | 0.014 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5314 | SACTRNSFRASE | 27 | 0.030 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 57 | BRADO5324 | BRADO5350 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5324 | 2 | 24 | -3.379295 | hypothetical protein | |
| BRADO5325 | 1 | 23 | -4.025141 | hypothetical protein | |
| BRADO5326 | 2 | 34 | -5.135156 | hypothetical protein | |
| BRADO5327 | 2 | 32 | -4.916946 | hypothetical protein | |
| BRADO5328 | 0 | 28 | -4.622917 | cytochrome c-552 (cytochrome c552) | |
| BRADO5329 | -1 | 21 | -3.370828 | hypothetical protein | |
| BRADO5330 | -1 | 13 | -2.202356 | hypothetical protein | |
| BRADO5331 | 1 | 13 | -2.169871 | hypothetical protein | |
| BRADO5332 | 1 | 12 | -1.503504 | hypothetical protein | |
| BRADO5333 | 0 | 12 | -0.820914 | hypothetical protein | |
| BRADO5334 | 0 | 9 | -0.423091 | hypothetical protein | |
| BRADO5335 | 1 | 10 | -0.330115 | protective surface antigen | |
| BRADO5336 | 2 | 15 | -0.034722 | signal peptide | |
| BRADO5338 | 0 | 16 | -0.093493 | hypothetical protein | |
| BRADO5339 | 0 | 15 | -0.351982 | hypothetical protein | |
| BRADO5340 | 0 | 14 | -1.591448 | LexA repressor | |
| BRADO5341 | -1 | 15 | -1.713625 | hypothetical protein | |
| BRADO5342 | -1 | 15 | -1.726555 | quinone oxidoreductase | |
| BRADO5343 | 3 | 21 | -1.543343 | hypothetical protein | |
| BRADO5344 | 3 | 17 | -0.441921 | quaternary ammonium compound-resistance protein | |
| BRADO5345 | 4 | 15 | 0.023195 | hypothetical protein | |
| BRADO5347 | 6 | 13 | 0.636539 | hypothetical protein | |
| BRADO5348 | 4 | 13 | 0.040615 | hypothetical protein | |
| BRADO5349 | 2 | 14 | 0.351240 | ATP-binding component, PhnN protein | |
| BRADO5350 | 2 | 15 | 0.672868 | metal-dependent hydrolase involved in |
| 58 | BRADO5475 | BRADO5483 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5475 | 3 | 17 | -3.778498 | hypothetical protein | |
| BRADO5476 | 3 | 16 | -3.516804 | hypothetical protein | |
| BRADO5477 | 1 | 17 | -3.100324 | ethD like-protein | |
| BRADO5478 | -1 | 16 | -3.237029 | coenzyme PQQ synthesis protein PqqA | |
| BRADO5479 | 1 | 13 | -3.089239 | hypothetical protein | |
| BRADO5480 | 2 | 12 | -3.172603 | quinoprotein ethanol dehydrogenase | |
| BRADO5481 | 1 | 11 | -2.867105 | cytochrome c like protein | |
| BRADO5482 | 1 | 10 | -2.773059 | ABC transporter substrate-binding protein | |
| BRADO5483 | 2 | 11 | -2.957156 | AraC family transcriptional regulator |
| 59 | BRADO5497 | BRADO5502 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5497 | 2 | 11 | 0.801350 | cyclase | |
| BRADO5498 | 4 | 10 | 1.567181 | fumarylacetoacetate hydrolase | |
| BRADO5499 | 4 | 9 | 2.314034 | ABC transporter substrate-binding protein | |
| BRADO5500 | 5 | 12 | 2.705267 | GntR family transcriptional regulator | |
| BRADO5501 | 4 | 12 | 2.838302 | ABC transporter ATP-binding protein | |
| BRADO5502 | 2 | 11 | 2.328142 | ABC transporter permease |
| 60 | BRADO5517 | BRADO5533 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5517 | 1 | 28 | -6.350140 | 3-isopropylmalate dehydratase small subunit | |
| BRADO5518 | 1 | 27 | -5.996322 | hypothetical protein | |
| BRADO5519 | 0 | 22 | -5.561704 | hypothetical protein | |
| BRADO5521 | 0 | 20 | -5.513753 | M20/M25/M40 family peptidase | |
| BRADO5522 | 0 | 17 | -5.829028 | hypothetical protein | |
| BRADO5523 | 0 | 12 | -4.989047 | hypothetical protein | |
| BRADO5524 | 0 | 17 | -1.595308 | *signal peptide | |
| BRADO5525 | 0 | 12 | -2.529282 | TRAP C4-dicarboxylate transport system permease | |
| BRADO5526 | 0 | 11 | -1.577926 | TRAP C4-dicarboxylate transport system subunit | |
| BRADO5527 | -1 | 10 | -1.264424 | TRAP dicarboxylate family transporter subunit | |
| BRADO5528 | -1 | 9 | -0.876244 | 2-isopropylmalate synthase | |
| BRADO5529 | 0 | 17 | -0.746326 | hypothetical protein | |
| BRADO5530 | 1 | 14 | -0.417630 | transposase | |
| BRADO5531 | 2 | 13 | 0.804160 | alpha/beta hydrolase | |
| BRADO5532 | 0 | 11 | 0.430791 | beta-lactamase | |
| BRADO5533 | 2 | 12 | 1.279948 | hypothetical protein |
| 61 | BRADO5678 | BRADO5683 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5678 | 2 | 12 | 3.121360 | hypothetical protein | |
| BRADO5679 | 2 | 13 | 3.779998 | extensin | |
| BRADO5680 | 2 | 13 | 3.392688 | hypothetical protein | |
| BRADO5681 | 2 | 13 | 3.188392 | hypothetical protein | |
| BRADO5682 | 2 | 12 | 2.928280 | two component sensor histidine kinase | |
| BRADO5683 | 2 | 11 | 2.270522 | OmpR family two component response |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5681 | PF03544 | 33 | 0.001 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5682 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5683 | HTHFIS | 83 | 3e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 62 | BRADO5725 | BRADO5734 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5725 | 2 | 13 | 0.981492 | hypothetical protein | |
| BRADO5726 | 1 | 11 | 0.307471 | hypothetical protein | |
| BRADO5727 | 1 | 10 | 0.098490 | hypothetical protein | |
| BRADO5728 | 0 | 10 | 0.053504 | cation efflux membrane fusion protein | |
| BRADO5729 | -1 | 10 | -0.341621 | cation efflux system protein | |
| BRADO5730 | 2 | 17 | -1.185022 | hypothetical protein | |
| BRADO5731 | 4 | 15 | -0.357180 | bacterioferritin | |
| BRADO5732 | 3 | 17 | 0.195559 | bacterioferritin-associated ferredoxin | |
| BRADO5733 | 2 | 16 | -0.662758 | glycine-rich cell wall protein | |
| BRADO5734 | 2 | 13 | -0.880927 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5728 | RTXTOXIND | 45 | 3e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5729 | ACRIFLAVINRP | 691 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5731 | HELNAPAPROT | 28 | 0.016 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5733 | CHANLCOLICIN | 26 | 0.028 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5734 | OMPADOMAIN | 30 | 0.002 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 63 | BRADO5858 | BRADO5871 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5858 | 3 | 10 | 2.621439 | hypothetical protein | |
| BRADO5859 | 3 | 9 | 2.473811 | cbbQ/nirQ/norQ/gpvN family protein | |
| BRADO5860 | 2 | 9 | 2.802104 | hypothetical protein | |
| BRADO5861 | 3 | 10 | 1.834108 | urease accessory protein ureD | |
| BRADO5862 | 0 | 9 | 0.445240 | urease accessory protein UreG | |
| BRADO5863 | 0 | 10 | -0.839893 | urease subunit alpha | |
| BRADO5864 | -1 | 12 | -1.930532 | bifunctional urease subunit gamma/beta | |
| BRADO5865 | 1 | 12 | -2.267421 | urease accessory protein UreF | |
| BRADO5866 | 0 | 11 | -3.134986 | urease accessory protein UreE | |
| BRADO5867 | 0 | 10 | -3.674378 | hypothetical protein | |
| BRADO5868 | 2 | 11 | -3.476278 | hypothetical protein | |
| BRADO5869 | 0 | 11 | -3.773939 | acylamide amidohydrolase | |
| BRADO5870 | -1 | 9 | -3.577546 | branched-chain amino acid ABC transporter | |
| BRADO5871 | -1 | 10 | -3.450377 | branched-chain amino acid ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5859 | HTHFIS | 28 | 0.033 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5863 | UREASE | 876 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 64 | BRADO5913 | BRADO5926 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5913 | 2 | 17 | -0.872605 | aliphatic sulfonate ABC transporter | |
| BRADO5914 | 3 | 20 | -0.605485 | nitrate reductase | |
| BRADO5915 | 2 | 19 | -0.860976 | nitrate reductase | |
| BRADO5916 | 2 | 15 | -1.270402 | nitrate reductase catalytic subunit | |
| BRADO5917 | 1 | 12 | -0.852261 | nitrate reductase small subunit | |
| BRADO5918 | 1 | 10 | -0.073407 | nitrate reductase | |
| BRADO5919 | 1 | 10 | -0.196127 | deoxyribonuclease | |
| BRADO5920 | 1 | 10 | -0.252802 | hypothetical protein | |
| BRADO5921 | 2 | 11 | 0.197231 | transposase | |
| BRADO5922 | 4 | 13 | 1.159665 | hypothetical protein | |
| BRADO5923 | 3 | 13 | 0.822109 | hypothetical protein | |
| BRADO5925 | 2 | 14 | 0.539991 | methionine sulfoxide reductase A | |
| BRADO5926 | 2 | 14 | 1.464889 | methionine sulfoxide reductase B |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5914 | PF04335 | 25 | 0.022 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5921 | IGASERPTASE | 41 | 9e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5923 | SYCDCHAPRONE | 30 | 0.018 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 65 | BRADO5962 | BRADO5967 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5962 | 2 | 12 | 0.387784 | hypothetical protein | |
| BRADO5963 | 3 | 14 | -0.054363 | sulfate transporter | |
| BRADO5964 | 4 | 16 | -0.261428 | hypothetical protein | |
| BRADO5965 | 3 | 14 | 0.002356 | two-component sensor histidine kinase | |
| BRADO5966 | 3 | 14 | 0.207765 | hypothetical protein | |
| BRADO5967 | 3 | 13 | 0.247426 | hemagglutinin-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5965 | PF06580 | 44 | 3e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5967 | PF05860 | 64 | 3e-14 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| 66 | BRADO5997 | BRADO6014 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5997 | 2 | 10 | 1.061231 | hypothetical protein | |
| BRADO5999 | 2 | 10 | 1.007280 | hypothetical protein | |
| BRADO6000 | 3 | 12 | 1.239444 | ribose-phosphate pyrophosphokinase | |
| BRADO6001 | 1 | 12 | 1.636012 | signal peptide | |
| BRADO6002 | -1 | 12 | 0.872848 | hypothetical protein | |
| BRADO6003 | 0 | 12 | 0.627768 | hypothetical protein | |
| BRADO6004 | 1 | 14 | -0.108308 | prolipoprotein diacylglyceryl transferase | |
| BRADO6005 | 3 | 14 | 0.002838 | hypothetical protein | |
| BRADO6006 | 2 | 13 | -0.335716 | 50S ribosomal protein L25 | |
| BRADO6007 | 2 | 13 | -1.229636 | peptidyl-tRNA hydrolase | |
| BRADO6008 | 2 | 15 | -1.586210 | GTP-dependent nucleic acid-binding protein EngD | |
| BRADO6009 | 1 | 23 | -2.279966 | hypothetical protein | |
| BRADO6010 | 1 | 26 | -2.854442 | hypothetical protein | |
| BRADO6011 | 1 | 27 | -3.525050 | hypothetical protein | |
| BRADO6012 | 0 | 27 | -3.914694 | signal peptide | |
| BRADO6013 | -1 | 27 | -3.300427 | hypothetical protein | |
| BRADO6014 | -1 | 25 | -3.009392 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5997 | SECA | 34 | 9e-06 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 67 | BRADO6078 | BRADO6091 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6078 | 2 | 9 | 2.993376 | hypothetical protein | |
| BRADO6079 | 2 | 8 | 3.214540 | DNA mismatch repair protein | |
| BRADO6080 | 2 | 10 | 2.720833 | methyltransferase | |
| BRADO6081 | 3 | 8 | 2.561249 | pseudouridine synthase | |
| BRADO6082 | -1 | 10 | 0.583356 | cytidine and deoxycytidylate deaminase | |
| BRADO6083 | -1 | 9 | 0.217618 | hydrolase | |
| BRADO6084 | -1 | 10 | 0.526032 | cytochrome p450-like enzyme | |
| BRADO6085 | -2 | 10 | -0.271115 | S-adenosyl-L-methionine (SAM)-dependent | |
| BRADO6086 | -1 | 10 | 0.057772 | hypothetical protein | |
| BRADO6087 | 0 | 8 | 1.070294 | adenylate cyclase | |
| BRADO6088 | 0 | 9 | 2.045250 | phosphoribosylamine--glycine ligase | |
| BRADO6089 | 2 | 10 | 2.730914 | transcriptional regulator | |
| BRADO6090 | 0 | 13 | 2.553154 | hypothetical protein | |
| BRADO6091 | 0 | 11 | 3.307923 | alpha/beta hydrolase |
| 68 | BRADO6112 | BRADO6132 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6112 | 3 | 19 | -0.444715 | methyl-accepting chemotaxis protein | |
| BRADO6113 | 1 | 17 | -0.149299 | hypothetical protein | |
| BRADO6114 | 1 | 16 | -0.082386 | co-chaperonin GroES | |
| BRADO6115 | 1 | 17 | -0.275262 | molecular chaperone GroEL | |
| BRADO6116 | 2 | 13 | -0.751034 | signal peptide | |
| BRADO6117 | 0 | 13 | -0.329177 | hypothetical protein | |
| BRADO6118 | 0 | 14 | 0.781731 | LctP family glycolate permease | |
| BRADO6119 | 2 | 13 | 0.825178 | ABC transporter ATP binding protein/permease | |
| BRADO6120 | 5 | 15 | 0.930257 | hypothetical protein | |
| BRADO6121 | 7 | 21 | -2.658774 | hypothetical protein | |
| BRADO6122 | 6 | 27 | -4.673175 | glycolate oxidase iron-sulfur subunit GlcF | |
| BRADO6123 | 11 | 40 | -8.100051 | glycolate oxidase subunit GlcE | |
| BRADO6125 | 8 | 35 | -9.322956 | hypothetical protein | |
| BRADO6126 | 8 | 32 | -9.199665 | hypothetical protein | |
| BRADO6127 | 6 | 26 | -6.843480 | hypothetical protein | |
| BRADO6128 | 4 | 17 | -4.048502 | hypothetical protein | |
| BRADO6129 | 1 | 11 | -2.063378 | hypothetical protein | |
| BRADO6131 | -1 | 10 | 0.026775 | glycolate oxidase subunit GlcD | |
| BRADO6132 | 2 | 14 | -0.290377 | cytochrome C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6112 | RTXTOXIND | 30 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6119 | PF05272 | 32 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 69 | BRADO6192 | BRADO6198 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6192 | 8 | 28 | -4.687603 | acetyltransferase | |
| BRADO6193 | 8 | 30 | -5.182121 | lanthionine synthetase C-like protein | |
| BRADO6194 | 9 | 35 | -6.429002 | acetyltransferase | |
| BRADO6195 | 8 | 31 | -5.789946 | hypothetical protein | |
