| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | E4F39_00005 | E4F39_00155 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_00005 | -1 | 12 | 3.655617 | ABC transporter permease | |
| E4F39_00015 | -1 | 16 | 4.363494 | syringomycin synthesis regulator SyrP | |
| E4F39_00020 | -2 | 15 | 4.379853 | class I SAM-dependent methyltransferase | |
| E4F39_00025 | -1 | 15 | 4.097333 | citrate/2-methylcitrate synthase | |
| E4F39_00030 | 0 | 14 | 2.996228 | acyl-CoA dehydrogenase | |
| E4F39_00035 | 1 | 15 | 3.578924 | 3-oxoacyl-ACP synthase | |
| E4F39_00040 | 1 | 15 | 3.416955 | acyl-CoA ligase (AMP-forming), exosortase A | |
| E4F39_00045 | 0 | 15 | 2.302739 | PLP-dependent decarboxylase | |
| E4F39_00050 | 2 | 17 | 2.795900 | 3-oxoacyl-ACP synthase | |
| E4F39_00055 | 2 | 16 | 2.863961 | ferritin-like domain-containing protein | |
| E4F39_00060 | 1 | 14 | 3.314729 | hypothetical protein | |
| E4F39_00065 | 1 | 13 | 3.135712 | hypothetical protein | |
| E4F39_00070 | 1 | 12 | 2.960896 | acyl carrier protein | |
| E4F39_00075 | 2 | 12 | 3.055067 | hypothetical protein | |
| E4F39_00080 | 3 | 12 | 3.191975 | fatty acyl-AMP ligase | |
| E4F39_00085 | 4 | 13 | 3.992061 | LysR family transcriptional regulator | |
| E4F39_00090 | 3 | 14 | 3.744302 | epstein-Barr virus | |
| E4F39_00095 | 2 | 14 | 3.467707 | GntR family transcriptional regulator | |
| E4F39_00100 | 1 | 13 | 2.918982 | N-acetylglucosamine-6-phosphate deacetylase | |
| E4F39_00105 | -1 | 12 | 3.283753 | SIS domain-containing protein | |
| E4F39_00110 | -2 | 9 | 3.130316 | phosphoenolpyruvate--protein phosphotransferase | |
| E4F39_00115 | -2 | 9 | 2.118359 | PTS N-acetyl-D-glucosamine transporter | |
| E4F39_00120 | 0 | 15 | 2.169928 | hypothetical protein | |
| E4F39_00125 | -2 | 9 | 1.472418 | hypothetical protein | |
| E4F39_00135 | -1 | 12 | -1.687589 | hypothetical protein | |
| E4F39_00140 | -1 | 12 | -2.546738 | hypothetical protein | |
| E4F39_00145 | 1 | 11 | -3.658288 | cytochrome bd-I oxidase subunit CydX | |
| E4F39_00150 | 0 | 9 | -3.927522 | cytochrome d ubiquinol oxidase subunit II | |
| E4F39_00155 | 0 | 9 | -4.168259 | cytochrome d ubiquinol oxidase subunit I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00005 | ABC2TRNSPORT | 32 | 0.003 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00110 | PHPHTRNFRASE | 513 | e-175 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 2 | E4F39_00305 | E4F39_00365 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_00305 | 2 | 11 | -2.538271 | ATP-dependent protease | |
| E4F39_00310 | 1 | 12 | -3.043905 | RNase adapter RapZ | |
| E4F39_00315 | 1 | 13 | -3.267589 | HPr kinase/phosphorylase | |
| E4F39_00320 | -1 | 14 | -3.038941 | PTS IIA-like nitrogen-regulatory protein PtsN | |
| E4F39_00325 | -2 | 14 | -2.432721 | ribosome-associated translation inhibitor RaiA | |
| E4F39_00330 | -2 | 15 | -0.924387 | hypothetical protein | |
| E4F39_00335 | -1 | 13 | -0.425086 | RNA polymerase factor sigma-54 | |
| E4F39_00340 | 0 | 13 | 0.894660 | LPS export ABC transporter ATP-binding protein | |
| E4F39_00345 | 1 | 12 | 1.107467 | lipopolysaccharide transport periplasmic protein | |
| E4F39_00350 | 1 | 11 | 1.058524 | LPS export ABC transporter periplasmic protein | |
| E4F39_00355 | 3 | 12 | 1.429582 | HAD family hydrolase | |
| E4F39_00360 | 4 | 11 | 1.413466 | KpsF/GutQ family sugar-phosphate isomerase | |
| E4F39_00365 | 3 | 11 | 0.922792 | sodium/hydrogen exchanger family protein |
| 3 | E4F39_00415 | E4F39_00515 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_00415 | 4 | 14 | -0.872050 | MFS transporter | |
| E4F39_00420 | 5 | 18 | -0.848232 | single-stranded DNA-binding protein | |
| E4F39_00425 | 4 | 32 | -6.693239 | dienelactone hydrolase family protein | |
| E4F39_00430 | 4 | 36 | -7.858434 | hypothetical protein | |
| E4F39_00435 | 4 | 38 | -7.861004 | hydrolase | |
| E4F39_00440 | 1 | 10 | -1.161897 | transcriptional regulator | |
| E4F39_00445 | -1 | 8 | -0.246252 | hypothetical protein | |
| E4F39_00450 | 0 | 8 | -0.108073 | DUF262 domain-containing protein | |
| E4F39_00455 | 0 | 10 | 2.399875 | carboxymuconolactone decarboxylase | |
| E4F39_00460 | 1 | 11 | 2.461844 | hypothetical protein | |
| E4F39_00465 | 1 | 11 | 2.500554 | hypothetical protein | |
| E4F39_00470 | 1 | 9 | -0.234880 | hypothetical protein | |
| E4F39_00480 | 8 | 26 | -5.383258 | hypothetical protein | |
| E4F39_00485 | 2 | 16 | -1.304141 | hypothetical protein | |
| E4F39_00490 | 1 | 10 | 3.594913 | hypothetical protein | |
| E4F39_00495 | 1 | 12 | 3.500437 | hypothetical protein | |
| E4F39_00500 | 0 | 11 | 3.503947 | hypothetical protein | |
| E4F39_00505 | 2 | 9 | 4.067892 | hypothetical protein | |
| E4F39_00510 | 2 | 11 | 3.994206 | FHA domain-containing protein | |
| E4F39_00515 | 1 | 11 | 3.354823 | TOMM system kinase/cyclase fusion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00415 | TCRTETA | 86 | 1e-20 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00420 | cloacin | 42 | 4e-07 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00450 | BINARYTOXINA | 30 | 0.033 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00465 | SALSPVBPROT | 60 | 7e-11 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00470 | CHANLCOLICIN | 35 | 0.002 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_00515 | YERSSTKINASE | 35 | 0.003 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 4 | E4F39_01190 | E4F39_01350 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_01190 | 2 | 12 | 2.478097 | LysR family transcriptional regulator | |
| E4F39_01195 | -1 | 17 | 2.878920 | tRNA 2-selenouridine(34) synthase MnmH | |
| E4F39_01205 | -1 | 9 | 2.906856 | hypothetical protein | |
| E4F39_01210 | 0 | 11 | 3.207412 | nitrate/sulfonate/bicarbonate ABC transporter | |
| E4F39_01215 | -1 | 10 | 3.292059 | ABC transporter permease subunit | |
| E4F39_01220 | 0 | 11 | 2.903917 | hypothetical protein | |
| E4F39_01225 | 0 | 10 | 3.151241 | hypothetical protein | |
| E4F39_01230 | -1 | 11 | 2.948334 | erythromycin esterase family protein | |
| E4F39_01235 | 0 | 15 | 3.095646 | hydrolase | |
| E4F39_01240 | 0 | 13 | 3.535794 | nicotinate phosphoribosyltransferase | |
| E4F39_01245 | 0 | 9 | 2.630988 | histidine kinase | |
| E4F39_01255 | -1 | 11 | 3.790713 | phosphoribosyltransferase | |
| E4F39_01260 | -1 | 10 | 4.234673 | glycosyl transferase family 51 | |
| E4F39_01265 | -2 | 9 | 3.235675 | hypothetical protein | |
| E4F39_01270 | -2 | 9 | 3.544147 | cytochrome c | |
| E4F39_01275 | -1 | 10 | 3.809774 | cytochrome c oxidase subunit I | |
| E4F39_01280 | -1 | 10 | 3.882510 | cytochrome c oxidase subunit II | |
| E4F39_01285 | -1 | 10 | 3.580094 | thiamine pyrophosphate-requiring protein | |
| E4F39_01295 | 0 | 12 | 4.152309 | mandelate racemase | |
| E4F39_01305 | 0 | 10 | 4.536266 | hypothetical protein | |
| E4F39_01310 | 0 | 9 | 4.732291 | gluconate 2-dehydrogenase subunit 3 family | |
| E4F39_01315 | 0 | 9 | 3.465641 | GMC family oxidoreductase | |
| E4F39_01320 | 0 | 9 | 2.350074 | type VI secretion system baseplate subunit TssF | |
| E4F39_01325 | 0 | 11 | 1.679183 | hypothetical protein | |
| E4F39_01330 | -1 | 12 | 0.175671 | penicillin acylase family protein | |
| E4F39_01335 | -1 | 11 | 0.039452 | LysR family transcriptional regulator | |
| E4F39_01340 | -1 | 14 | -2.608996 | response regulator | |
| E4F39_01345 | 0 | 17 | -2.465047 | oxidoreductase | |
| E4F39_01350 | -1 | 20 | -3.016105 | response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01345 | HTHFIS | 58 | 8e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01355 | HTHFIS | 38 | 5e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 5 | E4F39_01400 | E4F39_01525 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_01400 | 2 | 16 | -1.859803 | lipocalin-like domain-containing protein | |
| E4F39_01405 | 0 | 14 | -2.811228 | DMT family transporter | |
| E4F39_01410 | 0 | 14 | -4.060041 | mandelate racemase | |
| E4F39_01415 | -1 | 19 | -5.207213 | hypothetical protein | |
| E4F39_01420 | -1 | 18 | -5.442219 | response regulator transcription factor | |
| E4F39_01425 | -2 | 15 | -3.945018 | 3-phosphoshikimate 1-carboxyvinyltransferase | |
| E4F39_01430 | -2 | 13 | -3.224126 | hypothetical protein | |
| E4F39_01435 | -1 | 13 | -3.181988 | hypothetical protein | |
| E4F39_01440 | 0 | 11 | -1.133704 | *MFS transporter | |
| E4F39_01450 | -1 | 9 | -0.455382 | HAMP domain-containing protein | |
| E4F39_01455 | 1 | 11 | -0.505270 | response regulator transcription factor | |
| E4F39_01460 | 2 | 14 | -1.864030 | recombinase RecA | |
| E4F39_01470 | 2 | 16 | -0.849556 | recombination regulator RecX | |
| E4F39_01475 | -2 | 14 | -1.086044 | DUF2889 domain-containing protein | |
| E4F39_01480 | -2 | 14 | -1.342775 | ADP-forming succinate--CoA ligase subunit beta | |
| E4F39_01485 | -2 | 10 | -0.418433 | succinate--CoA ligase subunit alpha | |
| E4F39_01490 | -2 | 9 | 0.284476 | TerC family protein | |
| E4F39_01495 | 0 | 12 | 0.459820 | pilin | |
| E4F39_01500 | -1 | 13 | -0.009585 | polymerase | |
| E4F39_01505 | 3 | 19 | -0.363401 | hypothetical protein | |
| E4F39_01510 | 2 | 11 | 2.354328 | hypothetical protein | |
| E4F39_01515 | 0 | 11 | 3.106653 | DUF2501 domain-containing protein | |
| E4F39_01520 | -1 | 13 | 3.559757 | TonB family protein | |
| E4F39_01525 | -2 | 12 | 3.175458 | cyclic pyranopterin monophosphate synthase MoaC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01450 | TCRTETA | 35 | 8e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01455 | PF06580 | 48 | 5e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01460 | HTHFIS | 99 | 6e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01495 | BCTERIALGSPG | 41 | 6e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01500 | PF06580 | 29 | 0.046 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01525 | PF03544 | 39 | 1e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 6 | E4F39_01785 | E4F39_01855 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_01785 | 0 | 11 | 3.180584 | sn-glycerol-3-phosphate ABC transporter | |
| E4F39_01790 | 0 | 12 | 3.803566 | hypothetical protein | |
| E4F39_01795 | 0 | 12 | 4.510914 | haloacid dehalogenase-like hydrolase | |
| E4F39_01800 | -1 | 14 | 4.457561 | LysR family transcriptional regulator | |
| E4F39_01805 | 0 | 14 | 5.341761 | serine hydrolase | |
| E4F39_01815 | 0 | 15 | 5.384680 | MFS transporter | |
| E4F39_01820 | 0 | 14 | 4.927766 | sugar-binding transcriptional regulator | |
| E4F39_01825 | 1 | 14 | 5.212913 | xylulokinase | |
| E4F39_01830 | 1 | 13 | 4.937496 | mannitol dehydrogenase family protein | |
| E4F39_01835 | 0 | 13 | 5.199284 | LysR family transcriptional regulator | |
| E4F39_01840 | 1 | 13 | 4.436662 | benzoylformate decarboxylase | |
| E4F39_01845 | 2 | 13 | 3.801917 | aldehyde dehydrogenase | |
| E4F39_01850 | 3 | 13 | 3.621989 | 2-dehydropantoate 2-reductase | |
| E4F39_01855 | 2 | 12 | 2.579494 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01790 | PF05272 | 30 | 0.017 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01800 | PF06776 | 30 | 0.020 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01810 | BLACTAMASEA | 30 | 0.019 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01815 | TCRTETB | 35 | 4e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 7 | E4F39_02085 | E4F39_02225 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_02085 | 0 | 13 | 4.391134 | chromate efflux transporter | |
| E4F39_02090 | -1 | 15 | 4.069426 | Crp/Fnr family transcriptional regulator | |
| E4F39_02095 | 0 | 17 | 3.234062 | DUF962 domain-containing protein | |
| E4F39_02100 | -1 | 16 | 3.861026 | 2-dehydropantoate 2-reductase | |
| E4F39_02105 | 0 | 10 | 3.137674 | hypothetical protein | |
| E4F39_02110 | -1 | 16 | 2.646212 | 3-oxoacyl-ACP reductase | |
| E4F39_02115 | 0 | 12 | 1.243216 | molecular chaperone GroEL | |
| E4F39_02120 | 0 | 11 | 1.668477 | class I SAM-dependent methyltransferase | |
| E4F39_02125 | 0 | 10 | 3.030598 | EAL domain-containing protein | |
| E4F39_02130 | -1 | 11 | 2.932978 | DHA2 family efflux MFS transporter permease | |
| E4F39_02135 | -3 | 13 | 2.500627 | DUF2917 domain-containing protein | |
| E4F39_02140 | 1 | 9 | 1.934606 | helix-turn-helix domain-containing protein | |
| E4F39_02150 | 2 | 12 | 2.824114 | GntR family transcriptional regulator | |
| E4F39_02155 | 6 | 33 | 2.387351 | aldo/keto reductase | |
| E4F39_02160 | 6 | 34 | 2.105923 | hypothetical protein | |
| E4F39_02165 | 9 | 39 | 2.909920 | hypothetical protein | |
| E4F39_02170 | 13 | 47 | 3.871856 | hypothetical protein | |
| E4F39_02175 | 6 | 26 | 1.084925 | molybdenum cofactor biosynthesis protein A | |
| E4F39_02180 | 6 | 25 | 1.530236 | 2-dehydropantoate 2-reductase | |
| E4F39_02185 | 1 | 12 | -0.510870 | elongation factor G | |
| E4F39_02190 | 1 | 12 | -1.165052 | hypothetical protein | |
| E4F39_02195 | 2 | 13 | -0.359306 | DUF192 domain-containing protein | |
| E4F39_02200 | 2 | 16 | -2.483582 | hypothetical protein | |
| E4F39_02205 | 2 | 20 | -1.900660 | pseudouridine synthase | |
| E4F39_02210 | -1 | 12 | -0.884710 | NADP-dependent isocitrate dehydrogenase | |
| E4F39_02215 | 1 | 11 | -1.514963 | GNAT family acetyltransferase | |
| E4F39_02220 | 0 | 7 | -2.023055 | multicopper oxidase family protein | |
| E4F39_02225 | -1 | 8 | -3.226392 | cold-shock protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02140 | TCRTETB | 138 | 3e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02180 | cloacin | 46 | 3e-07 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02200 | TCRTETOQM | 624 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02215 | CHLAMIDIAOM6 | 25 | 0.024 | Chlamydia cysteine-rich outer membrane protein 6 si... | |
>CHLAMIDIAOM6#Chlamydia cysteine-rich outer membrane protein 6 | |||||
| 8 | E4F39_02585 | E4F39_02660 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_02585 | 1 | 24 | 3.526167 | iron ABC transporter permease | |
| E4F39_02590 | 3 | 22 | 4.320206 | ABC transporter ATP-binding protein | |
| E4F39_02595 | 6 | 16 | 6.236330 | nicotinate-nucleotide--dimethylbenzimidazole | |
| E4F39_02600 | 2 | 15 | 3.611697 | adenosylcobinamide-GDP ribazoletransferase | |
| E4F39_02605 | 2 | 15 | 3.053553 | alpha-ribazole phosphatase | |
| E4F39_02610 | 1 | 14 | 3.679022 | hypothetical protein | |
| E4F39_02615 | 1 | 14 | 4.515976 | hypothetical protein | |
| E4F39_02620 | -1 | 15 | 4.307254 | cobalamin-binding protein | |
| E4F39_02625 | -2 | 13 | 4.178113 | threonine-phosphate decarboxylase | |
| E4F39_02630 | -1 | 13 | 5.585433 | cobalamin biosynthesis protein | |
| E4F39_02635 | -1 | 13 | 5.019919 | bifunctional adenosylcobinamide | |
| E4F39_02640 | -1 | 13 | 3.392080 | cobyric acid synthase | |
| E4F39_02645 | -1 | 12 | 1.533144 | DoxX family protein | |
| E4F39_02650 | -2 | 12 | 0.835484 | ParA family protein | |
| E4F39_02655 | 0 | 11 | -1.263547 | aspartate 1-decarboxylase | |
| E4F39_02660 | 2 | 11 | -2.190617 | pantoate--beta-alanine ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02630 | FERRIBNDNGPP | 40 | 8e-06 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 9 | E4F39_02985 | E4F39_03190 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_02985 | 2 | 15 | 2.056074 | MFS transporter | |
| E4F39_02990 | 0 | 13 | 1.580792 | YbhB/YbcL family Raf kinase inhibitor-like | |
| E4F39_02995 | 0 | 15 | 2.326278 | hypothetical protein | |
| E4F39_03000 | 0 | 15 | 1.935414 | hypothetical protein | |
| E4F39_03005 | 2 | 15 | 1.387960 | hypothetical protein | |
| E4F39_03010 | 1 | 17 | 1.019428 | hypothetical protein | |
| E4F39_03015 | 7 | 25 | 0.254219 | hypothetical protein | |
| E4F39_03020 | 7 | 24 | 0.414998 | serine protease inhibitor ecotin | |
| E4F39_03025 | 6 | 18 | 1.001503 | D-alanyl-D-alanine carboxypeptidase | |
| E4F39_03030 | 6 | 19 | 0.698832 | hypothetical protein | |
| E4F39_03040 | 5 | 18 | 0.476473 | hypothetical protein | |
| E4F39_03050 | 3 | 20 | -1.858412 | hypothetical protein | |
| E4F39_03055 | 9 | 29 | -6.527529 | hypothetical protein | |
| E4F39_03060 | 9 | 30 | -7.010306 | hypothetical protein | |
| E4F39_03065 | 10 | 30 | -7.283479 | filamentous hemagglutinin N-terminal | |
| E4F39_03070 | 9 | 29 | -7.212695 | hypothetical protein | |
| E4F39_03075 | 10 | 30 | -7.358293 | hypothetical protein | |
| E4F39_03080 | 10 | 29 | -7.331005 | ShlB/FhaC/HecB family hemolysin | |
| E4F39_03085 | 7 | 34 | -9.098462 | hypothetical protein | |
| E4F39_03090 | 8 | 43 | -8.339490 | hypothetical protein | |
| E4F39_03095 | 7 | 42 | -8.276806 | integrase | |
| E4F39_03105 | 5 | 52 | -8.869772 | hypothetical protein | |
| E4F39_03110 | 5 | 51 | -8.430287 | DUF2778 domain-containing protein | |
| E4F39_03115 | 5 | 53 | -8.310678 | *hypothetical protein | |
| E4F39_03120 | 2 | 29 | -6.444562 | hypothetical protein | |
| E4F39_03125 | 1 | 28 | -6.081756 | hypothetical protein | |
| E4F39_03130 | 1 | 29 | -5.812762 | hypothetical protein | |
| E4F39_03145 | 2 | 35 | -4.603741 | hypothetical protein | |
| E4F39_03150 | 4 | 35 | -3.293431 | translation initiation factor IF-1 | |
| E4F39_03155 | 3 | 30 | -3.057445 | alpha/beta fold hydrolase | |
| E4F39_03160 | 3 | 27 | -2.587976 | DUF2306 domain-containing protein | |
| E4F39_03165 | 4 | 28 | -2.765574 | rubredoxin | |
| E4F39_03170 | 2 | 27 | -2.991229 | DUF4399 domain-containing protein | |
| E4F39_03175 | 0 | 15 | -1.205181 | ATP-binding cassette domain-containing protein | |
| E4F39_03185 | 2 | 11 | -0.618302 | DNA topoisomerase IV subunit B | |
| E4F39_03190 | 2 | 11 | 0.071148 | DNA topoisomerase IV subunit A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03010 | TCRTETB | 116 | 2e-30 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03040 | cloacin | 29 | 0.006 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03080 | PF05860 | 65 | 3e-14 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03095 | IGASERPTASE | 33 | 0.005 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03195 | PF06917 | 27 | 0.033 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03210 | GPOSANCHOR | 31 | 0.024 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 10 | E4F39_03535 | E4F39_03690 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_03535 | 2 | 19 | 0.495499 | hypothetical protein | |
| E4F39_03540 | -1 | 14 | 1.072478 | FUSC family protein | |
| E4F39_03545 | -2 | 14 | 2.126862 | hypothetical protein | |
| E4F39_03550 | -2 | 12 | 2.342320 | MFS transporter | |
| E4F39_03555 | 0 | 12 | 2.951959 | hypothetical protein | |
| E4F39_03560 | -1 | 13 | 3.224037 | carboxymuconolactone decarboxylase family | |
| E4F39_03565 | -2 | 15 | 2.571263 | RNA polymerase sigma-70 factor | |
| E4F39_03570 | -1 | 19 | 2.517854 | hypothetical protein | |
| E4F39_03575 | -2 | 17 | 0.578940 | hypothetical protein | |
