S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
1 | Spea_0038 | Spea_0080 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0038 | -1 | 18 | -3.187577 | coproporphyrinogen III oxidase | |
Spea_0039 | -1 | 21 | -4.666738 | globin | |
Spea_0040 | -1 | 21 | -4.471587 | shikimate 5-dehydrogenase | |
Spea_0041 | -2 | 19 | -5.544526 | hypothetical protein | |
Spea_0042 | -2 | 17 | -4.885863 | carbonic anhydrase | |
Spea_0043 | -3 | 20 | -5.382847 | hypothetical protein | |
Spea_0044 | -2 | 20 | -3.915565 | hypothetical protein | |
Spea_0045 | -1 | 21 | -3.808931 | hypothetical protein | |
Spea_0046 | -1 | 26 | -4.728541 | polysaccharide biosynthesis protein CapD | |
Spea_0047 | 0 | 29 | -4.600611 | DegT/DnrJ/EryC1/StrS aminotransferase | |
Spea_0048 | 0 | 30 | -5.594732 | UDP-N-acetylglucosamine 2-epimerase | |
Spea_0049 | 0 | 28 | -6.079255 | N-acylneuraminate-9-phosphate synthase | |
Spea_0050 | 1 | 26 | -5.449646 | sialic acid synthase | |
Spea_0051 | 1 | 22 | -4.729683 | nucleotidyl transferase | |
Spea_0052 | 0 | 20 | -3.144528 | acylneuraminate cytidylyltransferase | |
Spea_0053 | 0 | 20 | -2.589986 | hypothetical protein | |
Spea_0054 | 0 | 18 | -0.734581 | hypothetical protein | |
Spea_0055 | 1 | 17 | 0.048263 | OmpA/MotB domain-containing protein | |
Spea_0056 | 2 | 16 | 0.235156 | MotA/TolQ/ExbB proton channel | |
Spea_0057 | 3 | 13 | 0.485653 | flagellar biosynthesis sigma factor | |
Spea_0058 | 3 | 17 | 0.434168 | flagellar basal body-associated protein FliL | |
Spea_0059 | 3 | 16 | 0.612358 | flagellar hook-length control protein | |
Spea_0060 | 3 | 17 | 0.165559 | hypothetical protein | |
Spea_0061 | 1 | 15 | 0.186430 | flagellar protein FliS | |
Spea_0062 | 1 | 14 | 0.248599 | flagellar hook-associated 2 domain-containing | |
Spea_0063 | -1 | 15 | 1.080247 | flagellin domain-containing protein | |
Spea_0064 | -1 | 16 | 1.519415 | hypothetical protein | |
Spea_0065 | -1 | 17 | 2.258060 | flagellar hook-associated protein 3 | |
Spea_0066 | -1 | 16 | 3.198643 | flagellar hook-associated protein FlgK | |
Spea_0067 | 0 | 19 | 4.061465 | peptidoglycan hydrolase | |
Spea_0068 | 1 | 19 | 3.946305 | flagellar basal body P-ring protein | |
Spea_0069 | 0 | 20 | 3.792177 | flagellar basal body L-ring protein | |
Spea_0070 | -1 | 18 | 3.705652 | flagellar basal-body rod protein FlgG | |
Spea_0071 | -1 | 16 | 3.279088 | flagellar basal-body rod protein FlgF | |
Spea_0072 | 0 | 15 | 2.115665 | flagellar hook protein FlgE | |
Spea_0073 | -1 | 14 | 1.494571 | flagellar hook capping protein | |
Spea_0074 | 1 | 17 | 1.239886 | flagellar basal-body rod protein FlgC | |
Spea_0075 | 0 | 18 | 2.567186 | flagellar basal body rod protein FlgB | |
Spea_0076 | 0 | 16 | 2.976742 | SAF domain-containing protein | |
Spea_0077 | 0 | 15 | 3.228835 | hypothetical protein | |
Spea_0078 | -1 | 14 | 3.262920 | hypothetical protein | |
Spea_0079 | -2 | 15 | 3.276855 | hypothetical protein | |
Spea_0080 | -2 | 15 | 3.369808 | FliI/YscN family ATPase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0040 | BCTERIALGSPF | 31 | 0.003 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0046 | NUCEPIMERASE | 38 | 4e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0059 | FLGHOOKFLIK | 39 | 2e-05 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0063 | FLAGELLIN | 107 | 2e-28 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0064 | FbpA_PF05833 | 37 | 1e-04 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0065 | FLAGELLIN | 49 | 2e-08 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0066 | FLGHOOKAP1 | 167 | 2e-48 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0067 | FLGFLGJ | 49 | 1e-09 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0068 | FLGPRINGFLGI | 343 | e-119 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0069 | FLGLRINGFLGH | 144 | 5e-45 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0070 | FLGHOOKAP1 | 41 | 2e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0072 | FLGHOOKAP1 | 34 | 0.001 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0074 | FLGHOOKAP1 | 33 | 4e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0077 | 2FE2SRDCTASE | 26 | 0.024 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. |
2 | Spea_0267 | Spea_0296 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0267 | 2 | 20 | 0.425294 | glutathione-dependent formaldehyde-activating | |
Spea_0268 | 3 | 16 | -0.410608 | hypothetical protein | |
Spea_0269 | 3 | 16 | -0.777140 | S-(hydroxymethyl)glutathione dehydrogenase | |
Spea_0270 | 3 | 14 | -1.320903 | S-formylglutathione hydrolase | |
Spea_0271 | 1 | 18 | -1.476030 | small multidrug resistance protein | |
Spea_0272 | 1 | 18 | -0.824311 | hypothetical protein | |
Spea_0273 | 1 | 19 | -0.877472 | hypothetical protein | |
Spea_0274 | 2 | 15 | 0.629253 | hypothetical protein | |
Spea_0275 | 2 | 15 | 0.875657 | hypothetical protein | |
Spea_0276 | 2 | 14 | 0.895567 | hypothetical protein | |
Spea_0277 | 2 | 16 | 1.327389 | hypothetical protein | |
Spea_0278 | 1 | 16 | 1.571855 | hypothetical protein | |
Spea_0279 | -1 | 16 | 2.563587 | hypothetical protein | |
Spea_0280 | 0 | 21 | 2.034936 | hypothetical protein | |
Spea_0281 | -1 | 18 | -0.614458 | lipid A biosynthesis lauroyl (or palmitoleoyl) | |
Spea_0282 | 0 | 17 | -0.841347 | hypothetical protein | |
Spea_0283 | 0 | 16 | -1.168389 | hypothetical protein | |
Spea_0284 | 0 | 16 | -1.675909 | peptidase S9 prolyl oligopeptidase | |
Spea_0285 | 1 | 18 | -3.602723 | hypothetical protein | |
Spea_0286 | 0 | 20 | -3.794916 | histidine kinase | |
Spea_0287 | 0 | 18 | -2.579058 | hypothetical protein | |
Spea_0288 | 0 | 17 | -1.778625 | hypothetical protein | |
Spea_0289 | 2 | 21 | -0.900449 | hypothetical protein | |
Spea_0290 | 0 | 20 | -0.472657 | hypothetical protein | |
Spea_0291 | 0 | 21 | -0.052416 | hypothetical protein | |
Spea_0292 | 0 | 20 | -0.113223 | hypothetical protein | |
Spea_0293 | 0 | 18 | -0.206751 | hypothetical protein | |
Spea_0294 | 1 | 19 | -0.422354 | hypothetical protein | |
Spea_0295 | 1 | 19 | -0.903690 | hypothetical protein | |
Spea_0296 | 2 | 19 | -1.220970 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0280 | ACRIFLAVINRP | 27 | 0.022 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0286 | HTHFIS | 64 | 1e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0294 | IGASERPTASE | 33 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
3 | Spea_0342 | Spea_0350 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0342 | 0 | 16 | 3.661677 | LysR family transcriptional regulator | |
Spea_0343 | 0 | 17 | 4.649369 | DNA-binding transcriptional regulator IlvY | |
Spea_0344 | 0 | 18 | 4.476291 | ketol-acid reductoisomerase | |
Spea_0345 | 0 | 16 | 4.868129 | acetolactate synthase 2 catalytic subunit | |
Spea_0346 | -1 | 18 | 4.899052 | amino acid-binding ACT domain-containing | |
Spea_0347 | -1 | 19 | 4.697097 | branched-chain amino acid aminotransferase | |
Spea_0348 | -1 | 20 | 4.605575 | dihydroxy-acid dehydratase | |
Spea_0349 | -1 | 20 | 4.126002 | threonine dehydratase | |
Spea_0350 | 0 | 19 | 3.404899 | serine--pyruvate transaminase |
4 | Spea_0363 | Spea_0381 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0363 | 4 | 19 | 0.285984 | hypothetical protein | |
Spea_0364 | 4 | 18 | 0.459133 | OmpA/MotB domain-containing protein | |
Spea_0365 | 4 | 18 | 0.440214 | TolC family type I secretion outer membrane | |
Spea_0366 | 3 | 18 | 0.345379 | HlyD family type I secretion membrane fusion | |
Spea_0367 | 3 | 18 | 0.352072 | ABC transporter-like protein | |
Spea_0368 | 4 | 20 | 0.275105 | cadherin | |
Spea_0369 | 0 | 10 | 0.558476 | outer membrane adhesin-like protein | |
Spea_0370 | 3 | 11 | 0.340004 | HemY domain-containing protein | |
Spea_0371 | 2 | 11 | 0.516917 | hypothetical protein | |
Spea_0372 | 1 | 14 | 1.359561 | uroporphyrinogen III synthase HEM4 | |
Spea_0373 | 1 | 16 | 1.804625 | porphobilinogen deaminase | |
Spea_0374 | 2 | 22 | 1.532364 | adenylate cyclase | |
Spea_0375 | 2 | 21 | 2.060664 | frataxin family protein | |
Spea_0376 | 2 | 22 | 2.304795 | hypothetical protein | |
Spea_0377 | 2 | 20 | 1.748359 | diaminopimelate decarboxylase | |
Spea_0378 | 2 | 19 | 0.950354 | diaminopimelate epimerase | |
Spea_0379 | 2 | 16 | 0.133183 | hypothetical protein | |
Spea_0380 | 1 | 14 | 0.924597 | tyrosine recombinase XerC | |
Spea_0381 | 2 | 12 | 1.457294 | HAD family hydrolase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0364 | OMPADOMAIN | 76 | 1e-18 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0366 | RTXTOXIND | 299 | 4e-99 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0368 | CABNDNGRPT | 67 | 1e-12 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0369 | CABNDNGRPT | 80 | 3e-17 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0371 | RTXTOXIND | 31 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0375 | MALTOSEBP | 29 | 0.003 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0378 | IGASERPTASE | 30 | 0.011 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
5 | Spea_0398 | Spea_0406 | Y ![]() | N | Y | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0398 | 0 | 20 | -3.062214 | thioredoxin | |
Spea_0399 | 1 | 22 | -2.955482 | ATP-dependent RNA helicase RhlB | |
Spea_0400 | 2 | 24 | -3.496509 | Ppx/GppA phosphatase | |
Spea_0401 | 1 | 25 | -3.643725 | TonB-dependent receptor | |
Spea_0402 | 0 | 21 | -3.755732 | transposase | |
Spea_0403 | 0 | 21 | -3.760757 | integrase catalytic subunit | |
Spea_0404 | 0 | 22 | -3.305041 | TonB-dependent receptor | |
Spea_0405 | 1 | 24 | -4.063843 | hypothetical protein | |
Spea_0406 | 2 | 21 | -2.793236 | transposase IS116/IS110/IS902 family protein |
6 | Spea_0429 | Spea_0451 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0429 | 2 | 19 | 2.471906 | short chain dehydrogenase | |
Spea_0430 | 2 | 19 | 2.380939 | hypothetical protein | |
Spea_0431 | 2 | 18 | 2.207828 | phosphoribosylamine--glycine ligase | |
Spea_0432 | 3 | 17 | 2.033541 | bifunctional | |
Spea_0433 | 2 | 18 | 1.705325 | zinc-responsive transcriptional regulator | |
Spea_0434 | 2 | 20 | 2.122167 | permease | |
Spea_0435 | 3 | 23 | 1.807907 | DSBA oxidoreductase | |
Spea_0436 | 3 | 24 | 2.543154 | putative thiol-disulfide oxidoreductase DCC | |
Spea_0437 | 2 | 21 | 3.166849 | molybdopterin oxidoreductase Fe4S4 region | |
Spea_0438 | 2 | 19 | 3.104385 | formate dehydrogenase subunit alpha | |
Spea_0439 | 3 | 16 | 2.521930 | formate dehydrogenase subunit beta | |
Spea_0440 | 3 | 18 | 2.410085 | formate dehydrogenase subunit gamma | |
Spea_0441 | 3 | 18 | 2.341220 | formate dehydrogenase accessory protein FdhE | |
Spea_0442 | 3 | 15 | 1.645631 | selenocysteine synthase | |
Spea_0443 | 2 | 14 | 0.801981 | selenocysteine-specific translation elongation | |
Spea_0444 | 2 | 13 | -0.170631 | *formate dehydrogenase accessory protein | |
Spea_0445 | 0 | 12 | 1.626682 | putative inner membrane protein | |
Spea_0446 | 0 | 14 | 1.101107 | hypothetical protein | |
Spea_0447 | -1 | 14 | 1.013050 | hypothetical protein | |
Spea_0448 | 1 | 14 | 1.257984 | LysR family transcriptional regulator | |
Spea_0449 | 2 | 12 | 1.410124 | hypothetical protein | |
Spea_0450 | 2 | 12 | 1.297802 | hypothetical protein | |
Spea_0451 | 2 | 14 | 0.519530 | N-acetyltransferase GCN5 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0429 | DHBDHDRGNASE | 70 | 2e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0443 | TCRTETOQM | 57 | 1e-10 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0446 | PF01206 | 92 | 1e-28 | SirA family protein | |
>PF01206#SirA family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0451 | AUTOINDCRSYN | 32 | 8e-04 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. |
7 | Spea_0479 | Spea_0503 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0479 | 3 | 26 | -0.518573 | cytochrome c | |
Spea_0480 | 2 | 18 | -0.332445 | rhodanese domain-containing protein | |
Spea_0481 | 0 | 15 | 0.862844 | FKBP-type peptidylprolyl isomerase | |
Spea_0482 | -2 | 16 | 1.419404 | hypothetical protein | |
Spea_0483 | -1 | 18 | 2.117962 | 4Fe-4S ferredoxin | |
Spea_0484 | -2 | 16 | 1.208594 | polysulfide reductase NrfD | |
Spea_0485 | -2 | 16 | 0.568660 | NosL family protein | |
Spea_0486 | -2 | 15 | -0.101257 | periplasmic copper-binding protein | |
Spea_0487 | -2 | 16 | -1.093832 | ABC transporter-like protein | |
Spea_0488 | -1 | 18 | -3.990451 | copper ABC transporter permease | |
Spea_0489 | 0 | 21 | -4.914502 | transcriptional regulator CadC | |
Spea_0490 | 3 | 31 | -6.776919 | hypothetical protein | |
Spea_0491 | 3 | 29 | -6.466674 | hypothetical protein | |
Spea_0492 | 1 | 27 | -5.173242 | hypothetical protein | |
Spea_0493 | -1 | 20 | -1.470073 | lysine exporter protein LysE/YggA | |
Spea_0494 | -1 | 17 | -0.458190 | hypothetical protein | |
Spea_0495 | -1 | 17 | -0.344610 | hypothetical protein | |
Spea_0496 | 0 | 17 | -0.477140 | hypothetical protein | |
Spea_0497 | 0 | 16 | -0.338162 | hypothetical protein | |
Spea_0498 | 3 | 14 | 0.192595 | hypothetical protein | |
Spea_0499 | 3 | 20 | -1.462082 | hypothetical protein | |
Spea_0500 | 3 | 18 | -1.402104 | ferredoxin | |
Spea_0501 | 2 | 18 | -2.034209 | RNA polymerase sigma factor SigZ | |
Spea_0502 | 2 | 19 | -1.561188 | glutathione S-transferase domain-containing | |
Spea_0503 | 2 | 20 | -1.142052 | cytochrome c |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0481 | INFPOTNTIATR | 153 | 3e-48 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0490 | PF06340 | 26 | 0.044 | Vibrio cholerae toxin co-regulated pilus biosynthesis pr... | |
>PF06340#Vibrio cholerae toxin co-regulated pilus biosynthesis | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0491 | FbpA_PF05833 | 26 | 0.019 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0497 | VACCYTOTOXIN | 29 | 0.049 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. |
8 | Spea_0532 | Spea_0543 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0532 | -2 | 23 | 3.593352 | short-chain dehydrogenase/reductase SDR | |
Spea_0533 | 1 | 22 | 2.898406 | acetyl-CoA carboxylase, biotin carboxyl carrier | |
Spea_0534 | 2 | 18 | 3.191302 | 3-dehydroquinate dehydratase | |
Spea_0535 | 1 | 16 | 3.715643 | peptidyl-tRNA hydrolase domain-containing | |
Spea_0536 | 1 | 21 | 4.824111 | hypothetical protein | |
Spea_0537 | 0 | 19 | 4.567406 | hypothetical protein | |
Spea_0538 | 0 | 19 | 4.580482 | hypothetical protein | |
Spea_0539 | 0 | 18 | 4.352623 | outer membrane efflux family protein | |
Spea_0540 | -1 | 18 | 3.953022 | RND family efflux transporter MFP subunit | |
Spea_0541 | 0 | 18 | 3.303295 | CzcA family heavy metal efflux protein | |
Spea_0542 | 2 | 15 | 1.340386 | hypothetical protein | |
Spea_0543 | 2 | 15 | 1.485884 | penicillin-insensitive murein endopeptidase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0532 | DHBDHDRGNASE | 57 | 7e-12 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0533 | RTXTOXIND | 27 | 0.031 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0540 | RTXTOXIND | 50 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0541 | ACRIFLAVINRP | 654 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
9 | Spea_0621 | Spea_0626 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0621 | -2 | 17 | 3.561755 | quinol dehydrogenase membrane component | |
Spea_0622 | -2 | 18 | 3.515047 | quinol dehydrogenase periplasmic component | |
Spea_0623 | 0 | 18 | 3.349901 | nitrate reductase catalytic subunit | |
Spea_0624 | 2 | 25 | 3.467772 | NapD family protein | |
Spea_0625 | 1 | 24 | 3.508092 | hypothetical protein | |
Spea_0626 | 1 | 21 | 3.460800 | hypothetical protein |
10 | Spea_0645 | Spea_0651 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0645 | -3 | 16 | 3.635327 | lipid A biosynthesis lauroyl (or palmitoleoyl) | |
Spea_0646 | -2 | 17 | 3.775557 | bifunctional heptose 7-phosphate kinase/heptose | |
Spea_0647 | -2 | 17 | 3.219483 | hypothetical protein | |
Spea_0648 | -1 | 20 | 3.681645 | TetR family transcriptional regulator | |
Spea_0649 | -1 | 18 | 3.840527 | MltA-interacting MipA family protein | |
Spea_0650 | -1 | 17 | 3.961558 | NAD(P)(+) transhydrogenase | |
Spea_0651 | -2 | 16 | 3.134262 | oxidoreductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0646 | LPSBIOSNTHSS | 31 | 0.008 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0648 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
11 | Spea_0699 | Spea_0704 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0699 | 0 | 14 | 3.166281 | sugar fermentation stimulation protein A | |
Spea_0700 | -1 | 16 | 3.959578 | aminopeptidase B | |
Spea_0701 | 0 | 17 | 3.281337 | transcriptional regulator CadC | |
Spea_0702 | 0 | 17 | 3.956628 | hypothetical protein | |
Spea_0703 | 0 | 18 | 4.231276 | 2'-5' RNA ligase | |