| BRADO6196 | 7 | 26 | -5.220215 | glycosyl transferase family protein | |
| BRADO6197 | 7 | 24 | -4.681978 | large exoprotein involved in heme utilization or | |
| BRADO6198 | 2 | 16 | -4.018414 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6192 | SACTRNSFRASE | 31 | 8e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6194 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6197 | INTIMIN | 39 | 6e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 70 | BRADO6358 | BRADO6412 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6358 | 2 | 11 | 1.154648 | divalent cation transporter, CorA-like | |
| BRADO6359 | 2 | 9 | 0.764231 | inorganic phosphate transporter | |
| BRADO6360 | 2 | 9 | 0.817548 | bifunctional enoyl-CoA hydratase/phosphate | |
| BRADO6361 | 0 | 11 | -1.008831 | acetate kinase | |
| BRADO6362 | -2 | 14 | -2.576120 | hypothetical protein | |
| BRADO6363 | 1 | 28 | -5.005296 | enoyl-ACP reductase | |
| BRADO6364 | 2 | 33 | -5.999883 | beta-lactamase | |
| BRADO6365 | 4 | 40 | -8.005979 | hypothetical protein | |
| BRADO6366 | 5 | 40 | -7.932696 | acyltransferase | |
| BRADO6367 | 6 | 39 | -7.873011 | hypothetical protein | |
| BRADO6368 | 8 | 43 | -8.489845 | phosphatase | |
| BRADO6371 | 8 | 44 | -9.538543 | hypothetical protein | |
| BRADO6372 | 8 | 44 | -9.763040 | hypothetical protein | |
| BRADO6373 | 8 | 37 | -8.011891 | VirD4/TraG family protein | |
| BRADO6374 | 7 | 35 | -7.401259 | protease (heat shock protein) | |
| BRADO6376 | 5 | 29 | -6.179903 | hypothetical protein | |
| BRADO6377 | 5 | 28 | -5.716420 | hypothetical protein | |
| BRADO6378 | 3 | 21 | -2.570057 | hypothetical protein | |
| BRADO6379 | 4 | 23 | -2.427368 | replication protein | |
| BRADO6380 | 3 | 23 | -1.936882 | hypothetical protein | |
| BRADO6381 | 4 | 27 | -3.599082 | hypothetical protein | |
| BRADO6382 | 6 | 27 | -3.553577 | hypothetical protein | |
| BRADO6383 | 8 | 29 | -4.487835 | DNA translocase FtsK | |
| BRADO6384 | 10 | 34 | -6.231214 | hypothetical protein | |
| BRADO6385 | 9 | 33 | -6.675456 | ankyrin repeat-containing protein | |
| BRADO6386 | 10 | 34 | -6.989732 | nitrilase/N-carbamoyl-D-aminoacid | |
| BRADO6387 | 9 | 36 | -5.857697 | antirestriction protein | |
| BRADO6390 | 9 | 37 | -6.289143 | hypothetical protein | |
| BRADO6391 | 9 | 36 | -6.016162 | hypothetical protein | |
| BRADO6392 | 9 | 41 | -6.890056 | hypothetical protein | |
| BRADO6394 | 9 | 41 | -7.253506 | hypothetical protein | |
| BRADO6395 | 8 | 42 | -7.634613 | hypothetical protein | |
| BRADO6396 | 10 | 44 | -9.214141 | hypothetical protein | |
| BRADO6397 | 9 | 40 | -7.837528 | transposon Tn21 resolvase | |
| BRADO6399 | 10 | 41 | -8.041609 | hypothetical protein | |
| BRADO6401 | 9 | 36 | -6.530716 | hypothetical protein | |
| BRADO6402 | 11 | 33 | -5.204739 | hypothetical protein | |
| BRADO6403 | 9 | 33 | -4.519533 | hypothetical protein | |
| BRADO6404 | 9 | 33 | -5.249918 | DNA breaking-rejoining protein | |
| BRADO6405 | 9 | 39 | -7.216823 | hypothetical protein | |
| BRADO6406 | 9 | 35 | -6.432486 | hypothetical protein | |
| BRADO6407 | 7 | 33 | -5.954262 | partition protein (ParA) | |
| BRADO6409 | 8 | 36 | -6.958372 | replication protein | |
| BRADO6410 | 8 | 30 | -4.912411 | hypothetical protein | |
| BRADO6412 | 4 | 18 | -3.080883 | cation-translocating ATPase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6361 | ACETATEKNASE | 374 | e-130 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6363 | DHBDHDRGNASE | 56 | 2e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6383 | GPOSANCHOR | 36 | 4e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6399 | ENTEROTOXINA | 29 | 0.022 | Heat-labile enterotoxin A chain signature. | |
>ENTEROTOXINA#Heat-labile enterotoxin A chain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6409 | PF05932 | 28 | 0.035 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6412 | ACRIFLAVINRP | 24 | 0.030 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 71 | BRADO6470 | BRADO6484 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6470 | 3 | 15 | 1.889853 | cell division ABC transporter ATP-binding | |
| BRADO6471 | 2 | 16 | 3.455219 | hypothetical protein | |
| BRADO6472 | 3 | 16 | 3.314239 | two-component response regulator | |
| BRADO6473 | 2 | 14 | 3.274702 | transcription elongation factor regulatory | |
| BRADO6474 | 1 | 13 | 2.634834 | phosphodiesterase (yfcE) | |
| BRADO6475 | 2 | 12 | 2.504807 | signal peptide | |
| BRADO6476 | 2 | 13 | 1.343204 | hypothetical protein | |
| BRADO6477 | 2 | 32 | -3.001195 | hypothetical protein | |
| BRADO6478 | 2 | 30 | -3.806274 | plasmid stabilisation system protein | |
| BRADO6479 | 2 | 22 | -1.456537 | hypothetical protein | |
| BRADO6480 | 1 | 18 | -0.291155 | hypothetical protein | |
| BRADO6481 | 3 | 21 | -0.037910 | transposase (fragment) | |
| BRADO6482 | 0 | 19 | 0.878591 | transposase | |
| BRADO6483 | 1 | 19 | 2.249392 | hypothetical protein | |
| BRADO6484 | 0 | 21 | 3.003045 | N-acetyl-gamma-glutamyl-phosphate reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6472 | HTHFIS | 76 | 2e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 72 | BRADO6541 | BRADO6565 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6541 | 2 | 15 | 2.918990 | hypothetical protein | |
| BRADO6542 | 4 | 16 | 1.117874 | hypothetical protein | |
| BRADO6543 | 6 | 17 | 0.200484 | signal peptide | |
| BRADO6544 | 4 | 23 | -2.173874 | hypothetical protein | |
| BRADO6545 | 4 | 25 | -2.933501 | hypothetical protein | |
| BRADO6546 | 9 | 37 | -5.859361 | disulfide bond formation protein B | |
| BRADO6547 | 4 | 26 | -4.119171 | *hypothetical protein | |
| BRADO6548 | 1 | 15 | -1.136164 | hypothetical protein | |
| BRADO6549 | -2 | 11 | 0.339187 | hypothetical protein | |
| BRADO6550 | 0 | 14 | 2.402510 | hypothetical protein | |
| BRADO6552 | 0 | 13 | 3.156422 | signal peptide | |
| BRADO6553 | 0 | 12 | 3.550339 | major facilitator superfamily permease | |
| BRADO6554 | 0 | 12 | 4.056240 | extracellular metal-binding protein | |
| BRADO6555 | -1 | 11 | 3.982702 | NAD synthetase | |
| BRADO6556 | 1 | 10 | 4.821577 | hypothetical protein | |
| BRADO6557 | -1 | 9 | 4.658984 | TetR family transcriptional regulator | |
| BRADO6558 | 0 | 9 | 4.420199 | short-chain dehydrogenase | |
| BRADO6559 | -1 | 11 | 3.406161 | hypothetical protein | |
| BRADO6560 | 0 | 12 | 2.473692 | signal peptide | |
| BRADO6561 | 0 | 10 | 1.928108 | hypothetical protein | |
| BRADO6562 | 0 | 11 | 2.395591 | hypothetical protein | |
| BRADO6563 | 0 | 11 | 1.878679 | hypothetical protein | |
| BRADO6564 | 1 | 12 | 1.598771 | acyl-CoA synthetase | |
| BRADO6565 | 2 | 11 | 1.417184 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6543 | PF03544 | 29 | 0.005 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6553 | TCRTETB | 37 | 1e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6557 | HTHTETR | 56 | 9e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6558 | DHBDHDRGNASE | 115 | 2e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6563 | IGASERPTASE | 38 | 1e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6565 | HTHFIS | 30 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 73 | BRADO6621 | BRADO6638 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6621 | 2 | 13 | 2.003852 | transcriptional regulator | |
| BRADO6622 | 0 | 12 | 2.050759 | hypothetical protein | |
| BRADO6623 | 0 | 11 | 1.794764 | hypothetical protein | |
| BRADO6624 | -1 | 12 | 2.679548 | flagellar basal body rod protein FlgC | |
| BRADO6625 | -1 | 12 | 2.777645 | hypothetical protein | |
| BRADO6626 | 0 | 11 | 2.734778 | hypothetical protein | |
| BRADO6627 | 2 | 19 | -2.484631 | bifunctional 3-demethylubiquinone-9 | |
| BRADO6628 | 2 | 22 | -3.061790 | hypothetical protein | |
| BRADO6629 | 2 | 24 | -2.955429 | hypothetical protein | |
| BRADO6630 | 3 | 23 | -3.558731 | hypothetical protein | |
| BRADO6631 | 2 | 22 | -3.514443 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO6632 | 3 | 27 | -4.074431 | hypothetical protein | |
| BRADO6633 | -1 | 17 | 2.229180 | *hypothetical protein | |
| BRADO6634 | 0 | 13 | 2.240012 | Maf-like protein | |
| BRADO6635 | 1 | 13 | 2.475137 | arsenate reductase | |
| BRADO6636 | 2 | 14 | 2.486731 | hypothetical protein | |
| BRADO6637 | 3 | 11 | 2.174419 | histidinol dehydrogenase | |
| BRADO6638 | 2 | 10 | 1.791108 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6624 | FLGHOOKAP1 | 29 | 0.005 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 74 | BRADO6915 | BRADO6947 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6915 | 0 | 12 | 3.036115 | hypothetical protein | |
| BRADO6916 | -1 | 11 | 1.760098 | NUDIX family protein | |
| BRADO6917 | -1 | 8 | 0.472185 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO6918 | 5 | 18 | -3.218042 | major facilitator transporter | |
| BRADO6919 | 6 | 20 | -3.899665 | short-chain dehydrogenase/reductase (SDR) | |
| BRADO6920 | 5 | 20 | -3.878810 | hypothetical protein | |
| BRADO6921 | 5 | 19 | -3.730237 | LysR family transcriptional regulator | |
| BRADO6922 | 5 | 19 | -3.726604 | monooxygenase, FAD binding (hydroxylase) | |
| BRADO6923 | 5 | 20 | -3.928574 | hypothetical protein | |
| BRADO6924 | -2 | 16 | -2.547071 | hypothetical protein | |
| BRADO6925 | -2 | 13 | -1.717142 | HlyD family secretion protein | |
| BRADO6926 | -2 | 18 | -3.085825 | toxin secretion ABC transporter ATP-binding and | |
| BRADO6927 | -2 | 20 | -2.533099 | RTX toxin-activating lysine-acyltransferase | |
| BRADO6928 | -2 | 20 | -2.695663 | signal peptide | |
| BRADO6929 | 0 | 23 | -3.693880 | hypothetical protein | |
| BRADO6930 | 2 | 25 | -4.237880 | hypothetical protein | |
| BRADO6931 | 3 | 25 | -4.070960 | hypothetical protein | |
| BRADO6932 | 3 | 20 | -4.062067 | transposase | |
| BRADO6933 | 5 | 26 | -5.781032 | hypothetical protein | |
| BRADO6934 | 5 | 26 | -5.646789 | hypothetical protein | |
| BRADO6935 | 4 | 23 | -4.291279 | hypothetical protein | |
| BRADO6936 | 6 | 27 | -4.702947 | hypothetical protein | |
| BRADO6939 | 7 | 31 | -5.379504 | hypothetical protein | |
| BRADO6940 | 10 | 48 | -8.038441 | hypothetical protein | |
| BRADO6941 | 10 | 52 | -8.890765 | hypothetical protein | |
| BRADO6942 | 11 | 53 | -8.951147 | hypothetical protein | |
| BRADO6943 | 10 | 54 | -9.115556 | phage integrase | |
| BRADO6944 | 9 | 55 | -9.337776 | hypothetical protein | |
| BRADO6945 | 8 | 51 | -8.203728 | hypothetical protein | |
| BRADO6946 | 4 | 27 | -3.765425 | hypothetical protein | |
| BRADO6947 | 2 | 22 | -2.790590 | excisionase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6918 | TCRTETA | 29 | 0.043 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6919 | DHBDHDRGNASE | 96 | 4e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6923 | ICENUCLEATIN | 79 | 4e-16 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6925 | RTXTOXIND | 333 | e-111 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6927 | RTXTOXINC | 83 | 1e-22 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6939 | BONTOXILYSIN | 29 | 0.038 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| 75 | BRADO6997 | BRADO7005 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6997 | 2 | 14 | -3.548649 | LuxR family transcriptional regulator | |
| BRADO6998 | 1 | 11 | -1.267350 | response regulator receiver | |
| BRADO6999 | 1 | 10 | -1.197498 | hypothetical protein | |
| BRADO7000 | 4 | 12 | -0.927226 | chemotaxis protein methyltransferase | |
| BRADO7001 | 4 | 11 | -0.609435 | chemotaxis protein CheY | |
| BRADO7002 | 3 | 10 | -0.434755 | chemotaxis protein CheW | |
| BRADO7003 | 3 | 11 | -0.985357 | chemotaxis protein CheA | |
| BRADO7004 | 4 | 16 | -2.458615 | flagellar biosynthesis repressor FlbT | |
| BRADO7005 | 2 | 11 | -2.046888 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6997 | HTHFIS | 113 | 1e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6998 | HTHFIS | 65 | 4e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7001 | HTHFIS | 83 | 6e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7003 | HTHFIS | 90 | 7e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7005 | FLAGELLIN | 58 | 5e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 76 | BRADO7017 | BRADO7075 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO7017 | 2 | 30 | -4.008746 | hypothetical protein | |
| BRADO7018 | 3 | 31 | -3.657540 | hypothetical protein | |
| BRADO7019 | 1 | 32 | -3.902323 | hypothetical protein | |
| BRADO7020 | 1 | 31 | -4.088307 | signal peptide | |
| BRADO7021 | 1 | 28 | -2.996241 | partition protein | |
| BRADO7022 | 1 | 26 | -3.025573 | glycosyl transferase family protein | |
| BRADO7023 | 0 | 22 | -2.367628 | hypothetical protein | |
| BRADO7024 | -1 | 16 | -2.001976 | glycosyl transferase family protein | |
| BRADO7025 | 3 | 18 | -3.755986 | glycosyl transferase family protein | |
| BRADO7026 | 5 | 25 | -5.507755 | dTDP-4-dehydrorhamnose reductase | |
| BRADO7027 | 7 | 40 | -9.638233 | dTDP-4-deoxyrhamnose 3,5 epimerase | |