| E4F39_03580 | 0 | 21 | 1.915810 | hypothetical protein | |
| E4F39_03585 | -1 | 24 | 1.258398 | glycosyltransferase | |
| E4F39_03590 | 1 | 28 | 1.297409 | chemotaxis protein | |
| E4F39_03595 | 2 | 29 | 2.343599 | hypothetical protein | |
| E4F39_03600 | 2 | 32 | 2.112874 | phospholipase C accessory protein PlcR | |
| E4F39_03605 | 2 | 33 | 2.578560 | pectinacetylesterase | |
| E4F39_03610 | 0 | 23 | 0.411246 | purine permease | |
| E4F39_03615 | 0 | 14 | 0.199822 | ribonuclease G | |
| E4F39_03620 | 1 | 16 | 0.093988 | septum formation inhibitor Maf | |
| E4F39_03630 | 1 | 10 | -0.414425 | 23S rRNA | |
| E4F39_03635 | 1 | 10 | -0.413162 | ribosome silencing factor | |
| E4F39_03640 | 3 | 13 | 0.548650 | nicotinate-nucleotide adenylyltransferase | |
| E4F39_03645 | 0 | 15 | 1.673265 | oxygen-dependent coproporphyrinogen oxidase | |
| E4F39_03650 | -1 | 16 | 1.547951 | phosphoribosylamine--glycine ligase | |
| E4F39_03655 | -3 | 16 | 2.537795 | YebC/PmpR family DNA-binding transcriptional | |
| E4F39_03660 | -3 | 15 | 1.107998 | uracil phosphoribosyltransferase | |
| E4F39_03665 | -1 | 16 | 1.593356 | SDR family oxidoreductase | |
| E4F39_03670 | -2 | 15 | 1.198947 | methylglyoxal synthase | |
| E4F39_03680 | 1 | 14 | 1.012939 | hypothetical protein | |
| E4F39_03685 | 2 | 12 | 1.358684 | hypothetical protein | |
| E4F39_03690 | 3 | 16 | 2.419877 | quinone oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03565 | TCRTETA | 61 | 3e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03570 | PF03544 | 31 | 0.004 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03670 | LPSBIOSNTHSS | 39 | 4e-06 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03700 | DHBDHDRGNASE | 78 | 2e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 11 | E4F39_03755 | E4F39_03880 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_03755 | 0 | 14 | 3.840081 | globin | |
| E4F39_03760 | -2 | 11 | 3.400188 | globin | |
| E4F39_03765 | 0 | 11 | 3.237413 | alanyl-tRNA editing protein | |
| E4F39_03770 | -1 | 10 | 3.374291 | DUF924 domain-containing protein | |
| E4F39_03775 | 0 | 12 | 3.793728 | amidase | |
| E4F39_03780 | -1 | 11 | 4.355490 | MFS transporter | |
| E4F39_03785 | 0 | 11 | 3.019566 | glycosyl transferase | |
| E4F39_03790 | -3 | 8 | 3.243506 | hypothetical protein | |
| E4F39_03795 | -3 | 7 | 3.172285 | TIGR00730 family Rossman fold protein | |
| E4F39_03800 | -3 | 8 | 3.544279 | TetR/AcrR family transcriptional regulator | |
| E4F39_03805 | -3 | 9 | 2.948217 | diacylglycerol kinase | |
| E4F39_03810 | -4 | 9 | 0.919511 | glycosyltransferase family 1 protein | |
| E4F39_03815 | -4 | 11 | 0.604631 | UDP-2,3-diacylglucosamine diphosphatase | |
| E4F39_03825 | -1 | 11 | -0.623169 | RDD family protein | |
| E4F39_03830 | 0 | 17 | -0.894408 | DUF3106 domain-containing protein | |
| E4F39_03840 | 1 | 17 | 1.673169 | DUF3619 family protein | |
| E4F39_03845 | 1 | 17 | 0.561252 | RNA polymerase sigma factor | |
| E4F39_03850 | 3 | 18 | 0.215790 | acetolactate synthase | |
| E4F39_03855 | -1 | 14 | -1.112193 | acetolactate synthase 3 catalytic subunit | |
| E4F39_03860 | -1 | 13 | -2.757021 | acetolactate synthase small subunit | |
| E4F39_03865 | 0 | 12 | -3.701095 | ketol-acid reductoisomerase | |
| E4F39_03870 | -1 | 13 | -4.284048 | phosphatidylserine decarboxylase | |
| E4F39_03880 | 0 | 14 | -3.270129 | CDP-diacylglycerol--serine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03810 | TCRTETA | 34 | 7e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_03835 | HTHTETR | 60 | 4e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 12 | E4F39_03955 | E4F39_04030 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_03955 | 0 | 11 | -3.469949 | NADH-quinone oxidoreductase subunit B | |
| E4F39_03960 | -1 | 13 | -5.437197 | NADH-quinone oxidoreductase subunit C | |
| E4F39_03970 | -1 | 12 | -4.881259 | NADH-quinone oxidoreductase subunit D | |
| E4F39_03975 | -1 | 14 | -2.615384 | NADH-quinone oxidoreductase subunit NuoE | |
| E4F39_03980 | -1 | 16 | -2.953344 | NADH oxidoreductase (quinone) subunit F | |
| E4F39_03985 | -1 | 16 | -3.032230 | NADH-quinone oxidoreductase subunit G | |
| E4F39_03990 | 0 | 16 | -2.482883 | NADH-quinone oxidoreductase subunit NuoH | |
| E4F39_04000 | 1 | 17 | -3.259545 | NADH-quinone oxidoreductase subunit NuoI | |
| E4F39_04005 | 1 | 19 | -5.200924 | NADH-quinone oxidoreductase subunit J | |
| E4F39_04010 | 1 | 18 | -4.667521 | NADH-quinone oxidoreductase subunit NuoK | |
| E4F39_04015 | 0 | 19 | -4.595770 | NADH-quinone oxidoreductase subunit L | |
| E4F39_04020 | 0 | 18 | -4.788068 | NADH-quinone oxidoreductase subunit M | |
| E4F39_04025 | -1 | 18 | -4.160983 | NADH-quinone oxidoreductase subunit NuoN | |
| E4F39_04030 | -3 | 15 | -3.432314 | DUF2818 family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04005 | OUTRMMBRANEA | 30 | 0.013 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| 13 | E4F39_04135 | E4F39_04220 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_04135 | 2 | 24 | -3.026905 | response regulator transcription factor | |
| E4F39_04140 | 4 | 29 | -4.930779 | DUF2863 family protein | |
| E4F39_04145 | 4 | 37 | -6.914597 | hypothetical protein | |
| E4F39_04150 | 2 | 32 | -6.646645 | hypothetical protein | |
| E4F39_04155 | 3 | 24 | -6.124507 | phenylacetate-CoA oxygenase | |
| E4F39_04160 | 0 | 19 | -5.417697 | **M24 family metallopeptidase | |
| E4F39_04180 | 1 | 14 | -4.253115 | fatty acid desaturase | |
| E4F39_04190 | 1 | 14 | -3.961415 | AraC family transcriptional regulator | |
| E4F39_04200 | 1 | 14 | -3.033311 | phosphoglycerate dehydrogenase | |
| E4F39_04205 | 1 | 13 | -3.015981 | hypothetical protein | |
| E4F39_04210 | 1 | 15 | -1.883169 | transposase | |
| E4F39_04215 | 2 | 20 | -0.829231 | hypothetical protein | |
| E4F39_04220 | 4 | 30 | -0.095613 | sulfonate ABC transporter substrate-binding |
| 14 | E4F39_04315 | E4F39_04510 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_04315 | 2 | 15 | -0.007630 | hypothetical protein | |
| E4F39_04320 | 2 | 15 | 0.453123 | transport system membrane protein | |
| E4F39_04325 | 2 | 14 | 0.589365 | MdtB/MuxB family multidrug efflux RND | |
| E4F39_04330 | 2 | 13 | 0.550299 | MdtA/MuxA family multidrug efflux RND | |
| E4F39_04335 | 1 | 16 | 0.135772 | IclR family transcriptional regulator | |
| E4F39_04340 | 0 | 11 | -0.109662 | DUF839 domain-containing protein | |
| E4F39_04345 | 1 | 12 | 1.145070 | hypothetical protein | |
| E4F39_04350 | 1 | 12 | 1.242164 | hypothetical protein | |
| E4F39_04355 | 0 | 12 | 1.189147 | NAD-dependent epimerase/dehydratase family | |
| E4F39_04360 | 0 | 13 | 1.283625 | hypothetical protein | |
| E4F39_04365 | 2 | 19 | 3.333867 | cysteine dioxygenase | |
| E4F39_04370 | -3 | 13 | 3.476182 | Lrp/AsnC family transcriptional regulator | |
| E4F39_04375 | -1 | 10 | 2.932966 | ABC transporter ATP-binding protein | |
| E4F39_04380 | 0 | 12 | 4.320342 | iron ABC transporter permease | |
| E4F39_04385 | -1 | 12 | 3.855384 | Fe(3+) ABC transporter substrate-binding | |
| E4F39_04390 | -1 | 12 | 3.573147 | penicillin-binding protein | |
| E4F39_04395 | -1 | 14 | 2.877626 | hypothetical protein | |
| E4F39_04400 | 0 | 16 | 2.748636 | amino acid permease | |
| E4F39_04405 | -1 | 16 | 2.228486 | rod shape-determining protein MreB | |
| E4F39_04410 | -1 | 14 | -0.718441 | hypothetical protein | |
| E4F39_04415 | -2 | 12 | -0.397294 | exodeoxyribonuclease V subunit gamma | |
| E4F39_04420 | 0 | 12 | 2.460883 | exodeoxyribonuclease V subunit beta | |
| E4F39_04425 | 1 | 11 | 3.336562 | exodeoxyribonuclease V subunit alpha | |
| E4F39_04430 | 0 | 9 | 4.490559 | aminoacyl-tRNA hydrolase | |
| E4F39_04435 | 0 | 9 | 4.482042 | EAL domain-containing protein | |
| E4F39_04440 | 0 | 8 | 5.207088 | hypothetical protein | |
| E4F39_04445 | 0 | 9 | 4.936493 | glycine zipper 2TM domain-containing protein | |
| E4F39_04450 | 0 | 9 | 4.422525 | phosphomethylpyrimidine synthase ThiC | |
| E4F39_04455 | 1 | 8 | 3.737907 | pentapeptide MXKDX repeat protein | |
| E4F39_04460 | -3 | 12 | 0.209038 | DUF1223 domain-containing protein | |
| E4F39_04465 | -2 | 12 | 0.195469 | cytochrome b/b6 domain-containing protein | |
| E4F39_04475 | -1 | 11 | -0.979073 | molybdopterin-binding protein | |
| E4F39_04485 | -1 | 11 | -0.554627 | hypothetical protein | |
| E4F39_04490 | 0 | 11 | 0.235545 | hypothetical protein | |
| E4F39_04495 | -1 | 10 | -0.235699 | EamA family transporter | |
| E4F39_04500 | 3 | 14 | 0.903692 | MFS transporter | |
| E4F39_04505 | 2 | 13 | 0.726713 | hypothetical protein | |
| E4F39_04510 | 2 | 12 | 2.054816 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04335 | ACRIFLAVINRP | 745 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04340 | ACRIFLAVINRP | 802 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04345 | RTXTOXIND | 48 | 4e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04380 | NUCEPIMERASE | 33 | 5e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04495 | CHLAMIDIAOM6 | 32 | 0.007 | Chlamydia cysteine-rich outer membrane protein 6 si... | |
>CHLAMIDIAOM6#Chlamydia cysteine-rich outer membrane protein 6 | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04530 | ACETATEKNASE | 27 | 0.003 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04545 | TCRTETA | 45 | 3e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 15 | E4F39_04620 | E4F39_04720 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_04620 | 3 | 20 | 2.372948 | FMN-binding negative transcriptional regulator | |
| E4F39_04625 | 3 | 24 | 1.174080 | PLP-dependent aminotransferase family protein | |
| E4F39_04630 | 3 | 23 | 1.078309 | Lrp/AsnC family transcriptional regulator | |
| E4F39_04635 | 0 | 14 | -0.479711 | flagellar hook-basal body protein FliE | |
| E4F39_04640 | -1 | 16 | -0.279218 | glutamine--fructose-6-phosphate transaminase | |
| E4F39_04650 | -2 | 12 | 0.331919 | carotenoid oxygenase | |
| E4F39_04655 | -2 | 11 | 0.362692 | DUF2239 family protein | |
| E4F39_04660 | 0 | 9 | 1.713041 | LysR family transcriptional regulator | |
| E4F39_04665 | 0 | 11 | 2.909497 | SDR family oxidoreductase | |
| E4F39_04670 | -2 | 10 | 2.689353 | hypothetical protein | |
| E4F39_04680 | 2 | 12 | 1.856853 | DUF934 domain-containing protein | |
| E4F39_04685 | 3 | 14 | 2.093932 | nitrite/sulfite reductase | |
| E4F39_04690 | 4 | 14 | 1.390395 | hypothetical protein | |
| E4F39_04695 | 4 | 10 | 2.303049 | DUF2970 domain-containing protein | |
| E4F39_04700 | 4 | 11 | 2.493712 | PLP-dependent aminotransferase family protein | |
| E4F39_04705 | 3 | 11 | 2.652836 | hypothetical protein | |
| E4F39_04710 | 1 | 14 | 3.696615 | Hsp20/alpha crystallin family protein | |
| E4F39_04715 | 1 | 13 | 3.998042 | Hsp20/alpha crystallin family protein | |
| E4F39_04720 | 1 | 17 | 3.829860 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04730 | DHBDHDRGNASE | 68 | 1e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 16 | E4F39_04770 | E4F39_04940 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_04770 | 3 | 18 | 0.872897 | hypothetical protein | |
| E4F39_04775 | 6 | 18 | 1.875054 | malonate decarboxylase subunit alpha | |
| E4F39_04785 | -1 | 10 | 0.305130 | malonate decarboxylase acyl carrier protein | |
| E4F39_04795 | -3 | 11 | 1.318674 | biotin-independent malonate decarboxylase | |
| E4F39_04805 | -2 | 14 | 1.672993 | biotin-independent malonate decarboxylase | |
| E4F39_04810 | -1 | 15 | 2.197293 | malonate decarboxylase | |
| E4F39_04815 | -1 | 17 | 2.944016 | hypothetical protein | |
| E4F39_04820 | 0 | 14 | 3.072284 | hypothetical protein | |
| E4F39_04830 | 2 | 15 | 3.490194 | alpha/beta fold hydrolase | |
| E4F39_04835 | 3 | 15 | 3.956604 | glutathione S-transferase | |
| E4F39_04840 | 1 | 16 | 4.289817 | hypothetical protein | |
| E4F39_04845 | 1 | 15 | 3.924144 | hypothetical protein | |
| E4F39_04850 | 4 | 19 | 5.794690 | glycine betaine/L-proline transporter ProP | |
| E4F39_04855 | 3 | 19 | 6.415780 | proline/betaine transporter | |
| E4F39_04860 | 3 | 19 | 5.891801 | YnfA family protein | |
| E4F39_04865 | 5 | 20 | 5.782584 | DNA polymerase III subunit epsilon | |
| E4F39_04875 | 6 | 22 | 5.890858 | ribonuclease HI | |
| E4F39_04880 | 2 | 19 | 3.993669 | class I SAM-dependent methyltransferase | |
| E4F39_04885 | 1 | 25 | 1.830769 | hydroxyacylglutathione hydrolase | |
| E4F39_04890 | -2 | 26 | 1.136713 | LysM peptidoglycan-binding domain-containing | |
| E4F39_04895 | 1 | 26 | 0.533721 | MFS transporter | |
| E4F39_04900 | 1 | 23 | 1.258982 | hypothetical protein | |
| E4F39_04905 | -1 | 11 | 1.601556 | flagellar hook capping protein | |
| E4F39_04910 | -1 | 15 | 0.367694 | AraC family transcriptional regulator | |
| E4F39_04915 | -1 | 12 | 0.754176 | hypothetical protein | |
| E4F39_04920 | 4 | 21 | 0.100745 | carbamoyl-phosphate synthase small subunit | |
| E4F39_04925 | 1 | 16 | -0.080947 | leucine efflux protein LeuE | |
| E4F39_04930 | 2 | 16 | -0.684638 | carbamoyl-phosphate synthase large subunit | |
| E4F39_04935 | 5 | 19 | -1.628129 | transcription elongation factor GreA | |
| E4F39_04940 | 3 | 17 | 0.331996 | DUF4149 domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04845 | ADHESNFAMILY | 30 | 0.019 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04930 | TCRTETA | 49 | 2e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04975 | TCRTETA | 37 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 17 | E4F39_05050 | E4F39_05130 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_05050 | -1 | 12 | -3.484644 | hypothetical protein | |
| E4F39_05055 | -1 | 13 | -3.288581 | phosphatase PAP2 family protein | |
| E4F39_05060 | 2 | 11 | -2.910729 | hypothetical protein | |
| E4F39_05065 | 1 | 11 | -2.326234 | hypothetical protein | |
| E4F39_05075 | 0 | 9 | -1.901835 | DUF4102 domain-containing protein | |
| E4F39_05080 | -2 | 8 | -1.080831 | hypothetical protein | |
| E4F39_05085 | -3 | 7 | -0.227686 | DUF2778 domain-containing protein | |
| E4F39_05090 | -2 | 9 | -0.156494 | *phosphohistidine phosphatase SixA | |
| E4F39_05095 | -2 | 9 | -0.626371 | GNAT family N-acetyltransferase | |
| E4F39_05105 | 3 | 22 | -0.183839 | hypothetical protein | |
| E4F39_05110 | 2 | 26 | -1.429546 | lipoprotein | |
| E4F39_05115 | 1 | 33 | -4.981213 | polyphosphate kinase | |
| E4F39_05120 | 0 | 33 | -4.225479 | MATE family efflux transporter | |
| E4F39_05125 | 0 | 23 | -3.574794 | DUF2288 domain-containing protein | |
| E4F39_05130 | 1 | 21 | -3.329231 | AMP-dependent synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05155 | AUTOINDCRSYN | 34 | 3e-04 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 18 | E4F39_05205 | E4F39_05410 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_05205 | 6 | 27 | -6.412352 | SAM-dependent methyltransferase | |
| E4F39_05210 | 4 | 26 | -5.553901 | PLP-dependent aminotransferase family protein | |
| E4F39_05220 | 1 | 29 | -5.037564 | hypothetical protein | |
| E4F39_05225 | 0 | 27 | -3.623349 | flavodoxin family protein | |
| E4F39_05230 | 1 | 29 | -3.623349 | hypothetical protein | |
| E4F39_05235 | 1 | 24 | -1.238455 | malto-oligosyltrehalose synthase | |
| E4F39_05240 | 1 | 22 | -0.402115 | malto-oligosyltrehalose trehalohydrolase | |
| E4F39_05245 | 1 | 21 | -0.976995 | glycogen debranching enzyme GlgX | |
| E4F39_05250 | 2 | 22 | -1.114802 | 1,4-alpha-glucan branching protein GlgB | |
| E4F39_05255 | 3 | 24 | -1.447868 | maltose alpha-D-glucosyltransferase | |
| E4F39_05260 | 1 | 13 | 1.421561 | alpha-1,4-glucan--maltose-1-phosphate | |
| E4F39_05270 | 3 | 11 | 5.248865 | hypothetical protein | |
| E4F39_05280 | 0 | 8 | 5.509293 | deoxyribodipyrimidine photolyase | |
| E4F39_05285 | 0 | 8 | 4.807850 | PHB depolymerase family esterase | |
| E4F39_05295 | -1 | 12 | 4.039289 | hypothetical protein | |
| E4F39_05305 | -1 | 9 | 3.315262 | hypothetical protein | |
| E4F39_05315 | 2 | 11 | 2.920340 | hypothetical protein | |
| E4F39_05320 | 8 | 23 | -1.239162 | hypothetical protein | |
| E4F39_05330 | 5 | 25 | -3.505882 | hypothetical protein | |
| E4F39_05335 | 3 | 58 | -1.569343 | LysR family transcriptional regulator | |
| E4F39_05340 | -1 | 43 | -1.268320 | DUF3955 domain-containing protein | |
| E4F39_05345 | -1 | 37 | -1.550708 | hypothetical protein | |
| E4F39_05350 | -2 | 35 | -0.827294 | hypothetical protein | |
| E4F39_05355 | -2 | 34 | -0.740981 | IMP dehydrogenase | |
| E4F39_05360 | -1 | 34 | -0.638096 | response regulator transcription factor | |
| E4F39_05370 | 0 | 19 | -3.294551 | hemagglutinin | |
| E4F39_05375 | 5 | 28 | -4.366672 | OmpA family protein | |
| E4F39_05380 | 3 | 15 | -0.959753 | hypothetical protein | |
| E4F39_05385 | 2 | 14 | -0.384129 | H-NS histone family protein | |
| E4F39_05390 | 1 | 12 | 0.024437 | hypothetical protein | |
| E4F39_05395 | 1 | 12 | 0.051721 | SCO family protein | |
| E4F39_05400 | 1 | 11 | 0.646578 | hypothetical protein | |
| E4F39_05405 | 2 | 10 | 1.080241 | DUF1929 domain-containing protein | |
| E4F39_05410 | 2 | 12 | 1.783938 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05305 | PRTACTNFAMLY | 30 | 0.031 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05330 | PF07675 | 31 | 0.011 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05395 | HTHFIS | 82 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05405 | PF03895 | 39 | 4e-06 | Serum resistance protein DsrA. | |
>PF03895#Serum resistance protein DsrA. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05410 | OUTRMMBRANEA | 127 | 2e-37 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| 19 | E4F39_05480 | E4F39_05665 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_05480 | 2 | 17 | -1.019721 | lipoprotein | |
| E4F39_05485 | 6 | 25 | -4.179049 | paar motif family protein | |
| E4F39_05490 | 2 | 19 | -3.114315 | hypothetical protein | |
| E4F39_05495 | 5 | 29 | -5.979724 | type VI secretion system tip protein VgrG | |
| E4F39_05500 | 5 | 31 | -6.944393 | hypothetical protein | |
| E4F39_05505 | 5 | 32 | -6.983254 | hypothetical protein | |
| E4F39_05510 | 4 | 29 | -5.655405 | hypothetical protein | |
| E4F39_05515 | 1 | 20 | -3.174192 | divalent metal cation transporter | |
| E4F39_05520 | 1 | 23 | -0.783679 | hypothetical protein | |
| E4F39_05525 | 0 | 21 | -1.226834 | alkaline phosphatase | |
| E4F39_05530 | 5 | 36 | -6.304908 | hypothetical protein | |
| E4F39_05535 | 5 | 35 | -6.302564 | lipoprotein | |
| E4F39_05540 | 4 | 31 | -5.697652 | H-NS histone family protein | |
| E4F39_05545 | 4 | 32 | -5.731087 | hypothetical protein | |
| E4F39_05550 | 6 | 44 | -9.837335 | hydrolase | |
| E4F39_05560 | 1 | 26 | -2.212879 | MFS transporter | |
| E4F39_05565 | 1 | 24 | -1.457057 | hypothetical protein | |
| E4F39_05570 | 7 | 38 | -2.677057 | LysR family transcriptional regulator | |