Spea_0704 | 0 | 17 | 4.024160 | ATP-dependent helicase HrpB |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0701 | HTHFIS | 39 | 2e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
12 | Spea_0749 | Spea_0754 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0749 | -1 | 18 | 4.524237 | hypothetical protein | |
Spea_0750 | -2 | 20 | 4.351928 | hypothetical protein | |
Spea_0751 | -2 | 18 | 4.233570 | hypothetical protein | |
Spea_0752 | -3 | 19 | 3.945983 | FAD dependent oxidoreductase | |
Spea_0753 | -2 | 17 | 3.293501 | chromate transporter | |
Spea_0754 | -2 | 17 | 3.220644 | formate dehydrogenase subunit alpha |
13 | Spea_0771 | Spea_0796 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0771 | 2 | 25 | -0.350842 | aromatic amino acid permease | |
Spea_0772 | 2 | 21 | 0.135649 | L-serine dehydratase 1 | |
Spea_0773 | 1 | 14 | 0.401269 | N-acetyltransferase GCN5 | |
Spea_0774 | -1 | 15 | 0.385838 | hypothetical protein | |
Spea_0775 | 0 | 15 | -0.002027 | sodium:dicarboxylate symporter | |
Spea_0776 | -1 | 17 | -0.885299 | hypothetical protein | |
Spea_0777 | -1 | 17 | -0.696634 | hypothetical protein | |
Spea_0778 | -1 | 15 | -2.487526 | diguanylate cyclase | |
Spea_0779 | 0 | 16 | -3.943210 | N-acetyltransferase GCN5 | |
Spea_0780 | 1 | 20 | -4.829613 | hypothetical protein | |
Spea_0781 | 0 | 20 | -4.562642 | hypothetical protein | |
Spea_0782 | 0 | 18 | -3.110398 | hypothetical protein | |
Spea_0783 | 1 | 26 | -1.298336 | hypothetical protein | |
Spea_0784 | 2 | 23 | 0.337363 | hypothetical protein | |
Spea_0785 | 2 | 26 | 1.672701 | hypothetical protein | |
Spea_0786 | 3 | 34 | 2.656253 | N-acetyltransferase GCN5 | |
Spea_0787 | 3 | 35 | 2.500221 | S-adenosylmethionine synthetase | |
Spea_0788 | 2 | 28 | 1.472531 | transketolase | |
Spea_0789 | 1 | 18 | 0.383803 | erythrose 4-phosphate dehydrogenase | |
Spea_0790 | 1 | 19 | -0.026658 | phosphoglycerate kinase | |
Spea_0791 | 0 | 12 | -0.616494 | fructose-1,6-bisphosphate aldolase | |
Spea_0792 | -1 | 12 | -1.028204 | hypothetical protein | |
Spea_0793 | 0 | 13 | -1.225884 | putative transcriptional regulator CadC | |
Spea_0794 | 1 | 15 | -0.516521 | hypothetical protein | |
Spea_0795 | 2 | 17 | 0.922195 | hypothetical protein | |
Spea_0796 | 2 | 18 | 1.223440 | putative diguanylate cyclase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0781 | PHPHTRNFRASE | 31 | 0.004 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0786 | SACTRNSFRASE | 29 | 0.005 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
14 | Spea_1082 | Spea_1091 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1082 | 2 | 17 | -0.792291 | riboflavin biosynthesis protein RibF | |
Spea_1083 | 2 | 16 | -0.764390 | isoleucyl-tRNA synthetase | |
Spea_1084 | -1 | 17 | -1.332396 | lipoprotein signal peptidase | |
Spea_1085 | 1 | 21 | -1.887816 | FKBP-type peptidylprolyl isomerase | |
Spea_1086 | 2 | 23 | -2.378630 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |
Spea_1087 | 2 | 26 | -3.265758 | type IV pilus modification protein PilV | |
Spea_1088 | 2 | 26 | -3.537136 | type IV pilus assembly protein PilW | |
Spea_1089 | 3 | 24 | -3.446289 | type IV pilus assembly protein PilX | |
Spea_1090 | 3 | 23 | -3.609176 | type IV pilin biogenesis protein | |
Spea_1091 | 0 | 24 | -4.385602 | methylation site containing protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1082 | LPSBIOSNTHSS | 32 | 0.002 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1087 | PilS_PF08805 | 28 | 0.027 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1091 | BCTERIALGSPG | 45 | 7e-09 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G |
15 | Spea_1160 | Spea_1171 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1160 | 2 | 17 | 2.490937 | serine hydroxymethyltransferase | |
Spea_1161 | 2 | 16 | 2.639495 | transcriptional regulator NrdR | |
Spea_1162 | 0 | 14 | 2.542078 | riboflavin biosynthesis protein RibD | |
Spea_1163 | -1 | 16 | 1.777604 | riboflavin synthase subunit alpha | |
Spea_1164 | -1 | 13 | 1.913926 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | |
Spea_1165 | 0 | 12 | 0.587732 | 6,7-dimethyl-8-ribityllumazine synthase | |
Spea_1166 | 0 | 14 | -2.853119 | transcription antitermination protein NusB | |
Spea_1167 | 0 | 14 | -3.037814 | thiamine-monophosphate kinase | |
Spea_1168 | -1 | 15 | -3.872056 | phosphatidylglycerophosphatase A | |
Spea_1169 | -1 | 17 | -4.346302 | recombination and repair protein | |
Spea_1170 | -1 | 25 | -5.890252 | transposase IS116/IS110/IS902 family protein | |
Spea_1171 | 0 | 18 | -5.290196 | putative transcriptional regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1169 | RTXTOXIND | 33 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
16 | Spea_1239 | Spea_1278 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1239 | 2 | 16 | -2.790338 | extracellular solute-binding protein | |
Spea_1240 | 2 | 19 | -2.470552 | hypothetical protein | |
Spea_1241 | 2 | 19 | -2.034074 | hypothetical protein | |
Spea_1242 | 1 | 20 | -2.657345 | hypothetical protein | |
Spea_1243 | 0 | 17 | -2.153938 | diguanylate phosphodiesterase | |
Spea_1244 | 0 | 19 | -1.412850 | hypothetical protein | |
Spea_1245 | 0 | 19 | -1.493736 | nitroreductase A | |
Spea_1246 | -1 | 20 | -3.090050 | PEBP family protein | |
Spea_1247 | 0 | 24 | -5.534795 | AraC family transcriptional regulator | |
Spea_1248 | 1 | 29 | -8.077424 | alkylphosphonate utilization operon protein | |
Spea_1249 | 2 | 29 | -8.322176 | AraC family transcriptional regulator | |
Spea_1250 | 3 | 27 | -8.799244 | alkylhydroperoxidase | |
Spea_1251 | 3 | 25 | -8.603154 | hypothetical protein | |
Spea_1252 | 2 | 22 | -7.645247 | hypothetical protein | |
Spea_1253 | 1 | 21 | -6.068852 | hypothetical protein | |
Spea_1254 | -1 | 18 | -2.720623 | transposase | |
Spea_1255 | -1 | 20 | -1.455407 | integrase family protein | |
Spea_1256 | 0 | 21 | -0.099671 | hypothetical protein | |
Spea_1257 | 1 | 19 | -1.933405 | hypothetical protein | |
Spea_1258 | 2 | 21 | -2.926298 | hypothetical protein | |
Spea_1259 | 2 | 21 | -3.357509 | DNA repair protein RadC | |
Spea_1260 | 3 | 18 | -4.167730 | phage transcriptional regulator AlpA | |
Spea_1261 | 3 | 17 | -3.629383 | hypothetical protein | |
Spea_1262 | 2 | 16 | -3.961238 | hypothetical protein | |
Spea_1263 | 3 | 15 | -3.622072 | hypothetical protein | |
Spea_1264 | 3 | 17 | -3.985744 | hypothetical protein | |
Spea_1265 | 3 | 18 | -3.929261 | hypothetical protein | |
Spea_1266 | 2 | 19 | -2.604644 | hypothetical protein | |
Spea_1267 | 2 | 20 | -2.328811 | hypothetical protein | |
Spea_1268 | 2 | 19 | -1.365448 | hypothetical protein | |
Spea_1269 | 2 | 21 | -1.056063 | helicase domain-containing protein | |
Spea_1270 | 2 | 21 | -0.294995 | DNA-cytosine methyltransferase | |
Spea_1271 | 2 | 21 | -0.507435 | helicase domain-containing protein | |
Spea_1272 | 2 | 21 | -0.943489 | hypothetical protein | |
Spea_1273 | 2 | 21 | -1.284269 | helicase domain-containing protein | |
Spea_1274 | 4 | 26 | -3.792127 | hypothetical protein | |
Spea_1275 | 3 | 27 | -6.028370 | hypothetical protein | |
Spea_1276 | 2 | 24 | -5.057814 | hypothetical protein | |
Spea_1277 | 2 | 24 | -4.297617 | hypothetical protein | |
Spea_1278 | 2 | 21 | -3.492108 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1265 | IGASERPTASE | 45 | 1e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
17 | Spea_1304 | Spea_1313 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1304 | 2 | 18 | 1.474529 | hypothetical protein | |
Spea_1305 | 3 | 18 | 0.427907 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |
Spea_1306 | 2 | 16 | -0.700132 | histidyl-tRNA synthetase | |
Spea_1307 | 1 | 13 | 0.046942 | hypothetical protein | |
Spea_1308 | 2 | 15 | 0.400671 | outer membrane protein assembly complex subunit | |
Spea_1309 | 1 | 18 | 0.482752 | GTP-binding protein EngA | |
Spea_1310 | 1 | 15 | 0.117020 | hypothetical protein | |
Spea_1311 | 0 | 12 | 1.321339 | hypothetical protein | |
Spea_1312 | 1 | 17 | 3.004651 | exodeoxyribonuclease VII large subunit | |
Spea_1313 | 2 | 21 | 2.307099 | inosine 5'-monophosphate dehydrogenase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1309 | TCRTETOQM | 29 | 0.041 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
18 | Spea_1360 | Spea_1369 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1360 | -1 | 13 | 3.004278 | flagellar hook-basal body complex subunit FliE | |
Spea_1361 | 2 | 11 | 2.951209 | flagellar MS-ring protein | |
Spea_1362 | 2 | 15 | 2.955495 | flagellar motor switch protein G | |
Spea_1363 | 1 | 14 | 3.028097 | flagellar assembly protein FliH | |
Spea_1364 | 0 | 14 | 2.777203 | flagellum-specific ATP synthase | |
Spea_1365 | 1 | 16 | 1.431887 | flagellar export protein FliJ | |
Spea_1366 | 1 | 13 | 0.605451 | flagellar hook-length control protein | |
Spea_1367 | 1 | 15 | -0.018359 | flagellar basal body-associated protein FliL | |
Spea_1368 | 2 | 17 | 0.401269 | flagellar motor switch protein FliM | |
Spea_1369 | 2 | 19 | 0.955743 | flagellar motor switch protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1360 | FLGHOOKFLIE | 54 | 7e-13 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1361 | FLGMRINGFLIF | 301 | 3e-97 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1362 | FLGMOTORFLIG | 287 | 1e-97 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1363 | FLGFLIH | 77 | 1e-18 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1365 | FLGFLIJ | 41 | 3e-07 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1366 | FLGHOOKFLIK | 48 | 5e-08 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1368 | FLGMOTORFLIM | 249 | 5e-83 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1369 | FLGMOTORFLIN | 113 | 2e-35 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. |
19 | Spea_1394 | Spea_1414 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1394 | -2 | 20 | -3.540366 | transcriptional acivator RfaH | |
Spea_1395 | -2 | 22 | -4.249523 | polysaccharide export protein | |
Spea_1396 | 0 | 31 | -7.463373 | hypothetical protein | |
Spea_1397 | 1 | 34 | -9.066545 | lipopolysaccharide biosynthesis protein | |
Spea_1398 | 2 | 38 | -10.576740 | dTDP-glucose-4,6-dehydratase | |
Spea_1399 | 3 | 42 | -11.301017 | glucose-1-phosphate thymidylyltransferase | |
Spea_1400 | 3 | 43 | -11.445095 | WxcM domain-containing protein | |
Spea_1401 | 2 | 40 | -11.165059 | N-acetyltransferase GCN5 | |
Spea_1402 | 2 | 39 | -11.284788 | hypothetical protein | |
Spea_1403 | 3 | 38 | -10.797407 | DegT/DnrJ/EryC1/StrS aminotransferase | |
Spea_1404 | 3 | 39 | -11.092971 | hypothetical protein | |
Spea_1405 | 4 | 38 | -11.889153 | peptidase C26 | |
Spea_1406 | 4 | 38 | -12.280054 | nucleotidyl transferase | |
Spea_1407 | 4 | 41 | -12.486270 | CDP-glycerol:poly(glycerophosphate) | |
Spea_1408 | 3 | 42 | -11.494292 | polysaccharide biosynthesis protein | |
Spea_1409 | 4 | 44 | -11.657215 | group 1 glycosyl transferase | |
Spea_1410 | 0 | 36 | -8.554151 | hypothetical protein | |
Spea_1411 | -1 | 28 | -6.209606 | glycosyl transferase family protein | |
Spea_1412 | -1 | 23 | -5.081259 | glycosyl transferase family protein | |
Spea_1413 | -1 | 20 | -4.239040 | DegT/DnrJ/EryC1/StrS aminotransferase | |
Spea_1414 | -1 | 16 | -3.159679 | sugar transferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1396 | NUCEPIMERASE | 28 | 0.008 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1398 | NUCEPIMERASE | 179 | 1e-55 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1404 | PHPHTRNFRASE | 39 | 9e-05 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase |
20 | Spea_1486 | Spea_1526 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1486 | 2 | 15 | -0.593055 | serine O-acetyltransferase | |
Spea_1487 | 0 | 14 | 0.250584 | BadM/Rrf2 family transcriptional regulator | |
Spea_1488 | 1 | 15 | 0.205787 | cysteine desulfurase | |
Spea_1489 | 1 | 13 | -0.140745 | scaffold protein | |
Spea_1490 | 1 | 15 | -1.002027 | iron-sulfur cluster assembly protein IscA | |
Spea_1491 | 1 | 16 | -1.165503 | co-chaperone HscB | |
Spea_1492 | 0 | 16 | -1.047492 | chaperone protein HscA | |
Spea_1493 | 1 | 21 | -3.710181 | ferredoxin, 2Fe-2S type, ISC system | |
Spea_1494 | 4 | 26 | -3.142911 | transposase | |
Spea_1495 | 4 | 26 | -2.905855 | integrase catalytic subunit | |
Spea_1496 | 3 | 23 | -1.376100 | hypothetical protein | |
Spea_1497 | 2 | 23 | -0.753700 | hypothetical protein | |
Spea_1498 | 2 | 20 | -1.098528 | nucleoside diphosphate kinase | |
Spea_1499 | 1 | 15 | -1.649909 | TonB-dependent receptor | |
Spea_1500 | -1 | 15 | -1.300286 | TraR/DksA family transcriptional regulator | |
Spea_1501 | 0 | 16 | -1.706118 | dihydrouridine synthase | |
Spea_1502 | 1 | 18 | -3.385221 | hypothetical protein | |
Spea_1503 | 2 | 14 | -0.992420 | hypothetical protein | |
Spea_1504 | 4 | 14 | -0.399092 | hypothetical protein | |
Spea_1505 | 3 | 14 | -0.372099 | hypothetical protein | |
Spea_1506 | 3 | 13 | -0.516987 | hypothetical protein | |
Spea_1507 | 3 | 12 | -0.304947 | adenine phosphoribosyltransferase | |
Spea_1508 | -1 | 14 | -0.972443 | DNA polymerase III subunits gamma and tau | |
Spea_1509 | -1 | 17 | -2.468528 | hypothetical protein | |
Spea_1510 | 0 | 18 | -2.091782 | acetyltransferase | |
Spea_1511 | -1 | 17 | -1.887165 | Sel1 domain-containing protein | |
Spea_1512 | -1 | 18 | -2.028552 | hypothetical protein | |
Spea_1513 | 0 | 18 | -2.028830 | TonB-dependent receptor | |
Spea_1514 | 2 | 19 | -1.443038 | kelch repeat-containing protein | |
Spea_1515 | 2 | 19 | -1.329499 | exo-alpha-sialidase | |
Spea_1516 | 3 | 19 | -1.866928 | putative hydrolase | |
Spea_1517 | 3 | 21 | -1.774902 | transcriptional regulator NanR | |
Spea_1518 | 3 | 20 | -1.577807 | SSS family solute/sodium (Na+) symporter | |
Spea_1519 | 3 | 22 | -2.029996 | N-acetylmannosamine-6-phosphate 2-epimerase | |
Spea_1520 | 2 | 21 | -1.821182 | ROK family protein | |
Spea_1521 | -1 | 14 | -1.433732 | glucosamine-6-phosphate isomerase | |
Spea_1522 | 0 | 12 | -1.115374 | dihydrodipicolinate synthetase | |
Spea_1523 | 0 | 13 | -0.871955 | N-acetylglucosamine-6-phosphate deacetylase | |
Spea_1524 | 0 | 15 | -0.204450 | hypothetical protein | |
Spea_1525 | 2 | 18 | 0.423047 | recombination protein RecR | |
Spea_1526 | 2 | 18 | -0.212915 | heat shock protein 90 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1488 | PF07328 | 28 | 0.024 | T-DNA border endonuclease VirD1 | |
>PF07328#T-DNA border endonuclease VirD1 | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1492 | SHAPEPROTEIN | 111 | 9e-29 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
21 | Spea_1664 | Spea_1669 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1664 | 2 | 26 | -1.330601 | D-erythro-7,8-dihydroneopterin triphosphate | |
Spea_1665 | 2 | 27 | -1.092402 | hypothetical protein | |
Spea_1666 | 2 | 28 | -1.057434 | hypothetical protein | |
Spea_1667 | 5 | 40 | -0.539067 | hypothetical protein | |
Spea_1668 | 4 | 41 | -0.197502 | phosphate acetyltransferase | |
Spea_1669 | 3 | 31 | -0.260584 | acetate kinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1669 | ACETATEKNASE | 502 | e-180 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. |
22 | Spea_1782 | Spea_1787 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1782 | 3 | 26 | 0.558197 | citrate synthase I | |
Spea_1783 | 3 | 21 | 1.065155 | type II citrate synthase | |
Spea_1784 | 3 | 22 | 1.265968 | succinate dehydrogenase cytochrome b556 subunit | |
Spea_1785 | 3 | 24 | 1.152449 | succinate dehydrogenase hydrophobic membrane | |
Spea_1786 | 3 | 27 | 1.149534 | succinate dehydrogenase flavoprotein subunit | |
Spea_1787 | 3 | 26 | 0.574488 | succinate dehydrogenase iron-sulfur subunit |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1785 | TYPE3OMOPROT | 28 | 0.009 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein |
23 | Spea_1864 | Spea_1912 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1864 | 2 | 14 | -0.019110 | gamma-glutamyltransferase | |
Spea_1865 | 0 | 20 | -4.083439 | hypothetical protein | |
Spea_1866 | 0 | 25 | -6.549041 | hypothetical protein | |
Spea_1867 | 3 | 27 | -8.535443 | hypothetical protein | |
Spea_1868 | 3 | 23 | -7.835349 | hypothetical protein | |
Spea_1869 | 2 | 19 | -6.468086 | lysine exporter protein LysE/YggA | |
Spea_1870 | 2 | 20 | -6.297566 | hypothetical protein | |
Spea_1871 | 1 | 18 | -5.748322 | hypothetical protein | |
Spea_1872 | 0 | 13 | -3.594955 | hypothetical protein | |
Spea_1873 | -2 | 15 | -0.496509 | 4-hydroxyphenylpyruvate dioxygenase | |
Spea_1874 | -1 | 15 | -0.212594 | homogentisate 12-dioxygenase | |
Spea_1875 | 1 | 18 | -0.915536 | LysR family transcriptional regulator | |
Spea_1876 | 1 | 17 | -1.235077 | hypothetical protein | |
Spea_1877 | 0 | 14 | -1.239986 | cytochrome-c peroxidase | |
Spea_1878 | 2 | 19 | -1.761918 | integral membrane protein TerC | |