| BRADO7028 | 7 | 33 | -6.429706 | glucose-1-phosphate thymidylyltransferase | |
| BRADO7029 | 7 | 31 | -5.769887 | dTDP-D-glucose 4,6-dehydratase | |
| BRADO7031 | 4 | 27 | -5.240637 | hypothetical protein | |
| BRADO7032 | 3 | 21 | -3.874060 | hypothetical protein | |
| BRADO7033 | 2 | 17 | -2.713114 | glycosyl transferase family protein | |
| BRADO7034 | -2 | 10 | -0.188872 | hypothetical protein | |
| BRADO7035 | 1 | 12 | -2.730211 | HlyD family secretion protein | |
| BRADO7036 | 1 | 15 | -3.263228 | toxin secretion ABC transporter (ATP-binding and | |
| BRADO7037 | 1 | 26 | -3.706122 | S-adenosyl-L-methionine (SAM)-dependent | |
| BRADO7038 | 1 | 24 | -3.301479 | hypothetical protein | |
| BRADO7039 | 1 | 22 | -2.994893 | hemolysin-type calcium-binding repeat-containing | |
| BRADO7040 | 0 | 21 | -3.032200 | hemolysin-type calcium-binding repeat-containing | |
| BRADO7042 | 1 | 23 | -3.040911 | glycosyl transferase family protein | |
| BRADO7043 | 1 | 22 | -3.081179 | hypothetical protein | |
| BRADO7044 | 2 | 21 | -4.063908 | oxidoreductase | |
| BRADO7045 | 1 | 22 | -4.930004 | glycosidase | |
| BRADO7046 | 0 | 24 | -5.004192 | glycosyl transferase family protein | |
| BRADO7047 | 0 | 26 | -4.964596 | GDP-mannose 6-dehydrogenase | |
| BRADO7048 | -1 | 26 | -4.189264 | ubiquinone/menaquinone biosynthesis | |
| BRADO7049 | 0 | 27 | -4.311997 | S-adenosyl-L-methionine (SAM)-methyltransferase | |
| BRADO7050 | 0 | 28 | -3.866042 | S-adenosyl-L-methionine-dependent | |
| BRADO7051 | 0 | 24 | -3.938804 | polysaccharide transporter | |
| BRADO7052 | 0 | 23 | -4.022636 | exopolysaccharide biosynthesis protein | |
| BRADO7053 | 1 | 26 | -3.663958 | glycosyl transferase family protein | |
| BRADO7054 | 1 | 25 | -3.943862 | S-adenosyl-L-methionine | |
| BRADO7055 | 2 | 25 | -3.746608 | hypothetical protein | |
| BRADO7056 | 2 | 26 | -3.499545 | exopolysaccharide biosynthesis protein | |
| BRADO7057 | 4 | 33 | -3.734454 | signal peptide | |
| BRADO7058 | 3 | 33 | -3.825529 | O-antigen polymerase | |
| BRADO7059 | 2 | 31 | -4.348898 | polysaccharide export protein | |
| BRADO7060 | 3 | 36 | -4.910346 | hypothetical protein | |
| BRADO7061 | 3 | 37 | -5.604304 | permease | |
| BRADO7062 | 3 | 38 | -6.380913 | serine/threonine protein phosphatase | |
| BRADO7063 | 4 | 36 | -5.169886 | hypothetical protein | |
| BRADO7064 | 3 | 33 | -4.770744 | sugar transferase | |
| BRADO7065 | 0 | 23 | -2.215325 | transposase | |
| BRADO7066 | 0 | 18 | -1.021008 | hypothetical protein | |
| BRADO7067 | -1 | 17 | 0.151490 | hypothetical protein | |
| BRADO7068 | -1 | 14 | 0.289866 | hypothetical protein | |
| BRADO7069 | 0 | 13 | 0.539991 | acyl-CoA N-acyltransferase | |
| BRADO7070 | 1 | 12 | 1.044237 | hypothetical protein | |
| BRADO7071 | 1 | 13 | 1.278642 | glycosyl transferase family protein | |
| BRADO7072 | 3 | 12 | 1.605440 | glycosyl transferase family protein | |
| BRADO7073 | 2 | 11 | 1.385359 | polysaccharide deacetylase | |
| BRADO7074 | 2 | 10 | 1.663723 | virulence factor MviN-like protein | |
| BRADO7075 | 2 | 11 | 1.978930 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7026 | NUCEPIMERASE | 39 | 1e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7027 | MECHCHANNEL | 27 | 0.034 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7029 | NUCEPIMERASE | 163 | 2e-49 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7035 | RTXTOXIND | 195 | 3e-59 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7039 | RTXTOXINA | 101 | 1e-24 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7040 | RTXTOXINA | 101 | 1e-24 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7047 | NUCEPIMERASE | 30 | 0.024 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7057 | cloacin | 29 | 0.021 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7059 | INVEPROTEIN | 30 | 0.010 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7068 | IGASERPTASE | 31 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 77 | BRADO0236 | BRADO0242 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0236 | 1 | 11 | 1.212034 | sensor histidine kinase | |
| BRADO0237 | -1 | 12 | 0.573935 | ABC transporter ATP binding protein/permease | |
| BRADO0238 | -1 | 10 | 0.731562 | methyltransferase | |
| BRADO0239 | 0 | 10 | 0.333237 | general stress protein 26 | |
| BRADO0240 | -1 | 11 | 0.520302 | hypothetical protein | |
| BRADO0242 | -1 | 11 | 0.447449 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0236 | HTHFIS | 71 | 5e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0237 | TONBPROTEIN | 30 | 0.020 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0240 | PRTACTNFAMLY | 26 | 0.014 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0242 | OMPADOMAIN | 66 | 2e-14 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 78 | BRADO0569 | BRADO0575 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO0569 | -1 | 11 | 0.892569 | hypothetical protein | |
| BRADO0571 | 0 | 12 | 0.673740 | methyltransferase hemK modifies release factors | |
| BRADO0572 | 0 | 14 | -0.374594 | peptide chain release factor 1 | |
| BRADO0573 | -1 | 13 | -0.588525 | phosphoenolpyruvate-protein phosphotransferase | |
| BRADO0574 | -1 | 13 | -1.894877 | aspartate kinase | |
| BRADO0575 | 0 | 12 | -1.890252 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0569 | IGASERPTASE | 28 | 0.035 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0573 | PHPHTRNFRASE | 587 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0574 | CARBMTKINASE | 29 | 0.026 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO0575 | SECA | 30 | 0.004 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 79 | BRADO1012 | BRADO1021 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1012 | 1 | 12 | 0.146766 | signal peptide | |
| BRADO1013 | 1 | 12 | -0.533300 | allantoate amidohydrolase | |
| BRADO1014 | -1 | 12 | -1.100808 | pilus assembly protein membrane protein | |
| BRADO1015 | 0 | 12 | -0.515539 | pilus assembly protein membrane protein | |
| BRADO1016 | 0 | 10 | -0.478573 | secretory protein kinase, cpaF-like gene | |
| BRADO1017 | -1 | 9 | -0.312628 | pilus assembly protein CpaE | |
| BRADO1018 | -2 | 11 | -1.020767 | pilus assembly protein CpaD | |
| BRADO1019 | -1 | 10 | -1.133850 | pilus assembly protein CpaC | |
| BRADO1020 | -1 | 12 | -2.403008 | pilus assembly protein CpaB | |
| BRADO1021 | 1 | 15 | -4.067852 | type IV prepilin peptidase, cpaA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1012 | SYCDCHAPRONE | 29 | 0.014 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1015 | BCTERIALGSPF | 28 | 0.040 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1017 | HTHFIS | 37 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1019 | BCTERIALGSPD | 118 | 1e-30 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1021 | PREPILNPTASE | 41 | 8e-07 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 80 | BRADO1109 | BRADO1118 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1109 | -2 | 11 | 0.503260 | acetyltransferase | |
| BRADO1110 | -3 | 12 | 0.441807 | hypothetical protein | |
| BRADO1111 | -3 | 11 | 0.526805 | biopolymer transport exbB protein membrane | |
| BRADO1112 | -3 | 12 | 0.513011 | hypothetical protein | |
| BRADO1113 | -2 | 12 | 0.851882 | cyclopropane-fatty-acyl-phospholipid synthase | |
| BRADO1114 | -2 | 10 | 1.275585 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BRADO1115 | -2 | 13 | 0.663702 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BRADO1116 | 0 | 11 | 0.905287 | hypothetical protein | |
| BRADO1117 | 1 | 12 | 0.755044 | inositol monophosphatase | |
| BRADO1118 | 0 | 13 | 0.332600 | beta-lactamase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1109 | SACTRNSFRASE | 46 | 3e-09 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1110 | OMPADOMAIN | 83 | 4e-20 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1114 | RTXTOXIND | 53 | 6e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1115 | ACRIFLAVINRP | 1045 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1116 | ENTEROVIROMP | 27 | 0.020 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1118 | PF03544 | 38 | 4e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 81 | BRADO1172 | BRADO1183 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1172 | -1 | 9 | -1.569276 | TonB protein | |
| BRADO1173 | -1 | 9 | -0.197321 | protein tolB | |
| BRADO1174 | 0 | 10 | 0.798389 | diguanylate cyclase/phosphodiesterase (EAL) | |
| BRADO1175 | -1 | 11 | 0.909745 | hypothetical protein | |
| BRADO1176 | 0 | 9 | 1.548440 | Outer membrane lipoprotein omp16 | |
| BRADO1177 | 1 | 9 | 1.450536 | hypothetical protein | |
| BRADO1178 | 1 | 9 | 1.961627 | hypothetical protein | |
| BRADO1179 | -1 | 9 | 1.324048 | tRNA(Ile)-lysidine synthase | |
| BRADO1180 | -2 | 7 | 1.244068 | cell division protein FtsH | |
| BRADO1181 | -1 | 9 | 1.584730 | hypothetical protein | |
| BRADO1182 | -2 | 8 | 1.364308 | hypothetical protein | |
| BRADO1183 | -2 | 8 | 1.363036 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1172 | TONBPROTEIN | 40 | 5e-06 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1175 | AUTOINDCRSYN | 41 | 1e-06 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1176 | OMPADOMAIN | 120 | 1e-35 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1178 | PERTACTIN | 31 | 0.006 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1180 | HTHFIS | 35 | 9e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1183 | HTHTETR | 62 | 7e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 82 | BRADO1286 | BRADO1298 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1286 | -2 | 14 | 0.093667 | hypothetical protein | |
| BRADO1287 | -1 | 14 | 0.076237 | helicase | |
| BRADO1290 | 0 | 16 | -0.645025 | hypothetical protein | |
| BRADO1291 | 0 | 18 | -0.068282 | general secretion pathway protein D | |
| BRADO1292 | 1 | 22 | 0.056580 | signal peptide | |
| BRADO1293 | 3 | 21 | 0.095828 | general secretion pathway protein E | |
| BRADO1294 | 3 | 20 | 0.219003 | general secretion pathway protein F | |
| BRADO1295 | 2 | 22 | 0.565205 | general secretion pathway protein G | |
| BRADO1296 | 1 | 20 | 1.185793 | general secretion pathway protein H | |
| BRADO1297 | 0 | 22 | 2.057297 | general secretion pathway protein I signal | |
| BRADO1298 | 0 | 19 | 2.099866 | general secretion pathway protein J |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1286 | PF03544 | 41 | 7e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1290 | PERTACTIN | 31 | 0.017 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1291 | BCTERIALGSPD | 224 | 2e-65 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1294 | BCTERIALGSPF | 192 | 1e-59 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1295 | BCTERIALGSPG | 131 | 5e-42 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1298 | BCTERIALGSPG | 34 | 1e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 83 | BRADO1360 | BRADO1367 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1360 | -2 | 10 | 0.472877 | O-linked N-acetylglucosamine transferase | |
| BRADO1361 | 1 | 14 | 1.513701 | hypothetical protein | |
| BRADO1362 | 0 | 14 | 1.894254 | hypothetical protein | |
| BRADO1363 | 0 | 14 | 1.656742 | hypothetical protein | |
| BRADO1364 | 0 | 12 | 1.128376 | hypothetical protein | |
| BRADO1365 | 0 | 12 | 1.069892 | transglycosylase | |
| BRADO1366 | -1 | 13 | 0.737668 | short-chain dehydrogenase | |
| BRADO1367 | -2 | 14 | 0.471215 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1360 | SYCDCHAPRONE | 50 | 3e-09 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1364 | cloacin | 29 | 0.009 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1366 | DHBDHDRGNASE | 84 | 4e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1367 | HTHFIS | 58 | 4e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 84 | BRADO1408 | BRADO1416 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1408 | 1 | 13 | 0.817614 | OmpR family two component response | |
| BRADO1409 | 1 | 14 | 1.159124 | ABC transporter ATP-binding protein | |
| BRADO1410 | 0 | 14 | 0.684559 | ABC transporter permease | |
| BRADO1411 | 0 | 13 | 1.483580 | ABC transporter substrate-binding subunit | |
| BRADO1412 | 0 | 12 | 2.627625 | two-component sensor histidine kinase | |
| BRADO1413 | 0 | 12 | 2.797327 | OmpR family two-component response regulator | |
| BRADO1414 | 0 | 13 | 2.502274 | hypothetical protein | |
| BRADO1415 | -1 | 11 | 1.947438 | signal peptide | |
| BRADO1416 | 1 | 10 | 2.350782 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1408 | HTHFIS | 94 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1409 | PF05272 | 28 | 0.043 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1412 | PF06580 | 31 | 0.006 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1413 | HTHFIS | 89 | 1e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1416 | cloacin | 38 | 4e-05 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 85 | BRADO1431 | BRADO1438 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1431 | -1 | 11 | 0.924712 | glycosyl transferase family protein | |