| E4F39_05575 | 3 | 25 | -1.390085 | hypothetical protein | |
| E4F39_05580 | 0 | 15 | -1.277721 | oxidoreductase | |
| E4F39_05585 | -1 | 15 | -1.938553 | SCPU domain-containing protein | |
| E4F39_05590 | -1 | 13 | -1.688565 | SCPU domain-containing protein | |
| E4F39_05595 | 0 | 16 | -2.454957 | SCPU domain-containing protein | |
| E4F39_05600 | 0 | 16 | -2.120662 | molecular chaperone | |
| E4F39_05605 | -1 | 18 | -2.487496 | fimbrial biogenesis outer membrane usher | |
| E4F39_05615 | 0 | 18 | -0.640069 | SCPU domain-containing protein | |
| E4F39_05620 | 3 | 14 | 0.767991 | hypothetical protein | |
| E4F39_05625 | 4 | 10 | 2.391760 | response regulator | |
| E4F39_05630 | 4 | 11 | 2.173620 | efflux transporter outer membrane subunit | |
| E4F39_05635 | 2 | 11 | 1.751632 | DHA2 family efflux MFS transporter permease | |
| E4F39_05640 | 1 | 13 | 2.175991 | thiol:disulfide interchange protein | |
| E4F39_05645 | 1 | 13 | 1.919622 | HlyD family secretion protein | |
| E4F39_05650 | 2 | 12 | 1.699719 | hypothetical protein | |
| E4F39_05655 | 0 | 13 | 2.686974 | enoyl-[acyl-carrier-protein] reductase FabV | |
| E4F39_05660 | 1 | 12 | 1.950489 | acid phosphatase | |
| E4F39_05665 | 2 | 12 | 2.476294 | cytochrome-c peroxidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05605 | TCRTETB | 40 | 1e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05650 | PF00577 | 455 | e-150 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05665 | HTHFIS | 63 | 1e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05685 | TCRTETB | 102 | 2e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05695 | RTXTOXIND | 100 | 6e-25 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 20 | E4F39_05765 | E4F39_05855 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_05765 | -1 | 15 | 3.327010 | iron-containing alcohol dehydrogenase | |
| E4F39_05770 | 0 | 13 | 3.443695 | hypothetical protein | |
| E4F39_05775 | -1 | 8 | 3.359301 | acyl-CoA thioesterase | |
| E4F39_05780 | -2 | 8 | 3.401970 | branched-chain amino acid ABC transporter | |
| E4F39_05785 | 0 | 10 | 3.934811 | ABC transporter ATP-binding protein | |
| E4F39_05790 | 1 | 12 | 3.183251 | 5-deoxy-glucuronate isomerase | |
| E4F39_05800 | 1 | 14 | 1.868874 | myo-inosose-2 dehydratase | |
| E4F39_05805 | 2 | 14 | 1.599248 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione | |
| E4F39_05815 | 1 | 14 | 2.829799 | 5-dehydro-2-deoxygluconokinase | |
| E4F39_05820 | 2 | 12 | 3.657643 | sugar ABC transporter ATP-binding protein | |
| E4F39_05825 | 0 | 19 | 4.693314 | ABC transporter permease | |
| E4F39_05830 | 1 | 17 | 4.822587 | sugar ABC transporter substrate-binding protein | |
| E4F39_05835 | 1 | 17 | 4.627896 | MurR/RpiR family transcriptional regulator | |
| E4F39_05840 | 1 | 15 | 4.259433 | inositol 2-dehydrogenase | |
| E4F39_05850 | 1 | 9 | 4.282234 | oxidoreductase | |
| E4F39_05855 | 1 | 15 | 3.075590 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05865 | PHPHTRNFRASE | 29 | 0.040 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05880 | PF05272 | 30 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 21 | E4F39_06410 | E4F39_06495 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_06410 | -2 | 14 | -3.624916 | Flp family type IVb pilin | |
| E4F39_06415 | -1 | 13 | -3.153113 | prepilin peptidase | |
| E4F39_06420 | 1 | 14 | -0.479794 | pilus assembly protein | |
| E4F39_06425 | 4 | 15 | 2.021518 | Flp pilus assembly protein CpaB | |
| E4F39_06430 | 4 | 15 | 1.543523 | type II and III secretion system protein family | |
| E4F39_06435 | 4 | 15 | 1.827112 | fimbrial protein | |
| E4F39_06440 | 3 | 13 | 1.829382 | CpaF family protein | |
| E4F39_06445 | 4 | 18 | 3.024688 | fimbriae-related outer membrane protein | |
| E4F39_06450 | 1 | 15 | 2.768584 | type II secretion system F family protein | |
| E4F39_06455 | -2 | 12 | 0.631559 | pilus assembly protein | |
| E4F39_06460 | -2 | 11 | 2.202799 | DUF3613 domain-containing protein | |
| E4F39_06465 | -1 | 11 | 1.816148 | hypothetical protein | |
| E4F39_06470 | 1 | 13 | 2.537913 | sigma-54-dependent Fis family transcriptional | |
| E4F39_06475 | 1 | 13 | 3.141185 | DUF2968 domain-containing protein | |
| E4F39_06480 | 1 | 13 | 3.130559 | RNA chaperone Hfq | |
| E4F39_06485 | 2 | 12 | 3.760649 | hypothetical protein | |
| E4F39_06490 | 1 | 13 | 3.376733 | hypothetical protein | |
| E4F39_06495 | 0 | 12 | 3.202052 | DUF1571 domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06465 | PREPILNPTASE | 54 | 3e-11 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06480 | BCTERIALGSPD | 138 | 2e-37 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06485 | HTHFIS | 38 | 5e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06505 | PYOCINKILLER | 32 | 0.004 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06520 | HTHFIS | 297 | 3e-98 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06525 | IGASERPTASE | 28 | 0.042 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06530 | PF00577 | 29 | 0.014 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 22 | E4F39_06860 | E4F39_07420 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_06860 | 2 | 15 | 1.867325 | PrkA family serine protein kinase | |
| E4F39_06865 | 3 | 14 | 2.602619 | YeaH/YhbH family protein | |
| E4F39_06870 | 1 | 13 | 3.317970 | SpoVR family protein | |
| E4F39_06875 | 1 | 13 | 3.750035 | hypothetical protein | |
| E4F39_06880 | -2 | 9 | 0.380356 | MFS transporter | |
| E4F39_06885 | -1 | 8 | -0.666999 | ABC transporter substrate-binding protein | |
| E4F39_06890 | -1 | 9 | -2.014513 | hypothetical protein | |
| E4F39_06895 | 0 | 9 | -3.280554 | ABC transporter ATP-binding protein | |
| E4F39_06900 | 0 | 10 | -4.710525 | ABC transporter permease subunit | |
| E4F39_06905 | 0 | 10 | -3.940163 | hypothetical protein | |
| E4F39_06910 | -1 | 10 | -2.823767 | Flp family type IVb pilin | |
| E4F39_06915 | -1 | 11 | -1.478402 | fimbrial protein | |
| E4F39_06925 | -1 | 11 | 0.698810 | Flp pilus assembly protein CpaB | |
| E4F39_06930 | 0 | 12 | 1.174901 | type II and III secretion system protein family | |
| E4F39_06935 | 2 | 11 | 2.399331 | hypothetical protein | |
| E4F39_06940 | 2 | 12 | 4.665561 | fimbrial protein | |
| E4F39_06945 | -2 | 13 | 4.124473 | CpaF family protein | |
| E4F39_06950 | -2 | 14 | 4.504368 | pilus assembly protein | |
| E4F39_06955 | -1 | 15 | 5.477275 | type II secretion system F family protein | |
| E4F39_06960 | 3 | 14 | 5.170851 | tetratricopeptide repeat protein | |
| E4F39_06965 | 2 | 15 | 4.904011 | pilus assembly protein | |
| E4F39_06970 | 4 | 17 | 4.180791 | pilus assembly protein TadE | |
| E4F39_06975 | 4 | 14 | 5.275815 | transporter substrate-binding domain-containing | |
| E4F39_06985 | 1 | 13 | 4.394982 | esterase | |
| E4F39_06990 | -2 | 10 | 3.680800 | hypothetical protein | |
| E4F39_06995 | -2 | 11 | 3.367570 | amino acid ABC transporter permease | |
| E4F39_07000 | -1 | 10 | 3.051801 | M23 family peptidase | |
| E4F39_07005 | 0 | 9 | 1.625520 | hypothetical protein | |
| E4F39_07010 | -1 | 16 | 2.075839 | TetR family transcriptional regulator | |
| E4F39_07020 | 0 | 18 | 3.818324 | MexX/AxyX family multidrug efflux RND | |
| E4F39_07030 | -2 | 12 | 4.003969 | multidrug efflux RND transporter permease | |
| E4F39_07035 | -2 | 11 | 2.636770 | efflux transporter outer membrane subunit | |
| E4F39_07040 | -1 | 12 | 3.294201 | hypothetical protein | |
| E4F39_07045 | -2 | 11 | 2.480964 | hypothetical protein | |
| E4F39_07050 | -1 | 11 | 2.462988 | type-1 fimbrial protein | |
| E4F39_07055 | 0 | 11 | 2.583943 | fimbrial biogenesis outer membrane usher | |
| E4F39_07060 | -1 | 11 | 1.719159 | molecular chaperone | |
| E4F39_07065 | 2 | 9 | 2.196097 | fimbrial protein | |
| E4F39_07070 | 3 | 11 | 0.842210 | thiopurine S-methyltransferase | |
| E4F39_07075 | 2 | 12 | 0.617546 | lasso peptide isopeptide bond-forming cyclase | |
| E4F39_07080 | 1 | 11 | 1.284110 | lasso peptide biosynthesis B2 protein | |
| E4F39_07085 | 1 | 12 | 1.266075 | capistruin family lasso peptide | |
| E4F39_07090 | 0 | 10 | 1.722819 | hypothetical protein | |
| E4F39_07095 | -2 | 13 | 1.502441 | helix-turn-helix domain-containing protein | |
| E4F39_07100 | -3 | 15 | 1.124787 | LacI family transcriptional regulator | |
| E4F39_07105 | 1 | 23 | 0.936259 | sugar ABC transporter ATP-binding protein | |
| E4F39_07110 | 2 | 13 | -0.078744 | ABC transporter permease | |
| E4F39_07115 | 1 | 8 | -0.239800 | 3-hydroxyanthranilate 3,4-dioxygenase | |
| E4F39_07120 | 2 | 10 | -0.747281 | erythritol/L-threitol dehydrogenase | |
| E4F39_07125 | 0 | 12 | 0.334640 | hypothetical protein | |
| E4F39_07130 | 0 | 11 | 0.919734 | SDR family oxidoreductase | |
| E4F39_07135 | 3 | 14 | 1.504622 | hypothetical protein | |
| E4F39_07140 | 3 | 16 | 2.413265 | RNA polymerase factor sigma-70 | |
| E4F39_07145 | 4 | 16 | 3.083033 | MbtH family NRPS accessory protein | |
| E4F39_07155 | 6 | 14 | 4.491032 | TauD/TfdA family dioxygenase | |
| E4F39_07165 | 4 | 13 | 5.109895 | Fe(3+)-hydroxamate ABC transporter permease | |
| E4F39_07170 | 3 | 15 | 5.580396 | siderophore-iron reductase FhuF | |
| E4F39_07175 | 1 | 14 | 4.637021 | iron-siderophore ABC transporter | |
| E4F39_07180 | 1 | 13 | 4.207822 | DUF1993 domain-containing protein | |
| E4F39_07185 | 1 | 13 | 6.228208 | hypothetical protein | |
| E4F39_07190 | 2 | 14 | 6.148931 | cyclic peptide export ABC transporter | |
| E4F39_07195 | 3 | 14 | 6.335034 | hypothetical protein | |
| E4F39_07200 | 4 | 13 | 5.968020 | amino acid adenylation domain-containing | |
| E4F39_07205 | 6 | 13 | 6.786799 | amino acid adenylation domain-containing | |
| E4F39_07210 | 1 | 12 | 5.706998 | TonB-dependent siderophore receptor | |
| E4F39_07215 | -2 | 11 | 3.641954 | N(5)-hydroxyornithine transformylase PvdF | |
| E4F39_07220 | 2 | 14 | 6.375832 | cobyrinate a,c-diamide synthase | |
| E4F39_07225 | 2 | 15 | 6.731125 | cob(I)yrinic acid a,c-diamide | |
| E4F39_07230 | 2 | 15 | 6.580913 | cobalamin biosynthesis protein CbiG | |
| E4F39_07235 | 2 | 16 | 5.788700 | HoxN/HupN/NixA family nickel/cobalt transporter | |
| E4F39_07240 | 2 | 16 | 5.872144 | cobalamin biosynthesis protein CobW | |
| E4F39_07245 | 2 | 16 | 5.977515 | cobaltochelatase subunit CobN | |
| E4F39_07250 | 1 | 14 | 4.757658 | hypothetical protein | |
| E4F39_07255 | 0 | 13 | 2.220282 | magnesium chelatase | |
| E4F39_07260 | -1 | 12 | 2.715099 | VWA domain-containing protein | |
| E4F39_07265 | 1 | 11 | 3.087573 | hypothetical protein | |
| E4F39_07270 | 2 | 11 | 3.360356 | integrase | |
| E4F39_07275 | 1 | 12 | 3.567101 | type IV secretion protein Rhs | |
| E4F39_07280 | 1 | 11 | 3.286375 | transposase | |
| E4F39_07285 | 1 | 10 | 4.171374 | Tn3 family transposase | |
| E4F39_07290 | 1 | 11 | 4.272048 | alpha/beta hydrolase | |
| E4F39_07295 | 0 | 10 | 5.332186 | hypothetical protein | |
| E4F39_07300 | -2 | 8 | 4.062812 | hypothetical protein | |
| E4F39_07305 | 3 | 30 | -3.056900 | hypothetical protein | |
| E4F39_07310 | 3 | 31 | -3.878817 | chitinase | |
| E4F39_07315 | 4 | 30 | -5.707781 | precorrin-2 C(20)-methyltransferase | |
| E4F39_07320 | 4 | 30 | -6.175099 | precorrin-8X methylmutase | |
| E4F39_07325 | 4 | 30 | -6.318265 | precorrin-3B synthase | |
| E4F39_07335 | 0 | 19 | -3.429930 | bifunctional cobalt-precorrin-7 | |
| E4F39_07340 | 1 | 15 | -2.309483 | cobalt-precorrin-5B (C(1))-methyltransferase | |
| E4F39_07345 | 2 | 15 | 4.133927 | cobalt-precorrin-6A reductase | |
| E4F39_07350 | 2 | 15 | 4.075938 | precorrin-4 C(11)-methyltransferase | |
| E4F39_07355 | 1 | 15 | 4.273772 | glycosyl hydrolase | |
| E4F39_07360 | 0 | 13 | 5.530807 | MFS transporter | |
| E4F39_07365 | 1 | 12 | 6.042766 | MarR family transcriptional regulator | |
| E4F39_07370 | 3 | 11 | 6.967071 | branched-chain amino acid ABC transporter | |
| E4F39_07375 | 1 | 16 | 6.913736 | MarR family transcriptional regulator | |
| E4F39_07380 | 2 | 16 | 7.804598 | glutathione S-transferase | |
| E4F39_07385 | 3 | 16 | 7.378015 | LysR family transcriptional regulator | |
| E4F39_07390 | 3 | 14 | 5.483693 | heme-binding protein | |
| E4F39_07395 | 1 | 12 | 5.195949 | SDR family oxidoreductase | |
| E4F39_07400 | 1 | 12 | 5.053803 | short-chain dehydrogenase | |
| E4F39_07405 | 1 | 11 | 3.695470 | carbamate kinase | |
| E4F39_07410 | 1 | 12 | 3.503911 | ornithine carbamoyltransferase | |
| E4F39_07415 | 0 | 12 | 3.585663 | arginine deiminase | |
| E4F39_07420 | 0 | 10 | 3.130946 | arginine-ornithine antiporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06925 | TCRTETB | 31 | 0.010 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06960 | PREPILNPTASE | 32 | 9e-04 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06970 | BCTERIALGSPD | 143 | 4e-39 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06980 | HTHFIS | 34 | 0.001 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06985 | PF05272 | 30 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07000 | SYCDCHAPRONE | 31 | 0.004 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07010 | PYOCINKILLER | 32 | 0.004 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07050 | HTHTETR | 117 | 5e-35 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07055 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07060 | ACRIFLAVINRP | 1079 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07065 | RTXTOXIND | 33 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07090 | PF00577 | 678 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07170 | DHBDHDRGNASE | 123 | 2e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07215 | 2FE2SRDCTASE | 57 | 6e-12 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07220 | FERRIBNDNGPP | 113 | 2e-31 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07310 | HTHFIS | 43 | 1e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07390 | OMADHESIN | 29 | 0.027 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07410 | LCRVANTIGEN | 30 | 0.008 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07460 | DHBDHDRGNASE | 87 | 2e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07470 | CARBMTKINASE | 403 | e-144 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07480 | ARGDEIMINASE | 515 | 0.0 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| 23 | E4F39_07490 | E4F39_08130 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_07490 | 3 | 15 | 4.865853 | chemotaxis protein CheW | |
| E4F39_07495 | 1 | 14 | 4.631762 | AraC family transcriptional regulator | |
| E4F39_07500 | 1 | 14 | 4.446142 | oxidoreductase | |
| E4F39_07505 | 0 | 14 | 3.580645 | porin | |
| E4F39_07510 | -2 | 13 | 2.965057 | hypothetical protein | |
| E4F39_07515 | -3 | 15 | 3.489542 | hypothetical protein | |
| E4F39_07520 | -3 | 15 | 3.202002 | alpha/beta fold hydrolase | |
| E4F39_07525 | -2 | 16 | 3.490311 | MbtH family NRPS accessory protein | |
| E4F39_07530 | -2 | 15 | 3.476755 | cupin-like domain-containing protein | |
| E4F39_07535 | -1 | 18 | 3.230402 | histidinol-phosphate aminotransferase family | |
| E4F39_07540 | -2 | 12 | 2.886564 | hypothetical protein | |
| E4F39_07545 | -2 | 11 | 1.490589 | formyl transferase | |
| E4F39_07550 | -3 | 10 | 1.186514 | argininosuccinate synthase | |
| E4F39_07555 | -2 | 9 | 1.498355 | argininosuccinate lyase | |
| E4F39_07560 | -1 | 9 | 2.061302 | kinase | |
| E4F39_07565 | -1 | 10 | 2.681846 | MFS transporter | |
| E4F39_07570 | -1 | 11 | 2.516407 | hypothetical protein | |
| E4F39_07575 | 0 | 14 | 3.140510 | pyridoxal-phosphate dependent enzyme | |
| E4F39_07580 | 2 | 19 | 2.293811 | ATP-grasp domain-containing protein | |
| E4F39_07585 | 1 | 17 | 2.512299 | aminotransferase class I/II-fold pyridoxal | |
| E4F39_07590 | 2 | 18 | 1.513230 | N-acetyltransferase | |
| E4F39_07595 | 2 | 17 | -0.510933 | amino acid adenylation domain-containing | |
| E4F39_07600 | 2 | 21 | -1.506175 | carbamoyltransferase | |
| E4F39_07605 | 0 | 16 | -3.110205 | hypothetical protein | |
| E4F39_07610 | -2 | 14 | -3.981405 | hypothetical protein | |
| E4F39_07620 | -1 | 7 | -4.352241 | DUF2282 domain-containing protein | |
| E4F39_07625 | -1 | 8 | -3.317630 | DUF692 domain-containing protein | |
| E4F39_07630 | 0 | 11 | -3.412228 | DUF2063 domain-containing protein | |
| E4F39_07635 | 0 | 13 | -1.967638 | DoxX family protein | |
| E4F39_07640 | 0 | 14 | -0.635744 | DUF1109 domain-containing protein | |
| E4F39_07645 | -1 | 14 | 1.426867 | sigma-70 family RNA polymerase sigma factor | |
| E4F39_07650 | -1 | 12 | 1.922220 | rhodanese-like domain-containing protein | |
| E4F39_07655 | -3 | 12 | 2.143104 | Zn-dependent hydrolase | |
| E4F39_07665 | -1 | 13 | 3.738280 | allantoinase | |
| E4F39_07670 | -2 | 10 | 3.920641 | LysR family transcriptional regulator | |
| E4F39_07675 | -2 | 10 | 3.604316 | DUF917 domain-containing protein | |
| E4F39_07680 | -2 | 9 | 3.467348 | urocanate hydratase | |
| E4F39_07685 | -2 | 9 | 3.393253 | MFS transporter | |
| E4F39_07690 | -1 | 24 | -0.510738 | sugar transporter | |
| E4F39_07700 | 2 | 36 | -6.130278 | hypothetical protein | |
| E4F39_07705 | 2 | 31 | -4.698868 | porin | |
| E4F39_07710 | 3 | 28 | -3.418441 | hypothetical protein | |
| E4F39_07715 | 3 | 25 | -2.085708 | DUF3443 family protein | |
| E4F39_07720 | 3 | 24 | -2.527517 | DUF2844 domain-containing protein | |
| E4F39_07725 | 2 | 23 | -1.846352 | IS3 family transposase | |
| E4F39_07730 | 4 | 26 | -2.740243 | response regulator transcription factor | |
| E4F39_07735 | 4 | 28 | -2.806133 | adenylyl-sulfate kinase | |
| E4F39_07740 | 2 | 24 | -1.823824 | hypothetical protein | |
| E4F39_07745 | 1 | 18 | -1.459074 | tetratricopeptide repeat protein | |
| E4F39_07750 | 2 | 17 | -1.214555 | HlyD family type I secretion periplasmic adaptor | |
| E4F39_07755 | 1 | 14 | -0.729820 | ATP-binding cassette domain-containing protein | |
| E4F39_07760 | 0 | 10 | -0.196200 | sulfotransferase | |
| E4F39_07765 | 0 | 9 | 0.132815 | hypothetical protein | |
| E4F39_07775 | -1 | 11 | -0.258754 | hemolysin | |
| E4F39_07780 | -2 | 11 | -0.508344 | TolC family protein | |
| E4F39_07790 | 1 | 14 | -1.401750 | outer membrane protein assembly factor BamE | |
| E4F39_07795 | 2 | 22 | -4.067788 | H-NS histone family protein | |
| E4F39_07800 | 6 | 33 | -7.180582 | peptide synthase | |
| E4F39_07805 | 7 | 37 | -6.673865 | outer membrane transporter TsaT | |
| E4F39_07815 | 7 | 49 | -9.591258 | hypothetical protein | |
| E4F39_07820 | 7 | 46 | -9.440598 | transcriptional regulator | |
| E4F39_07825 | 7 | 48 | -8.647918 | hypothetical protein | |
| E4F39_07830 | 5 | 43 | -6.750382 | MEKHLA domain-containing protein | |
| E4F39_07835 | 4 | 34 | -5.652297 | hypothetical protein | |
| E4F39_07840 | 5 | 31 | -5.212860 | hypothetical protein | |
| E4F39_07845 | 4 | 29 | -4.173532 | PHB depolymerase family esterase | |