Spea_1879 | 1 | 17 | -2.157094 | ABC transporter | |
Spea_1880 | 0 | 15 | -2.368165 | alpha/beta hydrolase fold protein | |
Spea_1881 | -2 | 14 | -3.333060 | hypothetical protein | |
Spea_1882 | -1 | 20 | -5.353501 | hypothetical protein | |
Spea_1883 | 0 | 24 | -6.665326 | hypothetical protein | |
Spea_1884 | -1 | 26 | -6.750327 | hypothetical protein | |
Spea_1885 | 0 | 27 | -6.503800 | mechanosensitive ion channel protein MscS | |
Spea_1886 | 3 | 28 | -7.706185 | hypothetical protein | |
Spea_1887 | 2 | 29 | -7.699195 | phage exclusion protein Lit | |
Spea_1888 | 3 | 30 | -7.105998 | hypothetical protein | |
Spea_1890 | 2 | 28 | -6.872665 | hypothetical protein | |
Spea_1891 | 3 | 26 | -7.056236 | XRE family transcriptional regulator | |
Spea_1892 | 1 | 19 | -6.249354 | hypothetical protein | |
Spea_1893 | 2 | 19 | -6.222277 | type III restriction protein res subunit | |
Spea_1894 | 2 | 19 | -5.782189 | hypothetical protein | |
Spea_1895 | 1 | 18 | -5.169646 | hypothetical protein | |
Spea_1896 | 1 | 17 | -4.790523 | hypothetical protein | |
Spea_1897 | 0 | 15 | -4.693410 | integrase family protein | |
Spea_1898 | 1 | 13 | -4.464830 | hypothetical protein | |
Spea_1899 | 0 | 12 | -1.990150 | integrase family protein | |
Spea_1900 | -2 | 12 | -0.696759 | mechanosensitive ion channel protein MscS | |
Spea_1901 | -2 | 11 | -0.751442 | response regulator receiver modulated CheW | |
Spea_1902 | -1 | 13 | -0.089043 | hypothetical protein | |
Spea_1903 | 1 | 17 | -0.476683 | hypothetical protein | |
Spea_1904 | 1 | 16 | -0.638155 | lytic murein transglycosylase | |
Spea_1905 | 2 | 18 | -1.461732 | FKBP-type peptidylprolyl isomerase | |
Spea_1906 | 2 | 14 | -0.956033 | hypothetical protein | |
Spea_1907 | 0 | 11 | -0.577093 | carboxylesterase | |
Spea_1908 | -1 | 11 | -0.649915 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | |
Spea_1909 | -1 | 12 | -0.061085 | heat shock protein Hsp20 | |
Spea_1910 | -2 | 13 | -0.178972 | acetolactate synthase small subunit | |
Spea_1911 | -2 | 13 | -0.996175 | acetolactate synthase large subunit | |
Spea_1912 | 2 | 14 | -1.344372 | Bcr/CflA subfamily drug resistance transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1892 | PF05616 | 30 | 0.007 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1896 | FbpA_PF05833 | 31 | 6e-04 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1901 | HTHFIS | 48 | 2e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1912 | TCRTETB | 44 | 6e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
24 | Spea_1930 | Spea_1946 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1930 | -1 | 17 | -3.545079 | paraquat-inducible protein A | |
Spea_1931 | 0 | 17 | -3.796892 | paraquat-inducible protein A | |
Spea_1932 | 0 | 18 | -3.889081 | hypothetical protein | |
Spea_1933 | 0 | 17 | -2.953979 | putative GAF sensor protein | |
Spea_1934 | -1 | 16 | -2.587658 | putative solute/DNA competence effector | |
Spea_1935 | 0 | 16 | -2.792904 | carboxy-terminal protease | |
Spea_1936 | 0 | 14 | -2.632770 | aminopeptidase N | |
Spea_1937 | 0 | 16 | -2.349960 | hypothetical protein | |
Spea_1938 | 0 | 17 | -2.589329 | hypothetical protein | |
Spea_1939 | 0 | 18 | -3.114203 | hypothetical protein | |
Spea_1940 | 0 | 19 | -3.585070 | BNR repeat-containing protein | |
Spea_1941 | 0 | 18 | -3.484194 | hypothetical protein | |
Spea_1942 | 0 | 19 | -3.825861 | NAD-glutamate dehydrogenase | |
Spea_1943 | -1 | 19 | -4.030347 | dihydroorotate dehydrogenase 2 | |
Spea_1944 | 0 | 17 | -3.783034 | hypothetical protein | |
Spea_1945 | 1 | 17 | -3.564105 | cyclophilin type peptidyl-prolyl cis-trans | |
Spea_1946 | 1 | 17 | -3.171494 | ****23S rRNA m(2)G2445 methyltransferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1941 | ACRIFLAVINRP | 70 | 3e-14 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
25 | Spea_2002 | Spea_2019 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2002 | -1 | 16 | -3.371352 | GreA/GreB family elongation factor | |
Spea_2003 | -1 | 18 | -3.906462 | hypothetical protein | |
Spea_2004 | 0 | 19 | -4.469515 | XRE family transcriptional regulator | |
Spea_2005 | 0 | 22 | -6.125757 | malate synthase | |
Spea_2006 | 2 | 23 | -5.958154 | Fmu (Sun) domain-containing protein | |
Spea_2007 | 3 | 26 | -6.814534 | sulfatase | |
Spea_2008 | 4 | 29 | -6.163947 | peptidoglycan-binding domain-containing protein | |
Spea_2009 | 4 | 30 | -5.833126 | transposase and inactivated derivative | |
Spea_2010 | 3 | 30 | -5.384725 | peptidase A24A prepilin type IV | |
Spea_2011 | 4 | 29 | -5.227471 | ATPase AAA | |
Spea_2012 | 3 | 31 | -5.414995 | SAF domain-containing protein | |
Spea_2013 | 2 | 32 | -6.425779 | type II and III secretion system protein | |
Spea_2014 | 3 | 30 | -6.043149 | hypothetical protein | |
Spea_2015 | 2 | 28 | -5.757614 | hypothetical protein | |
Spea_2016 | 3 | 28 | -5.797255 | TadE family protein | |
Spea_2017 | 3 | 28 | -5.360181 | TadE family protein | |
Spea_2018 | 3 | 27 | -5.079133 | Flp pilus assembly protein ATPase CpaE-like | |
Spea_2019 | 2 | 23 | -3.368747 | type II secretion system protein E |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2010 | PREPILNPTASE | 29 | 0.008 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2011 | HTHFIS | 30 | 0.018 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2013 | BCTERIALGSPD | 145 | 1e-39 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2019 | HTHFIS | 29 | 0.043 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
26 | Spea_2045 | Spea_2113 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2045 | -2 | 14 | -3.083594 | hypothetical protein | |
Spea_2046 | -1 | 14 | -2.643913 | deoxyguanosinetriphosphate | |
Spea_2047 | 0 | 15 | -3.159235 | hypothetical protein | |
Spea_2048 | 0 | 16 | -3.115416 | aminotransferase AlaT | |
Spea_2049 | 1 | 17 | -3.023789 | elongation factor P | |
Spea_2050 | 1 | 14 | -3.009713 | hypothetical protein | |
Spea_2051 | -1 | 14 | -1.758908 | flavodoxin FldA | |
Spea_2052 | 0 | 18 | -2.514892 | LexA regulated protein | |
Spea_2053 | -1 | 19 | -2.979367 | hypothetical protein | |
Spea_2054 | -1 | 23 | -3.997382 | alpha/beta hydrolase fold protein | |
Spea_2055 | -2 | 23 | -5.623073 | replication initiation regulator SeqA | |
Spea_2056 | 0 | 25 | -7.740174 | phosphoglucomutase | |
Spea_2057 | 1 | 28 | -9.184238 | hypothetical protein | |
Spea_2058 | 1 | 23 | -8.457746 | hypothetical protein | |
Spea_2059 | 1 | 18 | -6.745460 | hypothetical protein | |
Spea_2060 | 1 | 15 | -5.716313 | hypothetical protein | |
Spea_2061 | -1 | 14 | -4.937673 | hypothetical protein | |
Spea_2062 | 2 | 22 | -1.561614 | ferredoxin | |
Spea_2063 | 2 | 19 | -1.755461 | ribonucleotide-diphosphate reductase subunit | |
Spea_2064 | 1 | 15 | -1.152353 | ribonucleotide-diphosphate reductase subunit | |
Spea_2065 | 0 | 13 | -0.569975 | HAD family hydrolase | |
Spea_2066 | 1 | 14 | -0.981409 | 3-demethylubiquinone-9 3-methyltransferase | |
Spea_2067 | 1 | 15 | -0.906965 | DNA gyrase subunit A | |
Spea_2068 | 0 | 17 | -1.008438 | beta-lactamase | |
Spea_2069 | 1 | 21 | -0.639093 | phosphoserine aminotransferase | |
Spea_2070 | 2 | 25 | -1.106579 | aromatic amino acid aminotransferase | |
Spea_2071 | 2 | 24 | -1.666054 | 3-phosphoshikimate 1-carboxyvinyltransferase | |
Spea_2072 | 3 | 30 | -1.548093 | cytidylate kinase | |
Spea_2073 | 2 | 28 | -1.190913 | 30S ribosomal protein S1 | |
Spea_2074 | 1 | 16 | -1.848388 | integration host factor subunit beta | |
Spea_2075 | 0 | 16 | -3.267698 | hypothetical protein | |
Spea_2076 | 0 | 14 | -2.274798 | hypothetical protein | |
Spea_2077 | -1 | 14 | -2.647891 | orotidine 5'-phosphate decarboxylase | |
Spea_2078 | -1 | 14 | -2.958060 | short chain dehydrogenase | |
Spea_2079 | -1 | 15 | -3.603910 | hypothetical protein | |
Spea_2080 | -1 | 14 | -3.369888 | magnesium and cobalt transport protein CorA | |
Spea_2081 | -1 | 13 | -2.230520 | acyl-CoA dehydrogenase domain-containing | |
Spea_2082 | 1 | 17 | -2.926381 | D-alanyl-D-alanine | |
Spea_2083 | 0 | 16 | -2.246866 | hypothetical protein | |
Spea_2084 | 0 | 14 | -2.041555 | hypothetical protein | |
Spea_2085 | -1 | 14 | -3.293581 | phosphatidylserine synthase | |
Spea_2086 | -2 | 12 | -3.414370 | DTW domain-containing protein | |
Spea_2087 | -3 | 14 | -3.843297 | hypothetical protein | |
Spea_2088 | -3 | 15 | -4.097140 | two component LuxR family transcriptional | |
Spea_2089 | -1 | 15 | -4.311532 | histidine kinase | |
Spea_2090 | 0 | 17 | -5.170504 | ApbE family lipoprotein | |
Spea_2091 | 0 | 16 | -4.461012 | FMN-binding domain-containing protein | |
Spea_2092 | 1 | 19 | -4.166020 | porin | |
Spea_2093 | 3 | 21 | -4.737928 | pseudouridine synthase | |
Spea_2094 | 3 | 16 | -4.325639 | integrase family protein | |
Spea_2095 | 1 | 17 | -4.364281 | hypothetical protein | |
Spea_2096 | 0 | 15 | -3.839954 | hypothetical protein | |
Spea_2097 | 1 | 15 | -3.667464 | hypothetical protein | |
Spea_2098 | 2 | 15 | -4.218265 | putative orphan protein | |
Spea_2099 | 2 | 17 | -3.586232 | putative Zn-dependent aminopeptidase | |
Spea_2100 | 1 | 21 | -3.657554 | short-chain dehydrogenase/reductase SDR | |
Spea_2101 | 3 | 24 | -3.233397 | alpha-L-glutamate ligase | |
Spea_2102 | 3 | 22 | -3.451447 | hypothetical protein | |
Spea_2103 | 3 | 23 | -3.582412 | hypothetical protein | |
Spea_2104 | 2 | 24 | -3.067524 | glyceraldehyde-3-phosphate dehydrogenase | |
Spea_2105 | 2 | 21 | -3.016588 | hypothetical protein | |
Spea_2106 | 2 | 23 | -2.582459 | glyceraldehyde-3-phosphate dehydrogenase | |
Spea_2107 | -1 | 17 | -2.194945 | *******DsrC family protein | |
Spea_2108 | 0 | 17 | -3.060063 | DsrH family protein | |
Spea_2109 | 0 | 18 | -2.170900 | DsrE family protein | |
Spea_2110 | 1 | 15 | -1.815245 | DsrE family protein | |
Spea_2111 | 0 | 15 | -1.294202 | hypothetical protein | |
Spea_2112 | 0 | 16 | -1.084633 | putative DNA-binding transcriptional regulator | |
Spea_2113 | 2 | 17 | -1.103683 | inner membrane transport protein YdhC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2055 | TETREPRESSOR | 27 | 0.039 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2074 | DNABINDINGHU | 114 | 3e-37 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2078 | DHBDHDRGNASE | 106 | 1e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2088 | HTHFIS | 96 | 2e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2092 | ECOLNEIPORIN | 59 | 5e-12 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2094 | PF05272 | 31 | 0.012 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2097 | ECOLNEIPORIN | 26 | 0.035 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2100 | DHBDHDRGNASE | 70 | 2e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2113 | TCRTETB | 60 | 5e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
27 | Spea_2146 | Spea_2171 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2146 | 2 | 18 | 0.321219 | NADH:flavin oxidoreductase | |
Spea_2147 | 1 | 19 | -0.248618 | alpha/beta hydrolase fold protein | |
Spea_2148 | 2 | 17 | 0.053407 | short-chain dehydrogenase/reductase SDR | |
Spea_2149 | 2 | 17 | -0.046531 | hypothetical protein | |
Spea_2150 | 2 | 16 | 0.101924 | long-chain-acyl-CoA synthetase | |
Spea_2151 | 3 | 16 | 0.932856 | nonspecific lipid-transfer protein | |
Spea_2152 | 2 | 17 | 0.413061 | hypothetical protein | |
Spea_2153 | 3 | 17 | 0.961247 | glyoxalase/bleomycin resistance | |
Spea_2154 | 3 | 18 | 1.030173 | coenzyme A transferase | |
Spea_2155 | 3 | 17 | 1.030837 | coenzyme A transferase | |
Spea_2156 | 4 | 20 | 1.277962 | enoyl-CoA hydratase | |
Spea_2157 | 3 | 22 | 1.578373 | 2-nitropropane dioxygenase | |
Spea_2158 | 3 | 21 | 1.930657 | enoyl-CoA hydratase | |
Spea_2159 | 2 | 23 | 0.839542 | acyl-CoA dehydrogenase domain-containing | |
Spea_2160 | 1 | 22 | -0.069609 | acyl-CoA dehydrogenase domain-containing | |
Spea_2161 | 0 | 22 | -0.387971 | acetyl-CoA acetyltransferase | |
Spea_2162 | 2 | 20 | -0.895476 | short chain dehydrogenase | |
Spea_2163 | 1 | 20 | -1.098814 | amidase | |
Spea_2164 | 1 | 20 | -1.939884 | hypothetical protein | |
Spea_2165 | 1 | 19 | -0.260209 | hypothetical protein | |
Spea_2166 | 1 | 18 | 0.341379 | hypothetical protein | |
Spea_2167 | 2 | 18 | 0.447209 | hypothetical protein | |
Spea_2168 | 3 | 20 | 0.424130 | short chain dehydrogenase | |
Spea_2169 | 2 | 20 | -0.289083 | dehydratase | |
Spea_2170 | 3 | 21 | -0.488852 | acetyl-CoA acetyltransferase | |
Spea_2171 | 3 | 21 | -1.338204 | enoyl-CoA hydratase/isomerase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2146 | FERRIBNDNGPP | 31 | 0.015 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2148 | DHBDHDRGNASE | 142 | 1e-43 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2162 | DHBDHDRGNASE | 68 | 1e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2168 | DHBDHDRGNASE | 94 | 4e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
28 | Spea_2195 | Spea_2214 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2195 | -2 | 16 | -3.251774 | DNA-directed DNA polymerase | |
Spea_2196 | -2 | 16 | -4.258931 | peptidase S24/S26 domain-containing protein | |
Spea_2197 | -2 | 16 | -4.890625 | diguanylate cyclase | |
Spea_2198 | -1 | 17 | -2.543482 | AraC family transcriptional regulator | |
Spea_2199 | -2 | 18 | -3.255996 | hypothetical protein | |
Spea_2200 | 0 | 18 | -2.666986 | hypothetical protein | |
Spea_2201 | 1 | 19 | -2.669697 | hypothetical protein | |
Spea_2202 | 2 | 21 | -4.165120 | hypothetical protein | |
Spea_2203 | 1 | 22 | -4.026330 | hypothetical protein | |
Spea_2204 | 1 | 21 | -4.076673 | trimethyllysine dioxygenase | |
Spea_2205 | 0 | 23 | -5.167105 | threonine aldolase | |
Spea_2206 | 0 | 19 | -4.979791 | amino acid permease-associated protein | |
Spea_2207 | -1 | 20 | -5.663517 | hypothetical protein | |
Spea_2208 | -1 | 20 | -4.277773 | N-acetyltransferase GCN5 | |
Spea_2209 | 0 | 18 | -2.868459 | hypothetical protein | |
Spea_2210 | 0 | 17 | -1.987791 | hypothetical protein | |
Spea_2211 | 1 | 18 | -0.625149 | integrase family protein | |
Spea_2212 | 5 | 29 | -0.815248 | hypothetical protein | |
Spea_2213 | 5 | 29 | -1.191817 | hypothetical protein | |
Spea_2214 | 2 | 18 | 0.176928 | cbb3-type cytochrome c oxidase subunit I |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2208 | SACTRNSFRASE | 40 | 2e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
29 | Spea_2257 | Spea_2277 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2257 | 2 | 25 | -2.114162 | peptidase M14 carboxypeptidase A | |
Spea_2258 | 4 | 28 | -2.141883 | thioredoxin reductase | |
Spea_2259 | 5 | 28 | -3.000650 | N-acetyltransferase GCN5 | |
Spea_2260 | 3 | 27 | -1.742536 | 50S ribosomal protein L20 | |
Spea_2261 | 2 | 24 | -1.587077 | 50S ribosomal protein L35 | |
Spea_2262 | 2 | 23 | -1.673760 | translation initiation factor IF-3 | |
Spea_2263 | 0 | 16 | -1.271869 | threonyl-tRNA synthetase | |
Spea_2264 | 1 | 15 | -1.291961 | hypothetical protein | |
Spea_2265 | 2 | 14 | -0.686576 | short-chain dehydrogenase/reductase SDR | |
Spea_2266 | 4 | 14 | -2.848388 | hypothetical protein | |
Spea_2267 | 4 | 14 | -0.888134 | riboflavin synthase subunit alpha | |
Spea_2268 | 3 | 16 | -1.271869 | MATE efflux family protein | |
Spea_2269 | 3 | 18 | -2.234360 | transposase | |
Spea_2270 | 3 | 20 | -3.755102 | PEBP family protein | |
Spea_2271 | 1 | 14 | -2.520792 | hypothetical protein | |
Spea_2272 | 0 | 15 | -2.714105 | pentapeptide repeat-containing protein | |
Spea_2273 | 1 | 16 | -4.741189 | hypothetical protein | |
Spea_2274 | 0 | 14 | -3.933247 | N-acetyltransferase GCN5 | |
Spea_2275 | 1 | 13 | -3.389622 | hypothetical protein | |
Spea_2276 | 0 | 12 | -2.206962 | radical SAM domain-containing protein | |
Spea_2277 | 0 | 16 | -4.010989 | peptidase S15 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2265 | DHBDHDRGNASE | 84 | 1e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2271 | TCRTETB | 37 | 1e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2272 | cloacin | 40 | 2e-05 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2274 | SACTRNSFRASE | 52 | 3e-11 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2276 | SECA | 33 | 0.005 | SecA protein signature. | |
>SECA#SecA protein signature. |
30 | Spea_2301 | Spea_2326 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2301 | 0 | 18 | -4.473600 | hypothetical protein | |
Spea_2302 | 0 | 18 | -3.974675 | hypothetical protein | |
Spea_2303 | 0 | 19 | -3.978724 | hypothetical protein | |
Spea_2304 | -1 | 22 | -6.089577 | hypothetical protein | |
Spea_2305 | -1 | 24 | -5.985912 | hypothetical protein | |
Spea_2306 | -1 | 25 | -6.807611 | hypothetical protein | |
Spea_2307 | 0 | 30 | -7.994181 | SMC domain-containing protein | |
Spea_2308 | 0 | 35 | -8.871407 | hypothetical protein | |
Spea_2309 | 0 | 34 | -8.853861 | sigma-70 region 4 domain-containing protein | |