| BRADO1432 | 0 | 9 | 2.347946 | hypothetical protein | |
| BRADO1433 | 0 | 9 | 2.141370 | hypothetical protein | |
| BRADO1434 | 0 | 11 | 2.049072 | hemolysin III | |
| BRADO1435 | 0 | 13 | 2.488125 | short-chain dehydrogenase/reductase | |
| BRADO1437 | -1 | 12 | 2.086445 | hypothetical protein | |
| BRADO1438 | 0 | 14 | 2.486769 | signal peptide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1431 | PF04335 | 29 | 0.049 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1435 | DHBDHDRGNASE | 71 | 1e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1437 | cloacin | 30 | 0.022 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1438 | TYPE4SSCAGX | 31 | 0.021 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| 86 | BRADO1458 | BRADO1463 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1458 | -2 | 13 | -1.594996 | two-component hybrid sensor and regulator | |
| BRADO1459 | -2 | 11 | -1.440913 | LuxR family transcriptional regulator | |
| BRADO1460 | -2 | 10 | -1.206920 | LuxR family transcriptional regulator | |
| BRADO1461 | -2 | 9 | -1.127289 | Mox/cytochrome c like protein | |
| BRADO1462 | -2 | 9 | -1.559427 | quinoprotein ethanol dehydrogenase | |
| BRADO1463 | -2 | 9 | -0.815023 | protein prenyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1458 | PF06580 | 32 | 0.004 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1459 | HTHFIS | 62 | 5e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1460 | HTHFIS | 72 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1463 | SYCDCHAPRONE | 35 | 3e-04 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 87 | BRADO1468 | BRADO1481 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1468 | 0 | 15 | 1.963212 | *hypothetical protein | |
| BRADO1469 | 0 | 14 | 1.878817 | hypothetical protein | |
| BRADO1470 | 0 | 13 | 1.240422 | hypothetical protein | |
| BRADO1471 | 1 | 12 | 1.282135 | CysQ protein | |
| BRADO1472 | 1 | 13 | 0.178696 | Signal transduction histidine kinase | |
| BRADO1473 | 1 | 10 | -0.317803 | chemotaxis protein CheA | |
| BRADO1474 | 1 | 10 | -1.234561 | chemotaxis protein CheW | |
| BRADO1475 | 0 | 11 | -0.514226 | chemotaxis protein CheY | |
| BRADO1476 | 1 | 11 | -0.047159 | chemotaxis-specific methylesterase | |
| BRADO1477 | 1 | 11 | -0.587955 | chemotaxis protein methyltransferase | |
| BRADO1478 | 1 | 13 | -0.061966 | circadian clock protein KaiC | |
| BRADO1479 | 0 | 12 | 1.526334 | circadian clock protein | |
| BRADO1480 | -2 | 11 | 1.598582 | signal transduction histidine kinase | |
| BRADO1481 | -1 | 13 | 1.656129 | response regulator receiver |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1468 | GPOSANCHOR | 50 | 9e-09 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1469 | PF05616 | 32 | 0.002 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1473 | HTHFIS | 88 | 3e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1475 | HTHFIS | 84 | 1e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1476 | HTHFIS | 60 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1478 | CHANLCOLICIN | 31 | 0.017 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1481 | HTHFIS | 43 | 5e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 88 | BRADO1724 | BRADO1730 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1724 | 1 | 10 | 0.492826 | two-component sensor histidine kinase | |
| BRADO1725 | 0 | 9 | 0.811941 | two-component response regulator photosynthetic | |
| BRADO1726 | 0 | 9 | 0.970916 | hypothetical protein | |
| BRADO1727 | 0 | 9 | 0.496588 | RND family mulitdrug efflux protein | |
| BRADO1728 | -1 | 10 | 0.639553 | RND family mulitdrug efflux protein | |
| BRADO1729 | -1 | 11 | 0.825094 | RND family mulitdrug efflux protein | |
| BRADO1730 | 0 | 10 | 0.896735 | TetR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1724 | PF06580 | 29 | 0.040 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1725 | HTHFIS | 110 | 6e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1726 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1727 | ACRIFLAVINRP | 481 | e-155 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1728 | RTXTOXIND | 36 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1729 | RTXTOXIND | 51 | 4e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1730 | HTHTETR | 56 | 5e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 89 | BRADO1789 | BRADO1794 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1789 | 3 | 15 | 1.425382 | N-isopropylammelide isopropylaminohydrolase | |
| BRADO1790 | 2 | 14 | 1.986964 | N-carbamoyl-D-amino acid hydrolase | |
| BRADO1791 | 1 | 15 | 1.640849 | Hydantoin racemase HyuA | |
| BRADO1792 | 0 | 13 | 0.344405 | dihydropyrimidinase | |
| BRADO1793 | -1 | 13 | 0.346538 | UDP-glucose 4-epimerase | |
| BRADO1794 | -1 | 12 | 0.297897 | short chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1789 | UREASE | 46 | 2e-07 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1792 | UREASE | 38 | 1e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1793 | NUCEPIMERASE | 96 | 1e-24 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1794 | DHBDHDRGNASE | 99 | 7e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 90 | BRADO1896 | BRADO1904 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO1896 | -3 | 9 | 0.117381 | TetR family transcriptional regulator | |
| BRADO1897 | -3 | 9 | -0.050096 | hydrolase | |
| BRADO1899 | -3 | 10 | -0.269670 | hypothetical protein | |
| BRADO1900 | -2 | 11 | -0.282716 | MFS family tartrate transporter | |
| BRADO1901 | -1 | 11 | -0.256369 | component of multidrug efflux system signal | |
| BRADO1902 | 0 | 10 | -0.438886 | RND efflux transporter | |
| BRADO1903 | 3 | 10 | -0.406307 | TetR family transcriptional regulator | |
| BRADO1904 | 1 | 11 | -0.053733 | flavoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1896 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1901 | RTXTOXIND | 35 | 5e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1902 | ACRIFLAVINRP | 478 | e-154 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1903 | HTHTETR | 62 | 6e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO1904 | MICOLLPTASE | 28 | 0.028 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| 91 | BRADO2008 | BRADO2013 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2008 | 1 | 11 | 1.630065 | bacteriophytochrome | |
| BRADO2009 | -1 | 9 | 2.386268 | signal peptide | |
| BRADO2010 | 1 | 12 | 0.850936 | adenine DNA methyltransferase | |
| BRADO2011 | 1 | 10 | 0.616760 | hypothetical protein | |
| BRADO2012 | 0 | 9 | 0.662371 | molybdenum cofactor biosynthesis protein B | |
| BRADO2013 | -1 | 6 | 1.207993 | MarR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2008 | HTHFIS | 44 | 2e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2009 | IGASERPTASE | 30 | 0.018 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2010 | BINARYTOXINB | 31 | 0.006 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2013 | SACTRNSFRASE | 52 | 3e-10 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 92 | BRADO2034 | BRADO2043 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2034 | -2 | 9 | 1.680930 | pyruvate phosphate dikinase | |
| BRADO2035 | -2 | 10 | 1.793607 | hypothetical protein | |
| BRADO2036 | -2 | 8 | 1.427841 | L-aspartate oxidase | |
| BRADO2037 | 0 | 11 | 0.785089 | MFS permease | |
| BRADO2038 | -2 | 10 | 2.033465 | dehydrogenase NAD(P)-binding domain-containing | |
| BRADO2039 | -1 | 11 | 2.262747 | hypothetical protein | |
| BRADO2040 | 0 | 12 | 2.276798 | hypothetical protein | |
| BRADO2041 | 0 | 12 | 2.190156 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO2042 | -1 | 12 | 2.872476 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO2043 | -1 | 11 | 2.808280 | MSF permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2034 | PHPHTRNFRASE | 311 | 4e-97 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2035 | IGASERPTASE | 31 | 0.012 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2037 | TCRTETB | 42 | 4e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2038 | NUCEPIMERASE | 31 | 0.004 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2042 | CHANLCOLICIN | 33 | 0.004 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2043 | TONBPROTEIN | 31 | 0.012 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 93 | BRADO2184 | BRADO2194 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2184 | 0 | 19 | -2.195838 | bifunctional GDP-fucose synthetase | |
| BRADO2185 | 1 | 23 | -2.282394 | GDP-D-mannose dehydratase | |
| BRADO2186 | 2 | 21 | -1.909898 | hypothetical protein | |
| BRADO2187 | 1 | 20 | -2.279148 | hypothetical protein | |
| BRADO2188 | 1 | 21 | -2.619778 | hypothetical protein | |
| BRADO2189 | 0 | 20 | -2.226178 | peptide signal | |
| BRADO2190 | 1 | 23 | -2.239342 | hypothetical protein | |
| BRADO2191 | 0 | 20 | -2.269090 | general secretion pathway protein D signal | |
| BRADO2193 | -1 | 28 | -3.156291 | general secretion pathway protein H | |
| BRADO2194 | 1 | 30 | -3.755429 | general secretion pathway protein I signal |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2184 | NUCEPIMERASE | 96 | 1e-24 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2185 | NUCEPIMERASE | 94 | 5e-24 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2186 | cloacin | 29 | 0.021 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2187 | cloacin | 41 | 4e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2191 | BCTERIALGSPD | 210 | 9e-61 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2193 | BCTERIALGSPG | 31 | 8e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2194 | PilS_PF08805 | 27 | 0.022 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| 94 | BRADO2226 | BRADO2234 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2226 | 2 | 13 | -1.601789 | biopolymer transport protein ExbB/TolQ family | |
| BRADO2227 | 3 | 17 | -2.373421 | biopolymer transport protein ExbD/TolR family | |
| BRADO2228 | 3 | 17 | -2.239157 | hypothetical protein | |
| BRADO2229 | 3 | 20 | -2.504506 | signal peptide | |
| BRADO2230 | 1 | 15 | -1.138478 | signal peptide | |
| BRADO2231 | 0 | 16 | -1.274638 | peptidyl-prolyl isomerase | |
| BRADO2232 | 0 | 18 | -2.232709 | UDP-glucose lipid carrier transferase membrane | |
| BRADO2233 | 0 | 17 | -2.420112 | transposase | |
| BRADO2234 | -1 | 14 | -1.526735 | exopolysaccharide polymerization protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2226 | PERTACTIN | 35 | 0.001 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2228 | TONBPROTEIN | 39 | 8e-06 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2229 | PF03544 | 30 | 0.037 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2230 | GPOSANCHOR | 27 | 0.040 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2231 | PF09025 | 31 | 0.003 | YopR Core | |
>PF09025#YopR Core | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2234 | RTXTOXIND | 35 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 95 | BRADO2431 | BRADO2435 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2431 | -2 | 8 | 0.616796 | major facilitator superfamily permease | |
| BRADO2432 | -1 | 12 | 0.175692 | transcriptional regulator FixK | |
| BRADO2433 | 0 | 9 | -0.798548 | two component response regulator receiver | |
| BRADO2434 | 0 | 11 | -1.012425 | response regulator FixJ | |
| BRADO2435 | 0 | 10 | -0.949127 | sensor protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2431 | TCRTETA | 48 | 5e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2433 | HTHFIS | 87 | 3e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2434 | HTHFIS | 124 | 1e-35 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2435 | INVEPROTEIN | 31 | 0.009 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
| 96 | BRADO2496 | BRADO2505 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2496 | -2 | 9 | -0.436640 | hypothetical protein | |
| BRADO2497 | -2 | 11 | -0.496523 | transposase | |
| BRADO2499 | -2 | 14 | -0.186826 | cytochrome P450 | |
| BRADO2500 | 0 | 14 | -0.554500 | TetR family transcriptional regulator | |
| BRADO2501 | -1 | 15 | -0.284552 | RND efflux membrane fusion protein | |
| BRADO2502 | -2 | 14 | 0.302944 | RND family multidrug efflux protein | |
| BRADO2503 | -2 | 14 | 1.193585 | ABC transporter permease dipeptide transport | |
| BRADO2504 | -2 | 15 | 1.062866 | ABC transporter permease dipeptide transport | |
| BRADO2505 | -3 | 13 | 1.191032 | ABC transporter substrate-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2496 | NUCEPIMERASE | 57 | 1e-11 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2500 | HTHTETR | 61 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2501 | RTXTOXIND | 66 | 7e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2502 | ACRIFLAVINRP | 813 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2504 | SHAPEPROTEIN | 29 | 0.017 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2505 | TYPE3OMGPROT | 29 | 0.031 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| 97 | BRADO2554 | BRADO2561 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2554 | 2 | 9 | 0.409308 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO2555 | 2 | 9 | 0.374105 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO2556 | 1 | 9 | 0.468548 | sensory transducer protein signal peptide | |