| E4F39_07850 | 4 | 28 | -4.345257 | hypothetical protein | |
| E4F39_07855 | 4 | 28 | -4.257052 | hypothetical protein | |
| E4F39_07860 | 9 | 20 | -3.750465 | DUF4102 domain-containing protein | |
| E4F39_07870 | 11 | 20 | -4.007529 | hypothetical protein | |
| E4F39_07875 | 11 | 20 | -4.211459 | hypothetical protein | |
| E4F39_07880 | 12 | 21 | -4.202671 | MFS transporter | |
| E4F39_07890 | 6 | 37 | -6.317512 | NAD(P)/FAD-dependent oxidoreductase | |
| E4F39_07895 | 6 | 47 | -8.070750 | cation:proton antiporter | |
| E4F39_07900 | 4 | 47 | -7.717089 | Rieske (2Fe-2S) protein | |
| E4F39_07905 | 3 | 45 | -7.331377 | oxygenase | |
| E4F39_07910 | 3 | 47 | -7.180406 | hypothetical protein | |
| E4F39_07915 | 6 | 50 | -11.697570 | dihydroxyacetone kinase subunit DhaK | |
| E4F39_07920 | 7 | 57 | -13.516397 | hypothetical protein | |
| E4F39_07925 | 6 | 49 | -11.733654 | ABC transporter permease | |
| E4F39_07930 | 7 | 52 | -11.935646 | ABC transporter ATP-binding protein | |
| E4F39_07935 | 7 | 54 | -11.777507 | FAD:protein FMN transferase | |
| E4F39_07940 | 5 | 43 | -8.019613 | nitrous-oxide reductase | |
| E4F39_07945 | 4 | 36 | -4.999565 | nitrous oxide reductase family maturation | |
| E4F39_07950 | 4 | 34 | -3.536728 | ABC transporter ATP-binding protein | |
| E4F39_07955 | 5 | 35 | -2.869312 | ABC transporter permease | |
| E4F39_07960 | 5 | 41 | -2.367745 | nitrous oxide reductase accessory protein NosL | |
| E4F39_07965 | 5 | 40 | -2.497244 | hypothetical protein | |
| E4F39_07970 | 8 | 50 | -4.397933 | hypothetical protein | |
| E4F39_07975 | 7 | 43 | -4.453866 | cytochrome c5 family protein | |
| E4F39_07980 | 6 | 47 | -6.029675 | 4Fe-4S binding protein | |
| E4F39_07985 | 1 | 31 | -4.823141 | mechanosensitive ion channel family protein | |
| E4F39_07995 | -1 | 14 | -1.338199 | hypothetical protein | |
| E4F39_08000 | -1 | 9 | -0.100878 | hypothetical protein | |
| E4F39_08005 | 1 | 8 | 2.138442 | lipoprotein | |
| E4F39_08010 | 1 | 9 | 3.628902 | hypothetical protein | |
| E4F39_08015 | 2 | 9 | 4.500324 | hypothetical protein | |
| E4F39_08020 | 1 | 21 | 4.334624 | hypothetical protein | |
| E4F39_08025 | 0 | 22 | 3.930580 | magnesium/cobalt transporter CorA | |
| E4F39_08035 | 0 | 17 | 4.652323 | cytochrome bd-I oxidase subunit CydX | |
| E4F39_08040 | 0 | 28 | 3.347283 | ATP-binding protein | |
| E4F39_08045 | -4 | 17 | 1.612629 | NAD-dependent epimerase/dehydratase family | |
| E4F39_08050 | -3 | 12 | 0.992077 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
| E4F39_08055 | -3 | 13 | 1.119353 | hypothetical protein | |
| E4F39_08060 | -3 | 14 | 0.557964 | hypothetical protein | |
| E4F39_08065 | -2 | 15 | -0.109735 | Lrp/AsnC family transcriptional regulator | |
| E4F39_08075 | -1 | 19 | 2.186331 | hypothetical protein | |
| E4F39_08080 | -1 | 19 | 3.202770 | LtxA | |
| E4F39_08085 | -2 | 18 | 1.505922 | SDR family oxidoreductase | |
| E4F39_08090 | -2 | 19 | 1.277108 | hypothetical protein | |
| E4F39_08095 | 1 | 14 | 1.228504 | depolymerase | |
| E4F39_08100 | 0 | 12 | 1.254384 | hypothetical protein | |
| E4F39_08105 | 0 | 11 | 1.013582 | multidrug transporter | |
| E4F39_08110 | 2 | 12 | 0.709654 | DUF3022 domain-containing protein | |
| E4F39_08115 | 2 | 15 | 1.850019 | YhfC family intramembrane metalloprotease | |
| E4F39_08120 | 2 | 13 | 1.856183 | LacI family DNA-binding transcriptional | |
| E4F39_08125 | 3 | 26 | 2.568773 | hypothetical protein | |
| E4F39_08130 | 2 | 28 | 3.115593 | D-glycerate dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07595 | ECOLNEIPORIN | 93 | 3e-23 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07665 | ARGDEIMINASE | 29 | 0.039 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07745 | PF08280 | 28 | 0.020 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07805 | ECOLNEIPORIN | 92 | 4e-23 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07840 | HTHFIS | 75 | 8e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07860 | SYCDCHAPRONE | 33 | 0.005 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07865 | RTXTOXIND | 274 | 5e-89 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07885 | INTIMIN | 47 | 1e-06 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07895 | OMPADOMAIN | 113 | 4e-31 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08020 | PF07675 | 31 | 0.008 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08050 | ABC2TRNSPORT | 53 | 1e-10 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08105 | PF05272 | 30 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08120 | RTXTOXIND | 37 | 3e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08180 | NUCEPIMERASE | 33 | 0.001 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08195 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08255 | HTHTETR | 35 | 3e-04 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 24 | E4F39_08205 | E4F39_08320 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_08205 | 2 | 17 | 1.908158 | hypothetical protein | |
| E4F39_08210 | 1 | 15 | 1.293892 | hypothetical protein | |
| E4F39_08215 | 2 | 16 | 1.616290 | hypothetical protein | |
| E4F39_08225 | 0 | 10 | 1.504717 | transcriptional regulator | |
| E4F39_08230 | 0 | 10 | 1.432674 | DUF2975 domain-containing protein | |
| E4F39_08240 | 0 | 8 | 2.665102 | PAS domain-containing protein | |
| E4F39_08250 | 1 | 10 | 2.331780 | MBL fold metallo-hydrolase | |
| E4F39_08255 | 0 | 11 | 3.378259 | TIGR01244 family phosphatase | |
| E4F39_08260 | 0 | 11 | 3.816888 | sulfite exporter TauE/SafE family protein | |
| E4F39_08265 | 1 | 11 | 3.816291 | hypothetical protein | |
| E4F39_08270 | 0 | 13 | 3.631158 | ABC transporter permease subunit | |
| E4F39_08275 | 0 | 13 | 3.927743 | ABC transporter permease subunit | |
| E4F39_08280 | -2 | 13 | 3.381768 | polyamine ABC transporter ATP-binding protein | |
| E4F39_08285 | -1 | 12 | 2.930279 | polyamine ABC transporter substrate-binding | |
| E4F39_08290 | 0 | 11 | 1.945106 | Mn(2+) uptake NRAMP transporter MntH | |
| E4F39_08295 | 0 | 13 | 2.505398 | DUF1289 domain-containing protein | |
| E4F39_08300 | -1 | 11 | 2.543147 | OmpW family protein | |
| E4F39_08305 | -1 | 10 | 2.337919 | nitronate monooxygenase | |
| E4F39_08310 | -2 | 10 | 2.724402 | aldehyde dehydrogenase family protein | |
| E4F39_08315 | -3 | 8 | 2.846929 | hypothetical protein | |
| E4F39_08320 | 0 | 11 | 4.288277 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08340 | PF03544 | 28 | 0.027 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08355 | HTHFIS | 333 | e-112 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 25 | E4F39_08950 | E4F39_08975 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_08950 | -1 | 13 | -3.922451 | LysR family transcriptional regulator | |
| E4F39_08955 | -1 | 13 | -4.188989 | glyoxylate carboligase | |
| E4F39_08960 | 1 | 15 | -4.661302 | hydroxypyruvate isomerase | |
| E4F39_08965 | 2 | 17 | -4.611810 | 2-hydroxy-3-oxopropionate reductase | |
| E4F39_08970 | 3 | 15 | -1.197448 | hypothetical protein | |
| E4F39_08975 | 2 | 12 | 0.015182 | peptidoglycan-binding protein LysM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09040 | SALSPVBPROT | 28 | 0.023 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| 26 | E4F39_09240 | E4F39_09455 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_09240 | -1 | 14 | 3.465641 | hypothetical protein | |
| E4F39_09245 | -1 | 14 | 3.026593 | ATPase | |
| E4F39_09250 | -1 | 13 | 3.677402 | hypothetical protein | |
| E4F39_09255 | -2 | 13 | 3.685146 | ribosome-associated translation inhibitor RaiA | |
| E4F39_09265 | -3 | 11 | 0.076134 | LuxR family transcriptional regulator | |
| E4F39_09275 | -3 | 11 | -0.241673 | *hypothetical protein | |
| E4F39_09280 | -3 | 16 | -0.972756 | endopeptidase La | |
| E4F39_09295 | 7 | 34 | -0.318104 | ATP-dependent Clp protease ATP-binding subunit | |
| E4F39_09300 | 6 | 38 | 0.022570 | ATP-dependent Clp protease proteolytic subunit | |
| E4F39_09305 | 2 | 31 | -0.334456 | trigger factor | |
| E4F39_09315 | 1 | 31 | -2.194479 | glycerate kinase | |
| E4F39_09320 | 1 | 12 | -3.487659 | MarR family transcriptional regulator | |
| E4F39_09325 | 3 | 11 | -4.620898 | hypothetical protein | |
| E4F39_09330 | 3 | 10 | -4.967244 | helix-turn-helix transcriptional regulator | |
| E4F39_09335 | 4 | 10 | -4.748096 | LuxR family transcriptional regulator | |
| E4F39_09345 | 4 | 10 | -4.556385 | porin | |
| E4F39_09350 | 3 | 9 | -2.425341 | MFS transporter | |
| E4F39_09355 | 1 | 9 | -1.450250 | class II histone deacetylase | |
| E4F39_09360 | 1 | 9 | 0.847524 | phospholipase D family protein | |
| E4F39_09365 | 2 | 15 | 2.645013 | exported avidin family protein | |
| E4F39_09370 | 1 | 17 | 4.231745 | hypothetical protein | |
| E4F39_09375 | 2 | 18 | 4.006265 | hypothetical protein | |
| E4F39_09380 | -1 | 18 | 2.357973 | hypothetical protein | |
| E4F39_09385 | -1 | 15 | 3.326692 | DUF4123 domain-containing protein | |
| E4F39_09390 | -1 | 13 | 2.717301 | hypothetical protein | |
| E4F39_09395 | -1 | 9 | 1.598305 | hypothetical protein | |
| E4F39_09400 | -2 | 12 | 1.397159 | hypothetical protein | |
| E4F39_09405 | -2 | 13 | -0.227026 | *presqualene diphosphate synthase HpnD | |
| E4F39_09410 | -3 | 17 | -1.198104 | DUF1501 domain-containing protein | |
| E4F39_09415 | -2 | 27 | -4.326611 | DUF1800 domain-containing protein | |
| E4F39_09420 | 3 | 43 | -8.395183 | hypothetical protein | |
| E4F39_09425 | 5 | 53 | -10.675155 | hypothetical protein | |
| E4F39_09430 | 4 | 38 | -8.566698 | two-component system response regulator OmpR | |
| E4F39_09435 | 1 | 30 | -6.110004 | HAMP domain-containing protein | |
| E4F39_09440 | 5 | 37 | -6.903412 | peroxiredoxin | |
| E4F39_09445 | 4 | 36 | -6.925722 | carboxymuconolactone decarboxylase family | |
| E4F39_09450 | 2 | 32 | -5.785061 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate | |
| E4F39_09455 | 0 | 24 | -3.426900 | 2-C-methyl-D-erythritol 4-phosphate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09350 | GPOSANCHOR | 40 | 3e-05 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09355 | HTHFIS | 31 | 0.009 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09405 | ECOLNEIPORIN | 67 | 1e-14 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09410 | TCRTETA | 31 | 0.009 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09510 | HTHFIS | 100 | 3e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09515 | PF06580 | 38 | 5e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 27 | E4F39_09715 | E4F39_09855 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_09715 | 4 | 27 | -0.614097 | hypothetical protein | |
| E4F39_09720 | 5 | 19 | 0.919970 | DUF899 domain-containing protein | |
| E4F39_09725 | 5 | 22 | 0.954516 | helix-turn-helix domain-containing protein | |
| E4F39_09730 | 5 | 23 | 0.346658 | glutamine cyclotransferase | |
| E4F39_09735 | 6 | 25 | -1.177332 | DMT family transporter | |
| E4F39_09740 | 7 | 38 | -2.528254 | RnfH family protein | |
| E4F39_09745 | 7 | 41 | -5.516010 | type II toxin-antitoxin system RatA family | |
| E4F39_09750 | 8 | 49 | -7.622126 | SsrA-binding protein SmpB | |
| E4F39_09755 | 10 | 51 | -8.248405 | SPFH/Band 7/PHB domain protein | |
| E4F39_09760 | 11 | 51 | -8.475325 | NfeD family protein | |
| E4F39_09765 | 11 | 49 | -8.405455 | phosphoenolpyruvate synthase | |
| E4F39_09770 | 10 | 46 | -9.426587 | hypothetical protein | |
| E4F39_09775 | 9 | 46 | -9.254589 | glutathione gamma-glutamylcysteinyltransferase | |
| E4F39_09780 | 9 | 49 | -9.366435 | hypothetical protein | |
| E4F39_09785 | 4 | 25 | -7.097820 | peptidase S53 | |
| E4F39_09790 | 2 | 21 | -4.690688 | kinase/pyrophosphorylase | |
| E4F39_09795 | 0 | 11 | -3.055733 | hypothetical protein | |
| E4F39_09800 | -1 | 8 | -0.601364 | RNA methyltransferase | |
| E4F39_09805 | -1 | 7 | -0.044567 | ribonuclease HII | |
| E4F39_09810 | -3 | 9 | 2.174722 | lipid-A-disaccharide synthase | |
| E4F39_09815 | 0 | 11 | 3.555504 | acyl-ACP--UDP-N-acetylglucosamine | |
| E4F39_09820 | -2 | 12 | 2.758643 | 3-hydroxyacyl-ACP dehydratase FabZ | |
| E4F39_09825 | 0 | 13 | 3.947079 | UDP-3-O-(3-hydroxymyristoyl)glucosamine | |
| E4F39_09830 | -1 | 13 | 2.768247 | OmpH family outer membrane protein | |
| E4F39_09835 | -1 | 12 | 1.839762 | outer membrane protein assembly factor BamA | |
| E4F39_09840 | -1 | 11 | -1.636318 | RIP metalloprotease RseP | |
| E4F39_09845 | -1 | 12 | -1.887220 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | |
| E4F39_09850 | 0 | 15 | -3.164968 | phosphatidate cytidylyltransferase membrane | |
| E4F39_09855 | -2 | 12 | -3.465938 | di-trans,poly-cis-decaprenylcistransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09865 | RTXTOXINA | 30 | 0.021 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09875 | PHPHTRNFRASE | 265 | 4e-81 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09890 | INFPOTNTIATR | 25 | 0.019 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09895 | SUBTILISIN | 41 | 7e-06 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| 28 | E4F39_10405 | E4F39_10435 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_10405 | 1 | 11 | 3.021616 | *aspartate kinase | |
| E4F39_10410 | 1 | 10 | 3.342816 | hypothetical protein | |
| E4F39_10415 | 1 | 9 | 3.678613 | tRNA lysidine(34) synthetase TilS | |
| E4F39_10420 | 1 | 8 | 3.922637 | acetyl-CoA carboxylase carboxyltransferase | |
| E4F39_10425 | 1 | 12 | 3.672369 | DNA-3-methyladenine glycosylase 2 family | |
| E4F39_10430 | 1 | 15 | 3.256912 | cysteine--tRNA ligase | |
| E4F39_10435 | -1 | 19 | 3.199468 | tetratricopeptide repeat protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10505 | CARBMTKINASE | 36 | 2e-04 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10535 | SYCDCHAPRONE | 28 | 0.017 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 29 | E4F39_10570 | E4F39_10670 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_10570 | 3 | 26 | -6.107009 | PAAR domain-containing protein | |
| E4F39_10575 | 0 | 26 | -6.530920 | DUF4123 domain-containing protein | |
| E4F39_10585 | 6 | 40 | -7.985588 | hypothetical protein | |
| E4F39_10590 | 7 | 40 | -7.980191 | hypothetical protein | |
| E4F39_10595 | 10 | 54 | -11.940704 | DNA adenine methylase | |
| E4F39_10600 | 10 | 54 | -12.018551 | lysozyme | |
| E4F39_10605 | 10 | 53 | -12.340197 | glycosyl hydrolase | |
| E4F39_10610 | 9 | 57 | -12.776341 | hypothetical protein | |
| E4F39_10615 | 11 | 75 | -17.676948 | late control protein | |
| E4F39_10620 | 11 | 76 | -18.622773 | phage tail protein | |
| E4F39_10625 | 9 | 65 | -16.162109 | phage tail protein | |
| E4F39_10635 | 9 | 52 | -11.621497 | phage tail tape measure protein | |
| E4F39_10640 | 9 | 48 | -10.708869 | phage tail assembly protein | |
| E4F39_10645 | 3 | 29 | -5.259962 | phage major tail tube protein | |
| E4F39_10650 | 2 | 20 | -4.281381 | phage tail sheath family protein | |
| E4F39_10655 | 1 | 25 | -4.027955 | tail assembly chaperone | |
| E4F39_10660 | 2 | 28 | -4.743279 | hypothetical protein | |
| E4F39_10670 | 0 | 21 | -3.059944 | phage tail protein I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10695 | PRPHPHLPASEC | 29 | 0.034 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| 30 | E4F39_10795 | E4F39_10905 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_10795 | 2 | 19 | -3.513248 | hypothetical protein | |
| E4F39_10800 | 2 | 24 | -5.749833 | hypothetical protein | |
| E4F39_10805 | 3 | 30 | -6.461991 | hypothetical protein | |
| E4F39_10810 | 1 | 30 | -6.284503 | hypothetical protein | |
| E4F39_10815 | 0 | 28 | -5.840110 | hypothetical protein | |
| E4F39_10820 | 1 | 29 | -6.044513 | hypothetical protein | |
| E4F39_10825 | 0 | 28 | -5.524605 | XRE family transcriptional regulator | |
| E4F39_10830 | 0 | 26 | -5.944277 | hypothetical protein | |
| E4F39_10835 | 0 | 22 | -5.305312 | hypothetical protein | |
| E4F39_10840 | -1 | 36 | -7.140959 | hypothetical protein | |
| E4F39_10845 | 0 | 40 | -7.920713 | hypothetical protein | |
| E4F39_10850 | 1 | 44 | -9.112203 | ACP synthase | |
| E4F39_10855 | 2 | 43 | -9.612190 | pyridoxal phosphate biosynthetic protein PdxJ | |
| E4F39_10860 | 2 | 42 | -7.634044 | hypothetical protein | |
| E4F39_10865 | 1 | 41 | -7.626071 | hypothetical protein | |
| E4F39_10870 | 1 | 40 | -6.909876 | AlpA family phage regulatory protein | |
| E4F39_10875 | 0 | 39 | -6.787805 | DUF4102 domain-containing protein | |
| E4F39_10880 | 0 | 29 | -5.042929 | DNA mismatch repair protein MutS | |
| E4F39_10885 | 0 | 25 | -4.118059 | hypothetical protein | |
| E4F39_10890 | 0 | 25 | -4.423737 | peptidylprolyl isomerase | |
| E4F39_10895 | 0 | 28 | -4.411102 | cupin domain-containing protein | |
| E4F39_10900 | 2 | 33 | -5.695606 | hypothetical protein | |
| E4F39_10905 | 0 | 21 | -3.145448 | lipoprotein |
| 31 | E4F39_11410 | E4F39_11530 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_11410 | 0 | 12 | -4.037458 | hypothetical protein | |
| E4F39_11420 | -1 | 10 | -3.065150 | N-formylglutamate deformylase | |
| E4F39_11425 | -4 | 10 | -1.707885 | hypothetical protein | |
| E4F39_11430 | -4 | 9 | -0.699041 | formimidoylglutamate deiminase | |
| E4F39_11440 | 0 | 15 | -0.029621 | imidazolonepropionase | |
| E4F39_11445 | 8 | 23 | 3.488413 | HutD family protein | |
| E4F39_11450 | 6 | 20 | 1.550287 | urocanate hydratase | |
| E4F39_11455 | 5 | 19 | 1.710792 | histidine utilization repressor | |
| E4F39_11460 | 3 | 14 | 2.120667 | histidine ammonia-lyase | |
| E4F39_11465 | 1 | 13 | 2.561007 | hypothetical protein | |
| E4F39_11470 | 1 | 11 | 3.434686 | 4'-phosphopantetheinyl transferase superfamily | |
| E4F39_11475 | 0 | 12 | 2.350870 | alpha/beta fold hydrolase | |
| E4F39_11480 | 0 | 11 | 2.117152 | LuxR family transcriptional regulator | |
| E4F39_11485 | 0 | 13 | 2.030301 | hypothetical protein | |
| E4F39_11490 | 0 | 12 | 2.200097 | hypothetical protein | |
| E4F39_11495 | 0 | 11 | 2.638511 | adenylyl-sulfate kinase | |
| E4F39_11500 | -1 | 10 | 2.475922 | deoxyribodipyrimidine photo-lyase | |
| E4F39_11505 | -1 | 7 | 3.741081 | alkane 1-monooxygenase | |
| E4F39_11510 | 0 | 9 | 3.767856 | hypothetical protein | |
| E4F39_11515 | 4 | 15 | 3.510147 | nitric-oxide reductase large subunit | |
| E4F39_11520 | 4 | 15 | 3.009080 | metal-sulfur cluster assembly factor | |
| E4F39_11525 | 3 | 17 | 1.564869 | hypothetical protein | |
| E4F39_11530 | 3 | 14 | 2.605299 | NnrS family protein |
| 32 | E4F39_11690 | E4F39_11735 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_11690 | 1 | 11 | 3.026664 | ubiquinol oxidase subunit II | |
| E4F39_11695 | 2 | 11 | 2.904326 | cytochrome o ubiquinol oxidase subunit I | |
| E4F39_11700 | 1 | 14 | 1.384358 | cytochrome o ubiquinol oxidase subunit III | |
| E4F39_11705 | 1 | 14 | -0.973189 | cytochrome o ubiquinol oxidase subunit IV | |