Spea_2310 | -1 | 19 | -5.679977 | hypothetical protein | |
Spea_2311 | -1 | 18 | -5.746083 | hypothetical protein | |
Spea_2312 | -1 | 16 | -5.630972 | hypothetical protein | |
Spea_2313 | -1 | 14 | -5.130539 | type III restriction protein res subunit | |
Spea_2314 | -2 | 12 | -3.682829 | HNH nuclease | |
Spea_2315 | -2 | 9 | -1.739535 | hypothetical protein | |
Spea_2316 | -1 | 12 | 0.073477 | putative orphan protein | |
Spea_2317 | -1 | 14 | 1.622623 | hypothetical protein | |
Spea_2318 | 0 | 17 | 3.684063 | hypothetical protein | |
Spea_2319 | -1 | 13 | 3.215517 | putative AcnD-accessory protein PrpF | |
Spea_2320 | -1 | 13 | 2.231304 | aconitate hydratase | |
Spea_2321 | -1 | 14 | 0.248339 | 2-methylcitrate synthase/citrate synthase II | |
Spea_2322 | 0 | 16 | -0.338390 | 2-methylisocitrate lyase | |
Spea_2323 | 0 | 14 | -1.128788 | GntR family transcriptional regulator | |
Spea_2324 | 1 | 14 | -1.574734 | N-acetyltransferase GCN5 | |
Spea_2325 | 0 | 16 | -3.318977 | diguanylate cyclase | |
Spea_2326 | -1 | 15 | -3.558829 | sulfatase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2307 | CHANLCOLICIN | 32 | 0.009 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. |
31 | Spea_2370 | Spea_2375 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2370 | -1 | 13 | -3.875605 | hypothetical protein | |
Spea_2371 | -1 | 13 | -3.899044 | gonadoliberin III-like protein | |
Spea_2372 | -2 | 15 | -4.262194 | alpha-L-glutamate ligase-like protein | |
Spea_2373 | -2 | 15 | -3.913504 | peptidase M3A and M3B, thimet/oligopeptidase F | |
Spea_2374 | -1 | 18 | -3.132980 | hypothetical protein | |
Spea_2375 | -2 | 21 | -3.431822 | histidine kinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2373 | TYPE4SSCAGA | 30 | 0.027 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2375 | HTHFIS | 61 | 9e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
32 | Spea_2408 | Spea_2413 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2408 | 2 | 17 | -2.941272 | intracellular proteinase inhibitor | |
Spea_2409 | 2 | 14 | -3.329482 | AsmA family protein | |
Spea_2410 | 2 | 17 | -2.948381 | ribonuclease activity A regulator | |
Spea_2411 | 2 | 16 | -2.255199 | hypothetical protein | |
Spea_2412 | 2 | 15 | -1.428163 | putative sulfite oxidase subunit YedZ | |
Spea_2413 | 2 | 16 | -0.139526 | putative sulfite oxidase subunit YedY |
33 | Spea_2470 | Spea_2482 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2470 | 0 | 12 | -3.237099 | phenylalanyl-tRNA synthetase subunit alpha | |
Spea_2471 | 0 | 16 | -3.533850 | methyl-accepting chemotaxis sensory transducer | |
Spea_2472 | 0 | 16 | -3.960745 | putative PAS/PAC sensor protein | |
Spea_2473 | -2 | 16 | -2.497359 | hypothetical protein | |
Spea_2474 | -1 | 17 | -3.182011 | hypothetical protein | |
Spea_2475 | 0 | 15 | -1.903040 | hypothetical protein | |
Spea_2476 | -1 | 15 | -2.303860 | hypothetical protein | |
Spea_2477 | 0 | 13 | -2.007704 | pyridoxamine 5'-phosphate oxidase | |
Spea_2478 | -1 | 13 | -2.069448 | agmatinase | |
Spea_2479 | 0 | 12 | -2.343218 | adenosylmethionine decarboxylase | |
Spea_2480 | 1 | 14 | -1.823040 | arginine decarboxylase | |
Spea_2481 | 3 | 18 | -2.821888 | hypothetical protein | |
Spea_2482 | 2 | 14 | -2.287026 | hypothetical protein |
34 | Spea_2588 | Spea_2601 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2588 | 0 | 14 | -3.933803 | chorismate synthase | |
Spea_2589 | 0 | 15 | -4.798980 | N5-glutamine S-adenosyl-L-methionine-dependent | |
Spea_2590 | 0 | 16 | -5.199172 | hypothetical protein | |
Spea_2591 | 1 | 17 | -5.608112 | phosphohistidine phosphatase SixA | |
Spea_2592 | 1 | 19 | -5.958043 | peptidase M16 domain-containing protein | |
Spea_2593 | 1 | 19 | -5.110000 | PAS/PAC sensor-containing diguanylate | |
Spea_2594 | 0 | 18 | 0.788101 | hypothetical protein | |
Spea_2595 | -1 | 17 | 1.576780 | hypothetical protein | |
Spea_2596 | -1 | 13 | 2.153762 | hypothetical protein | |
Spea_2597 | -1 | 12 | 2.227302 | hypothetical protein | |
Spea_2598 | -2 | 11 | 2.186654 | multifunctional fatty acid oxidation complex | |
Spea_2599 | 0 | 13 | 2.219055 | 3-ketoacyl-CoA thiolase | |
Spea_2600 | 1 | 14 | 1.872157 | ATPase | |
Spea_2601 | 2 | 14 | 1.373634 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2600 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
35 | Spea_2675 | Spea_2682 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2675 | 2 | 21 | -0.855417 | ABC transporter-like protein | |
Spea_2676 | 3 | 22 | -0.538447 | trans-2-enoyl-CoA reductase | |
Spea_2677 | 5 | 27 | -0.721513 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
Spea_2678 | 4 | 24 | -0.393756 | histone family protein DNA-binding protein | |
Spea_2679 | 3 | 21 | -0.325969 | ATP-dependent protease La | |
Spea_2680 | 3 | 26 | -0.636144 | ATP-dependent protease ATP-binding subunit ClpX | |
Spea_2681 | 2 | 25 | -0.414300 | ATP-dependent Clp protease proteolytic subunit | |
Spea_2682 | 2 | 23 | -0.747930 | trigger factor |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2675 | PF05272 | 30 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2678 | DNABINDINGHU | 117 | 2e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2679 | HTHFIS | 35 | 0.001 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2680 | HTHFIS | 31 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
36 | Spea_2693 | Spea_2698 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2693 | 2 | 16 | 0.504775 | outer membrane protein | |
Spea_2694 | 4 | 19 | 0.921523 | decaheme cytochrome c MtrF | |
Spea_2695 | 4 | 23 | 0.373913 | decaheme cytochrome c | |
Spea_2696 | 5 | 24 | -0.274018 | hypothetical protein | |
Spea_2697 | 4 | 25 | -0.075107 | decaheme cytochrome c | |
Spea_2698 | 2 | 20 | 0.310311 | decaheme cytochrome c |
37 | Spea_2715 | Spea_2721 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2715 | -3 | 13 | -3.686075 | pyridoxal-dependent decarboxylase | |
Spea_2716 | -2 | 16 | -5.696501 | hypothetical protein | |
Spea_2717 | 0 | 18 | -6.806231 | AraC family transcriptional regulator | |
Spea_2718 | -1 | 16 | -6.111600 | hypothetical protein | |
Spea_2719 | -1 | 16 | -5.158173 | diguanylate cyclase | |
Spea_2720 | -1 | 16 | -4.689170 | basic membrane lipoprotein | |
Spea_2721 | -1 | 17 | -4.415098 | hypothetical protein |
38 | Spea_2775 | Spea_2780 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2775 | 2 | 14 | 2.614529 | hypothetical protein | |
Spea_2776 | 2 | 14 | 3.171227 | short-chain dehydrogenase/reductase SDR | |
Spea_2777 | 2 | 13 | 3.397331 | 3-ketoacyl-ACP reductase | |
Spea_2778 | 3 | 15 | 4.313317 | 3-hydroxyisobutyrate dehydrogenase | |
Spea_2779 | 1 | 14 | 3.714581 | enoyl-CoA hydratase/isomerase | |
Spea_2780 | 1 | 15 | 3.198183 | enoyl-CoA hydratase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2777 | DHBDHDRGNASE | 107 | 4e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
39 | Spea_2793 | Spea_2798 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2793 | 0 | 13 | 3.218449 | 1,4-dihydroxy-2-naphthoate | |
Spea_2794 | 0 | 15 | 3.230846 | 6-phosphogluconate dehydrogenase | |
Spea_2795 | -1 | 15 | 3.580504 | AMP-dependent synthetase and ligase | |
Spea_2796 | 0 | 17 | 3.460555 | MerR family transcriptional regulator | |
Spea_2797 | -1 | 17 | 3.672374 | acyl-CoA dehydrogenase domain-containing | |
Spea_2798 | 0 | 17 | 3.432316 | propionyl-CoA carboxylase |
40 | Spea_2812 | Spea_2846 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2812 | 2 | 13 | 1.106756 | nitrite reductase | |
Spea_2813 | 4 | 24 | 0.946518 | hypothetical protein | |
Spea_2814 | 4 | 24 | 0.879776 | endoribonuclease L-PSP | |
Spea_2815 | 4 | 24 | 1.063990 | hypothetical protein | |
Spea_2816 | 3 | 24 | 0.591400 | cytoplasmic chaperone TorD family protein | |
Spea_2817 | 2 | 20 | 0.429871 | dimethylsulfoxide reductase subunit B | |
Spea_2818 | 2 | 19 | 0.069653 | anaerobic dimethyl sulfoxide reductase subunit | |
Spea_2819 | 0 | 11 | -0.601074 | outer membrane protein | |
Spea_2820 | 2 | 12 | -0.222751 | cytochrome C family protein | |
Spea_2821 | 2 | 17 | 0.402146 | isoprenylcysteine carboxyl methyltransferase | |
Spea_2822 | 0 | 15 | 0.736108 | hypothetical protein | |
Spea_2823 | 1 | 17 | 1.017840 | hypothetical protein | |
Spea_2824 | 0 | 17 | 0.830234 | hypothetical protein | |
Spea_2825 | 0 | 17 | 1.157218 | MoxR-like protein ATPase-like protein | |
Spea_2826 | 1 | 18 | 0.408135 | hypothetical protein | |
Spea_2827 | 1 | 17 | -0.050640 | hypothetical protein | |
Spea_2828 | 0 | 17 | -1.298527 | hypothetical protein | |
Spea_2829 | 0 | 17 | -3.375308 | hypothetical protein | |
Spea_2830 | -1 | 15 | -3.917693 | hypothetical protein | |
Spea_2831 | 0 | 19 | -3.982365 | hypothetical protein | |
Spea_2832 | 1 | 22 | -5.286340 | hypothetical protein | |
Spea_2833 | 2 | 26 | -6.305882 | hypothetical protein | |
Spea_2834 | 1 | 24 | -5.272184 | hypothetical protein | |
Spea_2835 | 0 | 21 | -3.406206 | hypothetical protein | |
Spea_2836 | 1 | 21 | -2.351384 | Sel1 domain-containing protein | |
Spea_2837 | -1 | 23 | -3.522826 | hypothetical protein | |
Spea_2838 | -1 | 22 | -3.264893 | hypothetical protein | |
Spea_2839 | -1 | 22 | -3.519443 | hypothetical protein | |
Spea_2841 | -1 | 24 | -4.745491 | putative hydrolase | |
Spea_2842 | 0 | 25 | -5.317475 | hypothetical protein | |
Spea_2843 | -2 | 23 | -5.499902 | TonB-dependent receptor | |
Spea_2844 | -2 | 19 | -4.955638 | LysR family transcriptional regulator | |
Spea_2845 | -1 | 15 | -3.956772 | hypothetical protein | |
Spea_2846 | -1 | 13 | -3.527464 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2841 | PF06057 | 30 | 0.010 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component |
41 | Spea_2877 | Spea_2894 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2877 | 2 | 17 | -1.313174 | surface antigen (D15) | |
Spea_2878 | 0 | 16 | -0.872450 | putative membrane-associated zinc | |
Spea_2879 | 0 | 20 | -1.469928 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | |
Spea_2880 | 2 | 31 | -1.395406 | phosphatidate cytidylyltransferase | |
Spea_2881 | 3 | 33 | -1.544128 | undecaprenyl diphosphate synthase | |
Spea_2882 | 2 | 23 | -1.229439 | ribosome recycling factor | |
Spea_2883 | 1 | 25 | -0.875043 | uridylate kinase | |
Spea_2884 | 2 | 24 | -1.017869 | elongation factor Ts | |
Spea_2885 | 1 | 16 | -0.619302 | 30S ribosomal protein S2 | |
Spea_2886 | 0 | 11 | -0.428131 | methionine aminopeptidase | |
Spea_2887 | -1 | 12 | -0.290563 | PII uridylyl-transferase | |
Spea_2888 | -1 | 15 | -0.565986 | 2,3,4,5-tetrahydropyridine-2,6-carboxylate | |
Spea_2889 | -1 | 19 | -1.193345 | hypothetical protein | |
Spea_2890 | 0 | 22 | -1.440821 | flavodoxin | |
Spea_2891 | 0 | 20 | -1.640349 | pseudouridine synthase | |
Spea_2892 | 4 | 21 | -2.500060 | hypothetical protein | |
Spea_2893 | 5 | 21 | -2.738310 | hypothetical protein | |
Spea_2894 | 6 | 27 | -3.121293 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2877 | ENTEROVIROMP | 33 | 0.002 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein |
42 | Spea_2903 | Spea_2921 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2903 | 2 | 14 | 1.970992 | LysR family transcriptional regulator | |
Spea_2904 | 1 | 15 | 2.452955 | beta-lactamase domain-containing protein | |
Spea_2905 | 1 | 17 | 2.814372 | 4'-phosphopantetheinyl transferase | |
Spea_2906 | 0 | 17 | 2.701066 | transcriptional regulator | |
Spea_2907 | 1 | 18 | 2.645980 | polyketide-type polyunsaturated fatty acid | |
Spea_2908 | -1 | 13 | 2.530590 | PfaB family protein | |
Spea_2909 | -2 | 13 | 2.469154 | beta-hydroxyacyl-(acyl-carrier-protein) | |
Spea_2910 | 0 | 12 | 1.204552 | PfaD family protein | |
Spea_2912 | 0 | 16 | -3.002027 | diguanylate cyclase | |
Spea_2913 | 0 | 20 | -3.694489 | hypothetical protein | |
Spea_2914 | 0 | 21 | -3.909861 | penicillin amidase | |
Spea_2915 | 2 | 35 | -9.607716 | hypothetical protein | |
Spea_2916 | 3 | 39 | -10.978040 | hypothetical protein | |
Spea_2917 | 0 | 35 | -9.430377 | putative deoxyguanosinetriphosphate | |
Spea_2918 | 0 | 30 | -8.595653 | hypothetical protein | |
Spea_2919 | 1 | 32 | -8.691780 | integrase, catalytic region | |
Spea_2920 | 2 | 31 | -8.395317 | hypothetical protein | |
Spea_2921 | 1 | 20 | -5.659952 | radical SAM domain-containing protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2907 | PF03544 | 33 | 0.012 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2913 | BCTERIALGSPG | 48 | 2e-09 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G |
43 | Spea_3052 | Spea_3060 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3052 | 2 | 25 | -1.001888 | hypothetical protein | |
Spea_3053 | 2 | 24 | -0.889606 | peptide chain release factor 3 | |
Spea_3054 | 3 | 23 | -1.047854 | lipoprotein NlpI | |
Spea_3055 | 4 | 34 | -0.561480 | polynucleotide phosphorylase/polyadenylase | |
Spea_3056 | 5 | 28 | -0.412937 | diguanylate cyclase/phosphodiesterase | |
Spea_3057 | 6 | 36 | -0.387428 | 30S ribosomal protein S15 | |
Spea_3058 | 6 | 35 | -0.417571 | tRNA pseudouridine synthase B | |
Spea_3059 | 5 | 36 | -0.421721 | ribosome-binding factor A | |
Spea_3060 | 3 | 32 | 0.145173 | translation initiation factor IF-2 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3052 | BINARYTOXINB | 26 | 0.026 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3053 | TCRTETOQM | 203 | 2e-60 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3055 | RTXTOXIND | 33 | 0.004 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3060 | TCRTETOQM | 74 | 2e-15 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
44 | Spea_3215 | Spea_3227 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3215 | 2 | 11 | 0.160069 | dihydroorotase | |
Spea_3216 | 2 | 12 | -1.144573 | hypothetical protein | |
Spea_3217 | 2 | 11 | -1.344783 | hypothetical protein | |
Spea_3218 | 1 | 12 | -2.229630 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
Spea_3219 | 0 | 13 | -2.562314 | glucose sorbosone dehydrogenase | |
Spea_3220 | 0 | 15 | -3.801108 | hypothetical protein | |
Spea_3221 | -1 | 18 | -4.678062 | glutathione synthetase | |
Spea_3222 | -1 | 20 | -2.973171 | hypothetical protein | |
Spea_3223 | -1 | 19 | -2.446586 | diguanylate cyclase | |
Spea_3224 | 0 | 16 | -1.647825 | outer membrane adhesin-like protein | |
Spea_3225 | 1 | 17 | -1.006723 | hypothetical protein | |
Spea_3226 | 1 | 18 | -0.092892 | LVIVD repeat-containing protein | |
Spea_3227 | 2 | 20 | 1.013896 | ferredoxin-dependent glutamate synthase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3221 | HELNAPAPROT | 28 | 0.032 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3224 | FLAGELLIN | 31 | 0.009 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. |
45 | Spea_3280 | Spea_3311 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3280 | 3 | 26 | 3.423343 | multiple resistance and pH regulation protein F | |
Spea_3281 | 3 | 25 | 3.189510 | monovalent cation/proton antiporter subunit | |
Spea_3282 | 4 | 25 | 3.498105 | putative monovalent cation/H+ antiporter subunit | |
Spea_3283 | 4 | 24 | 1.733798 | NADH-ubiquinone oxidoreductase chain 4L | |
Spea_3284 | 3 | 21 | 1.306995 | putative monovalent cation/H+ antiporter subunit | |
Spea_3285 | 3 | 19 | -0.310994 | NADH dehydrogenase (quinone) | |
Spea_3286 | 2 | 17 | -2.506436 | hypothetical protein | |
Spea_3287 | 1 | 17 | -2.468450 | putative monovalent cation/H+ antiporter subunit | |
Spea_3288 | 1 | 19 | -5.583275 | hypothetical protein | |
Spea_3289 | 0 | 19 | -4.561078 | hypothetical protein | |
Spea_3290 | 2 | 23 | -4.466692 | hypothetical protein | |
Spea_3291 | 4 | 24 | -5.945344 | hypothetical protein | |
Spea_3292 | 4 | 27 | -6.983479 | hypothetical protein | |
Spea_3293 | 6 | 32 | -9.578847 | hypothetical protein | |
Spea_3294 | 5 | 34 | -9.335945 | hypothetical protein | |
Spea_3295 | 3 | 35 | -9.255356 | hypothetical protein | |
Spea_3296 | 0 | 20 | -4.135853 | hypothetical protein | |
Spea_3297 | 0 | 20 | -2.869705 | hypothetical protein | |
Spea_3298 | 0 | 22 | -1.149320 | NACHT family-like NTPase | |
Spea_3299 | 1 | 24 | 3.109767 | hypothetical protein | |
Spea_3300 | 1 | 23 | 4.133537 | hypothetical protein | |
Spea_3301 | 0 | 24 | 4.350783 | glycine dehydrogenase | |
Spea_3302 | 0 | 16 | 3.982169 | glycine cleavage system protein H | |
Spea_3303 | 0 | 15 | 3.566387 | glycine cleavage system aminomethyltransferase | |
Spea_3304 | 1 | 15 | 2.627027 | UbiH/UbiF/VisC/COQ6 family ubiquinone | |
Spea_3305 | 2 | 17 | 1.676534 | 2-polyprenyl-6-methoxyphenol 4-hydroxylase | |
Spea_3306 | 1 | 17 | 0.399225 | yecA family protein | |
Spea_3307 | 3 | 17 | -0.181475 | hypothetical protein | |
Spea_3308 | 4 | 16 | -0.182360 | hypothetical protein | |
Spea_3309 | 4 | 17 | 0.806653 | hypothetical protein | |
Spea_3310 | 3 | 17 | 1.272308 | hypothetical protein | |