| BRADO2557 | 0 | 9 | 0.463110 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO2558 | 0 | 9 | 0.777408 | signal peptide | |
| BRADO2559 | 0 | 10 | 1.006098 | methyl-accepting chemotaxis protein | |
| BRADO2560 | -2 | 7 | 1.387332 | methyl-accepting chemotaxis protein signal | |
| BRADO2561 | -2 | 8 | 1.065043 | sensory transducer protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2554 | PF05844 | 29 | 0.047 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2555 | IGASERPTASE | 39 | 1e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2556 | MECHCHANNEL | 32 | 0.003 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2561 | RTXTOXINA | 38 | 1e-04 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 98 | BRADO2650 | BRADO2654 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2650 | -1 | 9 | -0.955591 | signal peptide | |
| BRADO2651 | -1 | 9 | -0.756240 | cation/heavy metal efflux system protein | |
| BRADO2652 | -1 | 10 | -0.458317 | ABC transporter ATP-binding protein | |
| BRADO2653 | -1 | 9 | -0.335967 | branched-chain amino acid ABC transporter | |
| BRADO2654 | -1 | 9 | -0.840887 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2650 | RTXTOXIND | 49 | 3e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2651 | ACRIFLAVINRP | 567 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2653 | LPSBIOSNTHSS | 31 | 0.007 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2654 | ACETATEKNASE | 29 | 0.031 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| 99 | BRADO2868 | BRADO2876 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO2868 | -3 | 9 | -0.878449 | TetR family transcriptional regulator | |
| BRADO2869 | -2 | 8 | -0.928508 | hypothetical protein | |
| BRADO2870 | -1 | 8 | -1.042833 | ABC transporter ATP-binding protein | |
| BRADO2871 | 0 | 9 | -1.037185 | ABC transporter permease | |
| BRADO2872 | 1 | 9 | -0.616799 | adenylate cyclase | |
| BRADO2873 | 1 | 10 | 0.231031 | feruloyl esterase | |
| BRADO2874 | -1 | 10 | -0.067174 | hypothetical protein | |
| BRADO2875 | 0 | 9 | -0.263732 | hypothetical protein | |
| BRADO2876 | -1 | 7 | 0.265481 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2868 | HTHTETR | 71 | 2e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2869 | RTXTOXIND | 49 | 9e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2870 | BACYPHPHTASE | 28 | 0.045 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2871 | ABC2TRNSPORT | 47 | 5e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO2876 | BACINVASINB | 26 | 0.007 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| 100 | BRADO3057 | BRADO3064 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3057 | -1 | 11 | -1.247761 | multidrug ABC transporter ATPase and permease | |
| BRADO3058 | 0 | 15 | -1.825987 | hypothetical protein | |
| BRADO3059 | 2 | 18 | -2.576892 | transposase | |
| BRADO3061 | 5 | 25 | -2.361100 | 30S ribosomal protein S12 | |
| BRADO3062 | 4 | 25 | -2.059824 | 30S ribosomal protein S7 | |
| BRADO3063 | 4 | 25 | -2.240984 | elongation factor G | |
| BRADO3064 | 5 | 25 | -1.573217 | elongation factor Tu |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3057 | PF03544 | 46 | 2e-07 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3059 | IGASERPTASE | 41 | 8e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3063 | TCRTETOQM | 612 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3064 | TCRTETOQM | 85 | 6e-20 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 101 | BRADO3241 | BRADO3252 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3241 | 2 | 9 | 1.642841 | major facilitator transporter | |
| BRADO3242 | 0 | 7 | 0.792420 | hypothetical protein | |
| BRADO3243 | 0 | 7 | 0.768026 | signal peptide | |
| BRADO3244 | 0 | 7 | 0.415359 | response regulator in two-component reguatory | |
| BRADO3245 | 0 | 8 | 0.240123 | two-component system sensor protein | |
| BRADO3246 | -1 | 9 | 0.021566 | sensor histidine kinase | |
| BRADO3247 | -1 | 10 | 0.185777 | hypothetical protein | |
| BRADO3248 | 1 | 10 | 0.727257 | hypothetical protein | |
| BRADO3249 | 1 | 9 | 1.110441 | acyl-CoA carboxylase biotin-carrying | |
| BRADO3250 | 1 | 11 | 1.748972 | carboxyvinyl-carboxyphosphonate | |
| BRADO3251 | -1 | 11 | 1.865748 | acylphosphatase | |
| BRADO3252 | 0 | 11 | 2.005605 | ubiquinone/menaquinone biosynthesis |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3241 | TCRTETB | 41 | 6e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3244 | HTHFIS | 470 | e-166 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3245 | PF06580 | 38 | 8e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3246 | HTHFIS | 70 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3249 | RTXTOXIND | 30 | 0.037 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3252 | NUCEPIMERASE | 28 | 0.031 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 102 | BRADO3290 | BRADO3293 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3290 | -1 | 16 | 0.616152 | TetR family transcriptional regulator | |
| BRADO3291 | -2 | 15 | 0.233946 | oxidoreductase | |
| BRADO3292 | -2 | 19 | -0.414488 | outer membrane lipocalin, blc-like | |
| BRADO3293 | -1 | 17 | -0.055247 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3290 | HTHTETR | 54 | 2e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3291 | DHBDHDRGNASE | 57 | 8e-12 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3292 | BCTLIPOCALIN | 40 | 2e-06 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3293 | TYPE3IMSPROT | 28 | 0.002 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 103 | BRADO3372 | BRADO3379 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3372 | -1 | 8 | 1.445232 | hypothetical protein | |
| BRADO3373 | 0 | 7 | 1.551506 | hypothetical protein | |
| BRADO3374 | 1 | 9 | 2.757258 | hypothetical protein | |
| BRADO3375 | 1 | 9 | 2.826482 | hypothetical protein | |
| BRADO3376 | 1 | 9 | 2.239442 | toxin/protease ABC transporter ATP-binding | |
| BRADO3377 | 0 | 10 | 1.158073 | hypothetical protein | |
| BRADO3378 | 1 | 10 | 0.766274 | secretion HlyD family protein RTX secretion | |
| BRADO3379 | 2 | 13 | 0.579579 | PE-PGRS family protein (fragment) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3372 | IGASERPTASE | 46 | 4e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3375 | IGASERPTASE | 44 | 3e-07 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3378 | RTXTOXIND | 314 | e-105 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3379 | cloacin | 43 | 4e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 104 | BRADO3494 | BRADO3501 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3494 | -1 | 10 | 1.637083 | levodione reductase | |
| BRADO3495 | -1 | 10 | 1.284408 | signal peptide | |
| BRADO3496 | 1 | 12 | 0.647924 | leucyl/phenylalanyl-tRNA--protein transferase | |
| BRADO3497 | 0 | 10 | -0.049475 | signal transduction histidine kinase | |
| BRADO3498 | 0 | 13 | -0.628868 | two-component response regulator/receiver | |
| BRADO3499 | -2 | 12 | -0.596165 | two-component sensor histidine kinase | |
| BRADO3500 | -2 | 12 | -1.048201 | acetyl-CoA carboxylase biotin carboxylase | |
| BRADO3501 | -1 | 13 | -0.770147 | acetyl-CoA carboxylase, biotin carboxyl carrier |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3494 | DHBDHDRGNASE | 102 | 4e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3495 | PERTACTIN | 41 | 5e-06 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3497 | HTHFIS | 86 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3498 | HTHFIS | 53 | 5e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3499 | PF06580 | 42 | 5e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3501 | RTXTOXIND | 32 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 105 | BRADO3767 | BRADO3777 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3767 | -1 | 9 | 0.650532 | esterase | |
| BRADO3768 | -1 | 9 | 1.313685 | hypothetical protein | |
| BRADO3769 | -1 | 8 | 1.476712 | DNA helicase, ATP-dependent resolution of | |
| BRADO3770 | -1 | 7 | 0.968650 | hypothetical protein | |
| BRADO3771 | -2 | 7 | 0.994888 | transcription repair coupling factor | |
| BRADO3773 | -3 | 9 | 0.553985 | hypothetical protein | |
| BRADO3774 | -2 | 9 | 1.047529 | signal peptide | |
| BRADO3775 | -2 | 10 | 1.108768 | acid-CoA ligase | |
| BRADO3776 | -1 | 13 | 0.318563 | ABC transporter substrate-binding protein | |
| BRADO3777 | -1 | 14 | 0.328619 | signal peptide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3767 | BCTERIALGSPG | 36 | 1e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3769 | SECA | 46 | 4e-07 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3770 | SALSPVBPROT | 25 | 0.025 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3771 | SECA | 31 | 0.028 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3777 | PF06776 | 140 | 2e-43 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| 106 | BRADO3801 | BRADO3807 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3801 | 0 | 8 | 1.548089 | signal peptide | |
| BRADO3802 | 2 | 9 | 0.930834 | AsnC family transcriptional regulator | |
| BRADO3803 | 1 | 12 | 0.872973 | 1-aminocyclopropane-1-carboxylate deaminase | |
| BRADO3806 | 1 | 11 | 0.886011 | protein chain elongation factor EF-G, | |
| BRADO3807 | -1 | 11 | -0.338694 | acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3801 | IGASERPTASE | 40 | 1e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3803 | BCTERIALGSPC | 30 | 0.018 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3806 | TCRTETOQM | 480 | e-164 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3807 | SACTRNSFRASE | 40 | 8e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 107 | BRADO3816 | BRADO3829 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3816 | 2 | 13 | -1.824404 | permease of sugar ABC transporter | |
| BRADO3817 | 3 | 12 | 0.555006 | ABC transporter substrate-binding protein | |
| BRADO3818 | 2 | 12 | 1.545282 | hypothetical protein | |
| BRADO3819 | 2 | 9 | 1.456021 | *hypothetical protein | |
| BRADO3821 | 1 | 8 | 1.168095 | hypothetical protein | |
| BRADO3822 | 1 | 7 | 1.256540 | rare lipoprotein A family protein (rlpA) | |
| BRADO3823 | -1 | 7 | 1.453233 | hypothetical protein | |
| BRADO3824 | 0 | 9 | 0.794808 | hypothetical protein | |
| BRADO3825 | 0 | 8 | 0.390648 | epoxide hydrolase | |
| BRADO3826 | -1 | 9 | 0.266767 | serine-type D-Ala-D-Ala carboxypeptidase | |
| BRADO3827 | -1 | 9 | 0.655445 | thymidylate kinase | |
| BRADO3828 | -1 | 9 | 0.298032 | DNA polymerase III subunit delta' | |
| BRADO3829 | -2 | 9 | 0.044564 | methionyl-tRNA synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3816 | PF06580 | 30 | 0.013 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3819 | OUTRMMBRANEA | 28 | 0.002 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3823 | FLAGELLIN | 39 | 8e-05 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3824 | SACTRNSFRASE | 39 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3826 | BLACTAMASEA | 29 | 0.021 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3829 | IGASERPTASE | 44 | 3e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 108 | BRADO3856 | BRADO3861 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3856 | 0 | 7 | -0.141919 | nitrogen assimilation regulatory protein | |
| BRADO3857 | -1 | 8 | 0.270487 | nitrogen regulation protein | |
| BRADO3858 | 0 | 9 | 0.379991 | IclR family transcriptional regulator | |
| BRADO3859 | 0 | 8 | 0.660266 | hypothetical protein | |
| BRADO3860 | 0 | 8 | 0.849636 | D-3-phosphoglycerate dehydrogenase (PGDH) | |
| BRADO3861 | -1 | 9 | 1.149216 | MFS family tartrate transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3856 | HTHFIS | 423 | e-147 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3857 | PF06580 | 46 | 3e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3860 | ACRIFLAVINRP | 32 | 0.005 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3861 | TCRTETB | 30 | 0.019 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 109 | BRADO3900 | BRADO3904 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3900 | -2 | 9 | 0.842864 | hypothetical protein | |
| BRADO3901 | -2 | 8 | 0.415180 | *hypothetical protein | |
| BRADO3902 | -2 | 8 | 0.071503 | multidrug ABC transporter | |
| BRADO3903 | -2 | 8 | -0.466259 | multidrug ABC transporter | |
| BRADO3904 | 0 | 10 | -1.093329 | multidrug ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3900 | OMPADOMAIN | 62 | 2e-12 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3902 | ACRIFLAVINRP | 726 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3903 | ACRIFLAVINRP | 760 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3904 | RTXTOXIND | 40 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 110 | BRADO3942 | BRADO3947 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3942 | 3 | 13 | -1.913871 | hypothetical protein | |