| E4F39_11710 | -1 | 17 | -2.065249 | fatty acid desaturase | |
| E4F39_11715 | -1 | 15 | -3.602805 | ABC transporter substrate-binding protein | |
| E4F39_11720 | 0 | 9 | -4.474636 | glutathione S-transferase | |
| E4F39_11725 | -1 | 9 | -3.970257 | succinylglutamate desuccinylase | |
| E4F39_11730 | 1 | 9 | -4.049832 | N-succinylarginine dihydrolase | |
| E4F39_11735 | 1 | 9 | -3.013155 | succinylglutamate-semialdehyde dehydrogenase |
| 33 | E4F39_12420 | E4F39_12445 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_12420 | 3 | 24 | -2.642640 | acyl-CoA dehydrogenase | |
| E4F39_12425 | 6 | 28 | -3.557813 | electron transfer flavoprotein subunit alpha | |
| E4F39_12430 | 4 | 26 | -4.317749 | electron transfer flavoprotein subunit beta/FixA | |
| E4F39_12435 | 3 | 21 | -3.543062 | MetQ/NlpA family ABC transporter | |
| E4F39_12440 | 3 | 20 | -3.606027 | ABC transporter permease | |
| E4F39_12445 | 3 | 18 | -3.299595 | methionine ABC transporter ATP-binding protein |
| 34 | E4F39_12820 | E4F39_12920 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_12820 | 4 | 39 | -1.604187 | bifunctional (p)ppGpp | |
| E4F39_12825 | 4 | 38 | -1.662564 | DNA-directed RNA polymerase subunit omega | |
| E4F39_12830 | 2 | 32 | -1.116116 | guanylate kinase | |
| E4F39_12835 | 0 | 20 | 0.602121 | YicC family protein | |
| E4F39_12840 | -1 | 10 | 0.433488 | ribonuclease PH | |
| E4F39_12845 | -1 | 9 | 0.994019 | RdgB/HAM1 family non-canonical purine NTP | |
| E4F39_12850 | 0 | 10 | 1.557869 | oxygen-independent coproporphyrinogen III | |
| E4F39_12855 | 0 | 9 | 1.583587 | *hypothetical protein | |
| E4F39_12860 | 0 | 8 | 1.533329 | hypothetical protein | |
| E4F39_12865 | 3 | 11 | 0.409453 | TonB family protein | |
| E4F39_12870 | 3 | 18 | 0.097270 | hypothetical protein | |
| E4F39_12875 | 6 | 15 | -1.634482 | MFS transporter | |
| E4F39_12885 | 5 | 14 | -3.254076 | hypothetical protein | |
| E4F39_12895 | 1 | 12 | -4.248918 | lipopolysaccharide heptosyltransferase I | |
| E4F39_12900 | 0 | 12 | -4.275595 | chloride channel protein | |
| E4F39_12905 | -2 | 11 | -3.900953 | hypothetical protein | |
| E4F39_12920 | -1 | 12 | -3.148319 | cell division topological specificity factor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_12985 | PF03544 | 29 | 0.007 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_12995 | TCRTETA | 34 | 7e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 35 | E4F39_13470 | E4F39_13530 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_13470 | 1 | 16 | -4.012243 | dTDP-glucose 4,6-dehydratase | |
| E4F39_13475 | 2 | 27 | -5.469108 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | |
| E4F39_13480 | 1 | 34 | -6.608879 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | |
| E4F39_13485 | 2 | 40 | -7.786691 | dihydroorotase | |
| E4F39_13495 | 2 | 40 | -9.123691 | aspartate carbamoyltransferase | |
| E4F39_13500 | 2 | 40 | -9.036228 | bifunctional pyr operon transcriptional | |
| E4F39_13505 | 3 | 39 | -9.802099 | Holliday junction resolvase RuvX | |
| E4F39_13510 | 4 | 39 | -9.370507 | YqgE/AlgH family protein | |
| E4F39_13515 | 4 | 41 | -9.713693 | rubredoxin | |
| E4F39_13520 | 4 | 36 | -9.335067 | hydroxymethylpyrimidine/phosphomethylpyrimidine | |
| E4F39_13525 | 2 | 28 | -7.610520 | chaperonin GroEL | |
| E4F39_13530 | 1 | 22 | -5.475457 | co-chaperone GroES |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13550 | NUCEPIMERASE | 174 | 4e-54 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 36 | E4F39_13595 | E4F39_13655 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_13595 | 5 | 27 | -1.802034 | transcriptional regulator | |
| E4F39_13600 | 6 | 27 | -2.328850 | MBL fold metallo-hydrolase | |
| E4F39_13605 | 8 | 30 | -3.088479 | XRE family transcriptional regulator | |
| E4F39_13610 | 6 | 26 | -2.613957 | GNAT family N-acetyltransferase | |
| E4F39_13615 | 6 | 24 | -0.977499 | LysE family translocator | |
| E4F39_13620 | 5 | 24 | -0.367886 | hypothetical protein | |
| E4F39_13625 | 2 | 23 | -1.337695 | glycerophosphodiester phosphodiesterase | |
| E4F39_13630 | 1 | 17 | -0.744142 | DHA2 family efflux MFS transporter permease | |
| E4F39_13635 | 0 | 13 | -0.871076 | hypothetical protein | |
| E4F39_13640 | 1 | 12 | -1.354192 | sulfite exporter TauE/SafE family protein | |
| E4F39_13645 | 2 | 13 | -2.302728 | peptidase S1 | |
| E4F39_13650 | 4 | 12 | -2.916312 | hypothetical protein | |
| E4F39_13655 | 2 | 11 | -3.148272 | D-(-)-3-hydroxybutyrate oligomer hydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13690 | AUTOINDCRSYN | 28 | 0.018 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13710 | TCRTETB | 132 | 4e-36 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 37 | E4F39_14185 | E4F39_14305 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_14185 | 5 | 37 | -7.137425 | ABC transporter permease | |
| E4F39_14195 | 5 | 35 | -9.267647 | capsule biosynthesis protein | |
| E4F39_14200 | 4 | 36 | -9.485908 | polysaccharide export protein | |
| E4F39_14205 | 4 | 38 | -10.717990 | glycosyltransferase family 1 protein | |
| E4F39_14210 | 4 | 38 | -11.151967 | capsule polysaccharide export protein | |
| E4F39_14215 | 4 | 40 | -11.410131 | mannose-1-phosphate | |
| E4F39_14220 | 4 | 42 | -11.752970 | class II glutamine amidotransferase | |
| E4F39_14225 | 4 | 47 | -12.520328 | mechanosensitive ion channel family protein | |
| E4F39_14230 | 5 | 49 | -13.219234 | hypothetical protein | |
| E4F39_14235 | 6 | 49 | -13.134241 | DNA mismatch repair endonuclease MutL | |
| E4F39_14240 | 6 | 51 | -13.245861 | tRNA (adenosine(37)-N6)-dimethylallyltransferase | |
| E4F39_14245 | 6 | 50 | -12.606985 | SgcJ/EcaC family oxidoreductase | |
| E4F39_14255 | 6 | 43 | -9.012291 | phosphoribosylformylglycinamidine cyclo-ligase | |
| E4F39_14260 | 4 | 37 | -7.706317 | hypothetical protein | |
| E4F39_14265 | 3 | 33 | -6.450778 | DnaA regulatory inactivator Hda | |
| E4F39_14270 | 1 | 26 | -4.982511 | HAD-IB family hydrolase | |
| E4F39_14275 | 0 | 22 | -4.553648 | polynucleotide adenylyltransferase PcnB | |
| E4F39_14280 | -2 | 14 | -1.941398 | 2-amino-4-hydroxy-6- | |
| E4F39_14285 | -2 | 10 | -0.582115 | deoxynucleoside kinase | |
| E4F39_14290 | -1 | 8 | 0.827561 | 3-methyl-2-oxobutanoate | |
| E4F39_14295 | -1 | 8 | 1.261759 | chloride transporter | |
| E4F39_14300 | -1 | 9 | 1.674583 | molecular chaperone DnaJ | |
| E4F39_14305 | -1 | 9 | 3.003262 | molecular chaperone DnaK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14260 | ABC2TRNSPORT | 38 | 2e-05 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14365 | OMADHESIN | 30 | 0.031 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14375 | SHAPEPROTEIN | 135 | 3e-37 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 38 | E4F39_14495 | E4F39_14540 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_14495 | 2 | 15 | 1.703882 | 4-hydroxybenzoate octaprenyltransferase | |
| E4F39_14500 | 2 | 15 | 1.465228 | transcriptional regulator | |
| E4F39_14505 | 2 | 15 | 2.538538 | transcriptional regulator | |
| E4F39_14510 | 2 | 17 | 2.744400 | non-specific DNA-binding protein DpsA | |
| E4F39_14515 | 1 | 16 | 2.708030 | hypothetical protein | |
| E4F39_14520 | 1 | 16 | 1.694079 | hypothetical protein | |
| E4F39_14525 | 0 | 13 | 2.012709 | catalase/peroxidase HPI | |
| E4F39_14535 | 3 | 15 | 4.003240 | hydrogen peroxide-inducible genes activator | |
| E4F39_14540 | 2 | 12 | 2.102575 | ATP-dependent DNA helicase RecG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14580 | HELNAPAPROT | 157 | 3e-52 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14605 | IGASERPTASE | 36 | 8e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 39 | E4F39_14690 | E4F39_14720 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_14690 | 0 | 13 | 3.910891 | tRNA 2-thiouridine(34) synthase MnmA | |
| E4F39_14695 | 1 | 14 | 3.589471 | FMN-binding glutamate synthase family protein | |
| E4F39_14700 | 1 | 14 | 2.638511 | glutathione S-transferase | |
| E4F39_14705 | 3 | 18 | 3.204965 | hypothetical protein | |
| E4F39_14710 | 6 | 25 | 2.807133 | M24 family metallopeptidase | |
| E4F39_14715 | 4 | 22 | 2.012317 | UbiH/UbiF/VisC/COQ6 family ubiquinone | |
| E4F39_14720 | 2 | 24 | 1.963656 | tRNA dihydrouridine synthase DusB |
| 40 | E4F39_14875 | E4F39_14985 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_14875 | 0 | 12 | -3.506827 | hypothetical protein | |
| E4F39_14880 | 0 | 14 | -4.723789 | hypothetical protein | |
| E4F39_14885 | 0 | 14 | -3.905410 | Hsp20/alpha crystallin family protein | |
| E4F39_14890 | -1 | 11 | -1.815189 | Hsp20/alpha crystallin family protein | |
| E4F39_14895 | 1 | 14 | -1.235214 | hypothetical protein | |
| E4F39_14900 | -1 | 12 | -0.670501 | co-chaperone GroES | |
| E4F39_14905 | -2 | 13 | 0.664321 | hypothetical protein | |
| E4F39_14915 | -2 | 12 | 1.019428 | hypothetical protein | |
| E4F39_14920 | -3 | 11 | 0.468812 | amino acid ABC transporter ATP-binding protein | |
| E4F39_14930 | -1 | 16 | -0.983922 | glutamate/aspartate ABC transporter permease | |
| E4F39_14935 | 3 | 30 | -0.675722 | amino acid ABC transporter permease | |
| E4F39_14940 | 2 | 29 | -1.510589 | glutamate/aspartate ABC transporter | |
| E4F39_14945 | 3 | 30 | -1.090541 | Glu/Leu/Phe/Val dehydrogenase | |
| E4F39_14950 | 1 | 31 | -3.002329 | hypothetical protein | |
| E4F39_14955 | 3 | 20 | -5.299765 | LysR family transcriptional regulator | |
| E4F39_14960 | 2 | 17 | -4.941933 | MFS transporter | |
| E4F39_14965 | 2 | 11 | -5.126213 | adenylosuccinate lyase | |
| E4F39_14970 | 3 | 11 | -6.118434 | gluconokinase | |
| E4F39_14975 | 2 | 14 | -5.264995 | gluconate permease | |
| E4F39_14980 | 1 | 14 | -4.936570 | bifunctional 4-hydroxy-2-oxoglutarate | |
| E4F39_14985 | -1 | 13 | -3.170102 | phosphogluconate dehydratase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14975 | ACRIFLAVINRP | 25 | 0.039 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14980 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15015 | TCRTETB | 35 | 5e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 41 | E4F39_15180 | E4F39_15250 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_15180 | 4 | 15 | 0.799557 | CinA family protein | |
| E4F39_15185 | 0 | 9 | -0.890449 | orotidine-5'-phosphate decarboxylase | |
| E4F39_15190 | 0 | 11 | -0.928350 | aldose 1-epimerase | |
| E4F39_15195 | 0 | 9 | -1.583388 | SDR family oxidoreductase | |
| E4F39_15200 | -2 | 10 | -1.207502 | L-arabinose ABC transporter permease AraH | |
| E4F39_15205 | -1 | 13 | -0.615255 | L-arabinose ABC transporter ATP-binding protein | |
| E4F39_15210 | 0 | 13 | 0.457177 | arabinose ABC transporter substrate-binding | |
| E4F39_15215 | 2 | 13 | 2.292963 | SDR family oxidoreductase | |
| E4F39_15220 | 4 | 14 | 0.794701 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | |
| E4F39_15225 | 3 | 14 | 1.270909 | 2-dehydro-3-deoxygalactonokinase | |
| E4F39_15230 | 2 | 13 | 0.844668 | IclR family transcriptional regulator | |
| E4F39_15235 | 2 | 14 | 1.351620 | EF-hand domain-containing protein | |
| E4F39_15240 | 3 | 15 | 1.219380 | lipoprotein | |
| E4F39_15245 | 2 | 15 | 2.057898 | hypothetical protein | |
| E4F39_15250 | 2 | 16 | 2.674170 | monofunctional biosynthetic peptidoglycan |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15240 | DHBDHDRGNASE | 123 | 3e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15250 | PF05272 | 29 | 0.040 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15260 | DHBDHDRGNASE | 135 | 7e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15295 | FLGFLIJ | 28 | 0.025 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| 42 | E4F39_15320 | E4F39_15370 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_15320 | -1 | 16 | -3.021260 | glycine zipper 2TM domain-containing protein | |
| E4F39_15325 | 0 | 16 | -0.974815 | histone H1 | |
| E4F39_15330 | -1 | 13 | -0.557736 | hypothetical protein | |
| E4F39_15335 | -1 | 11 | -0.724601 | ribonucleotide-diphosphate reductase subunit | |
| E4F39_15340 | -2 | 11 | -0.065651 | response regulator SirA | |
| E4F39_15345 | 2 | 15 | 0.732687 | ribonucleoside-diphosphate reductase subunit | |
| E4F39_15350 | 5 | 19 | 0.304674 | hypothetical protein | |
| E4F39_15355 | 3 | 15 | -3.024625 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | |
| E4F39_15360 | 3 | 16 | -3.586684 | inner membrane protein YpjD | |
| E4F39_15365 | 1 | 15 | -2.603495 | signal recognition particle protein | |
| E4F39_15370 | 1 | 16 | -3.267035 | hypoxanthine-guanine phosphoribosyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15370 | IGASERPTASE | 35 | 2e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15395 | FLAGELLIN | 26 | 0.021 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 43 | E4F39_15420 | E4F39_15460 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_15420 | -1 | 11 | -3.901715 | octaprenyl diphosphate synthase | |
| E4F39_15425 | -2 | 11 | -4.075016 | *HlyC/CorC family transporter | |
| E4F39_15430 | 1 | 14 | -4.363165 | GspE family protein | |
| E4F39_15435 | 2 | 17 | -4.160327 | type II secretion system F family protein | |
| E4F39_15440 | 0 | 12 | -3.284366 | prepilin peptidase | |
| E4F39_15445 | 0 | 11 | -3.095869 | dephospho-CoA kinase | |
| E4F39_15450 | 1 | 12 | -3.278680 | cell division protein ZapD | |
| E4F39_15455 | -1 | 12 | -3.395645 | DNA gyrase inhibitor YacG | |
| E4F39_15460 | -3 | 10 | -3.543811 | NUDIX domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15500 | BCTERIALGSPF | 257 | 3e-84 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15505 | PREPILNPTASE | 280 | 2e-96 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 44 | E4F39_15625 | E4F39_15670 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_15625 | -1 | 10 | -3.143629 | 3-oxoadipyl-CoA thiolase | |
| E4F39_15630 | 0 | 13 | -3.560686 | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA | |
| E4F39_15635 | 0 | 16 | -4.137597 | hydroxyphenylacetyl-CoA thioesterase PaaI | |
| E4F39_15640 | 0 | 16 | -4.657356 | phenylacetate--CoA ligase | |
| E4F39_15645 | 0 | 17 | -5.059411 | murein transglycosylase | |
| E4F39_15650 | 1 | 19 | -5.866489 | hypothetical protein | |
| E4F39_15655 | 1 | 25 | -6.373453 | Co2+/Mg2+ efflux protein ApaG | |
| E4F39_15660 | 2 | 34 | -7.297712 | hypothetical protein | |
| E4F39_15670 | 1 | 23 | -5.368641 | ribulose-phosphate 3-epimerase |
| 45 | E4F39_15855 | E4F39_15920 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_15855 | 2 | 13 | 0.219156 | hypothetical protein | |
| E4F39_15860 | 1 | 12 | 0.799400 | hypothetical protein | |
| E4F39_15865 | 1 | 15 | 1.560272 | glutamyl-tRNA reductase | |
| E4F39_15870 | 3 | 17 | 1.856749 | peptide chain release factor 1 | |
| E4F39_15875 | 6 | 21 | 3.615213 | peptide chain release factor N(5)-glutamine | |
| E4F39_15880 | 7 | 21 | 4.640466 | Grx4 family monothiol glutaredoxin | |
| E4F39_15885 | -1 | 10 | 1.372376 | UbiX family flavin prenyltransferase | |
| E4F39_15890 | 0 | 12 | 1.507798 | dioxygenase | |
| E4F39_15895 | 0 | 10 | 1.007262 | APC family permease | |
| E4F39_15900 | 0 | 12 | 0.386148 | cold-shock protein | |
| E4F39_15905 | -2 | 10 | 1.093214 | branched-chain amino acid ABC transporter | |
| E4F39_15915 | -2 | 12 | 3.231127 | Hsp70 family protein | |
| E4F39_15920 | -2 | 13 | 3.163385 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_15995 | SHAPEPROTEIN | 37 | 7e-05 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 46 | E4F39_16045 | E4F39_16085 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_16045 | 2 | 20 | 0.450673 | hypothetical protein | |
| E4F39_16050 | 3 | 20 | -0.615663 | HlyD family efflux transporter periplasmic | |
| E4F39_16055 | -1 | 13 | -2.475022 | peptidase domain-containing ABC transporter | |
| E4F39_16060 | 2 | 15 | -2.362256 | TolC family protein | |
| E4F39_16065 | 1 | 18 | -3.667146 | flagellar protein FliO | |
| E4F39_16070 | 1 | 20 | -4.437828 | M15 family peptidase | |
| E4F39_16075 | 1 | 21 | -4.642407 | hypothetical protein | |
| E4F39_16080 | 2 | 21 | -4.141197 | type VI secretion system-associated protein | |
| E4F39_16085 | 4 | 39 | -3.896544 | OmpA family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16115 | RTXTOXIND | 132 | 2e-36 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16160 | OMPADOMAIN | 92 | 3e-23 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 47 | E4F39_16175 | E4F39_16295 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_16175 | 2 | 10 | -2.905218 | hypothetical protein | |
| E4F39_16180 | 3 | 10 | -3.092170 | S8 family peptidase | |
| E4F39_16185 | 3 | 14 | -3.957418 | AAA family ATPase | |
| E4F39_16190 | 2 | 13 | -3.449666 | *ClpXP protease specificity-enhancing factor | |
| E4F39_16195 | 3 | 12 | -3.283190 | glutathione S-transferase | |
| E4F39_16200 | 3 | 12 | -2.578179 | cytochrome c1 | |
| E4F39_16205 | 2 | 12 | -1.894046 | cytochrome bc complex cytochrome b subunit | |
| E4F39_16210 | 3 | 18 | -5.077327 | ubiquinol-cytochrome c reductase iron-sulfur | |
| E4F39_16215 | 3 | 16 | -4.449361 | Nif3-like dinuclear metal center hexameric | |
| E4F39_16220 | 6 | 23 | -4.702738 | Do family serine endopeptidase | |
| E4F39_16225 | 7 | 30 | -5.694500 | hypothetical protein | |
| E4F39_16230 | 6 | 34 | -7.006860 | twin-arginine translocase subunit TatC | |
| E4F39_16235 | 8 | 51 | -10.712245 | Sec-independent protein translocase subunit | |
| E4F39_16240 | 7 | 51 | -10.475480 | Sec-independent protein translocase subunit | |
| E4F39_16245 | 8 | 56 | -11.667211 | histidine triad nucleotide-binding protein | |
| E4F39_16250 | 9 | 56 | -11.854061 | hypothetical protein | |
| E4F39_16255 | 7 | 52 | -11.881636 | phosphoribosyl-ATP diphosphatase | |
| E4F39_16260 | 7 | 48 | -11.280531 | phosphoribosyl-AMP cyclohydrolase | |
| E4F39_16265 | 3 | 23 | -8.421600 | imidazole glycerol phosphate synthase subunit | |
| E4F39_16270 | 3 | 15 | -6.378715 | 1-(5-phosphoribosyl)-5-((5- | |
| E4F39_16280 | 1 | 12 | -5.877618 | imidazole glycerol phosphate synthase subunit | |
| E4F39_16285 | 0 | 9 | -5.132833 | YchE family NAAT transporter | |
| E4F39_16290 | 1 | 9 | -4.150428 | imidazoleglycerol-phosphate dehydratase HisB | |
| E4F39_16295 | 1 | 10 | -3.554674 | histidinol-phosphate transaminase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16260 | SUBTILISIN | 74 | 3e-16 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16310 | V8PROTEASE | 68 | 9e-15 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16325 | TATBPROTEIN | 77 | 2e-20 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
| 48 | E4F39_17025 | E4F39_17170 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_17025 | 2 | 12 | -1.264686 | amino acid permease | |
| E4F39_17035 | 2 | 11 | -0.618648 | *c-type cytochrome | |