Spea_3311 | 2 | 17 | 1.323687 | 5-formyltetrahydrofolate cyclo-ligase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3309 | BACINVASINB | 29 | 0.016 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. |
46 | Spea_3325 | Spea_3336 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3325 | 2 | 16 | 1.232044 | pyridoxamine 5'-phosphate oxidase-like | |
Spea_3326 | 2 | 16 | 1.391879 | hypothetical protein | |
Spea_3327 | 2 | 15 | 2.483921 | TonB-dependent heme/hemoglobin receptor family | |
Spea_3328 | 4 | 16 | 3.339490 | TonB family protein | |
Spea_3329 | 3 | 17 | 2.554964 | MotA/TolQ/ExbB proton channel | |
Spea_3330 | 2 | 20 | 1.742108 | biopolymer transport protein ExbD/TolR | |
Spea_3331 | 1 | 17 | 1.722235 | periplasmic-binding protein | |
Spea_3332 | 2 | 20 | 1.367020 | transport system permease | |
Spea_3333 | -1 | 19 | -0.690837 | hemin importer ATP-binding subunit | |
Spea_3334 | 1 | 21 | -0.026263 | TetR family transcriptional regulator | |
Spea_3335 | 2 | 19 | 0.087216 | deaminase-reductase domain-containing protein | |
Spea_3336 | 3 | 18 | 0.276900 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3328 | PF03544 | 75 | 2e-18 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3333 | PF05272 | 29 | 0.026 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3334 | TETREPRESSOR | 46 | 2e-08 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. |
47 | Spea_3376 | Spea_3388 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3376 | -1 | 22 | 4.336822 | cob(I)yrinic acid a,c-diamide | |
Spea_3377 | 1 | 21 | 4.107365 | cobyric acid synthase | |
Spea_3378 | 2 | 22 | 4.293770 | cobalbumin biosynthesis protein | |
Spea_3379 | 0 | 18 | 3.954208 | cobalamin 5'-phosphate synthase | |
Spea_3380 | 0 | 13 | 2.142831 | nicotinate-nucleotide--dimethylbenzimidazole | |
Spea_3381 | -1 | 11 | 1.632055 | transport system permease | |
Spea_3382 | -1 | 9 | 0.807867 | ABC transporter-like protein | |
Spea_3383 | -1 | 11 | 0.005271 | phosphoglycerate mutase | |
Spea_3384 | 0 | 11 | -0.635129 | B12-dependent methionine synthase | |
Spea_3385 | -2 | 15 | -3.297497 | TonB-dependent receptor | |
Spea_3386 | -2 | 18 | -3.846807 | hypothetical protein | |
Spea_3387 | -1 | 15 | -3.688738 | glutathione-dependent formaldehyde-activating | |
Spea_3388 | -1 | 15 | -3.193424 | FAD-dependent pyridine nucleotide-disulfide |
48 | Spea_3444 | Spea_3482 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3444 | 0 | 19 | 3.563562 | anaerobic nitric oxide reductase transcriptional | |
Spea_3445 | 0 | 22 | 3.589799 | peptidase M16 domain-containing protein | |
Spea_3446 | -1 | 23 | 3.389936 | peptidase M16 domain-containing protein | |
Spea_3447 | -1 | 23 | 3.936993 | StbA family protein | |
Spea_3448 | 0 | 18 | 2.866609 | hypothetical protein | |
Spea_3449 | -2 | 13 | 0.640945 | D-serine dehydratase | |
Spea_3450 | -1 | 11 | -1.876600 | permease DsdX | |
Spea_3451 | 1 | 18 | -3.903448 | DNA-binding transcriptional regulator DsdC | |
Spea_3452 | 1 | 28 | -6.093671 | ATPase-like protein | |
Spea_3453 | 3 | 28 | -7.706185 | hypothetical protein | |
Spea_3454 | 2 | 29 | -7.699195 | phage exclusion protein Lit | |
Spea_3455 | 3 | 30 | -7.105998 | hypothetical protein | |
Spea_3456 | 2 | 28 | -6.872665 | hypothetical protein | |
Spea_3457 | 3 | 26 | -7.056236 | XRE family transcriptional regulator | |
Spea_3458 | 1 | 19 | -6.249354 | hypothetical protein | |
Spea_3459 | 2 | 19 | -6.222277 | type III restriction protein res subunit | |
Spea_3460 | 2 | 19 | -5.782189 | hypothetical protein | |
Spea_3461 | 0 | 17 | -4.511336 | hypothetical protein | |
Spea_3462 | 0 | 18 | -4.381069 | hypothetical protein | |
Spea_3463 | -1 | 16 | -4.149537 | integrase family protein | |
Spea_3464 | -1 | 15 | -3.792205 | hypothetical protein | |
Spea_3465 | -2 | 16 | -2.557182 | integrase family protein | |
Spea_3466 | -1 | 17 | -1.562612 | AFG1 family ATPase | |
Spea_3467 | 1 | 19 | -2.385590 | transposase IS116/IS110/IS902 family protein | |
Spea_3468 | 2 | 19 | -1.252891 | hypothetical protein | |
Spea_3469 | 2 | 20 | -2.034209 | hypothetical protein | |
Spea_3470 | 2 | 20 | -1.092113 | hypothetical protein | |
Spea_3471 | 1 | 21 | -0.162953 | hypothetical protein | |
Spea_3472 | 0 | 21 | 2.555705 | hypothetical protein | |
Spea_3473 | 1 | 20 | 2.918123 | hypothetical protein | |
Spea_3474 | 3 | 20 | 2.971351 | hypothetical protein | |
Spea_3475 | 1 | 20 | 3.497586 | hypothetical protein | |
Spea_3476 | 1 | 20 | 3.099287 | hypothetical protein | |
Spea_3477 | 0 | 17 | 3.363279 | bifunctional glutamine-synthetase | |
Spea_3478 | -1 | 16 | 2.421437 | hypothetical protein | |
Spea_3479 | -2 | 17 | 1.663275 | hypothetical protein | |
Spea_3480 | -1 | 15 | 1.410124 | spermidine synthase | |
Spea_3481 | 2 | 11 | -0.463510 | hypothetical protein | |
Spea_3482 | 3 | 11 | -0.545981 | phage shock protein A |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3444 | HTHFIS | 385 | e-132 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3447 | SHAPEPROTEIN | 29 | 0.030 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3458 | PF05616 | 30 | 0.007 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3462 | FbpA_PF05833 | 31 | 6e-04 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein |
49 | Spea_3517 | Spea_3525 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3517 | 2 | 15 | -0.612052 | metal-dependent hydrolase HDOD | |
Spea_3518 | 2 | 15 | -0.254184 | peptidase S9 prolyl oligopeptidase | |
Spea_3519 | 6 | 19 | 0.269832 | glutamine amidotransferase of anthranilate | |
Spea_3520 | 7 | 21 | 0.336833 | hypothetical protein | |
Spea_3521 | 6 | 21 | 0.561792 | TonB family protein | |
Spea_3522 | 7 | 21 | 0.454129 | biopolymer transport protein ExbD/TolR | |
Spea_3523 | 5 | 19 | 0.494176 | MotA/TolQ/ExbB proton channel | |
Spea_3524 | 5 | 19 | 1.084868 | MotA/TolQ/ExbB proton channel | |
Spea_3525 | 2 | 18 | 0.950354 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3521 | PF03544 | 67 | 2e-15 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3524 | RTXTOXIND | 33 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
50 | Spea_3634 | Spea_3643 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3634 | 2 | 16 | 0.099760 | major facilitator transporter | |
Spea_3635 | 1 | 18 | 1.593398 | 23S rRNA methyluridine methyltransferase | |
Spea_3636 | 1 | 24 | 3.182530 | TOBE domain-containing protein | |
Spea_3637 | 4 | 28 | 4.526111 | hypothetical protein | |
Spea_3638 | 4 | 28 | 4.764213 | hypothetical protein | |
Spea_3639 | 2 | 27 | 5.316494 | hypothetical protein | |
Spea_3640 | 2 | 28 | 5.331532 | ABC transporter-like protein | |
Spea_3641 | 2 | 28 | 5.160880 | ABC transporter-like protein | |
Spea_3642 | 1 | 27 | 4.344737 | binding-protein-dependent transport system inner | |
Spea_3643 | -1 | 19 | 3.086027 | binding-protein-dependent transport system inner |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3634 | TCRTETA | 29 | 0.029 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3640 | PF05272 | 31 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
51 | Spea_3681 | Spea_3714 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3681 | 0 | 24 | -3.989866 | hypothetical protein | |
Spea_3682 | 0 | 25 | -5.053578 | hypothetical protein | |
Spea_3683 | 1 | 28 | -6.504192 | hypothetical protein | |
Spea_3684 | 2 | 30 | -3.554384 | hypothetical protein | |
Spea_3685 | 2 | 31 | -3.629831 | NERD domain-containing protein | |
Spea_3686 | 0 | 23 | -1.620736 | hypothetical protein | |
Spea_3687 | 2 | 23 | 1.342511 | hypothetical protein | |
Spea_3688 | 2 | 23 | 2.225679 | hypothetical protein | |
Spea_3689 | 0 | 23 | 3.510685 | chaperonin GroEL | |
Spea_3690 | -1 | 26 | 4.505066 | co-chaperonin GroES | |
Spea_3691 | -1 | 28 | 4.509451 | MATE efflux family protein | |
Spea_3692 | 0 | 25 | 3.779100 | pentapeptide repeat-containing protein | |
Spea_3693 | 0 | 24 | 3.506070 | hypothetical protein | |
Spea_3694 | -1 | 24 | 3.244051 | LysR family transcriptional regulator | |
Spea_3695 | -1 | 23 | 3.052073 | RND family efflux transporter MFP subunit | |
Spea_3696 | 0 | 21 | 3.565915 | acriflavin resistance protein | |
Spea_3697 | 2 | 21 | 3.895171 | hypothetical protein | |
Spea_3698 | 2 | 21 | 3.831041 | hypothetical protein | |
Spea_3699 | 3 | 20 | 3.786776 | hypothetical protein | |
Spea_3700 | 2 | 20 | 3.961380 | hypothetical protein | |
Spea_3701 | 2 | 19 | 3.760327 | hypothetical protein | |
Spea_3702 | 3 | 18 | 2.610088 | PAS/PAC sensor hybrid histidine kinase | |
Spea_3703 | 1 | 12 | 0.933097 | PhoH family protein | |
Spea_3704 | 1 | 11 | 0.482242 | ATP-dependent helicase HepA | |
Spea_3705 | 1 | 15 | -1.002508 | hypothetical protein | |
Spea_3706 | 0 | 16 | -1.733281 | transposase | |
Spea_3707 | 1 | 16 | -1.568560 | integrase catalytic subunit | |
Spea_3708 | 1 | 15 | -0.682756 | hypothetical protein | |
Spea_3709 | 2 | 21 | 0.890792 | enoyl-CoA hydratase | |
Spea_3710 | 4 | 21 | 1.896804 | MCP methylation inhibitor CheC | |
Spea_3711 | 2 | 20 | 2.327599 | diguanylate cyclase | |
Spea_3712 | 2 | 19 | 2.747535 | hypothetical protein | |
Spea_3713 | 0 | 18 | 2.413539 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | |
Spea_3714 | 2 | 14 | 1.608069 | ABC-3 protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3691 | SECFTRNLCASE | 30 | 0.015 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3692 | NUCEPIMERASE | 31 | 0.003 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3695 | RTXTOXIND | 48 | 4e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3696 | ACRIFLAVINRP | 488 | e-158 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3702 | HTHFIS | 78 | 8e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3710 | HTHFIS | 67 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
52 | Spea_3742 | Spea_3747 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3742 | 0 | 13 | 3.177163 | Ig domain-containing protein | |
Spea_3743 | 2 | 19 | 4.247998 | ABC-2 type transporter | |
Spea_3744 | 0 | 19 | 4.037866 | ABC-2 type transporter | |
Spea_3745 | 1 | 18 | 3.831951 | secretion protein HlyD family protein | |
Spea_3746 | 1 | 18 | 3.573628 | outer membrane efflux protein | |
Spea_3747 | 0 | 17 | 3.217323 | peptidase U62 modulator of DNA gyrase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3742 | INTIMIN | 39 | 8e-05 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3745 | RTXTOXIND | 41 | 6e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
53 | Spea_3853 | Spea_3869 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3853 | 2 | 22 | 1.501629 | GntR family transcriptional regulator | |
Spea_3854 | 3 | 21 | 1.921612 | LysR family transcriptional regulator | |
Spea_3855 | 4 | 24 | 2.530450 | D-galactarate dehydratase/Altronate hydrolase | |
Spea_3856 | 3 | 24 | 3.030924 | D-galactarate dehydratase | |
Spea_3857 | 3 | 24 | 3.155957 | putative transporter | |
Spea_3858 | 3 | 24 | 3.307940 | mandelate racemase/muconate lactonizing protein | |
Spea_3859 | 2 | 21 | 2.789187 | cytochrome C family protein | |
Spea_3860 | 2 | 21 | 2.389459 | hypothetical protein | |
Spea_3861 | 3 | 16 | 1.512004 | anaerobic dimethyl sulfoxide reductase subunit | |
Spea_3862 | 3 | 15 | 1.032053 | dimethylsulfoxide reductase subunit B | |
Spea_3863 | 2 | 12 | 0.926534 | hypothetical protein | |
Spea_3864 | 2 | 15 | 2.704085 | cytoplasmic chaperone TorD family protein | |
Spea_3865 | 2 | 15 | 2.666725 | hypothetical protein | |
Spea_3866 | 1 | 15 | 2.860671 | TetR family transcriptional regulator | |
Spea_3867 | 2 | 14 | 3.114797 | OPT family oligopeptide transporter | |
Spea_3868 | 2 | 16 | 2.911209 | OmpA/MotB domain-containing protein | |
Spea_3869 | 2 | 16 | 2.963071 | outer membrane adhesin-like protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3866 | HTHTETR | 67 | 1e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3868 | OMPADOMAIN | 122 | 1e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3869 | CHLAMIDIAOM6 | 32 | 0.044 | Chlamydia cysteine-rich outer membrane protein 6 si... | |
>CHLAMIDIAOM6#Chlamydia cysteine-rich outer membrane protein 6 |
54 | Spea_3881 | Spea_3902 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3881 | -1 | 17 | 3.161062 | tRNA guanosine-2'-O-methyltransferase | |
Spea_3882 | -1 | 16 | 3.026625 | AMP-dependent synthetase and ligase | |
Spea_3883 | -1 | 17 | 3.271185 | CaCA family Na(+)/Ca(+) antiporter | |
Spea_3884 | -1 | 18 | 3.324454 | ATP-dependent DNA helicase RecG | |
Spea_3885 | -2 | 20 | 2.203964 | hypothetical protein | |
Spea_3886 | -1 | 22 | 3.077050 | hypothetical protein | |
Spea_3887 | -1 | 23 | 2.731063 | phospholipid/glycerol acyltransferase | |
Spea_3888 | -1 | 22 | 3.082289 | acyl carrier protein | |
Spea_3889 | -1 | 21 | 3.909919 | acyl carrier protein | |
Spea_3890 | -2 | 21 | 4.012618 | hypothetical protein | |
Spea_3891 | -1 | 21 | 3.846137 | hypothetical protein | |
Spea_3892 | 0 | 22 | 3.668933 | beta-hydroxyacyl-(acyl-carrier-protein) | |
Spea_3893 | 0 | 23 | 3.791166 | glycosyl transferase family protein | |
Spea_3894 | 1 | 22 | 3.634336 | histidine ammonia-lyase | |
Spea_3895 | 2 | 24 | 3.609481 | 4-hydroxybenzoyl-CoA thioesterase | |
Spea_3896 | 3 | 25 | 3.662659 | outer membrane lipoprotein carrier protein LolA | |
Spea_3897 | 2 | 25 | 4.001201 | hypothetical protein | |
Spea_3898 | 0 | 23 | 4.649796 | tryptophan halogenase | |
Spea_3899 | 1 | 22 | 4.545577 | hypothetical protein | |
Spea_3900 | 2 | 21 | 4.449360 | 3-oxoacyl-ACP synthase | |
Spea_3901 | 1 | 19 | 3.792689 | beta-hydroxyacyl-(acyl-carrier-protein) | |
Spea_3902 | -1 | 16 | 3.156665 | 3-ketoacyl-ACP reductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3884 | SECA | 41 | 2e-05 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3885 | TONBPROTEIN | 33 | 6e-04 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3897 | ACRIFLAVINRP | 42 | 9e-06 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3902 | DHBDHDRGNASE | 103 | 5e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
55 | Spea_3917 | Spea_3949 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3917 | 2 | 17 | 0.637854 | sodium:dicarboxylate symporter | |
Spea_3918 | 0 | 20 | 1.555994 | hypothetical protein | |
Spea_3919 | 0 | 19 | 2.203211 | XRE family transcriptional regulator | |
Spea_3920 | 0 | 17 | 2.318956 | BNR repeat-containing glycosyl hydrolase | |
Spea_3921 | -2 | 17 | 2.461410 | hypothetical protein | |
Spea_3922 | -2 | 17 | 2.570112 | class V aminotransferase | |
Spea_3923 | -2 | 17 | 2.102299 | hypothetical protein | |
Spea_3924 | -2 | 18 | 2.038608 | AsnC family transcriptional regulator | |
Spea_3925 | -1 | 18 | 3.224906 | iron-containing alcohol dehydrogenase | |
Spea_3926 | -1 | 18 | 3.570778 | ThiJ/PfpI domain-containing protein | |
Spea_3927 | -1 | 18 | 3.192596 | hypothetical protein | |
Spea_3928 | -1 | 19 | 3.548685 | hypothetical protein | |
Spea_3929 | 0 | 20 | 3.695452 | signal transduction histidine kinase, nitrogen | |
Spea_3930 | 1 | 20 | 4.119213 | nitrogen metabolism transcriptional regulator | |
Spea_3931 | 1 | 19 | 2.970556 | cation diffusion facilitator family transporter | |
Spea_3932 | 0 | 14 | 1.532513 | hypothetical protein | |
Spea_3933 | 0 | 15 | 1.396851 | two component transcriptional regulator | |
Spea_3934 | -1 | 15 | 1.407838 | histidine kinase | |
Spea_3935 | 0 | 14 | 1.250944 | regulatory protein TetR | |
Spea_3936 | 1 | 15 | 1.413035 | LysR family transcriptional regulator | |
Spea_3937 | 0 | 17 | 2.247074 | hypothetical protein | |
Spea_3938 | -1 | 17 | 3.147323 | tetraheme cytochrome c | |
Spea_3939 | -1 | 18 | 3.424301 | flavocytochrome c | |
Spea_3940 | -2 | 21 | 3.784861 | LysR family transcriptional regulator | |
Spea_3941 | -2 | 22 | 3.850275 | quinone oxidoreductase | |
Spea_3942 | -2 | 23 | 3.461367 | aldehyde dehydrogenase | |
Spea_3943 | -2 | 23 | 3.188686 | hypothetical protein | |
Spea_3944 | -2 | 23 | 2.941288 | radical SAM domain-containing protein | |
Spea_3945 | -1 | 22 | 2.369157 | LysR family transcriptional regulator | |
Spea_3946 | -1 | 19 | 1.773756 | RNA methyltransferase | |
Spea_3947 | 0 | 19 | 1.733140 | peptidase M16 domain-containing protein | |
Spea_3948 | 1 | 18 | 0.704048 | peptidase M16 domain-containing protein | |
Spea_3949 | 2 | 19 | -0.044121 | type IV pilus assembly PilZ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3922 | ADHESNFAMILY | 29 | 0.022 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3929 | PF06580 | 45 | 2e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3930 | HTHFIS | 569 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3933 | HTHFIS | 98 | 6e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3934 | PF06580 | 37 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3935 | HTHTETR | 38 | 7e-06 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3939 | HTHFIS | 31 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3941 | NUCEPIMERASE | 29 | 0.017 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