| BRADO3943 | 2 | 10 | -2.088413 | hypothetical protein | |
| BRADO3944 | 2 | 10 | -2.197327 | oxidoreductase NAD(P)-binding subunit | |
| BRADO3945 | 3 | 10 | -2.335580 | hypothetical protein | |
| BRADO3946 | 3 | 10 | -2.318432 | sensor histidine kinase | |
| BRADO3947 | 0 | 16 | -2.816900 | sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3942 | TCRTETB | 26 | 0.041 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3943 | TCRTETOQM | 25 | 0.039 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3944 | DHBDHDRGNASE | 92 | 1e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3946 | HTHFIS | 75 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3947 | HTHFIS | 69 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 111 | BRADO3964 | BRADO3973 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO3964 | 3 | 11 | -0.155258 | hypothetical protein | |
| BRADO3966 | 1 | 9 | 0.064461 | toxin/protease ABC transporter ATP-binding | |
| BRADO3967 | 1 | 10 | 0.296786 | HlyD family secretion protein | |
| BRADO3968 | 2 | 10 | 0.225373 | hypothetical protein | |
| BRADO3970 | 2 | 10 | 0.381127 | hypothetical protein | |
| BRADO3971 | -1 | 10 | 0.435783 | hypothetical protein | |
| BRADO3973 | -1 | 10 | 0.421049 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3964 | TONBPROTEIN | 35 | 5e-04 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3967 | RTXTOXIND | 339 | e-112 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3971 | cloacin | 42 | 6e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO3973 | SYCDCHAPRONE | 39 | 3e-05 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 112 | BRADO4003 | BRADO4007 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4003 | 7 | 14 | -0.219919 | outer-membrane protein | |
| BRADO4004 | 6 | 11 | -0.217585 | outer-membrane protein | |
| BRADO4005 | 2 | 13 | -0.324432 | outer-membrane protein | |
| BRADO4006 | 2 | 14 | -0.017630 | outer-membrane protein | |
| BRADO4007 | 1 | 12 | 0.121643 | outer-membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4003 | OMPADOMAIN | 34 | 6e-04 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4004 | FLGBIOSNFLIP | 31 | 0.004 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4005 | OMPADOMAIN | 33 | 0.001 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4006 | OMPADOMAIN | 40 | 6e-06 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4007 | OUTRMMBRANEA | 37 | 4e-05 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| 113 | BRADO4099 | BRADO4106 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4099 | -2 | 9 | -0.690779 | hypothetical protein | |
| BRADO4100 | -2 | 12 | 1.040491 | major facilitator superfamily permease | |
| BRADO4101 | -2 | 11 | 0.377276 | 2-dehydro-3-deoxyphosphooctonate aldolase | |
| BRADO4102 | -1 | 9 | 0.277711 | hypothetical protein | |
| BRADO4103 | 0 | 10 | 0.488070 | CTP synthetase | |
| BRADO4104 | 1 | 11 | 1.275997 | preprotein translocase subunit SecG | |
| BRADO4105 | 1 | 12 | 1.040169 | transcriptional regulator | |
| BRADO4106 | -1 | 12 | 0.793201 | GNAT family acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4099 | FRAGILYSIN | 29 | 0.007 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4100 | TCRTETA | 56 | 7e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4104 | SECGEXPORT | 56 | 1e-13 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4105 | HTHTETR | 27 | 0.041 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4106 | SACTRNSFRASE | 45 | 1e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 114 | BRADO4143 | BRADO4149 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4143 | 0 | 7 | 1.702224 | serine protease | |
| BRADO4144 | 1 | 8 | 1.362084 | hypothetical protein | |
| BRADO4145 | 0 | 8 | -0.387268 | DNA polymerase III subunit alpha | |
| BRADO4146 | 2 | 17 | -1.087978 | hypothetical protein | |
| BRADO4147 | 0 | 13 | -0.369736 | outer-membrane protein | |
| BRADO4148 | -1 | 12 | -0.799111 | hypothetical protein | |
| BRADO4149 | -2 | 9 | -0.972072 | outer-membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4143 | V8PROTEASE | 57 | 6e-11 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4144 | PF03544 | 39 | 3e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4147 | OMPADOMAIN | 52 | 4e-10 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4149 | OMPADOMAIN | 36 | 1e-04 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 115 | BRADO4474 | BRADO4479 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4474 | 4 | 13 | -1.310280 | large-conductance mechanosensitive channel | |
| BRADO4475 | 5 | 13 | -0.972491 | dihydrodipicolinate synthase | |
| BRADO4476 | 4 | 15 | -0.753252 | lytic transglycosylase | |
| BRADO4477 | 9 | 20 | -2.320448 | hypothetical protein | |
| BRADO4478 | 4 | 16 | -1.933827 | porin | |
| BRADO4479 | 2 | 15 | -1.591297 | porin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4474 | MECHCHANNEL | 148 | 3e-49 | Bacterial mechano-sensitive ion channel signature. | |
>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4475 | CARBMTKINASE | 28 | 0.035 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4476 | ACETATEKNASE | 30 | 0.048 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4479 | PF03627 | 30 | 0.021 | PapG | |
>PF03627#PapG | |||||
| 116 | BRADO4587 | BRADO4595 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4587 | -4 | 14 | -0.906101 | TetR family transcriptional regulator | |
| BRADO4588 | -3 | 13 | -0.078566 | hypothetical protein | |
| BRADO4589 | -2 | 9 | 0.151863 | hypothetical protein | |
| BRADO4590 | -2 | 9 | 0.292327 | ATPase | |
| BRADO4592 | -1 | 11 | -0.038767 | nitrogen fixation protein FixG | |
| BRADO4593 | -2 | 12 | 0.277523 | hypothetical protein | |
| BRADO4594 | -1 | 11 | 0.465958 | RND family efflux pump membrane fusion protein | |
| BRADO4595 | 0 | 11 | 0.351903 | AcrB/AcrD/AcrF family cation mulitdrug efflux |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4587 | HTHTETR | 56 | 8e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4590 | HTHFIS | 38 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4594 | RTXTOXIND | 45 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4595 | ACRIFLAVINRP | 482 | e-155 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 117 | BRADO4634 | BRADO4642 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4634 | -3 | 10 | 0.488070 | recombination factor protein RarA | |
| BRADO4635 | -1 | 9 | 0.462336 | serine protease | |
| BRADO4636 | -1 | 10 | 1.551932 | MarR family transcriptional regulator | |
| BRADO4637 | -1 | 10 | 1.674742 | oxidoreductase quinone oxidoreductase | |
| BRADO4638 | 1 | 10 | 2.101003 | beta-lactamase | |
| BRADO4639 | -1 | 9 | 2.742928 | hypothetical protein | |
| BRADO4640 | -2 | 9 | 2.285522 | hypothetical protein | |
| BRADO4641 | -2 | 9 | 2.207784 | major facilitator superfamily permease | |
| BRADO4642 | -2 | 11 | 0.260306 | transcriptional regulator (NmrA-like) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4634 | HTHFIS | 36 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4635 | V8PROTEASE | 68 | 2e-14 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4640 | FLGBIOSNFLIP | 29 | 0.011 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4641 | TCRTETB | 43 | 2e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4642 | NUCEPIMERASE | 39 | 2e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 118 | BRADO4963 | BRADO4970 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO4963 | 2 | 17 | 0.099005 | oxalate/formate antiporter | |
| BRADO4964 | 0 | 11 | 0.231587 | oxalate/formate antiporter | |
| BRADO4965 | 1 | 11 | 0.397419 | hypothetical protein | |
| BRADO4966 | 0 | 10 | 0.264628 | NADPH quinone oxidoreductase | |
| BRADO4967 | 0 | 9 | 0.776991 | cation-efflux pump | |
| BRADO4968 | -1 | 8 | 0.169126 | two-component sensor histidine kinase | |
| BRADO4969 | 0 | 11 | 0.274305 | transposase | |
| BRADO4970 | -3 | 10 | 0.991768 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4963 | TCRTETA | 44 | 5e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4964 | TCRTETA | 47 | 9e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4968 | PF06580 | 35 | 8e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4969 | IGASERPTASE | 41 | 8e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO4970 | VACCYTOTOXIN | 28 | 0.019 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| 119 | BRADO5023 | BRADO5046 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5023 | 0 | 12 | -0.436608 | two-component sensor histidine kinase | |
| BRADO5024 | 2 | 13 | -2.154529 | flagellar biosynthesis protein FlhB | |
| BRADO5025 | 0 | 10 | 1.303816 | flagellar biosynthesis protein FliR | |
| BRADO5026 | 1 | 13 | 1.701321 | flagellar biosynthesis protein FliQ | |
| BRADO5027 | 0 | 12 | 2.501649 | flagellar hook-basal body protein FliE | |
| BRADO5028 | 2 | 12 | 2.303955 | flagellar basal body rod protein FlgC | |
| BRADO5029 | 2 | 12 | 2.690976 | flagellar basal-body rod protein FlgB | |
| BRADO5030 | 2 | 12 | 2.377261 | hypothetical protein | |
| BRADO5031 | 2 | 11 | 0.942892 | flagellar biosynthesis protein FliP | |
| BRADO5032 | 2 | 11 | 0.898556 | hypothetical protein | |
| BRADO5033 | 1 | 13 | -1.033591 | signal peptide | |
| BRADO5034 | 0 | 16 | 0.060524 | methyl-accepting chemotaxis protein | |
| BRADO5035 | 0 | 18 | -0.364097 | flagellar motor switch protein FliM | |
| BRADO5036 | 1 | 19 | 0.903472 | flagellar basal body protein FliL | |
| BRADO5037 | 1 | 16 | 2.113585 | flagellar basal body rod protein FlgF | |
| BRADO5038 | 0 | 12 | 2.537551 | flagellar basal body rod protein FlgG | |
| BRADO5039 | -1 | 12 | 2.695233 | flagellar basal body P-ring biosynthesis protein | |
| BRADO5040 | -1 | 11 | 2.268644 | flagellar basal body L-ring protein | |
| BRADO5041 | -1 | 11 | 2.523884 | hydratase/decarboxylase 4-oxalocrotonate | |
| BRADO5042 | -1 | 10 | 1.802293 | dihydrokaempferol 4-reductase | |
| BRADO5043 | 1 | 11 | 0.958813 | hypothetical protein | |
| BRADO5045 | 0 | 13 | 0.089105 | DnaK suppressor protein | |
| BRADO5046 | -1 | 14 | 0.123324 | NAD(P)-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5023 | HTHFIS | 83 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5024 | TYPE3IMSPROT | 318 | e-109 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5025 | TYPE3IMRPROT | 124 | 1e-36 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5026 | TYPE3IMQPROT | 59 | 1e-15 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5027 | FLGHOOKFLIE | 47 | 3e-10 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5028 | FLGHOOKAP1 | 30 | 0.004 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5030 | IGASERPTASE | 58 | 2e-11 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5031 | FLGBIOSNFLIP | 269 | 8e-94 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5032 | IGASERPTASE | 42 | 2e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5033 | CHANLCOLICIN | 30 | 0.008 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5035 | FLGMOTORFLIM | 280 | 2e-94 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5038 | FLGHOOKAP1 | 39 | 2e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5040 | FLGLRINGFLGH | 184 | 3e-60 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5042 | NUCEPIMERASE | 82 | 1e-19 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5046 | NUCEPIMERASE | 46 | 2e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 120 | BRADO5050 | BRADO5058 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5050 | 3 | 10 | -1.628225 | flagellar basal body P-ring biosynthesis protein | |
| BRADO5051 | 6 | 14 | -2.030815 | chemotactic signal-response protein CheL | |
| BRADO5052 | 5 | 14 | -2.110031 | hypothetical protein | |
| BRADO5053 | 7 | 17 | -2.122416 | hypothetical protein | |
| BRADO5054 | 5 | 13 | -1.036882 | flagellar biosynthesis regulatory protein FlaF | |
| BRADO5055 | 5 | 13 | -0.544020 | flagellin protein, C-terminus | |
| BRADO5056 | 3 | 12 | 0.732521 | flagellin protein, C-terminus | |
| BRADO5057 | 2 | 11 | 0.951689 | flagellar biosynthesis repressor FlbT | |
| BRADO5058 | 2 | 10 | 1.103173 | flagellin protein, C-terminus |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5050 | FLGPRINGFLGI | 396 | e-139 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5051 | FLGFLGJ | 35 | 7e-05 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5055 | FLAGELLIN | 56 | 2e-10 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5056 | FLAGELLIN | 60 | 1e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5058 | FLAGELLIN | 59 | 2e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 121 | BRADO5119 | BRADO5126 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5119 | 0 | 8 | 0.595523 | transposase | |
| BRADO5120 | 0 | 12 | 1.225796 | multidrug resistance protein EmrB-like protein | |