| E4F39_17040 | 0 | 10 | 1.013079 | BON domain-containing protein | |
| E4F39_17050 | -3 | 11 | 1.955405 | SIS domain-containing protein | |
| E4F39_17055 | -3 | 11 | 2.597287 | YraN family protein | |
| E4F39_17060 | -2 | 11 | 3.077695 | 16S rRNA | |
| E4F39_17065 | -1 | 10 | 2.404972 | septal ring lytic transglycosylase RlpA family | |
| E4F39_17070 | 3 | 17 | -1.545090 | hypothetical protein | |
| E4F39_17075 | 3 | 18 | -1.597076 | MBL fold metallo-hydrolase | |
| E4F39_17080 | 5 | 29 | -3.221317 | exonuclease | |
| E4F39_17085 | 5 | 28 | -2.972088 | Lrp/AsnC family transcriptional regulator | |
| E4F39_17090 | 7 | 38 | -3.599364 | cation transporter | |
| E4F39_17095 | 3 | 23 | -3.540947 | H-NS histone family protein | |
| E4F39_17100 | 4 | 15 | -1.662564 | hypothetical protein | |
| E4F39_17105 | 2 | 16 | -1.349281 | pyridoxamine 5'-phosphate oxidase | |
| E4F39_17110 | 3 | 14 | -0.793755 | MFS transporter | |
| E4F39_17120 | -3 | 12 | 0.228846 | branched-chain amino acid ABC transporter | |
| E4F39_17130 | -3 | 12 | 1.372622 | phosphoheptose isomerase | |
| E4F39_17135 | -1 | 14 | 0.619769 | nitronate monooxygenase | |
| E4F39_17140 | 0 | 13 | 0.459452 | hypothetical protein | |
| E4F39_17145 | 2 | 14 | 0.094854 | dienelactone hydrolase family protein | |
| E4F39_17150 | 0 | 13 | -1.343446 | amidase | |
| E4F39_17155 | -2 | 13 | -2.435898 | methylenetetrahydrofolate reductase [NAD(P)H] | |
| E4F39_17160 | 0 | 14 | -2.924301 | phage holin family protein | |
| E4F39_17165 | 0 | 17 | -4.380733 | adenosylhomocysteinase | |
| E4F39_17170 | 0 | 18 | -4.098135 | RNA polymerase sigma factor FliA |
| 49 | E4F39_17315 | E4F39_17395 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_17315 | 2 | 13 | 1.221518 | aquaporin Z | |
| E4F39_17320 | 2 | 14 | 0.976032 | Cof-type HAD-IIB family hydrolase | |
| E4F39_17325 | 3 | 13 | -0.563858 | DNA-3-methyladenine glycosylase I | |
| E4F39_17330 | 1 | 12 | -0.984067 | hypothetical protein | |
| E4F39_17335 | 0 | 13 | -3.704507 | 30S ribosomal protein S21 | |
| E4F39_17340 | 0 | 13 | -3.612425 | flagellin | |
| E4F39_17345 | 2 | 17 | -4.370549 | flagellar hook protein FliD | |
| E4F39_17350 | 6 | 26 | -5.795078 | flagellar protein FliT | |
| E4F39_17355 | 5 | 24 | -4.583694 | glycosyltransferase | |
| E4F39_17360 | 2 | 20 | -3.680913 | DegT/DnrJ/EryC1/StrS family aminotransferase | |
| E4F39_17365 | 1 | 20 | -0.901377 | ketoacyl-ACP synthase III | |
| E4F39_17370 | 0 | 17 | -0.661336 | acyl carrier protein | |
| E4F39_17375 | 1 | 18 | -0.044255 | ketoacyl-ACP synthase III | |
| E4F39_17380 | 0 | 15 | 0.698587 | SDR family oxidoreductase | |
| E4F39_17385 | -1 | 16 | -0.312011 | acetyltransferase | |
| E4F39_17390 | 2 | 15 | 0.001234 | Rieske (2Fe-2S) protein | |
| E4F39_17395 | 3 | 15 | -1.858932 | methyltransferase domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17410 | FLAGELLIN | 132 | 3e-36 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17425 | SYCDCHAPRONE | 37 | 1e-04 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17450 | DHBDHDRGNASE | 97 | 3e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 50 | E4F39_17450 | E4F39_17625 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_17450 | -1 | 16 | -3.744311 | hypothetical protein | |
| E4F39_17455 | -1 | 16 | -4.716803 | alpha/beta fold hydrolase | |
| E4F39_17460 | -1 | 18 | -4.875061 | methyl-accepting chemotaxis protein | |
| E4F39_17465 | -1 | 13 | -2.844248 | histidinol dehydrogenase | |
| E4F39_17470 | 1 | 16 | 0.141421 | FAD-binding oxidoreductase | |
| E4F39_17475 | -1 | 11 | 1.163142 | hypothetical protein | |
| E4F39_17480 | -1 | 10 | 0.721794 | chitin-binding protein | |
| E4F39_17485 | 0 | 8 | 0.032351 | hypothetical protein | |
| E4F39_17490 | 0 | 7 | 0.005311 | DUF3396 domain-containing protein | |
| E4F39_17495 | 2 | 13 | 0.026129 | VRR-NUC domain-containing protein | |
| E4F39_17500 | -2 | 10 | -0.156343 | PAAR domain-containing protein | |
| E4F39_17510 | 2 | 12 | 0.085058 | hypothetical protein | |
| E4F39_17515 | 3 | 10 | -0.370257 | XRE family transcriptional regulator | |
| E4F39_17520 | 2 | 11 | -0.773136 | site-specific integrase | |
| E4F39_17530 | 1 | 12 | -2.230388 | hypothetical protein | |
| E4F39_17535 | 1 | 20 | -4.124501 | *cytochrome c5 family protein | |
| E4F39_17540 | 0 | 23 | -4.985977 | ATP-dependent DNA helicase Rep | |
| E4F39_17545 | 3 | 36 | -6.869791 | hypothetical protein | |
| E4F39_17550 | 6 | 41 | -7.485668 | SGNH/GDSL hydrolase family protein | |
| E4F39_17555 | 6 | 52 | -11.594778 | oxidoreductase | |
| E4F39_17560 | 6 | 55 | -12.465568 | hypothetical protein | |
| E4F39_17565 | 7 | 58 | -12.595099 | glycine cleavage system aminomethyltransferase | |
| E4F39_17570 | 8 | 62 | -12.976907 | glycine cleavage system protein GcvH | |
| E4F39_17575 | 8 | 63 | -13.561106 | glycine dehydrogenase | |
| E4F39_17580 | 10 | 60 | -13.257264 | ubiquinol-cytochrome C reductase | |
| E4F39_17585 | 10 | 45 | -6.260265 | alginate lyase | |
| E4F39_17590 | 4 | 21 | -4.410601 | L-serine ammonia-lyase | |
| E4F39_17595 | 3 | 19 | -2.167027 | thiamine pyrophosphate-binding protein | |
| E4F39_17600 | 1 | 16 | 0.025199 | ADP-heptose--LPS heptosyltransferase | |
| E4F39_17615 | -1 | 14 | 1.206197 | helix-turn-helix domain-containing protein | |
| E4F39_17620 | -2 | 10 | 1.291953 | CarR | |
| E4F39_17625 | -1 | 12 | 3.163273 | aldehyde dehydrogenase family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17625 | OMADHESIN | 28 | 0.045 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17645 | PF05272 | 27 | 0.030 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17675 | PHPHTRNFRASE | 31 | 0.006 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 51 | E4F39_17860 | E4F39_17990 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_17860 | 1 | 18 | -3.020861 | ParA family protein | |
| E4F39_17865 | -1 | 15 | -3.716136 | 16S rRNA (guanine(527)-N(7))-methyltransferase | |
| E4F39_17870 | -1 | 17 | -3.929231 | tRNA uridine-5-carboxymethylaminomethyl(34) | |
| E4F39_17875 | 0 | 15 | -5.020407 | ABC transporter ATP-binding protein | |
| E4F39_17880 | -1 | 14 | -4.690982 | branched-chain amino acid ABC transporter | |
| E4F39_17885 | 1 | 16 | -4.128096 | branched-chain amino acid ABC transporter | |
| E4F39_17890 | 1 | 17 | -3.782380 | ABC transporter substrate-binding protein | |
| E4F39_17895 | 2 | 23 | -4.710183 | hypothetical protein | |
| E4F39_17900 | 2 | 25 | -4.940931 | branched-chain amino acid ABC transporter | |
| E4F39_17905 | 1 | 20 | -5.002490 | branched-chain amino acid ABC transporter | |
| E4F39_17910 | 2 | 21 | -4.563182 | ABC transporter substrate-binding protein | |
| E4F39_17915 | 2 | 19 | -3.654179 | ABC transporter ATP-binding protein | |
| E4F39_17920 | 0 | 16 | -3.607809 | ABC transporter ATP-binding protein | |
| E4F39_17925 | 0 | 17 | -3.992313 | methyltransferase | |
| E4F39_17930 | -1 | 18 | -3.808487 | hypothetical protein | |
| E4F39_17935 | 1 | 23 | -4.438957 | choline dehydrogenase | |
| E4F39_17940 | 0 | 23 | -4.835641 | hypothetical protein | |
| E4F39_17945 | 2 | 25 | -5.227238 | CoA-acylating methylmalonate-semialdehyde | |
| E4F39_17950 | 1 | 25 | -5.113779 | hypothetical protein | |
| E4F39_17960 | 1 | 22 | -3.567326 | CYTH domain-containing protein | |
| E4F39_17965 | 0 | 18 | -2.374877 | Lrp/AsnC family transcriptional regulator | |
| E4F39_17970 | -1 | 14 | -2.147724 | phenylalanine 4-monooxygenase | |
| E4F39_17975 | -3 | 12 | -2.083125 | 4a-hydroxytetrahydrobiopterin dehydratase | |
| E4F39_17980 | -3 | 12 | -1.874983 | DUF3717 domain-containing protein | |
| E4F39_17985 | -1 | 11 | -2.115368 | response regulator transcription factor | |
| E4F39_17990 | -1 | 11 | -3.425789 | sensor histidine kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18075 | HTHFIS | 81 | 7e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 52 | E4F39_18195 | E4F39_18280 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_18195 | 0 | 11 | 3.591327 | flagellar biosynthetic protein FliO | |
| E4F39_18200 | 0 | 12 | 3.275957 | flagellar type III secretion system pore protein | |
| E4F39_18205 | -3 | 10 | 0.864230 | flagellar biosynthesis protein FliQ | |
| E4F39_18210 | -3 | 11 | 1.619598 | flagellar biosynthetic protein FliR | |
| E4F39_18215 | -2 | 13 | 1.752736 | MerR family transcriptional regulator | |
| E4F39_18220 | -1 | 11 | 0.878732 | class I SAM-dependent methyltransferase | |
| E4F39_18225 | -1 | 9 | 0.068138 | transporter substrate-binding domain-containing | |
| E4F39_18230 | -1 | 9 | 0.114085 | ABC transporter ATP-binding protein | |
| E4F39_18235 | 0 | 12 | 2.473273 | ABC transporter permease | |
| E4F39_18240 | 2 | 14 | 1.120917 | sensor histidine kinase | |
| E4F39_18245 | 2 | 16 | 1.507726 | response regulator | |
| E4F39_18250 | 1 | 13 | 1.023802 | porin | |
| E4F39_18255 | 0 | 12 | 0.438384 | hypothetical protein | |
| E4F39_18265 | 0 | 10 | 0.072672 | site-specific DNA-methyltransferase | |
| E4F39_18275 | 2 | 12 | -1.466486 | restriction endonuclease subunit R | |
| E4F39_18280 | 2 | 12 | -1.086497 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18295 | FLGBIOSNFLIP | 291 | e-102 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18300 | TYPE3IMQPROT | 69 | 4e-19 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18305 | TYPE3IMRPROT | 161 | 7e-51 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18340 | PF06580 | 54 | 3e-10 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18345 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18350 | ECOLNEIPORIN | 64 | 1e-13 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| 53 | E4F39_18515 | E4F39_18705 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_18515 | 2 | 17 | 0.100877 | 50S ribosomal protein L34 | |
| E4F39_18520 | 2 | 17 | 2.270690 | ribonuclease P protein component | |
| E4F39_18525 | -1 | 15 | 2.387280 | membrane protein insertion efficiency factor | |
| E4F39_18530 | 0 | 16 | 2.943723 | membrane protein insertase YidC | |
| E4F39_18535 | 2 | 23 | 2.192714 | transcriptional regulator | |
| E4F39_18540 | 2 | 23 | 1.946652 | tRNA uridine-5-carboxymethylaminomethyl(34) | |
| E4F39_18545 | -2 | 14 | -0.931281 | DUF4102 domain-containing protein | |
| E4F39_18550 | -1 | 16 | -2.226524 | DUF927 domain-containing protein | |
| E4F39_18555 | -1 | 13 | -3.004926 | hypothetical protein | |
| E4F39_18560 | 0 | 11 | -3.705763 | hypothetical protein | |
| E4F39_18565 | 0 | 13 | -3.689285 | hypothetical protein | |
| E4F39_18570 | 0 | 12 | -3.319388 | hypothetical protein | |
| E4F39_18575 | 2 | 15 | -2.894281 | AlpA family phage regulatory protein | |
| E4F39_18580 | 0 | 13 | -3.306809 | hypothetical protein | |
| E4F39_18585 | 1 | 13 | -3.361078 | hypothetical protein | |
| E4F39_18590 | -1 | 15 | -2.534324 | recombinase family protein | |
| E4F39_18595 | -1 | 18 | -3.881120 | hypothetical protein | |
| E4F39_18600 | -1 | 20 | -4.483940 | DUF4382 domain-containing protein | |
| E4F39_18605 | 0 | 17 | -3.461306 | lipoprotein | |
| E4F39_18610 | 0 | 21 | -3.340569 | hypothetical protein | |
| E4F39_18615 | 0 | 20 | -3.159991 | spermidine N1-acetyltransferase | |
| E4F39_18620 | 1 | 22 | -4.054540 | hypothetical protein | |
| E4F39_18625 | 1 | 18 | -2.384260 | YaeQ family protein | |
| E4F39_18630 | 1 | 17 | -1.988449 | VOC family protein | |
| E4F39_18635 | 3 | 29 | -5.560000 | hypothetical protein | |
| E4F39_18640 | 3 | 34 | -6.254805 | bifunctional DNA-binding transcriptional | |
| E4F39_18645 | 3 | 41 | -7.595286 | DNA-3-methyladenine glycosylase 2 family | |
| E4F39_18650 | 4 | 43 | -8.203856 | glutamate--cysteine ligase | |
| E4F39_18655 | 6 | 61 | -13.456536 | RNA polymerase sigma factor RpoD/SigA | |
| E4F39_18660 | 7 | 59 | -13.007682 | hypothetical protein | |
| E4F39_18665 | 5 | 48 | -10.922446 | histone deacetylase | |
| E4F39_18670 | 5 | 49 | -11.491789 | periplasmic heavy metal sensor | |
| E4F39_18675 | 5 | 49 | -11.354553 | LysR family transcriptional regulator | |
| E4F39_18680 | 4 | 45 | -11.632106 | polyamine ABC transporter substrate-binding | |
| E4F39_18685 | 1 | 24 | -6.886230 | class II histone deacetylase | |
| E4F39_18690 | 1 | 19 | -5.194096 | N-carbamoylputrescine amidase | |
| E4F39_18695 | 0 | 24 | -5.437887 | hypothetical protein | |
| E4F39_18700 | -1 | 24 | -4.580772 | phage portal protein | |
| E4F39_18705 | -1 | 24 | -5.098990 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18605 | 60KDINNERMP | 490 | e-171 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18615 | PF05272 | 37 | 2e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18705 | SACTRNSFRASE | 41 | 8e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18785 | MALTOSEBP | 30 | 0.018 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 54 | E4F39_18800 | E4F39_18895 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_18800 | 3 | 18 | -4.355343 | DUF4390 domain-containing protein | |
| E4F39_18805 | 3 | 18 | -5.710799 | PAS domain-containing sensor histidine kinase | |
| E4F39_18810 | 3 | 24 | -6.524486 | response regulator | |
| E4F39_18815 | 7 | 42 | -9.529433 | *hypothetical protein | |
| E4F39_18820 | 6 | 43 | -9.318294 | 7-cyano-7-deazaguanine synthase QueC | |
| E4F39_18825 | 2 | 28 | -6.120396 | 7-carboxy-7-deazaguanine synthase | |
| E4F39_18830 | 2 | 25 | -4.461547 | 6-carboxytetrahydropterin synthase QueD | |
| E4F39_18835 | 1 | 17 | -3.215076 | hypothetical protein | |
| E4F39_18840 | 0 | 12 | -1.867850 | sel1 repeat family protein | |
| E4F39_18850 | -1 | 11 | -0.377689 | rod shape-determining protein RodA | |
| E4F39_18855 | 1 | 11 | -1.411294 | penicillin-binding protein 2 | |
| E4F39_18860 | 2 | 14 | -1.968489 | rod shape-determining protein MreD | |
| E4F39_18865 | 1 | 13 | -0.746899 | rod shape-determining protein | |
| E4F39_18870 | 0 | 13 | -1.108328 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase | |
| E4F39_18875 | 1 | 14 | -0.173958 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase | |
| E4F39_18880 | 0 | 13 | -0.471521 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase | |
| E4F39_18885 | 0 | 14 | 0.779680 | polyphosphate kinase 2 family protein | |
| E4F39_18890 | 2 | 14 | 1.301032 | exodeoxyribonuclease III | |
| E4F39_18895 | 2 | 12 | 0.882692 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18935 | HTHFIS | 108 | 1e-29 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18990 | cloacin | 31 | 0.024 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19005 | SHAPEPROTEIN | 504 | 0.0 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19020 | TYPE4SSCAGA | 31 | 0.013 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 55 | E4F39_19230 | E4F39_19315 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_19230 | -1 | 11 | 3.545348 | hypothetical protein | |
| E4F39_19240 | 1 | 13 | 3.178015 | hypothetical protein | |
| E4F39_19245 | 2 | 15 | 1.658785 | NAD(P)/FAD-dependent oxidoreductase | |
| E4F39_19250 | 3 | 13 | 1.291240 | iron-sulfur protein | |
| E4F39_19255 | 1 | 13 | 0.281516 | MFS transporter | |
| E4F39_19260 | 1 | 10 | 2.296920 | hypothetical protein | |
| E4F39_19265 | -1 | 10 | 3.682554 | ABC transporter substrate-binding protein | |
| E4F39_19270 | 2 | 10 | 4.334194 | ABC transporter permease subunit | |
| E4F39_19275 | 0 | 10 | 4.675785 | ABC transporter permease subunit | |
| E4F39_19280 | -2 | 9 | 3.827632 | ABC transporter ATP-binding protein | |
| E4F39_19285 | -1 | 10 | 3.157137 | TraB/GumN family protein | |
| E4F39_19290 | -1 | 12 | 2.123050 | DUF979 domain-containing protein | |
| E4F39_19295 | 1 | 13 | 1.005564 | DUF969 domain-containing protein | |
| E4F39_19300 | 0 | 14 | 1.330557 | 5-oxoprolinase subunit PxpA | |
| E4F39_19305 | 0 | 15 | 1.318465 | biotin-dependent carboxyltransferase family | |
| E4F39_19310 | -2 | 14 | 2.244047 | 5-oxoprolinase subunit PxpB | |
| E4F39_19315 | -2 | 13 | 3.206641 | MarR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19360 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 56 | E4F39_19375 | E4F39_19565 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_19375 | 3 | 13 | 0.587859 | flagellar basal body rod protein FlgB | |
| E4F39_19380 | 2 | 12 | 1.292142 | flagellar basal body rod protein FlgC | |
| E4F39_19385 | 1 | 11 | 1.813598 | flagellar hook assembly protein FlgD | |
| E4F39_19390 | -1 | 10 | 2.467410 | flagellar hook protein FlgE | |
| E4F39_19395 | -1 | 10 | 3.390180 | flagellar basal-body rod protein FlgF | |
| E4F39_19400 | 0 | 11 | 3.451113 | flagellar basal-body rod protein FlgG | |
| E4F39_19405 | -2 | 11 | 3.250986 | flagellar basal body L-ring protein FlgH | |
| E4F39_19410 | -1 | 10 | 3.568488 | flagellar basal body P-ring protein FlgI | |
| E4F39_19415 | -1 | 11 | 1.965309 | flagellar assembly peptidoglycan hydrolase FlgJ | |
| E4F39_19420 | 0 | 11 | 2.519285 | flagellar brake protein | |
| E4F39_19425 | 0 | 10 | 1.932941 | flagellar hook-associated protein FlgK | |
| E4F39_19430 | 1 | 11 | 2.134904 | flagellar hook-associated protein 3 | |
| E4F39_19435 | 2 | 12 | 2.816379 | hypothetical protein | |
| E4F39_19440 | 0 | 10 | 2.392845 | pyrimidine utilization transport protein G | |
| E4F39_19445 | 1 | 12 | 3.099340 | hypothetical protein | |
| E4F39_19450 | 1 | 14 | 2.142501 | transcriptional regulator GcvA | |
| E4F39_19455 | 1 | 16 | 1.955814 | hypothetical protein | |
| E4F39_19460 | 4 | 29 | 0.540961 | chromate transporter | |
| E4F39_19465 | 5 | 21 | 4.401076 | chromate transporter | |
| E4F39_19470 | 2 | 16 | 4.223492 | hypothetical protein | |
| E4F39_19480 | -1 | 12 | 2.881774 | hypothetical protein | |
| E4F39_19485 | 2 | 11 | 1.334152 | alkylphosphonate utilization protein | |
| E4F39_19490 | 2 | 11 | 1.078975 | DUF1275 domain-containing protein | |
| E4F39_19495 | 5 | 17 | -2.013904 | hypothetical protein | |
| E4F39_19500 | 4 | 19 | -1.955145 | glyoxalase | |
| E4F39_19505 | 4 | 21 | -1.004309 | porin | |
| E4F39_19510 | 0 | 21 | -1.015315 | hypothetical protein | |
| E4F39_19515 | -1 | 19 | -0.225274 | hypothetical protein | |
| E4F39_19520 | 1 | 18 | -0.207098 | hypothetical protein | |
| E4F39_19525 | 2 | 18 | 0.022580 | HpnL family protein | |
| E4F39_19530 | 2 | 16 | 0.214240 | glycosyltransferase | |
| E4F39_19535 | 1 | 13 | -0.014554 | carbohydrate porin | |
| E4F39_19540 | 2 | 12 | 0.395483 | hypothetical protein | |
| E4F39_19545 | 2 | 12 | 0.816775 | hypothetical protein | |
| E4F39_19550 | 0 | 13 | 1.128014 | divalent metal cation transporter | |
| E4F39_19555 | 1 | 14 | 2.248221 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |
| E4F39_19560 | 2 | 14 | 1.908864 | hypothetical protein | |