56 | Spea_3962 | Spea_4028 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3962 | 2 | 15 | -0.827424 | hypothetical protein | |
Spea_3963 | 1 | 15 | -2.466612 | hypothetical protein | |
Spea_3964 | 0 | 15 | -4.140650 | hypothetical protein | |
Spea_3965 | -1 | 15 | -4.820327 | polysulfide reductase NrfD | |
Spea_3966 | 0 | 10 | -2.883452 | 4Fe-4S ferredoxin | |
Spea_3967 | 2 | 11 | -2.377421 | formate-dependent nitrite reductase | |
Spea_3968 | 1 | 14 | -1.299646 | hypothetical protein | |
Spea_3969 | 2 | 16 | 0.700461 | LysR family transcriptional regulator | |
Spea_3970 | 3 | 18 | 2.030143 | LysR family transcriptional regulator | |
Spea_3971 | 3 | 19 | 2.391539 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- | |
Spea_3972 | 3 | 18 | 1.542459 | alpha/beta hydrolase fold protein | |
Spea_3973 | 2 | 16 | 1.470524 | O-succinylbenzoate synthase | |
Spea_3974 | 1 | 12 | 1.200781 | o-succinylbenzoate--CoA ligase | |
Spea_3975 | 3 | 16 | 0.978189 | hypothetical protein | |
Spea_3976 | 4 | 14 | 1.281718 | transposase IS116/IS110/IS902 family protein | |
Spea_3977 | 4 | 16 | 1.793480 | RNA polymerase factor sigma-32 | |
Spea_3978 | 4 | 16 | 1.747670 | hypothetical protein | |
Spea_3979 | 5 | 18 | 1.347705 | cell division ATP-binding protein FtsE | |
Spea_3980 | 6 | 20 | 0.724843 | signal recognition particle-docking protein | |
Spea_3981 | 0 | 17 | -1.551470 | putative methyltransferase | |
Spea_3982 | 1 | 21 | -2.115286 | hypothetical protein | |
Spea_3983 | 0 | 17 | 1.284603 | NapC/NirT cytochrome c domain-containing | |
Spea_3984 | 0 | 19 | 3.318547 | hypothetical protein | |
Spea_3985 | 1 | 19 | 3.762854 | hypothetical protein | |
Spea_3986 | 1 | 19 | 3.360171 | hypothetical protein | |
Spea_3987 | 0 | 21 | 3.494866 | hypothetical protein | |
Spea_3988 | 0 | 23 | 3.836377 | RND family efflux transporter MFP subunit | |
Spea_3989 | 1 | 22 | 3.084413 | CzcA family heavy metal efflux protein | |
Spea_3990 | 1 | 21 | 1.763111 | glyoxalase/bleomycin resistance | |
Spea_3991 | -1 | 18 | 1.185868 | diguanylate cyclase | |
Spea_3992 | -1 | 17 | 1.581963 | secretion protein HlyD family protein | |
Spea_3993 | -2 | 13 | 1.249005 | major facilitator superfamily permease | |
Spea_3994 | -2 | 10 | 1.299113 | AraC family transcriptional regulator | |
Spea_3995 | -1 | 11 | 1.824466 | aromatic amino acid transporter | |
Spea_3996 | -1 | 11 | 1.576204 | glycerol-3-phosphate acyltransferase | |
Spea_3997 | 2 | 14 | 1.597737 | LexA repressor | |
Spea_3998 | 2 | 15 | 1.306912 | hypothetical protein | |
Spea_3999 | 2 | 15 | 1.140269 | cytochrome c oxidase subunit II | |
Spea_4000 | 2 | 15 | 1.084485 | cytochrome c oxidase subunit I type | |
Spea_4001 | 2 | 19 | 0.609963 | cytochrome C oxidase assembly protein | |
Spea_4002 | 2 | 20 | 1.061191 | cytochrome c oxidase subunit III | |
Spea_4003 | 1 | 16 | 1.414916 | hypothetical protein | |
Spea_4004 | 2 | 17 | 1.949986 | hypothetical protein | |
Spea_4005 | 1 | 14 | 1.801029 | cytochrome oxidase assembly | |
Spea_4006 | 0 | 17 | 2.218979 | protoheme IX farnesyltransferase | |
Spea_4007 | -1 | 18 | 2.476983 | electron transport protein SCO1/SenC | |
Spea_4008 | -1 | 18 | 2.910803 | polysaccharide deacetylase | |
Spea_4009 | -1 | 19 | 3.141712 | MATE efflux family protein | |
Spea_4010 | -1 | 16 | 3.278396 | putative DNA uptake protein | |
Spea_4011 | -1 | 18 | 3.459401 | peptidase M14 carboxypeptidase A | |
Spea_4012 | -1 | 15 | 3.697958 | competence protein ComF | |
Spea_4013 | 0 | 15 | 3.373424 | bioH protein | |
Spea_4014 | 0 | 15 | 2.318917 | hypothetical protein | |
Spea_4015 | 0 | 13 | 1.668185 | RNA-binding S1 domain-containing protein | |
Spea_4016 | -1 | 14 | 0.785944 | transcription elongation factor GreB | |
Spea_4017 | -1 | 10 | 0.218484 | osmolarity response regulator | |
Spea_4018 | -1 | 10 | -0.411624 | osmolarity sensor protein | |
Spea_4019 | 0 | 9 | -0.735676 | methyl-accepting chemotaxis sensory transducer | |
Spea_4020 | 2 | 11 | -2.142127 | LysR family transcriptional regulator | |
Spea_4021 | 3 | 11 | -3.133315 | hypothetical protein | |
Spea_4022 | 5 | 12 | -3.031620 | arylsulfotransferase | |
Spea_4023 | 3 | 13 | -3.463631 | DSBA oxidoreductase | |
Spea_4024 | 4 | 13 | -2.949765 | disulfide bond formation protein DsbB | |
Spea_4025 | 2 | 12 | -3.045119 | TetR family transcriptional regulator | |
Spea_4026 | 2 | 10 | -1.564896 | hypothetical protein | |
Spea_4027 | 2 | 10 | 0.062435 | arylsulfotransferase | |
Spea_4028 | 2 | 16 | 1.547694 | DSBA oxidoreductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3963 | OUTRSURFACE | 28 | 0.020 | Outer surface protein signature. | |
>OUTRSURFACE#Outer surface protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3980 | IGASERPTASE | 64 | 9e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3988 | RTXTOXIND | 42 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3989 | ACRIFLAVINRP | 682 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3992 | RTXTOXIND | 49 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3994 | HTHFIS | 30 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4015 | ANTHRAXTOXNA | 32 | 0.010 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4017 | HTHFIS | 98 | 7e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4018 | PF06580 | 44 | 6e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4025 | HTHTETR | 48 | 3e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
57 | Spea_4072 | Spea_4077 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_4072 | 2 | 30 | 1.832938 | NADH:flavin oxidoreductase | |
Spea_4073 | 2 | 32 | 1.169763 | hypothetical protein | |
Spea_4074 | 4 | 38 | 0.835080 | amidohydrolase | |
Spea_4075 | 3 | 38 | 0.583171 | hypothetical protein | |
Spea_4076 | 2 | 28 | 1.210740 | Asp/Glu racemase | |
Spea_4077 | 2 | 24 | 1.248043 | peptidase M24 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4072 | PYOCINKILLER | 29 | 0.023 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. |
58 | Spea_4125 | Spea_4134 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_4125 | 4 | 33 | 1.532878 | ribokinase-like domain-containing protein | |
Spea_4126 | 4 | 38 | 1.025325 | coproporphyrinogen III oxidase | |
Spea_4127 | 6 | 44 | 1.426313 | formate dehydrogenase subunit gamma | |
Spea_4128 | 6 | 45 | 2.302074 | 4Fe-4S ferredoxin | |
Spea_4129 | 6 | 43 | 2.180001 | molybdopterin oxidoreductase | |
Spea_4130 | 4 | 33 | 1.659354 | formate dehydrogenase region TAT target | |
Spea_4131 | 4 | 35 | 2.034050 | formate dehydrogenase subunit gamma | |
Spea_4132 | 4 | 33 | 2.276252 | 4Fe-4S ferredoxin | |
Spea_4133 | 3 | 31 | 2.433278 | molybdopterin oxidoreductase | |
Spea_4134 | 2 | 23 | 1.892383 | formate dehydrogenase region TAT target |
59 | Spea_4164 | Spea_4211 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_4164 | -2 | 20 | 4.074723 | 1-aminocyclopropane-1-carboxylate deaminase | |
Spea_4165 | -1 | 19 | 4.419557 | Na+/H+ antiporter NhaC | |
Spea_4166 | -1 | 19 | 5.011016 | putative endoribonuclease L-PSP | |
Spea_4167 | -1 | 15 | 3.949611 | LysR family transcriptional regulator | |
Spea_4168 | -2 | 13 | 1.755438 | histidine ammonia-lyase | |
Spea_4169 | -3 | 9 | -0.699911 | urocanate hydratase | |
Spea_4170 | -2 | 14 | -2.528283 | histidine utilization repressor | |
Spea_4171 | -1 | 15 | -2.672950 | imidazolonepropionase | |
Spea_4172 | 0 | 19 | -4.512815 | hypothetical protein | |
Spea_4173 | 0 | 14 | -3.191443 | ATPase AAA | |
Spea_4174 | 0 | 16 | -1.483106 | hypothetical protein | |
Spea_4175 | -1 | 15 | -0.648758 | ABC transporter-like protein | |
Spea_4176 | 0 | 15 | -0.527584 | hypothetical protein | |
Spea_4177 | 1 | 18 | -0.577018 | hypothetical protein | |
Spea_4178 | 0 | 18 | -0.276061 | lytic transglycosylase | |
Spea_4179 | 2 | 18 | -0.859770 | hypothetical protein | |
Spea_4180 | 1 | 19 | -0.716313 | 2,3-diketo-5-methylthio-1-phosphopentane | |
Spea_4181 | 2 | 18 | -0.437810 | hypothetical protein | |
Spea_4182 | 1 | 19 | 0.453083 | hypothetical protein | |
Spea_4183 | 0 | 20 | 0.942398 | thioesterase superfamily protein | |
Spea_4184 | 0 | 20 | 1.227796 | hypothetical protein | |
Spea_4185 | -1 | 18 | 2.748285 | thioesterase superfamily protein | |
Spea_4186 | -2 | 18 | 3.127224 | AMP-dependent synthetase and ligase | |
Spea_4187 | -1 | 23 | 4.166316 | hypothetical protein | |
Spea_4188 | -1 | 23 | 4.426836 | ABC transporter-like protein | |
Spea_4189 | -1 | 23 | 4.352925 | GntR family transcriptional regulator | |
Spea_4190 | 0 | 24 | 4.232278 | TAP domain-containing protein | |
Spea_4191 | 0 | 17 | 1.482397 | ABC transporter-like protein | |
Spea_4192 | 0 | 16 | 1.059574 | ABC-2 type transporter | |
Spea_4193 | -1 | 14 | 0.656056 | hypothetical protein | |
Spea_4194 | -2 | 14 | 1.128607 | AraC family transcriptional regulator | |
Spea_4195 | -3 | 14 | 0.942469 | hypothetical protein | |
Spea_4196 | -2 | 13 | 1.599790 | methyl-accepting chemotaxis sensory transducer | |
Spea_4197 | -1 | 20 | 2.695943 | molybdenum cofactor biosynthesis protein MogA | |
Spea_4198 | -1 | 20 | 3.352973 | hypothetical protein | |
Spea_4199 | -1 | 21 | 3.492826 | hypothetical protein | |
Spea_4200 | 0 | 21 | 3.671144 | NLP/P60 protein | |
Spea_4201 | 0 | 22 | 4.014359 | ABC-2 type transporter | |
Spea_4202 | 0 | 22 | 3.865133 | ABC transporter-like protein | |
Spea_4203 | 0 | 18 | 3.261023 | hypothetical protein | |
Spea_4204 | 0 | 17 | 2.784764 | outer membrane protein | |
Spea_4205 | 0 | 17 | 2.759505 | TolC family type I secretion outer membrane | |
Spea_4206 | 0 | 18 | 2.545930 | HlyD family type I secretion membrane fusion | |
Spea_4207 | 0 | 16 | 2.348482 | ABC transporter-like protein | |
Spea_4208 | 0 | 13 | 1.744107 | autotransporter adhesin | |
Spea_4209 | 0 | 14 | 0.094416 | LysR family transcriptional regulator | |
Spea_4210 | 2 | 14 | 0.193977 | glyoxalase/bleomycin resistance | |
Spea_4211 | 2 | 15 | -0.535057 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4171 | UREASE | 35 | 4e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4176 | RTXTOXIND | 29 | 0.027 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4196 | FLAGELLIN | 30 | 0.036 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4201 | ABC2TRNSPORT | 45 | 2e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4203 | RTXTOXIND | 49 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4204 | OMPADOMAIN | 50 | 9e-10 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4206 | RTXTOXIND | 253 | 1e-81 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
60 | Spea_4231 | Spea_4242 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_4231 | 3 | 20 | 0.584857 | phosphate ABC transporter ATP-binding protein | |
Spea_4232 | 3 | 20 | 0.722319 | hypothetical protein | |
Spea_4233 | 3 | 21 | 0.700884 | guanosine 5'-monophosphate oxidoreductase | |
Spea_4234 | 2 | 20 | 0.620922 | glucosamine--fructose-6-phosphate | |
Spea_4235 | 4 | 24 | 0.387583 | DeoR family transcriptional regulator | |
Spea_4236 | 3 | 25 | 0.205183 | TonB-dependent siderophore receptor | |
Spea_4237 | 3 | 31 | 0.835702 | UDP-N-acetylglucosamine pyrophosphorylase | |
Spea_4238 | 5 | 36 | 0.499373 | DsrE family protein | |
Spea_4239 | 5 | 35 | 0.543756 | F0F1 ATP synthase subunit epsilon | |
Spea_4240 | 4 | 36 | 0.069925 | F0F1 ATP synthase subunit beta | |
Spea_4241 | 3 | 30 | -0.975375 | F0F1 ATP synthase subunit gamma | |
Spea_4242 | 2 | 28 | -1.313328 | F0F1 ATP synthase subunit alpha |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4235 | FRAGILYSIN | 28 | 0.032 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin |
61 | Spea_0059 | Spea_0092 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0059 | 3 | 16 | 0.612358 | flagellar hook-length control protein | |
Spea_0060 | 3 | 17 | 0.165559 | hypothetical protein | |
Spea_0061 | 1 | 15 | 0.186430 | flagellar protein FliS | |
Spea_0062 | 1 | 14 | 0.248599 | flagellar hook-associated 2 domain-containing | |
Spea_0063 | -1 | 15 | 1.080247 | flagellin domain-containing protein | |
Spea_0064 | -1 | 16 | 1.519415 | hypothetical protein | |
Spea_0065 | -1 | 17 | 2.258060 | flagellar hook-associated protein 3 | |
Spea_0066 | -1 | 16 | 3.198643 | flagellar hook-associated protein FlgK | |
Spea_0067 | 0 | 19 | 4.061465 | peptidoglycan hydrolase | |
Spea_0068 | 1 | 19 | 3.946305 | flagellar basal body P-ring protein | |
Spea_0069 | 0 | 20 | 3.792177 | flagellar basal body L-ring protein | |
Spea_0070 | -1 | 18 | 3.705652 | flagellar basal-body rod protein FlgG | |
Spea_0071 | -1 | 16 | 3.279088 | flagellar basal-body rod protein FlgF | |
Spea_0072 | 0 | 15 | 2.115665 | flagellar hook protein FlgE | |
Spea_0073 | -1 | 14 | 1.494571 | flagellar hook capping protein | |
Spea_0074 | 1 | 17 | 1.239886 | flagellar basal-body rod protein FlgC | |
Spea_0075 | 0 | 18 | 2.567186 | flagellar basal body rod protein FlgB | |
Spea_0076 | 0 | 16 | 2.976742 | SAF domain-containing protein | |
Spea_0077 | 0 | 15 | 3.228835 | hypothetical protein | |
Spea_0078 | -1 | 14 | 3.262920 | hypothetical protein | |
Spea_0079 | -2 | 15 | 3.276855 | hypothetical protein | |
Spea_0080 | -2 | 15 | 3.369808 | FliI/YscN family ATPase | |
Spea_0081 | 0 | 13 | 2.542393 | flagellar assembly protein H | |
Spea_0082 | -1 | 13 | 2.025727 | flagellar motor switch protein G | |
Spea_0083 | -1 | 14 | 1.655936 | flagellar MS-ring protein | |
Spea_0084 | 0 | 15 | 1.003369 | flagellar hook-basal body complex subunit FliE | |
Spea_0085 | 0 | 15 | 1.031107 | sigma-54 dependent trancsriptional regulator | |
Spea_0086 | 1 | 17 | 0.466893 | OmpA/MotB domain-containing protein | |
Spea_0087 | 1 | 17 | 0.439387 | hypothetical protein | |
Spea_0088 | 0 | 21 | 1.956149 | flagellar motor switch protein FliN | |
Spea_0089 | 0 | 21 | 2.498871 | flagellar biosynthesis protein FliP | |
Spea_0090 | -1 | 20 | 3.260669 | flagellar biosynthetic protein FliQ | |
Spea_0091 | -2 | 19 | 2.625036 | flagellar biosynthetic protein FliR | |
Spea_0092 | -1 | 19 | 2.533014 | flagellar biosynthetic protein FlhB |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0059 | FLGHOOKFLIK | 39 | 2e-05 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0063 | FLAGELLIN | 107 | 2e-28 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0064 | FbpA_PF05833 | 37 | 1e-04 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0065 | FLAGELLIN | 49 | 2e-08 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0066 | FLGHOOKAP1 | 167 | 2e-48 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0067 | FLGFLGJ | 49 | 1e-09 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0068 | FLGPRINGFLGI | 343 | e-119 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0069 | FLGLRINGFLGH | 144 | 5e-45 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0070 | FLGHOOKAP1 | 41 | 2e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0072 | FLGHOOKAP1 | 34 | 0.001 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0074 | FLGHOOKAP1 | 33 | 4e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0077 | 2FE2SRDCTASE | 26 | 0.024 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0081 | FLGFLIH | 62 | 1e-13 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0082 | FLGMOTORFLIG | 174 | 6e-54 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0083 | FLGMRINGFLIF | 306 | 3e-99 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0084 | FLGHOOKFLIE | 50 | 2e-11 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0085 | HTHFIS | 378 | e-130 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0086 | OMPADOMAIN | 66 | 2e-14 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0087 | FLGMOTORFLIM | 31 | 0.004 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0088 | FLGMOTORFLIN | 81 | 4e-23 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0089 | FLGBIOSNFLIP | 243 | 1e-83 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0090 | TYPE3IMQPROT | 48 | 5e-11 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0091 | TYPE3IMRPROT | 121 | 1e-35 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0092 | TYPE3IMSPROT | 314 | e-107 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein |
62 | Spea_0143 | Spea_0150 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0143 | 2 | 13 | 0.415285 | general secretion pathway protein C | |
Spea_0144 | 2 | 12 | 0.526824 | general secretion pathway protein D | |
Spea_0145 | 1 | 16 | 0.982560 | general secretory pathway protein E | |
Spea_0146 | -1 | 16 | 0.548252 | general secretion pathway protein F | |
Spea_0147 | -1 | 17 | 0.775520 | general secretion pathway protein G | |
Spea_0148 | -1 | 18 | 0.945797 | general secretion pathway protein H | |
Spea_0149 | -1 | 19 | 0.507386 | general secretion pathway protein I | |