| BRADO5121 | -1 | 12 | 1.453650 | HlyD family multidrug resistance protein | |
| BRADO5122 | -1 | 11 | 1.023602 | hypothetical protein | |
| BRADO5123 | -2 | 13 | 0.630178 | signal peptide | |
| BRADO5124 | -2 | 12 | 0.367837 | glyoxalase/Bleomycin resistance | |
| BRADO5125 | -2 | 11 | -0.311352 | hypothetical protein | |
| BRADO5126 | -2 | 10 | -0.343775 | metallo-dependent hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5119 | IGASERPTASE | 41 | 9e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5120 | TCRTETB | 111 | 2e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5121 | RTXTOXIND | 110 | 2e-28 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5126 | UREASE | 37 | 2e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 122 | BRADO5449 | BRADO5453 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5449 | 1 | 9 | -0.334396 | Mo/Fe nitrogenase specific transcriptional | |
| BRADO5450 | 4 | 14 | -0.619430 | short-chain dehydrogenase | |
| BRADO5451 | 4 | 15 | -1.053147 | hypothetical protein | |
| BRADO5452 | 2 | 20 | -2.481157 | hypothetical protein | |
| BRADO5453 | 1 | 15 | 0.346940 | oxidoreductase NAD(P)-binding subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5449 | HTHFIS | 447 | e-155 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5450 | DHBDHDRGNASE | 100 | 3e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5451 | RTXTOXIND | 35 | 3e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5453 | DHBDHDRGNASE | 111 | 2e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 123 | BRADO5616 | BRADO5636 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5616 | -2 | 9 | -0.806095 | hypothetical protein | |
| BRADO5617 | -2 | 10 | -0.361407 | hypothetical protein | |
| BRADO5618 | -3 | 9 | -0.241525 | DNA helicase II | |
| BRADO5619 | 0 | 8 | 0.009058 | signal peptide | |
| BRADO5620 | -1 | 10 | 0.389453 | hypothetical protein | |
| BRADO5621 | 1 | 11 | -0.031030 | hypothetical protein | |
| BRADO5622 | 0 | 10 | 0.146290 | NAD dependent epimerase/dehydratase | |
| BRADO5623 | 1 | 10 | -0.829554 | isoprenylcysteine O-methyltransferase | |
| BRADO5624 | -1 | 9 | -0.674384 | hypothetical protein | |
| BRADO5625 | 1 | 9 | -1.882337 | signal peptide | |
| BRADO5626 | 1 | 10 | -2.510118 | hypothetical protein | |
| BRADO5627 | 1 | 11 | -1.899641 | ABC transporter ATP-binding protein | |
| BRADO5628 | 2 | 10 | -0.742897 | ABC transporter permease | |
| BRADO5629 | 1 | 9 | -0.482760 | signal peptide | |
| BRADO5630 | 1 | 9 | -1.100052 | ErfK/YbiS/YcfS/YnhG family protein | |
| BRADO5631 | 3 | 9 | 0.094119 | fumarate hydratase class II (fragment) | |
| BRADO5632 | 2 | 8 | 0.308402 | sugar (D-ribose) ABC transporter permease | |
| BRADO5633 | 1 | 10 | 0.261969 | sugar (D-ribose) ABC transporter ATP-binding | |
| BRADO5634 | -1 | 9 | -0.017157 | ribose ABC transporter substrate-binding | |
| BRADO5636 | 0 | 10 | 0.185101 | acyl carrier protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5616 | OMPADOMAIN | 39 | 3e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5620 | OMPADOMAIN | 72 | 4e-17 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5622 | NUCEPIMERASE | 75 | 3e-17 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5623 | VACCYTOTOXIN | 30 | 0.011 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5625 | PF06057 | 33 | 0.001 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5628 | ABC2TRNSPORT | 66 | 4e-15 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5629 | RTXTOXIND | 29 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5631 | PF05616 | 24 | 0.043 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5636 | ISCHRISMTASE | 31 | 3e-04 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 124 | BRADO5673 | BRADO5685 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5673 | -1 | 10 | -0.060610 | multidrug resistance protein B | |
| BRADO5674 | -2 | 9 | 0.955459 | multidrug resistance protein A | |
| BRADO5675 | -1 | 9 | 0.299895 | TetR family transcriptional regulator | |
| BRADO5676 | 0 | 10 | 1.319718 | transcriptional regulator | |
| BRADO5677 | -1 | 9 | 2.068738 | iron transport outer membrane receptor | |
| BRADO5678 | 2 | 12 | 3.121360 | hypothetical protein | |
| BRADO5679 | 2 | 13 | 3.779998 | extensin | |
| BRADO5680 | 2 | 13 | 3.392688 | hypothetical protein | |
| BRADO5681 | 2 | 13 | 3.188392 | hypothetical protein | |
| BRADO5682 | 2 | 12 | 2.928280 | two component sensor histidine kinase | |
| BRADO5683 | 2 | 11 | 2.270522 | OmpR family two component response | |
| BRADO5684 | 0 | 9 | 1.904983 | multidrug efflux system outer membrane subunit | |
| BRADO5685 | 0 | 8 | 1.231151 | macrolide ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5673 | TCRTETB | 94 | 1e-22 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5674 | RTXTOXIND | 110 | 2e-28 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5675 | HTHTETR | 70 | 4e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5677 | PF03544 | 29 | 0.048 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5681 | PF03544 | 33 | 0.001 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5682 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5683 | HTHFIS | 83 | 3e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5685 | RTXTOXIND | 61 | 5e-12 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 125 | BRADO5728 | BRADO5734 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5728 | 0 | 10 | 0.053504 | cation efflux membrane fusion protein | |
| BRADO5729 | -1 | 10 | -0.341621 | cation efflux system protein | |
| BRADO5730 | 2 | 17 | -1.185022 | hypothetical protein | |
| BRADO5731 | 4 | 15 | -0.357180 | bacterioferritin | |
| BRADO5732 | 3 | 17 | 0.195559 | bacterioferritin-associated ferredoxin | |
| BRADO5733 | 2 | 16 | -0.662758 | glycine-rich cell wall protein | |
| BRADO5734 | 2 | 13 | -0.880927 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5728 | RTXTOXIND | 45 | 3e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5729 | ACRIFLAVINRP | 691 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5731 | HELNAPAPROT | 28 | 0.016 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5733 | CHANLCOLICIN | 26 | 0.028 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5734 | OMPADOMAIN | 30 | 0.002 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 126 | BRADO5749 | BRADO5755 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5749 | -2 | 8 | 0.518800 | major facilitator superfamily permease | |
| BRADO5750 | -2 | 8 | 0.816319 | TetR family transcriptional regulator | |
| BRADO5751 | -1 | 8 | 0.479946 | response regulator receiver | |
| BRADO5752 | -2 | 7 | 0.684395 | sensor histidine kinase | |
| BRADO5753 | -2 | 11 | 0.885143 | ATPase | |
| BRADO5754 | -1 | 11 | 0.072498 | non-hemolytic phospholipase C | |
| BRADO5755 | -1 | 11 | 0.597442 | sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5749 | TCRTETA | 44 | 7e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5750 | HTHTETR | 43 | 1e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5751 | HTHFIS | 28 | 0.011 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5752 | HTHFIS | 104 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5755 | HTHFIS | 56 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 127 | BRADO5895 | BRADO5912 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5895 | 2 | 15 | 0.863450 | flagellar hook length determination protein | |
| BRADO5897 | 2 | 15 | -0.692175 | flagellar basal body rod modification protein | |
| BRADO5898 | -1 | 17 | -0.063328 | hypothetical protein | |
| BRADO5899 | 1 | 13 | -1.009717 | flagellar MS-ring protein | |
| BRADO5900 | 0 | 9 | -0.904632 | flagellar motor switch protein G | |
| BRADO5901 | 1 | 10 | -0.957793 | flagellar assembly protein H | |
| BRADO5902 | 1 | 11 | -0.982852 | flagellar motor switch protein | |
| BRADO5903 | 0 | 10 | -0.258413 | Fis family transcriptional regulator | |
| BRADO5904 | 0 | 13 | -0.824985 | hypothetical protein | |
| BRADO5906 | -1 | 10 | 0.471262 | hypothetical protein | |
| BRADO5908 | -2 | 12 | 0.474115 | signal peptide | |
| BRADO5909 | -2 | 11 | 0.692696 | NAD(P)H-flavin oxidoreductase | |
| BRADO5910 | -1 | 11 | 0.863391 | aliphatic sulfonate ABC transporter ATP-binding | |
| BRADO5911 | -1 | 15 | -0.665434 | aliphatic sulfonate ABC transporter permease | |
| BRADO5912 | 0 | 16 | -0.599002 | alkanesulfonate monooxygenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5895 | FLGHOOKFLIK | 34 | 9e-04 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5899 | FLGMRINGFLIF | 338 | e-112 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5900 | FLGMOTORFLIG | 305 | e-104 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5902 | FLGMOTORFLIN | 93 | 9e-28 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5903 | HTHFIS | 423 | e-147 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5904 | PRTACTNFAMLY | 49 | 7e-08 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5906 | IGASERPTASE | 50 | 2e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5912 | PF06917 | 31 | 0.010 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
| 128 | BRADO5965 | BRADO5970 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO5965 | 3 | 14 | 0.002356 | two-component sensor histidine kinase | |
| BRADO5966 | 3 | 14 | 0.207765 | hypothetical protein | |
| BRADO5967 | 3 | 13 | 0.247426 | hemagglutinin-like protein | |
| BRADO5968 | 0 | 11 | 0.154740 | hemagglutinin-like (or adhesin-like) with a | |
| BRADO5969 | -2 | 9 | 0.969651 | hemolysin activator-like protein with signal | |
| BRADO5970 | -1 | 9 | 0.620858 | elongation factor G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5965 | PF06580 | 44 | 3e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5967 | PF05860 | 64 | 3e-14 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5968 | PF05860 | 56 | 2e-11 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO5970 | TCRTETOQM | 309 | 5e-98 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 129 | BRADO6158 | BRADO6179 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6158 | 0 | 7 | 0.197860 | TetR family transcriptional regulator | |
| BRADO6159 | 1 | 8 | 0.181568 | branched-chain amino acid ABC transporter | |
| BRADO6160 | 1 | 9 | 0.469407 | hypothetical protein | |
| BRADO6161 | 2 | 8 | 1.736163 | AraC family transcriptional regulator | |
| BRADO6162 | 2 | 9 | 1.546057 | acyltransferase | |
| BRADO6163 | 1 | 10 | 1.643556 | phenylhydantoinase | |
| BRADO6164 | 0 | 11 | 1.442798 | hypothetical protein | |
| BRADO6165 | 0 | 9 | 1.206657 | UDP-glucose 4-epimerase | |
| BRADO6166 | 0 | 9 | 1.477017 | HlyD family secretion protein | |
| BRADO6167 | -1 | 8 | 1.436852 | transport protein permease | |
| BRADO6168 | -2 | 10 | 0.753666 | polyphosphate-selective porin O | |
| BRADO6169 | -1 | 9 | 0.632878 | hypothetical protein | |
| BRADO6170 | -1 | 10 | 0.915171 | guanylate cyclase | |
| BRADO6171 | -1 | 11 | 1.167766 | TetR family transcriptional regulator | |
| BRADO6172 | -1 | 11 | 0.681955 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BRADO6173 | -1 | 11 | -0.024736 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BRADO6174 | -2 | 9 | 0.684828 | hypothetical protein | |
| BRADO6175 | -2 | 9 | 0.965444 | hypothetical protein | |
| BRADO6176 | -2 | 11 | 0.024906 | MarR family transcriptional regulator | |
| BRADO6178 | -1 | 11 | -0.027775 | spermidine/putrescine ABC transporter | |
| BRADO6179 | -1 | 11 | -0.336078 | sperimidine/putrescine ABC transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6158 | HTHTETR | 42 | 3e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6162 | PF06580 | 29 | 0.028 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6163 | UREASE | 41 | 9e-06 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6165 | NUCEPIMERASE | 144 | 8e-43 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6166 | RTXTOXIND | 106 | 1e-27 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6167 | TCRTETB | 51 | 6e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6171 | HTHTETR | 53 | 5e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6172 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6173 | ACRIFLAVINRP | 1069 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6179 | PF05272 | 29 | 0.043 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 130 | BRADO6191 | BRADO6197 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6191 | 1 | 21 | -1.980488 | 3-hydroxyisobutyrate dehydrogenase | |
| BRADO6192 | 8 | 28 | -4.687603 | acetyltransferase | |
| BRADO6193 | 8 | 30 | -5.182121 | lanthionine synthetase C-like protein | |
| BRADO6194 | 9 | 35 | -6.429002 | acetyltransferase | |
| BRADO6195 | 8 | 31 | -5.789946 | hypothetical protein | |
| BRADO6196 | 7 | 26 | -5.220215 | glycosyl transferase family protein | |