| E4F39_19565 | 3 | 15 | 2.944807 | glutathione-disulfide reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19500 | FLGHOOKAP1 | 27 | 0.029 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19510 | FLGHOOKAP1 | 34 | 0.001 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19515 | FLGHOOKAP1 | 29 | 0.018 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19520 | FLGHOOKAP1 | 42 | 1e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19525 | FLGLRINGFLGH | 206 | 3e-69 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19530 | FLGPRINGFLGI | 363 | e-127 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19535 | FLGFLGJ | 227 | 4e-75 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19545 | FLGHOOKAP1 | 231 | 4e-70 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19550 | FLAGELLIN | 41 | 6e-06 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19585 | ACRIFLAVINRP | 28 | 0.021 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19620 | ECOLNEIPORIN | 68 | 6e-15 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| 57 | E4F39_19745 | E4F39_19830 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_19745 | 2 | 8 | 2.058013 | bile acid:sodium symporter | |
| E4F39_19750 | 2 | 8 | 1.812757 | hypothetical protein | |
| E4F39_19755 | 1 | 8 | 2.113422 | porin | |
| E4F39_19760 | 1 | 9 | 1.842503 | LysR family transcriptional regulator | |
| E4F39_19765 | 0 | 7 | 0.695000 | hypothetical protein | |
| E4F39_19775 | -1 | 11 | 1.244670 | nitronate monooxygenase | |
| E4F39_19780 | -1 | 10 | 1.830586 | alpha/beta hydrolase | |
| E4F39_19785 | -2 | 9 | 0.740358 | Lrp/AsnC family transcriptional regulator | |
| E4F39_19790 | -1 | 10 | 0.922630 | DMT family transporter | |
| E4F39_19795 | -2 | 12 | 3.896951 | YbaK/EbsC family protein | |
| E4F39_19800 | -1 | 10 | 4.305737 | hydroxymethylglutaryl-CoA lyase | |
| E4F39_19805 | -2 | 10 | 3.287931 | glyoxylate/hydroxypyruvate reductase A | |
| E4F39_19810 | -2 | 13 | 2.364791 | glyoxalase/bleomycin resistance | |
| E4F39_19815 | 0 | 15 | 4.061341 | alpha/beta hydrolase | |
| E4F39_19820 | 0 | 16 | 4.058677 | NUDIX domain-containing protein | |
| E4F39_19825 | 0 | 16 | 2.526544 | hypothetical protein | |
| E4F39_19830 | 0 | 17 | 3.186934 | Lrp/AsnC family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19880 | ECOLNEIPORIN | 71 | 5e-16 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19905 | HTHFIS | 27 | 0.042 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 58 | E4F39_19955 | E4F39_20020 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_19955 | 2 | 14 | 1.722051 | EAL domain-containing protein | |
| E4F39_19960 | -1 | 15 | -0.545246 | hypothetical protein | |
| E4F39_19965 | 0 | 18 | -2.463584 | hypothetical protein | |
| E4F39_19970 | 1 | 20 | -3.207818 | hypothetical protein | |
| E4F39_19975 | 2 | 22 | -3.124196 | alkaline phosphatase | |
| E4F39_19980 | 2 | 22 | -3.224126 | alkaline phosphatase | |
| E4F39_19985 | 2 | 23 | -3.831943 | hypothetical protein | |
| E4F39_19990 | 2 | 23 | -3.269486 | biotin synthase BioB | |
| E4F39_19995 | 4 | 34 | -3.387892 | dethiobiotin synthase | |
| E4F39_20000 | 3 | 31 | -4.504702 | 8-amino-7-oxononanoate synthase | |
| E4F39_20005 | 4 | 31 | -4.765571 | adenosylmethionine--8-amino-7-oxononanoate | |
| E4F39_20010 | 5 | 36 | -6.385437 | hypothetical protein | |
| E4F39_20015 | 5 | 34 | -5.675942 | SDR family oxidoreductase | |
| E4F39_20020 | 3 | 33 | -5.351273 | acetyl-CoA C-acyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_20105 | adhesinb | 29 | 0.036 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_20160 | DHBDHDRGNASE | 39 | 5e-06 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 59 | E4F39_20220 | E4F39_20360 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_20220 | 2 | 11 | -1.217664 | ATP-binding cassette domain-containing protein | |
| E4F39_20225 | 4 | 12 | -1.934991 | MCE family protein | |
| E4F39_20230 | -1 | 13 | -1.842670 | ABC transporter | |
| E4F39_20235 | -1 | 13 | -2.025175 | teicoplanin resistance protein VanZ | |
| E4F39_20245 | -1 | 12 | -3.149425 | (2Fe-2S) ferredoxin domain-containing protein | |
| E4F39_20250 | 0 | 12 | -1.219302 | alpha/beta hydrolase | |
| E4F39_20255 | -1 | 12 | -0.464960 | hypothetical protein | |
| E4F39_20265 | -1 | 12 | 1.592644 | D-alanyl-D-alanine carboxypeptidase | |
| E4F39_20270 | -1 | 11 | 2.283014 | D-amino acid aminotransferase | |
| E4F39_20275 | 1 | 10 | 3.344418 | DUF493 family protein | |
| E4F39_20280 | 1 | 11 | 3.157201 | transcriptional regulator GcvA | |
| E4F39_20285 | 1 | 12 | 3.259136 | DUF2917 domain-containing protein | |
| E4F39_20290 | 1 | 12 | 2.173870 | lipoyl(octanoyl) transferase LipB | |
| E4F39_20295 | 1 | 10 | 1.566669 | lipoyl synthase | |
| E4F39_20305 | -1 | 14 | 1.973799 | hypothetical protein | |
| E4F39_20310 | -1 | 13 | 3.174266 | gamma-glutamyltransferase | |
| E4F39_20315 | -1 | 14 | 4.132238 | hypothetical protein | |
| E4F39_20320 | -2 | 14 | 3.602161 | LysR family transcriptional regulator | |
| E4F39_20325 | -2 | 13 | 3.624160 | enoyl-CoA hydratase | |
| E4F39_20335 | 0 | 14 | 2.525710 | pimeloyl-CoA dehydrogenase large subunit | |
| E4F39_20340 | 1 | 16 | 2.070520 | pimeloyl-CoA dehydrogenase small subunit | |
| E4F39_20345 | 1 | 16 | 1.960301 | CoA transferase | |
| E4F39_20350 | 2 | 16 | 2.753902 | DUF485 domain-containing protein | |
| E4F39_20355 | 0 | 14 | 2.659636 | cation acetate symporter | |
| E4F39_20360 | -3 | 11 | 3.206605 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_20380 | PF06057 | 29 | 0.013 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_20410 | FbpA_PF05833 | 28 | 0.007 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_20440 | HTHFIS | 31 | 0.006 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 60 | E4F39_01655 | E4F39_01690 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_01655 | -3 | 10 | 1.082243 | DegQ family serine endoprotease | |
| E4F39_01660 | -3 | 10 | 0.396026 | carboxypeptidase regulatory-like | |
| E4F39_01665 | -2 | 13 | 0.946863 | DUF427 domain-containing protein | |
| E4F39_01670 | 1 | 13 | -1.094920 | carbon monoxide dehydrogenase | |
| E4F39_01675 | 1 | 15 | -0.106920 | TetR family transcriptional regulator | |
| E4F39_01680 | 0 | 12 | -0.567995 | chemotaxis protein | |
| E4F39_01685 | 0 | 11 | -1.016489 | efflux RND transporter periplasmic adaptor | |
| E4F39_01690 | -2 | 11 | 0.511739 | efflux RND transporter permease subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01660 | V8PROTEASE | 79 | 4e-18 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01680 | HTHTETR | 126 | 2e-38 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01690 | RTXTOXIND | 42 | 4e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01695 | ACRIFLAVINRP | 1270 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 61 | E4F39_01785 | E4F39_01815 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_01785 | 0 | 11 | 3.180584 | sn-glycerol-3-phosphate ABC transporter | |
| E4F39_01790 | 0 | 12 | 3.803566 | hypothetical protein | |
| E4F39_01795 | 0 | 12 | 4.510914 | haloacid dehalogenase-like hydrolase | |
| E4F39_01800 | -1 | 14 | 4.457561 | LysR family transcriptional regulator | |
| E4F39_01805 | 0 | 14 | 5.341761 | serine hydrolase | |
| E4F39_01815 | 0 | 15 | 5.384680 | MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01790 | PF05272 | 30 | 0.017 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01800 | PF06776 | 30 | 0.020 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01810 | BLACTAMASEA | 30 | 0.019 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_01815 | TCRTETB | 35 | 4e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 62 | E4F39_02810 | E4F39_02840 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_02810 | 0 | 11 | 2.028698 | fused uroporphyrinogen-III synthase | |
| E4F39_02815 | -1 | 9 | 2.067149 | heme biosynthesis protein HemY | |
| E4F39_02820 | -2 | 9 | 2.523664 | MFS transporter | |
| E4F39_02825 | -2 | 11 | 1.654116 | SDR family oxidoreductase | |
| E4F39_02830 | -2 | 11 | 1.685396 | aldehyde dehydrogenase family protein | |
| E4F39_02835 | -1 | 12 | 1.743762 | inorganic diphosphatase | |
| E4F39_02840 | 1 | 12 | 2.637081 | GIY-YIG nuclease family protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02825 | RTXTOXIND | 31 | 0.021 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02835 | TCRTETB | 29 | 0.041 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02840 | DHBDHDRGNASE | 115 | 3e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_02855 | IGASERPTASE | 32 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 63 | E4F39_04305 | E4F39_04355 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_04305 | -1 | 9 | 1.041800 | SDR family oxidoreductase | |
| E4F39_04310 | 0 | 12 | 0.581454 | hypothetical protein | |
| E4F39_04315 | 2 | 15 | -0.007630 | hypothetical protein | |
| E4F39_04320 | 2 | 15 | 0.453123 | transport system membrane protein | |
| E4F39_04325 | 2 | 14 | 0.589365 | MdtB/MuxB family multidrug efflux RND | |
| E4F39_04330 | 2 | 13 | 0.550299 | MdtA/MuxA family multidrug efflux RND | |
| E4F39_04335 | 1 | 16 | 0.135772 | IclR family transcriptional regulator | |
| E4F39_04340 | 0 | 11 | -0.109662 | DUF839 domain-containing protein | |
| E4F39_04345 | 1 | 12 | 1.145070 | hypothetical protein | |
| E4F39_04350 | 1 | 12 | 1.242164 | hypothetical protein | |
| E4F39_04355 | 0 | 12 | 1.189147 | NAD-dependent epimerase/dehydratase family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04320 | PF01540 | 29 | 0.015 | Adhesin lipoprotein | |
>PF01540#Adhesin lipoprotein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04335 | ACRIFLAVINRP | 745 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04340 | ACRIFLAVINRP | 802 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04345 | RTXTOXIND | 48 | 4e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_04380 | NUCEPIMERASE | 33 | 5e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 64 | E4F39_05605 | E4F39_05645 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_05605 | -1 | 18 | -2.487496 | fimbrial biogenesis outer membrane usher | |
| E4F39_05615 | 0 | 18 | -0.640069 | SCPU domain-containing protein | |
| E4F39_05620 | 3 | 14 | 0.767991 | hypothetical protein | |
| E4F39_05625 | 4 | 10 | 2.391760 | response regulator | |
| E4F39_05630 | 4 | 11 | 2.173620 | efflux transporter outer membrane subunit | |
| E4F39_05635 | 2 | 11 | 1.751632 | DHA2 family efflux MFS transporter permease | |
| E4F39_05640 | 1 | 13 | 2.175991 | thiol:disulfide interchange protein | |
| E4F39_05645 | 1 | 13 | 1.919622 | HlyD family secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05650 | PF00577 | 455 | e-150 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05665 | HTHFIS | 63 | 1e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05685 | TCRTETB | 102 | 2e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_05695 | RTXTOXIND | 100 | 6e-25 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 65 | E4F39_06325 | E4F39_06370 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_06325 | 1 | 10 | 0.538479 | DHA2 family efflux MFS transporter permease | |
| E4F39_06335 | 1 | 11 | -0.105648 | EmrA/EmrK family multidrug efflux transporter | |
| E4F39_06340 | 2 | 11 | -1.545959 | efflux transporter outer membrane subunit | |
| E4F39_06345 | 0 | 12 | -1.116560 | MarR family transcriptional regulator | |
| E4F39_06350 | -1 | 13 | -0.510566 | hypothetical protein | |
| E4F39_06355 | -1 | 13 | -0.099700 | translational GTPase TypA | |
| E4F39_06365 | -2 | 12 | -0.451640 | 2-oxoglutarate dehydrogenase E1 component | |
| E4F39_06370 | 0 | 14 | -0.688251 | 2-oxoglutarate dehydrogenase complex |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06370 | TCRTETB | 135 | 6e-37 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06375 | RTXTOXIND | 71 | 1e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06395 | TCRTETOQM | 171 | 7e-48 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06405 | RTXTOXIND | 29 | 0.028 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 66 | E4F39_06455 | E4F39_06515 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_06455 | -2 | 12 | 0.631559 | pilus assembly protein | |
| E4F39_06460 | -2 | 11 | 2.202799 | DUF3613 domain-containing protein | |
| E4F39_06465 | -1 | 11 | 1.816148 | hypothetical protein | |
| E4F39_06470 | 1 | 13 | 2.537913 | sigma-54-dependent Fis family transcriptional | |
| E4F39_06475 | 1 | 13 | 3.141185 | DUF2968 domain-containing protein | |
| E4F39_06480 | 1 | 13 | 3.130559 | RNA chaperone Hfq | |
| E4F39_06485 | 2 | 12 | 3.760649 | hypothetical protein | |
| E4F39_06490 | 1 | 13 | 3.376733 | hypothetical protein | |
| E4F39_06495 | 0 | 12 | 3.202052 | DUF1571 domain-containing protein | |
| E4F39_06500 | 0 | 12 | 2.569986 | long-chain-fatty-acid--CoA ligase | |
| E4F39_06505 | -1 | 10 | 2.120667 | TetR/AcrR family transcriptional regulator | |
| E4F39_06515 | -2 | 11 | 0.898460 | MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06505 | PYOCINKILLER | 32 | 0.004 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06520 | HTHFIS | 297 | 3e-98 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06525 | IGASERPTASE | 28 | 0.042 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06530 | PF00577 | 29 | 0.014 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06555 | HTHTETR | 67 | 3e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06560 | TCRTETA | 60 | 4e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 67 | E4F39_06915 | E4F39_06970 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_06915 | -1 | 11 | -1.478402 | fimbrial protein | |
| E4F39_06925 | -1 | 11 | 0.698810 | Flp pilus assembly protein CpaB | |
| E4F39_06930 | 0 | 12 | 1.174901 | type II and III secretion system protein family | |
| E4F39_06935 | 2 | 11 | 2.399331 | hypothetical protein | |
| E4F39_06940 | 2 | 12 | 4.665561 | fimbrial protein | |
| E4F39_06945 | -2 | 13 | 4.124473 | CpaF family protein | |
| E4F39_06950 | -2 | 14 | 4.504368 | pilus assembly protein | |
| E4F39_06955 | -1 | 15 | 5.477275 | type II secretion system F family protein | |
| E4F39_06960 | 3 | 14 | 5.170851 | tetratricopeptide repeat protein | |
| E4F39_06965 | 2 | 15 | 4.904011 | pilus assembly protein | |
| E4F39_06970 | 4 | 17 | 4.180791 | pilus assembly protein TadE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06960 | PREPILNPTASE | 32 | 9e-04 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06970 | BCTERIALGSPD | 143 | 4e-39 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06980 | HTHFIS | 34 | 0.001 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_06985 | PF05272 | 30 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07000 | SYCDCHAPRONE | 31 | 0.004 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07010 | PYOCINKILLER | 32 | 0.004 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 68 | E4F39_07010 | E4F39_07055 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_07010 | -1 | 16 | 2.075839 | TetR family transcriptional regulator | |
| E4F39_07020 | 0 | 18 | 3.818324 | MexX/AxyX family multidrug efflux RND | |
| E4F39_07030 | -2 | 12 | 4.003969 | multidrug efflux RND transporter permease | |
| E4F39_07035 | -2 | 11 | 2.636770 | efflux transporter outer membrane subunit | |
| E4F39_07040 | -1 | 12 | 3.294201 | hypothetical protein | |
| E4F39_07045 | -2 | 11 | 2.480964 | hypothetical protein | |
| E4F39_07050 | -1 | 11 | 2.462988 | type-1 fimbrial protein | |
| E4F39_07055 | 0 | 11 | 2.583943 | fimbrial biogenesis outer membrane usher |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07050 | HTHTETR | 117 | 5e-35 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07055 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07060 | ACRIFLAVINRP | 1079 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07065 | RTXTOXIND | 33 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07090 | PF00577 | 678 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 69 | E4F39_07395 | E4F39_07430 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_07395 | 1 | 12 | 5.195949 | SDR family oxidoreductase | |
| E4F39_07400 | 1 | 12 | 5.053803 | short-chain dehydrogenase | |
| E4F39_07405 | 1 | 11 | 3.695470 | carbamate kinase | |
| E4F39_07410 | 1 | 12 | 3.503911 | ornithine carbamoyltransferase | |
| E4F39_07415 | 0 | 12 | 3.585663 | arginine deiminase | |
| E4F39_07420 | 0 | 10 | 3.130946 | arginine-ornithine antiporter | |
| E4F39_07425 | -1 | 13 | 1.570874 | RNA-binding protein | |
| E4F39_07430 | 0 | 11 | 1.769199 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07460 | DHBDHDRGNASE | 87 | 2e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07470 | CARBMTKINASE | 403 | e-144 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07480 | ARGDEIMINASE | 515 | 0.0 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07490 | PF06917 | 26 | 0.041 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07495 | FLGLRINGFLGH | 26 | 0.042 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| 70 | E4F39_07745 | E4F39_07790 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_07745 | 1 | 18 | -1.459074 | tetratricopeptide repeat protein | |
| E4F39_07750 | 2 | 17 | -1.214555 | HlyD family type I secretion periplasmic adaptor | |
| E4F39_07755 | 1 | 14 | -0.729820 | ATP-binding cassette domain-containing protein | |
| E4F39_07760 | 0 | 10 | -0.196200 | sulfotransferase | |
| E4F39_07765 | 0 | 9 | 0.132815 | hypothetical protein | |
| E4F39_07775 | -1 | 11 | -0.258754 | hemolysin | |
| E4F39_07780 | -2 | 11 | -0.508344 | TolC family protein | |
| E4F39_07790 | 1 | 14 | -1.401750 | outer membrane protein assembly factor BamE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07860 | SYCDCHAPRONE | 33 | 0.005 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07865 | RTXTOXIND | 274 | 5e-89 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07885 | INTIMIN | 47 | 1e-06 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_07895 | OMPADOMAIN | 113 | 4e-31 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 71 | E4F39_08170 | E4F39_08215 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_08170 | -3 | 11 | -0.936664 | TetR/AcrR family transcriptional regulator | |
| E4F39_08180 | -2 | 13 | 0.043820 | efflux RND transporter periplasmic adaptor | |
| E4F39_08190 | -1 | 16 | 0.977351 | efflux RND transporter permease subunit | |
| E4F39_08200 | 1 | 17 | 1.692106 | efflux transporter outer membrane subunit | |
| E4F39_08205 | 2 | 17 | 1.908158 | hypothetical protein | |
| E4F39_08210 | 1 | 15 | 1.293892 | hypothetical protein | |
| E4F39_08215 | 2 | 16 | 1.616290 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08305 | HTHTETR | 62 | 6e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08310 | RTXTOXIND | 37 | 1e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08315 | ACRIFLAVINRP | 432 | e-136 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_08340 | PF03544 | 28 | 0.027 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 72 | E4F39_09755 | E4F39_09785 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_09755 | 10 | 51 | -8.248405 | SPFH/Band 7/PHB domain protein | |