Spea_0150 | -1 | 18 | 0.371910 | general secretion pathway protein J |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0143 | BCTERIALGSPC | 196 | 1e-63 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0144 | BCTERIALGSPD | 610 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0146 | BCTERIALGSPF | 502 | e-180 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0147 | BCTERIALGSPG | 236 | 1e-83 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0148 | BCTERIALGSPH | 83 | 2e-22 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0149 | PilS_PF08805 | 31 | 9e-04 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0150 | BCTERIALGSPG | 37 | 1e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G |
63 | Spea_0357 | Spea_0375 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0357 | -2 | 12 | -0.065285 | acriflavin resistance protein | |
Spea_0358 | -1 | 12 | -1.234819 | RND family efflux transporter MFP subunit | |
Spea_0359 | 0 | 12 | -1.385809 | TetR family transcriptional regulator | |
Spea_0360 | -1 | 11 | -0.866851 | ATP-dependent DNA helicase Rep | |
Spea_0361 | 0 | 13 | -1.144950 | GAF sensor-containing diguanylate | |
Spea_0362 | -1 | 12 | 0.337439 | ****diguanylate cyclase/phosphodiesterase | |
Spea_0363 | 4 | 19 | 0.285984 | hypothetical protein | |
Spea_0364 | 4 | 18 | 0.459133 | OmpA/MotB domain-containing protein | |
Spea_0365 | 4 | 18 | 0.440214 | TolC family type I secretion outer membrane | |
Spea_0366 | 3 | 18 | 0.345379 | HlyD family type I secretion membrane fusion | |
Spea_0367 | 3 | 18 | 0.352072 | ABC transporter-like protein | |
Spea_0368 | 4 | 20 | 0.275105 | cadherin | |
Spea_0369 | 0 | 10 | 0.558476 | outer membrane adhesin-like protein | |
Spea_0370 | 3 | 11 | 0.340004 | HemY domain-containing protein | |
Spea_0371 | 2 | 11 | 0.516917 | hypothetical protein | |
Spea_0372 | 1 | 14 | 1.359561 | uroporphyrinogen III synthase HEM4 | |
Spea_0373 | 1 | 16 | 1.804625 | porphobilinogen deaminase | |
Spea_0374 | 2 | 22 | 1.532364 | adenylate cyclase | |
Spea_0375 | 2 | 21 | 2.060664 | frataxin family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0357 | ACRIFLAVINRP | 799 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0358 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0359 | HTHTETR | 70 | 4e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0364 | OMPADOMAIN | 76 | 1e-18 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0366 | RTXTOXIND | 299 | 4e-99 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0368 | CABNDNGRPT | 67 | 1e-12 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0369 | CABNDNGRPT | 80 | 3e-17 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0371 | RTXTOXIND | 31 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0375 | MALTOSEBP | 29 | 0.003 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
64 | Spea_0589 | Spea_0595 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0589 | 2 | 21 | -1.633794 | porin | |
Spea_0590 | 0 | 11 | -0.933549 | porin | |
Spea_0591 | 0 | 14 | 0.261808 | UBA/THIF-type NAD/FAD-binding protein | |
Spea_0592 | 0 | 15 | -0.009125 | hypothetical protein | |
Spea_0593 | 0 | 15 | 0.715750 | hypothetical protein | |
Spea_0594 | -1 | 14 | 0.987948 | *peptidase S9 prolyl oligopeptidase | |
Spea_0595 | 0 | 18 | 1.944506 | peptidase M50 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0589 | ECOLNEIPORIN | 57 | 3e-11 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0590 | ECOLNEIPORIN | 59 | 6e-12 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0591 | BONTOXILYSIN | 29 | 0.032 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0595 | SECFTRNLCASE | 29 | 0.039 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. |
65 | Spea_0664 | Spea_0670 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0664 | -2 | 23 | 3.065340 | sulfate adenylyltransferase subunit 1 | |
Spea_0665 | -1 | 23 | 3.011483 | TrkA domain-containing protein | |
Spea_0666 | -2 | 19 | 2.768535 | adenylylsulfate kinase | |
Spea_0667 | -2 | 17 | 3.092147 | N-acetyltransferase GCN5 | |
Spea_0668 | -2 | 17 | 3.313669 | hypothetical protein | |
Spea_0669 | -2 | 16 | 2.908957 | major facilitator transporter | |
Spea_0670 | -2 | 15 | 2.950354 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0664 | TCRTETOQM | 75 | 2e-16 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0667 | SACTRNSFRASE | 45 | 8e-09 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0669 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0670 | 56KDTSANTIGN | 30 | 0.022 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein |
66 | Spea_0844 | Spea_0849 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0844 | 0 | 15 | -1.175616 | extracellular solute-binding protein | |
Spea_0845 | -1 | 14 | -0.369815 | binding-protein-dependent transport system inner | |
Spea_0846 | 0 | 14 | -1.112445 | ABC transporter-like protein | |
Spea_0847 | 0 | 20 | -1.239285 | Dyp-type peroxidase family protein | |
Spea_0848 | 1 | 27 | -1.037333 | cupin | |
Spea_0849 | 1 | 29 | -0.971787 | arginine repressor |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0844 | adhesinmafb | 33 | 0.002 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0846 | PF05272 | 30 | 0.012 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0847 | AEROLYSIN | 30 | 0.009 | Aerolysin signature. | |
>AEROLYSIN#Aerolysin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0849 | ARGREPRESSOR | 148 | 6e-49 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. |
67 | Spea_0871 | Spea_0878 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0871 | -1 | 14 | 0.993695 | phosphoribosylglycinamide formyltransferase 2 | |
Spea_0872 | 1 | 18 | 0.211333 | hypothetical protein | |
Spea_0873 | 0 | 17 | -0.155266 | secretion protein HlyD family protein | |
Spea_0874 | 1 | 17 | -1.087863 | ATPase central domain-containing protein | |
Spea_0875 | 1 | 19 | -1.774707 | hypothetical protein | |
Spea_0876 | 0 | 17 | -1.581416 | hypothetical protein | |
Spea_0877 | 0 | 17 | -1.553163 | histidine kinase | |
Spea_0878 | 0 | 15 | -2.391981 | two component transcriptional regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0871 | PF06057 | 31 | 0.006 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0873 | RTXTOXIND | 48 | 3e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0877 | PF06580 | 32 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0878 | HTHFIS | 74 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
68 | Spea_0908 | Spea_0924 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_0908 | -2 | 10 | -0.271409 | response regulator receiver modulated | |
Spea_0909 | -2 | 8 | -0.382035 | Hpt sensor hybrid histidine kinase | |
Spea_0910 | 0 | 10 | 1.573331 | leucyl aminopeptidase | |
Spea_0911 | -1 | 13 | 1.621085 | YjgP/YjgQ family permease | |
Spea_0912 | -1 | 12 | 1.966159 | YjgP/YjgQ family permease | |
Spea_0913 | -1 | 12 | 1.932891 | RDD domain-containing protein | |
Spea_0914 | -2 | 12 | 1.668816 | hypothetical protein | |
Spea_0915 | -2 | 12 | 2.354983 | N-acetyltransferase GCN5 | |
Spea_0916 | -1 | 11 | 2.788428 | carboxypeptidase Taq | |
Spea_0917 | 0 | 12 | 2.518390 | peptidase S8/S53 subtilisin kexin sedolisin | |
Spea_0918 | 0 | 12 | 2.261879 | hypothetical protein | |
Spea_0919 | 0 | 10 | 1.973808 | DEAD/DEAH box helicase | |
Spea_0920 | 0 | 11 | 2.048854 | peptidase M24 | |
Spea_0921 | 0 | 14 | 1.454907 | major facilitator transporter | |
Spea_0922 | -1 | 13 | 0.669721 | peptidase M24 | |
Spea_0923 | -2 | 16 | 0.397677 | FKBP-type peptidylprolyl isomerase | |
Spea_0924 | -1 | 17 | 0.534403 | OmpA/MotB domain-containing protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0908 | HTHFIS | 56 | 8e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0909 | HTHFIS | 64 | 3e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0914 | VACCYTOTOXIN | 25 | 0.039 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0915 | SACTRNSFRASE | 31 | 0.001 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0917 | SUBTILISIN | 135 | 2e-37 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0919 | SECA | 29 | 0.037 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0921 | TCRTETB | 36 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0923 | INFPOTNTIATR | 141 | 7e-45 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_0924 | OMPADOMAIN | 201 | 3e-64 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. |
69 | Spea_1087 | Spea_1100 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1087 | 2 | 26 | -3.265758 | type IV pilus modification protein PilV | |
Spea_1088 | 2 | 26 | -3.537136 | type IV pilus assembly protein PilW | |
Spea_1089 | 3 | 24 | -3.446289 | type IV pilus assembly protein PilX | |
Spea_1090 | 3 | 23 | -3.609176 | type IV pilin biogenesis protein | |
Spea_1091 | 0 | 24 | -4.385602 | methylation site containing protein | |
Spea_1092 | 0 | 19 | -2.284270 | hypothetical protein | |
Spea_1093 | -1 | 16 | -1.608106 | type IV pilus biogenesis protein | |
Spea_1094 | -1 | 14 | -1.499535 | type IV pilus biogenesis protein | |
Spea_1095 | -1 | 11 | -0.753772 | nitrogen regulatory protein P-II | |
Spea_1096 | -1 | 11 | -0.331617 | LacI family transcriptional regulator | |
Spea_1097 | -1 | 10 | 0.280776 | TonB-dependent receptor | |
Spea_1098 | 0 | 10 | 0.322989 | tryptophan halogenase | |
Spea_1099 | 1 | 11 | 0.173411 | SapC family protein | |
Spea_1100 | 2 | 11 | 0.440550 | beta-N-acetylhexosaminidase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1087 | PilS_PF08805 | 28 | 0.027 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1091 | BCTERIALGSPG | 45 | 7e-09 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1093 | BCTERIALGSPH | 38 | 8e-06 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1094 | BCTERIALGSPG | 36 | 2e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1097 | ACRIFLAVINRP | 35 | 0.002 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1100 | DHBDHDRGNASE | 30 | 0.028 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
70 | Spea_1150 | Spea_1156 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1150 | -1 | 16 | 2.336597 | RND family efflux transporter MFP subunit | |
Spea_1151 | -2 | 17 | 2.583007 | hydrophobe/amphiphile efflux-1 (HAE1) family | |
Spea_1152 | -3 | 16 | 1.464010 | iron-containing alcohol dehydrogenase | |
Spea_1153 | -1 | 18 | 1.053502 | hypothetical protein | |
Spea_1154 | -1 | 17 | 1.628871 | hypothetical protein | |
Spea_1155 | -1 | 15 | 1.568032 | acriflavin resistance protein | |
Spea_1156 | 0 | 16 | 1.244602 | RND family efflux transporter MFP subunit |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1150 | RTXTOXIND | 32 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1151 | ACRIFLAVINRP | 994 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1155 | ACRIFLAVINRP | 774 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1156 | RTXTOXIND | 38 | 4e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
71 | Spea_1322 | Spea_1326 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1322 | -1 | 21 | 3.118777 | methyl-accepting chemotaxis sensory transducer | |
Spea_1323 | -2 | 21 | 3.025366 | hypothetical protein | |
Spea_1324 | -3 | 19 | 2.984303 | acriflavin resistance protein | |
Spea_1325 | -2 | 15 | 1.551105 | RND family efflux transporter MFP subunit | |
Spea_1326 | -1 | 11 | -0.015958 | TetR family transcriptional regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1322 | RTXTOXIND | 32 | 0.010 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1324 | ACRIFLAVINRP | 375 | e-115 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1325 | RTXTOXIND | 39 | 3e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1326 | HTHTETR | 76 | 3e-19 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
72 | Spea_1338 | Spea_1398 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1338 | 0 | 16 | -0.309655 | response regulator receiver modulated CheW | |
Spea_1339 | -1 | 15 | 1.099183 | CheR-type MCP methyltransferase | |
Spea_1340 | -1 | 15 | 1.211185 | flagellar basal body rod protein FlgB | |
Spea_1341 | -1 | 15 | 1.406516 | flagellar basal body rod protein FlgC | |
Spea_1342 | 0 | 17 | 1.873938 | flagellar basal body rod modification protein | |
Spea_1343 | 0 | 16 | 1.703492 | flagellar hook protein FlgE | |
Spea_1344 | 0 | 12 | 1.734854 | flagellar basal body rod protein FlgF | |
Spea_1345 | -1 | 12 | 1.219744 | flagellar basal body rod protein FlgG | |
Spea_1346 | 0 | 11 | 1.361427 | flagellar basal body L-ring protein | |
Spea_1347 | 0 | 11 | 1.275875 | flagellar basal body P-ring protein | |
Spea_1348 | 1 | 9 | 0.706693 | flagellar rod assembly protein/muramidase FlgJ | |
Spea_1349 | 1 | 10 | 0.415492 | flagellar hook-associated protein FlgK | |
Spea_1350 | 1 | 14 | -0.401652 | flagellar hook-associated protein FlgL | |
Spea_1351 | 1 | 20 | -0.743405 | flagellin domain-containing protein | |
Spea_1352 | 1 | 16 | -1.278240 | flagellin domain-containing protein | |
Spea_1353 | 0 | 13 | -1.310583 | flagellar protein FlaG protein | |
Spea_1354 | 0 | 12 | -0.273799 | flagellar hook-associated 2 domain-containing | |
Spea_1355 | -1 | 12 | -0.241831 | hypothetical protein | |
Spea_1356 | -1 | 11 | 0.647467 | flagellar protein FliS | |
Spea_1357 | -1 | 10 | 0.855893 | sigma-54 dependent trancsriptional regulator | |
Spea_1358 | -1 | 11 | 1.685286 | PAS/PAC sensor signal transduction histidine | |
Spea_1359 | -1 | 11 | 2.864457 | Fis family two component sigma54 specific | |
Spea_1360 | -1 | 13 | 3.004278 | flagellar hook-basal body complex subunit FliE | |
Spea_1361 | 2 | 11 | 2.951209 | flagellar MS-ring protein | |
Spea_1362 | 2 | 15 | 2.955495 | flagellar motor switch protein G | |
Spea_1363 | 1 | 14 | 3.028097 | flagellar assembly protein FliH | |
Spea_1364 | 0 | 14 | 2.777203 | flagellum-specific ATP synthase | |
Spea_1365 | 1 | 16 | 1.431887 | flagellar export protein FliJ | |
Spea_1366 | 1 | 13 | 0.605451 | flagellar hook-length control protein | |
Spea_1367 | 1 | 15 | -0.018359 | flagellar basal body-associated protein FliL | |
Spea_1368 | 2 | 17 | 0.401269 | flagellar motor switch protein FliM | |
Spea_1369 | 2 | 19 | 0.955743 | flagellar motor switch protein | |
Spea_1370 | 1 | 19 | 2.221072 | flagellar biosynthesis protein FliO | |
Spea_1371 | 1 | 16 | 1.531677 | flagellar biosynthesis protein FliP | |
Spea_1372 | 0 | 16 | 1.844293 | flagellar biosynthetic protein FliQ | |
Spea_1373 | 0 | 15 | 1.886524 | flagellar biosynthesis protein FliR | |
Spea_1374 | 0 | 15 | 1.647364 | flagellar biosynthesis protein FlhB | |
Spea_1375 | -1 | 14 | 0.825773 | flagellar biosynthesis protein FlhA | |
Spea_1376 | 0 | 15 | -0.311585 | flagellar biosynthesis regulator FlhF | |
Spea_1377 | 0 | 14 | 0.336319 | cobyrinic acid ac-diamide synthase | |
Spea_1378 | 0 | 15 | 0.014269 | flagellar biosynthesis sigma factor | |
Spea_1379 | -1 | 14 | -0.282864 | response regulator receiver protein | |
Spea_1380 | 0 | 15 | -0.263157 | chemotaxis phosphatase CheZ | |
Spea_1381 | -1 | 15 | -0.043771 | signal transduction histidine kinase CheA | |
Spea_1382 | 0 | 18 | -0.430343 | chemotaxis-specific methylesterase | |
Spea_1383 | 1 | 19 | -1.059083 | hypothetical protein | |
Spea_1384 | 1 | 16 | -2.086533 | cobyrinic acid ac-diamide synthase | |
Spea_1385 | 0 | 15 | -2.075812 | CheW protein | |
Spea_1386 | -1 | 13 | -2.740746 | CheW protein | |
Spea_1387 | -1 | 14 | -2.325816 | hypothetical protein | |
Spea_1388 | -1 | 13 | -2.391729 | FlhB domain-containing protein | |
Spea_1389 | -1 | 15 | -2.287881 | hypothetical protein | |
Spea_1390 | -2 | 17 | -1.970740 | VacJ family lipoprotein | |
Spea_1391 | -2 | 18 | -2.106463 | response regulator receiver protein | |
Spea_1393 | -2 | 21 | -2.396754 | amino acid/peptide transporter | |
Spea_1394 | -2 | 20 | -3.540366 | transcriptional acivator RfaH | |
Spea_1395 | -2 | 22 | -4.249523 | polysaccharide export protein | |
Spea_1396 | 0 | 31 | -7.463373 | hypothetical protein | |
Spea_1397 | 1 | 34 | -9.066545 | lipopolysaccharide biosynthesis protein | |