| BRADO6197 | 7 | 24 | -4.681978 | large exoprotein involved in heme utilization or |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6191 | BCTERIALGSPF | 30 | 0.012 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6192 | SACTRNSFRASE | 31 | 8e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6194 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6197 | INTIMIN | 39 | 6e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| 131 | BRADO6304 | BRADO6313 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6304 | 0 | 7 | 2.877830 | multidrug ABC transporter | |
| BRADO6305 | 0 | 9 | 2.836999 | multidrug resistant protein | |
| BRADO6306 | 1 | 10 | 2.566473 | hypothetical protein | |
| BRADO6307 | -1 | 11 | 0.877448 | hypothetical protein | |
| BRADO6308 | 1 | 11 | 0.132702 | hypothetical protein | |
| BRADO6309 | 1 | 12 | -0.015195 | signal peptide | |
| BRADO6310 | -1 | 9 | 0.828674 | cytochrome b561 family protein | |
| BRADO6311 | -1 | 9 | 0.344487 | hypothetical protein | |
| BRADO6312 | 1 | 10 | 0.239198 | hypothetical protein | |
| BRADO6313 | 1 | 12 | -0.441902 | energy transducer TonB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6304 | ACRIFLAVINRP | 596 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6305 | RTXTOXIND | 32 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6306 | IGASERPTASE | 42 | 4e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6307 | PF03544 | 31 | 0.009 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6310 | PF03544 | 30 | 0.010 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6313 | PF03544 | 59 | 1e-12 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 132 | BRADO6338 | BRADO6353 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6338 | -1 | 21 | 1.190069 | Type II secretory pathway, prepilin signal | |
| BRADO6339 | 0 | 23 | 1.301236 | general secretion pathway protein N, GspN | |
| BRADO6340 | 0 | 22 | 0.707856 | general secretion pathway protein M, GspM | |
| BRADO6341 | -1 | 21 | 0.344344 | general secretion pathway protein L, GspL | |
| BRADO6342 | 0 | 15 | 0.682137 | general secretion pathway protein K, GspK | |
| BRADO6343 | 2 | 13 | 1.047193 | general secretion pathway protein J, GspJ | |
| BRADO6344 | 1 | 10 | 0.724153 | general secretion pathway protein I, GspI | |
| BRADO6345 | 0 | 9 | 0.769348 | general secretion pathway protein H | |
| BRADO6346 | 0 | 8 | 0.036466 | general secretion pathway protein G | |
| BRADO6347 | 0 | 8 | -0.046864 | general secretion pathway protein F | |
| BRADO6348 | 0 | 7 | 0.270540 | general secretion pathway protein E | |
| BRADO6349 | -1 | 8 | 0.365699 | general secretion pathway protein D | |
| BRADO6350 | -1 | 9 | 0.010226 | Sel1 repeat-containing protein | |
| BRADO6351 | 0 | 11 | -0.692362 | phosphoesterase family protein signal peptide | |
| BRADO6352 | -2 | 13 | -0.071396 | hypothetical protein | |
| BRADO6353 | -3 | 13 | 0.232535 | pyruvate, phosphate dikinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6338 | PREPILNPTASE | 63 | 2e-14 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6343 | PilS_PF08805 | 31 | 0.003 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6344 | BCTERIALGSPH | 28 | 0.014 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6345 | BCTERIALGSPG | 41 | 2e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6346 | BCTERIALGSPG | 134 | 4e-43 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6347 | BCTERIALGSPF | 245 | 1e-79 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6349 | BCTERIALGSPD | 212 | 3e-61 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6353 | PHPHTRNFRASE | 71 | 3e-15 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 133 | BRADO6516 | BRADO6520 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6516 | -2 | 13 | 2.308479 | chaperone protein (yegD) | |
| BRADO6517 | -1 | 14 | 2.942972 | hypothetical protein | |
| BRADO6519 | -1 | 13 | 2.280222 | hypothetical protein | |
| BRADO6520 | 0 | 9 | 1.312765 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6516 | SHAPEPROTEIN | 45 | 4e-07 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6517 | IGASERPTASE | 39 | 8e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6519 | PF03544 | 31 | 0.012 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6520 | PF03544 | 30 | 0.015 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 134 | BRADO6667 | BRADO6673 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6667 | -1 | 13 | 1.208328 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO6668 | -1 | 15 | 1.285180 | hypothetical protein | |
| BRADO6669 | -1 | 14 | 1.572765 | outer-membrane immunogenic protein | |
| BRADO6670 | 0 | 14 | 1.764612 | methyl-accepting chemotaxis receptor/sensory | |
| BRADO6671 | 0 | 13 | 2.012398 | metallo-hydrolase/oxidoreductase superfamily | |
| BRADO6672 | -1 | 12 | 2.518453 | 5-aminolevulinate synthase | |
| BRADO6673 | -1 | 10 | 2.499152 | two-component hybrid sensor histidine kinase and |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6667 | FLAGELLIN | 37 | 2e-04 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6669 | OMPADOMAIN | 53 | 3e-10 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6670 | IGASERPTASE | 32 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6673 | HTHFIS | 48 | 2e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 135 | BRADO6830 | BRADO6833 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6830 | -1 | 10 | -0.969882 | sugar ABC transporter substrate-binding protein | |
| BRADO6831 | 0 | 11 | -0.835970 | sensor histidine kinase | |
| BRADO6832 | 2 | 12 | -0.876347 | two-component system regulator response | |
| BRADO6833 | 0 | 13 | -0.858220 | two-component system regulator, response |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6830 | MALTOSEBP | 30 | 0.013 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6831 | PF06580 | 41 | 1e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6832 | PF06580 | 41 | 6e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6833 | HTHFIS | 88 | 6e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 136 | BRADO6894 | BRADO6901 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6894 | 1 | 10 | -2.463991 | branched-chain amino acid ABC transporter | |
| BRADO6895 | 1 | 9 | -2.614060 | branched-chain amino acid ABC transporter | |
| BRADO6896 | 0 | 7 | -2.102776 | branched-chain amino acid ABC transporter | |
| BRADO6897 | 0 | 7 | -2.038738 | branched-chain amino acid ABC transporter | |
| BRADO6898 | 1 | 9 | -1.089532 | sensor histidine kinase | |
| BRADO6899 | 1 | 10 | -0.537485 | chemotaxis protein CheY | |
| BRADO6900 | 2 | 12 | -1.036326 | flavin-containing monooxygenase | |
| BRADO6901 | 3 | 12 | 0.416762 | serine protease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6894 | PF05272 | 31 | 0.004 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6898 | HTHFIS | 81 | 7e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6899 | HTHFIS | 86 | 9e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6901 | V8PROTEASE | 55 | 8e-11 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| 137 | BRADO6918 | BRADO6925 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6918 | 5 | 18 | -3.218042 | major facilitator transporter | |
| BRADO6919 | 6 | 20 | -3.899665 | short-chain dehydrogenase/reductase (SDR) | |
| BRADO6920 | 5 | 20 | -3.878810 | hypothetical protein | |
| BRADO6921 | 5 | 19 | -3.730237 | LysR family transcriptional regulator | |
| BRADO6922 | 5 | 19 | -3.726604 | monooxygenase, FAD binding (hydroxylase) | |
| BRADO6923 | 5 | 20 | -3.928574 | hypothetical protein | |
| BRADO6924 | -2 | 16 | -2.547071 | hypothetical protein | |
| BRADO6925 | -2 | 13 | -1.717142 | HlyD family secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6918 | TCRTETA | 29 | 0.043 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6919 | DHBDHDRGNASE | 96 | 4e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6923 | ICENUCLEATIN | 79 | 4e-16 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6925 | RTXTOXIND | 333 | e-111 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 138 | BRADO6975 | BRADO6983 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6975 | 0 | 11 | 0.954372 | AcrB/AcrD/AcrF family mulitdrug efflux protein | |
| BRADO6976 | -1 | 10 | 1.841546 | HlyD family secretion protein | |
| BRADO6977 | -1 | 9 | 1.923896 | hypothetical protein | |
| BRADO6978 | -1 | 9 | 2.039414 | caspase-like domain-containing protein | |
| BRADO6979 | -1 | 10 | 2.186894 | Zn-dependent hydrolase | |
| BRADO6980 | -2 | 11 | 2.197188 | hypothetical protein | |
| BRADO6981 | 0 | 11 | 1.840084 | signal peptide | |
| BRADO6982 | 0 | 11 | 1.400294 | peptidase/caspase-like | |
| BRADO6983 | 0 | 12 | 0.954827 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6975 | ACRIFLAVINRP | 623 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6976 | RTXTOXIND | 38 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6977 | OMPADOMAIN | 82 | 2e-20 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6978 | TONBPROTEIN | 47 | 6e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6981 | RTXTOXIND | 37 | 9e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6983 | PF04183 | 33 | 0.005 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| 139 | BRADO6988 | BRADO7010 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO6988 | -1 | 8 | 0.124536 | dihydroxy-acid dehydratase | |
| BRADO6989 | 0 | 6 | 0.172537 | ABC transporter permease | |
| BRADO6990 | 0 | 8 | 0.180229 | ABC transporter ATP-binding protein | |
| BRADO6991 | -1 | 7 | 0.222247 | ABC transporter substrate-binding protein | |
| BRADO6992 | 0 | 8 | 0.240249 | GntR family transcriptional regulator | |
| BRADO6993 | 1 | 8 | -0.105512 | methyl-accepting chemotaxis protein | |
| BRADO6994 | 0 | 10 | -0.709034 | methyl-accepting chemotaxis protein | |
| BRADO6995 | 0 | 11 | -1.578389 | response regulator receiver | |
| BRADO6996 | 0 | 11 | -1.810538 | sensor histidine kinase | |
| BRADO6997 | 2 | 14 | -3.548649 | LuxR family transcriptional regulator | |
| BRADO6998 | 1 | 11 | -1.267350 | response regulator receiver | |
| BRADO6999 | 1 | 10 | -1.197498 | hypothetical protein | |
| BRADO7000 | 4 | 12 | -0.927226 | chemotaxis protein methyltransferase | |
| BRADO7001 | 4 | 11 | -0.609435 | chemotaxis protein CheY | |
| BRADO7002 | 3 | 10 | -0.434755 | chemotaxis protein CheW | |
| BRADO7003 | 3 | 11 | -0.985357 | chemotaxis protein CheA | |
| BRADO7004 | 4 | 16 | -2.458615 | flagellar biosynthesis repressor FlbT | |
| BRADO7005 | 2 | 11 | -2.046888 | hypothetical protein | |
| BRADO7006 | 1 | 11 | -2.445670 | hypothetical protein | |
| BRADO7007 | 0 | 9 | -2.261471 | Crp/Fnr family transcriptional regulator | |
| BRADO7008 | 1 | 8 | -2.169277 | response regulator receiver | |
| BRADO7009 | 0 | 9 | -1.835575 | response regulator receiver | |
| BRADO7010 | 0 | 9 | -1.545713 | sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6988 | PF00577 | 31 | 0.019 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6990 | PF05272 | 28 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6994 | PYOCINKILLER | 31 | 0.020 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6995 | HTHFIS | 93 | 6e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6996 | HTHFIS | 58 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6997 | HTHFIS | 113 | 1e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO6998 | HTHFIS | 65 | 4e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7001 | HTHFIS | 83 | 6e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7003 | HTHFIS | 90 | 7e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7005 | FLAGELLIN | 58 | 5e-11 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7008 | HTHFIS | 83 | 6e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7009 | HTHFIS | 60 | 1e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7010 | HTHFIS | 77 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 140 | BRADO7113 | BRADO7123 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| BRADO7113 | 0 | 12 | -0.529909 | TetR family transcriptional regulator | |
| BRADO7114 | -1 | 8 | -1.429421 | hypothetical protein | |
| BRADO7116 | -1 | 9 | -0.437900 | sensor histidine kinase | |
| BRADO7117 | -1 | 11 | 0.184888 | hypothetical protein | |
| BRADO7118 | 0 | 10 | 0.578086 | hypothetical protein | |
| BRADO7119 | 0 | 10 | 0.706301 | hypothetical protein | |
| BRADO7120 | 1 | 11 | 0.992138 | ABC transporter permease | |
| BRADO7121 | 0 | 10 | 1.399166 | ABC transporter permease ATP-binding protein | |
| BRADO7122 | 0 | 11 | 1.759015 | HlyD family secretion protein | |
| BRADO7123 | -1 | 10 | 0.962186 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7113 | HTHTETR | 42 | 3e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7116 | HTHFIS | 64 | 4e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7119 | OMPADOMAIN | 35 | 2e-04 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7120 | ABC2TRNSPORT | 40 | 6e-06 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7121 | PF05272 | 33 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7122 | RTXTOXIND | 54 | 3e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| BRADO7123 | SYCDCHAPRONE | 56 | 4e-11 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||