| E4F39_09760 | 11 | 51 | -8.475325 | NfeD family protein | |
| E4F39_09765 | 11 | 49 | -8.405455 | phosphoenolpyruvate synthase | |
| E4F39_09770 | 10 | 46 | -9.426587 | hypothetical protein | |
| E4F39_09775 | 9 | 46 | -9.254589 | glutathione gamma-glutamylcysteinyltransferase | |
| E4F39_09780 | 9 | 49 | -9.366435 | hypothetical protein | |
| E4F39_09785 | 4 | 25 | -7.097820 | peptidase S53 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09865 | RTXTOXINA | 30 | 0.021 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09875 | PHPHTRNFRASE | 265 | 4e-81 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09890 | INFPOTNTIATR | 25 | 0.019 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_09895 | SUBTILISIN | 41 | 7e-06 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| 73 | E4F39_09985 | E4F39_10020 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_09985 | 0 | 13 | -1.177912 | DNA repair protein RadA | |
| E4F39_09990 | -1 | 11 | -0.229028 | alanine racemase | |
| E4F39_09995 | -1 | 10 | -0.221434 | lysophospholipid transporter LplT | |
| E4F39_10000 | -1 | 9 | 0.821432 | bifunctional hydroxymethylpyrimidine | |
| E4F39_10005 | 2 | 12 | 1.382654 | serine/arginine repetitive matrix 1 | |
| E4F39_10010 | 1 | 10 | 1.710638 | DUF1853 family protein | |
| E4F39_10015 | 1 | 10 | 2.094333 | uracil-DNA glycosylase | |
| E4F39_10020 | 2 | 11 | 2.618823 | ribosomal-protein-alanine N-acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10095 | TCRTETOQM | 31 | 0.011 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10100 | ALARACEMASE | 438 | e-156 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10105 | TCRTETB | 29 | 0.049 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10115 | ECOLNEIPORIN | 39 | 2e-06 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10135 | SACTRNSFRASE | 44 | 3e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 74 | E4F39_10335 | E4F39_10405 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_10335 | -1 | 11 | 1.076526 | MFS transporter | |
| E4F39_10340 | -2 | 12 | 0.888456 | amino acid adenylation domain-containing | |
| E4F39_10345 | -1 | 12 | 0.638478 | hypothetical protein | |
| E4F39_10350 | -2 | 14 | -0.722475 | hypothetical protein | |
| E4F39_10360 | -2 | 16 | 0.584811 | hypothetical protein | |
| E4F39_10365 | -2 | 13 | 0.937749 | efflux RND transporter periplasmic adaptor | |
| E4F39_10375 | 0 | 13 | 2.110160 | ACR family transporter | |
| E4F39_10380 | -2 | 14 | 2.624604 | hypothetical protein | |
| E4F39_10385 | 0 | 13 | 1.953341 | autotransporter domain-containing protein | |
| E4F39_10390 | 0 | 14 | 1.316049 | acetyltransferase | |
| E4F39_10395 | -1 | 14 | 2.284389 | hypothetical protein | |
| E4F39_10400 | 0 | 11 | 2.589511 | hypothetical protein | |
| E4F39_10405 | 1 | 11 | 3.021616 | *aspartate kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10435 | TCRTETA | 38 | 5e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10460 | FLGHOOKFLIK | 26 | 0.024 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10465 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10470 | ACRIFLAVINRP | 755 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10480 | IGASERPTASE | 30 | 0.026 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_10505 | CARBMTKINASE | 36 | 2e-04 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 75 | E4F39_11130 | E4F39_11170 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_11130 | 0 | 14 | -1.151630 | D-alanyl-D-alanine endopeptidase | |
| E4F39_11135 | -1 | 11 | -2.490190 | hypothetical protein | |
| E4F39_11140 | -2 | 12 | -2.527563 | phasin family protein | |
| E4F39_11145 | -1 | 24 | -1.326481 | dihydrolipoyl dehydrogenase | |
| E4F39_11150 | -2 | 24 | -0.964409 | dihydrolipoyllysine-residue acetyltransferase | |
| E4F39_11155 | -3 | 38 | -0.717453 | pyruvate dehydrogenase (acetyl-transferring), | |
| E4F39_11160 | -4 | 34 | -0.326186 | PAS domain S-box protein | |
| E4F39_11170 | -4 | 28 | -1.448984 | response regulator transcription factor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_11190 | SSBTLNINHBTR | 28 | 0.026 | Streptomyces subtilisin inhibitor signature. | |
>SSBTLNINHBTR#Streptomyces subtilisin inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_11215 | RTXTOXIND | 36 | 5e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_11225 | PF06580 | 32 | 0.012 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_11230 | HTHFIS | 113 | 2e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 76 | E4F39_12240 | E4F39_12290 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_12240 | 2 | 17 | -1.638082 | transcriptional regulator | |
| E4F39_12260 | 0 | 11 | 1.093795 | FecR protein | |
| E4F39_12265 | -1 | 13 | 1.474140 | thymidylate synthase | |
| E4F39_12270 | -3 | 13 | 1.801377 | sigma-54-dependent Fis family transcriptional | |
| E4F39_12275 | -2 | 11 | 1.451536 | hypothetical protein | |
| E4F39_12280 | -2 | 11 | 0.714813 | hypothetical protein | |
| E4F39_12285 | -2 | 11 | 0.546777 | hypothetical protein | |
| E4F39_12290 | 1 | 16 | -1.142864 | sigma-54-dependent Fis family transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_12325 | adhesinmafb | 32 | 0.002 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_12330 | IGASERPTASE | 43 | 5e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_12340 | HTHFIS | 376 | e-129 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_12360 | HTHFIS | 357 | e-121 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 77 | E4F39_13425 | E4F39_13470 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_13425 | -2 | 11 | 1.500232 | NAD(P)-dependent oxidoreductase | |
| E4F39_13435 | -1 | 13 | 0.658565 | acyltransferase | |
| E4F39_13445 | -1 | 13 | 0.352649 | ABC transporter ATP-binding protein | |
| E4F39_13450 | -1 | 12 | -0.073835 | ABC transporter permease | |
| E4F39_13455 | -1 | 8 | -0.593925 | dTDP-4-dehydrorhamnose reductase | |
| E4F39_13460 | -1 | 8 | -1.988805 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| E4F39_13465 | 0 | 11 | -2.359040 | glucose-1-phosphate thymidylyltransferase | |
| E4F39_13470 | 1 | 16 | -4.012243 | dTDP-glucose 4,6-dehydratase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13515 | NUCEPIMERASE | 167 | 3e-51 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13530 | ABC2TRNSPORT | 30 | 0.007 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13535 | NUCEPIMERASE | 58 | 8e-12 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13550 | NUCEPIMERASE | 174 | 4e-54 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 78 | E4F39_13770 | E4F39_13810 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_13770 | 1 | 11 | 3.975364 | 2-hydroxyacid dehydrogenase | |
| E4F39_13775 | -1 | 10 | 3.380877 | 5,6-dimethylbenzimidazole synthase | |
| E4F39_13780 | 0 | 9 | 2.617467 | MFS transporter | |
| E4F39_13785 | -2 | 10 | 2.043148 | hypothetical protein | |
| E4F39_13795 | -2 | 10 | 2.110432 | MFS transporter | |
| E4F39_13800 | -1 | 9 | 1.679338 | fumarylacetoacetase | |
| E4F39_13805 | -2 | 10 | 1.823274 | homogentisate 1,2-dioxygenase | |
| E4F39_13810 | -1 | 9 | 2.032358 | MFS transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13855 | SECA | 34 | 0.001 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13870 | TCRTETA | 50 | 1e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13880 | TCRTETA | 47 | 9e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_13900 | TCRTETA | 44 | 9e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 79 | E4F39_14660 | E4F39_14680 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_14660 | -1 | 11 | -1.175099 | hypothetical protein | |
| E4F39_14665 | -2 | 11 | 0.750008 | YafY family transcriptional regulator | |
| E4F39_14670 | -2 | 11 | 1.872894 | NAD(P)(+) transhydrogenase (Re/Si-specific) | |
| E4F39_14675 | -3 | 10 | 1.906028 | NAD(P) transhydrogenase subunit alpha | |
| E4F39_14680 | -3 | 11 | 2.359017 | Re/Si-specific NAD(P)(+) transhydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14730 | PYOCINKILLER | 28 | 0.017 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14735 | ARGREPRESSOR | 36 | 3e-05 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14750 | TCRTETA | 30 | 0.019 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_14760 | ACRIFLAVINRP | 30 | 0.018 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 80 | E4F39_16320 | E4F39_16355 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_16320 | -2 | 11 | -2.823613 | ABC transporter permease | |
| E4F39_16325 | -3 | 13 | -2.575211 | ABC transporter ATP-binding protein | |
| E4F39_16330 | -1 | 12 | -2.369278 | hypothetical protein | |
| E4F39_16335 | 0 | 10 | -2.509746 | STAS domain-containing protein | |
| E4F39_16345 | 0 | 13 | -2.109992 | ABC transporter substrate-binding protein | |
| E4F39_16355 | -1 | 12 | -1.348099 | VacJ family lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16405 | ABC2TRNSPORT | 74 | 1e-17 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16410 | PF05272 | 28 | 0.037 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16425 | FLGMOTORFLIG | 28 | 0.026 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_16430 | VACJLIPOPROT | 223 | 3e-74 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| 81 | E4F39_17195 | E4F39_17270 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_17195 | -1 | 11 | 1.099993 | flagellar type III secretion system protein | |
| E4F39_17200 | -2 | 12 | 1.024139 | VOC family protein | |
| E4F39_17205 | -2 | 11 | 1.118779 | DUF3443 domain-containing protein | |
| E4F39_17210 | -1 | 12 | 1.936702 | DUF2844 domain-containing protein | |
| E4F39_17215 | -3 | 12 | 1.433141 | protein phosphatase CheZ | |
| E4F39_17220 | -3 | 13 | -0.888318 | chemotaxis protein CheY | |
| E4F39_17225 | -1 | 13 | -0.830136 | hypothetical protein | |
| E4F39_17230 | 0 | 13 | -0.121650 | chemotaxis response regulator protein-glutamate | |
| E4F39_17235 | -1 | 13 | -0.189735 | chemoreceptor glutamine deamidase CheD | |
| E4F39_17240 | 1 | 14 | -0.381049 | chemotaxis protein methyltransferase | |
| E4F39_17245 | 0 | 13 | 0.165112 | methyl-accepting chemotaxis protein | |
| E4F39_17255 | 0 | 11 | 1.210551 | chemotaxis protein CheW | |
| E4F39_17260 | -1 | 10 | 0.900501 | chemotaxis protein CheA | |
| E4F39_17265 | -1 | 10 | -0.035021 | response regulator | |
| E4F39_17270 | -2 | 9 | 0.003035 | flagellar motor protein MotB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17270 | TYPE3IMSPROT | 358 | e-124 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17280 | cloacin | 32 | 0.004 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17295 | HTHFIS | 86 | 5e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17305 | HTHFIS | 66 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17330 | PF06580 | 46 | 3e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17335 | HTHFIS | 71 | 9e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_17340 | OMPADOMAIN | 40 | 1e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 82 | E4F39_18080 | E4F39_18120 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_18080 | 0 | 14 | -0.368751 | type II secretion system protein GspD | |
| E4F39_18085 | 0 | 21 | -1.134395 | type II secretion system protein GspE | |
| E4F39_18090 | 0 | 22 | -2.011604 | type II secretion system protein GspF | |
| E4F39_18095 | -1 | 16 | -3.107850 | general secretion pathway protein GspC | |
| E4F39_18100 | -2 | 12 | -2.413404 | hypothetical protein | |
| E4F39_18105 | -1 | 12 | -3.260240 | type II secretion system protein GspG | |
| E4F39_18110 | 0 | 15 | -4.804204 | type II secretion system protein GspH | |
| E4F39_18115 | -2 | 11 | -2.015713 | type II secretion system protein GspI | |
| E4F39_18120 | -2 | 10 | -2.034239 | prepilin-type N-terminal cleavage/methylation |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18165 | BCTERIALGSPD | 403 | e-133 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18175 | BCTERIALGSPF | 382 | e-133 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18190 | BCTERIALGSPG | 188 | 6e-65 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18195 | BCTERIALGSPH | 52 | 1e-10 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18200 | BCTERIALGSPG | 30 | 0.001 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18205 | BCTERIALGSPG | 33 | 3e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 83 | E4F39_18185 | E4F39_18210 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_18185 | 1 | 14 | 1.653163 | flagellar motor switch protein FliM | |
| E4F39_18190 | 0 | 10 | 2.797078 | flagellar motor switch protein FliN | |
| E4F39_18195 | 0 | 11 | 3.591327 | flagellar biosynthetic protein FliO | |
| E4F39_18200 | 0 | 12 | 3.275957 | flagellar type III secretion system pore protein | |
| E4F39_18205 | -3 | 10 | 0.864230 | flagellar biosynthesis protein FliQ | |
| E4F39_18210 | -3 | 11 | 1.619598 | flagellar biosynthetic protein FliR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18280 | FLGMOTORFLIM | 276 | 2e-93 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18285 | FLGMOTORFLIN | 134 | 3e-43 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18295 | FLGBIOSNFLIP | 291 | e-102 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18300 | TYPE3IMQPROT | 69 | 4e-19 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18305 | TYPE3IMRPROT | 161 | 7e-51 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| 84 | E4F39_18240 | E4F39_18290 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_18240 | 2 | 14 | 1.120917 | sensor histidine kinase | |
| E4F39_18245 | 2 | 16 | 1.507726 | response regulator | |
| E4F39_18250 | 1 | 13 | 1.023802 | porin | |
| E4F39_18255 | 0 | 12 | 0.438384 | hypothetical protein | |
| E4F39_18265 | 0 | 10 | 0.072672 | site-specific DNA-methyltransferase | |
| E4F39_18275 | 2 | 12 | -1.466486 | restriction endonuclease subunit R | |
| E4F39_18280 | 2 | 12 | -1.086497 | hypothetical protein | |
| E4F39_18290 | -1 | 12 | 1.783810 | porin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18340 | PF06580 | 54 | 3e-10 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18345 | HTHFIS | 96 | 3e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18350 | ECOLNEIPORIN | 64 | 1e-13 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_18375 | ECOLNEIPORIN | 74 | 5e-17 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| 85 | E4F39_18930 | E4F39_18970 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_18930 | -1 | 11 | -1.873050 | nucleoid occlusion factor SlmA | |
| E4F39_18935 | -3 | 13 | -1.534728 | pyrimidine 5'-nucleotidase | |
| E4F39_18945 | -3 | 11 | -0.298223 | acetylglutamate kinase | |
| E4F39_18950 | -3 | 10 | 1.112968 | hypothetical protein | |
| E4F39_18955 | 2 | 15 | 2.674375 | HAMP domain-containing histidine kinase | |
| E4F39_18965 | 0 | 11 | 1.789673 | response regulator transcription factor | |
| E4F39_18970 | -2 | 11 | 1.618956 | ATP-dependent protease ATPase subunit HslU |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19070 | HTHTETR | 57 | 5e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19080 | CARBMTKINASE | 44 | 5e-07 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19100 | HTHFIS | 88 | 9e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19105 | HTHFIS | 31 | 0.016 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 86 | E4F39_19130 | E4F39_19185 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_19130 | -1 | 14 | -0.088442 | flagellar hook-length control protein FliK | |
| E4F39_19135 | 0 | 15 | 0.815372 | flagellar export protein FliJ | |
| E4F39_19140 | -2 | 13 | 0.752895 | flagellar protein export ATPase FliI | |
| E4F39_19145 | -2 | 10 | 0.122788 | flagellar assembly protein FliH | |
| E4F39_19150 | -1 | 11 | -0.313685 | flagellar motor switch protein FliG | |
| E4F39_19155 | -2 | 11 | -1.096679 | flagellar basal body M-ring protein FliF | |
| E4F39_19165 | 0 | 14 | -1.104684 | flagellar hook-basal body complex protein FliE | |
| E4F39_19170 | 0 | 13 | -0.685655 | flagellar export chaperone FliS | |
| E4F39_19175 | 1 | 14 | 0.039248 | flagellar protein FliT | |
| E4F39_19180 | 2 | 12 | 1.250821 | flagellar hook-length control protein FliK | |
| E4F39_19185 | 3 | 12 | 1.272446 | export system protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19240 | FLGHOOKFLIK | 73 | 3e-16 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19245 | FLGFLIJ | 60 | 2e-14 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19255 | FLGFLIH | 108 | 3e-31 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19260 | FLGMOTORFLIG | 298 | e-102 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19265 | FLGMRINGFLIF | 468 | e-162 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19270 | FLGHOOKFLIE | 61 | 9e-16 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19290 | TYPE3IMSPROT | 62 | 4e-15 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 87 | E4F39_19380 | E4F39_19430 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| E4F39_19380 | 2 | 12 | 1.292142 | flagellar basal body rod protein FlgC | |
| E4F39_19385 | 1 | 11 | 1.813598 | flagellar hook assembly protein FlgD | |
| E4F39_19390 | -1 | 10 | 2.467410 | flagellar hook protein FlgE | |
| E4F39_19395 | -1 | 10 | 3.390180 | flagellar basal-body rod protein FlgF | |
| E4F39_19400 | 0 | 11 | 3.451113 | flagellar basal-body rod protein FlgG | |
| E4F39_19405 | -2 | 11 | 3.250986 | flagellar basal body L-ring protein FlgH | |
| E4F39_19410 | -1 | 10 | 3.568488 | flagellar basal body P-ring protein FlgI | |
| E4F39_19415 | -1 | 11 | 1.965309 | flagellar assembly peptidoglycan hydrolase FlgJ | |
| E4F39_19420 | 0 | 11 | 2.519285 | flagellar brake protein | |
| E4F39_19425 | 0 | 10 | 1.932941 | flagellar hook-associated protein FlgK | |
| E4F39_19430 | 1 | 11 | 2.134904 | flagellar hook-associated protein 3 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19500 | FLGHOOKAP1 | 27 | 0.029 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19510 | FLGHOOKAP1 | 34 | 0.001 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19515 | FLGHOOKAP1 | 29 | 0.018 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19520 | FLGHOOKAP1 | 42 | 1e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19525 | FLGLRINGFLGH | 206 | 3e-69 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19530 | FLGPRINGFLGI | 363 | e-127 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19535 | FLGFLGJ | 227 | 4e-75 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19545 | FLGHOOKAP1 | 231 | 4e-70 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| E4F39_19550 | FLAGELLIN | 41 | 6e-06 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||