Spea_1398 | 2 | 38 | -10.576740 | dTDP-glucose-4,6-dehydratase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1338 | HTHFIS | 66 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1341 | FLGHOOKAP1 | 34 | 2e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1343 | FLGHOOKAP1 | 41 | 5e-06 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1344 | FLGHOOKAP1 | 29 | 0.020 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1345 | FLGHOOKAP1 | 46 | 6e-08 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1346 | FLGLRINGFLGH | 142 | 2e-44 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1347 | FLGPRINGFLGI | 383 | e-134 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1348 | FLGFLGJ | 199 | 2e-63 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1349 | FLGHOOKAP1 | 217 | 6e-65 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1350 | FLAGELLIN | 61 | 3e-12 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1351 | FLAGELLIN | 145 | 3e-41 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1352 | FLAGELLIN | 146 | 2e-41 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1354 | FLAGELLIN | 30 | 0.014 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1357 | HTHFIS | 440 | e-153 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1359 | HTHFIS | 461 | e-162 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1360 | FLGHOOKFLIE | 54 | 7e-13 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1361 | FLGMRINGFLIF | 301 | 3e-97 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1362 | FLGMOTORFLIG | 287 | 1e-97 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1363 | FLGFLIH | 77 | 1e-18 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1365 | FLGFLIJ | 41 | 3e-07 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1366 | FLGHOOKFLIK | 48 | 5e-08 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1368 | FLGMOTORFLIM | 249 | 5e-83 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1369 | FLGMOTORFLIN | 113 | 2e-35 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1371 | FLGBIOSNFLIP | 270 | 4e-94 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1372 | TYPE3IMQPROT | 43 | 4e-09 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1373 | TYPE3IMRPROT | 120 | 5e-35 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1374 | TYPE3IMSPROT | 339 | e-117 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1376 | PF05272 | 38 | 1e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1379 | HTHFIS | 88 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1381 | PF06580 | 44 | 2e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1382 | HTHFIS | 66 | 5e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1383 | INTIMIN | 29 | 0.019 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1388 | TYPE3IMSPROT | 66 | 3e-16 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1390 | VACJLIPOPROT | 225 | 5e-76 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1391 | HTHFIS | 96 | 5e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1396 | NUCEPIMERASE | 28 | 0.008 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1398 | NUCEPIMERASE | 179 | 1e-55 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
73 | Spea_1432 | Spea_1441 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1432 | -1 | 17 | -0.178124 | response regulator receiver modulated serine | |
Spea_1433 | -2 | 15 | 0.386882 | phosphonate ABC transporter periplasmic | |
Spea_1434 | -1 | 15 | 0.544985 | multi-sensor hybrid histidine kinase | |
Spea_1435 | 0 | 13 | 1.136150 | Fis family two component sigma54 specific | |
Spea_1436 | 1 | 13 | 1.371961 | putative hydrolase | |
Spea_1437 | 0 | 14 | 1.459723 | dTDP-4-dehydrorhamnose reductase | |
Spea_1438 | 1 | 15 | 1.511728 | hypothetical protein | |
Spea_1439 | 0 | 21 | 0.884994 | glycoside hydrolase family 3 | |
Spea_1440 | 0 | 19 | 0.614302 | 3'(2'),5'-bisphosphate nucleotidase | |
Spea_1441 | -2 | 14 | 0.473495 | fructokinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1432 | HTHFIS | 83 | 2e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1434 | HTHFIS | 81 | 9e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1435 | HTHFIS | 490 | e-173 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1437 | NUCEPIMERASE | 52 | 9e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1441 | ACETATEKNASE | 30 | 0.013 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. |
74 | Spea_1561 | Spea_1564 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1561 | -2 | 17 | 1.549205 | TetR family transcriptional regulator | |
Spea_1562 | -2 | 18 | 1.995004 | RND family efflux transporter MFP subunit | |
Spea_1563 | 0 | 16 | 1.120144 | acriflavin resistance protein | |
Spea_1564 | -1 | 14 | -1.683738 | purine phosphorylase family 1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1561 | HTHTETR | 60 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1562 | RTXTOXIND | 54 | 5e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1563 | ACRIFLAVINRP | 447 | e-142 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1564 | ANTHRAXTOXNA | 28 | 0.048 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. |
75 | Spea_1681 | Spea_1688 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1681 | -2 | 11 | -0.760536 | TetR family transcriptional regulator | |
Spea_1682 | 0 | 10 | -0.089622 | cysteine synthase A | |
Spea_1683 | 0 | 11 | -0.270868 | RDD domain-containing protein | |
Spea_1684 | 0 | 11 | 0.562366 | response regulator receiver modulated | |
Spea_1685 | -1 | 11 | 0.762278 | hypothetical protein | |
Spea_1686 | 0 | 10 | 0.546108 | putative sulfate transport protein CysZ | |
Spea_1687 | 0 | 10 | 0.508734 | chromosome segregation protein SMC | |
Spea_1688 | -1 | 11 | 0.309266 | cell division protein ZipA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1681 | HTHTETR | 42 | 6e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1684 | HTHFIS | 65 | 2e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1687 | RTXTOXIND | 48 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1688 | TONBPROTEIN | 33 | 0.001 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. |
76 | Spea_1729 | Spea_1736 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1729 | 1 | 16 | 0.908081 | acriflavin resistance protein | |
Spea_1730 | 0 | 14 | -0.682173 | RND family efflux transporter MFP subunit | |
Spea_1731 | 1 | 15 | -1.287742 | hypothetical protein | |
Spea_1732 | 0 | 14 | -0.872076 | radical SAM domain-containing protein | |
Spea_1733 | 0 | 14 | -0.335210 | two component LuxR family transcriptional | |
Spea_1734 | 0 | 15 | 0.844534 | histidine kinase | |
Spea_1735 | 0 | 17 | 1.680236 | sulfatase | |
Spea_1736 | 1 | 21 | 1.704227 | ATPase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1729 | ACRIFLAVINRP | 428 | e-135 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1730 | RTXTOXIND | 36 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1733 | HTHFIS | 55 | 4e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1734 | PF06580 | 31 | 0.010 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1736 | HTHFIS | 34 | 0.001 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
77 | Spea_1776 | Spea_1785 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_1776 | -2 | 14 | 0.135838 | sigma-54 dependent trancsriptional regulator | |
Spea_1777 | -2 | 12 | 0.264649 | hypothetical protein | |
Spea_1778 | -2 | 13 | 0.175160 | hypothetical protein | |
Spea_1779 | -1 | 15 | 1.209673 | acriflavin resistance protein | |
Spea_1780 | -1 | 15 | 0.601249 | acriflavin resistance protein | |
Spea_1781 | 1 | 24 | 0.465287 | RND family efflux transporter MFP subunit | |
Spea_1782 | 3 | 26 | 0.558197 | citrate synthase I | |
Spea_1783 | 3 | 21 | 1.065155 | type II citrate synthase | |
Spea_1784 | 3 | 22 | 1.265968 | succinate dehydrogenase cytochrome b556 subunit | |
Spea_1785 | 3 | 24 | 1.152449 | succinate dehydrogenase hydrophobic membrane |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1776 | HTHFIS | 365 | e-125 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1779 | ACRIFLAVINRP | 487 | e-157 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1780 | ACRIFLAVINRP | 648 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1781 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_1785 | TYPE3OMOPROT | 28 | 0.009 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein |
78 | Spea_2173 | Spea_2183 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2173 | -1 | 11 | -0.715047 | short-chain dehydrogenase/reductase SDR | |
Spea_2174 | -1 | 11 | -0.700924 | nuclear transport factor 2 | |
Spea_2175 | -2 | 10 | -0.702601 | acyl-CoA dehydrogenase domain-containing | |
Spea_2176 | -2 | 9 | -0.420789 | acyl-CoA dehydrogenase domain-containing | |
Spea_2177 | -1 | 8 | -0.380295 | acriflavin resistance protein | |
Spea_2178 | -1 | 11 | -0.890802 | RND family efflux transporter MFP subunit | |
Spea_2179 | -1 | 11 | -1.349208 | SecC motif-containing protein | |
Spea_2180 | -1 | 10 | -1.470137 | putative manganese-dependent inorganic | |
Spea_2181 | -1 | 8 | -2.006892 | putative ATP-dependent protease La-likeprotein | |
Spea_2182 | -1 | 10 | -2.200544 | peptidase U32 | |
Spea_2183 | -2 | 11 | -2.296816 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2173 | DHBDHDRGNASE | 122 | 8e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2177 | ACRIFLAVINRP | 430 | e-136 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2178 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2179 | SECA | 53 | 2e-11 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2181 | IGASERPTASE | 30 | 0.035 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2183 | FbpA_PF05833 | 29 | 0.039 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein |
79 | Spea_2190 | Spea_2193 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2190 | 0 | 15 | 1.007596 | EmrB/QacA family drug resistance transporter | |
Spea_2191 | 0 | 16 | 0.767610 | secretion protein HlyD family protein | |
Spea_2192 | -1 | 15 | -1.650231 | RND family efflux transporter MFP subunit | |
Spea_2193 | -1 | 15 | -1.704617 | hydrophobe/amphiphile efflux-1 (HAE1) family |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2190 | TCRTETB | 94 | 1e-22 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2191 | RTXTOXIND | 69 | 3e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2192 | RTXTOXIND | 42 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2193 | ACRIFLAVINRP | 941 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
80 | Spea_2271 | Spea_2279 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2271 | 1 | 14 | -2.520792 | hypothetical protein | |
Spea_2272 | 0 | 15 | -2.714105 | pentapeptide repeat-containing protein | |
Spea_2273 | 1 | 16 | -4.741189 | hypothetical protein | |
Spea_2274 | 0 | 14 | -3.933247 | N-acetyltransferase GCN5 | |
Spea_2275 | 1 | 13 | -3.389622 | hypothetical protein | |
Spea_2276 | 0 | 12 | -2.206962 | radical SAM domain-containing protein | |
Spea_2277 | 0 | 16 | -4.010989 | peptidase S15 | |
Spea_2278 | 1 | 16 | -1.645167 | hypothetical protein | |
Spea_2279 | 0 | 15 | -2.145256 | ******major facilitator transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2271 | TCRTETB | 37 | 1e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2272 | cloacin | 40 | 2e-05 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2274 | SACTRNSFRASE | 52 | 3e-11 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2276 | SECA | 33 | 0.005 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2279 | TCRTETA | 61 | 2e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
81 | Spea_2517 | Spea_2523 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2517 | 0 | 14 | 1.652108 | OmpA/MotB domain-containing protein | |
Spea_2518 | 0 | 13 | 1.824170 | two component transcriptional regulator | |
Spea_2519 | -1 | 13 | 1.526630 | histidine kinase | |
Spea_2520 | -1 | 13 | 0.898270 | cystathionine beta-lyase | |
Spea_2521 | -1 | 13 | 0.702507 | hypothetical protein | |
Spea_2522 | -2 | 14 | 0.633065 | CreA family protein | |
Spea_2523 | -2 | 14 | 0.783958 | putative chaperone |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2517 | OMPADOMAIN | 72 | 6e-17 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2518 | HTHFIS | 67 | 5e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2521 | BCTERIALGSPG | 44 | 5e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2523 | SHAPEPROTEIN | 47 | 6e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
82 | Spea_2669 | Spea_2680 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2669 | 0 | 13 | 0.126880 | phage shock protein A | |
Spea_2670 | 0 | 12 | -0.113707 | Fis family transcriptional regulator | |
Spea_2671 | -2 | 10 | -0.213183 | extracellular solute-binding protein | |
Spea_2672 | -1 | 14 | -0.446640 | binding-protein-dependent transport system inner | |
Spea_2673 | 0 | 18 | -0.221042 | binding-protein-dependent transport system inner | |
Spea_2674 | 1 | 18 | -0.426748 | oligopeptide/dipeptide ABC transporter ATPase | |
Spea_2675 | 2 | 21 | -0.855417 | ABC transporter-like protein | |
Spea_2676 | 3 | 22 | -0.538447 | trans-2-enoyl-CoA reductase | |
Spea_2677 | 5 | 27 | -0.721513 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
Spea_2678 | 4 | 24 | -0.393756 | histone family protein DNA-binding protein | |
Spea_2679 | 3 | 21 | -0.325969 | ATP-dependent protease La | |
Spea_2680 | 3 | 26 | -0.636144 | ATP-dependent protease ATP-binding subunit ClpX |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2669 | RTXTOXIND | 29 | 0.013 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2670 | HTHFIS | 349 | e-119 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2674 | HTHFIS | 31 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2675 | PF05272 | 30 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2678 | DNABINDINGHU | 117 | 2e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2679 | HTHFIS | 35 | 0.001 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2680 | HTHFIS | 31 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
83 | Spea_2703 | Spea_2708 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2703 | -1 | 14 | -0.155377 | transcriptional regulator CdaR | |
Spea_2704 | -1 | 15 | -0.557862 | type IV pilin | |
Spea_2705 | -1 | 16 | -0.324070 | OmpA/MotB domain-containing protein | |
Spea_2706 | -1 | 14 | -0.994755 | hypothetical protein | |
Spea_2707 | -1 | 13 | -1.500524 | hypothetical protein | |
Spea_2708 | -2 | 11 | -0.903664 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2703 | HTHFIS | 31 | 0.006 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2704 | BCTERIALGSPG | 44 | 3e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2705 | OMPADOMAIN | 141 | 1e-41 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2706 | RTXTOXIND | 31 | 0.011 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2708 | PF00577 | 60 | 4e-11 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD |
84 | Spea_2961 | Spea_2970 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_2961 | -2 | 11 | -1.609966 | diguanylate cyclase | |
Spea_2962 | -1 | 13 | -0.585713 | hypothetical protein | |
Spea_2963 | -2 | 11 | -0.235441 | putative lipoprotein | |
Spea_2964 | -3 | 11 | -0.008506 | glutathione peroxidase | |
Spea_2965 | -3 | 12 | -0.157746 | peptidase M1 membrane alanine aminopeptidase | |
Spea_2966 | -1 | 17 | -0.403813 | collagenase | |
Spea_2967 | 0 | 15 | -0.324643 | phosphate-binding protein | |
Spea_2968 | -1 | 10 | -1.174216 | PAS/PAC sensor signal transduction histidine | |
Spea_2969 | 1 | 12 | -2.207411 | two component transcriptional regulator | |
Spea_2970 | 1 | 12 | -2.212713 | porin |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2961 | PF04647 | 31 | 0.011 | Accessory gene regulator B | |
>PF04647#Accessory gene regulator B | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2964 | PF03627 | 28 | 0.019 | PapG | |
>PF03627#PapG | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2966 | MICOLLPTASE | 171 | 4e-50 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2968 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2969 | HTHFIS | 92 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_2970 | ECOLNEIPORIN | 66 | 3e-14 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. |
85 | Spea_3049 | Spea_3055 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3049 | 0 | 25 | -1.378365 | nucleoside-specific channel-forming protein Tsx | |
Spea_3050 | 1 | 31 | -1.329966 | nucleoside transporter | |
Spea_3051 | 1 | 21 | -1.306659 | TatD-like deoxyribonuclease | |
Spea_3052 | 2 | 25 | -1.001888 | hypothetical protein | |
Spea_3053 | 2 | 24 | -0.889606 | peptide chain release factor 3 | |
Spea_3054 | 3 | 23 | -1.047854 | lipoprotein NlpI | |
Spea_3055 | 4 | 34 | -0.561480 | polynucleotide phosphorylase/polyadenylase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3049 | CHANNELTSX | 76 | 4e-18 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3052 | BINARYTOXINB | 26 | 0.026 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3053 | TCRTETOQM | 203 | 2e-60 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3055 | RTXTOXIND | 33 | 0.004 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
86 | Spea_3060 | Spea_3071 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3060 | 3 | 32 | 0.145173 | translation initiation factor IF-2 | |
Spea_3061 | 1 | 21 | -0.111290 | transcription elongation factor NusA | |
Spea_3062 | 1 | 18 | 0.228686 | hypothetical protein | |
Spea_3063 | 1 | 17 | 0.603592 | **preprotein translocase subunit SecG | |
Spea_3064 | 1 | 16 | 0.546728 | triosephosphate isomerase | |
Spea_3065 | 0 | 15 | 0.525107 | phosphoglucosamine mutase | |
Spea_3066 | -1 | 13 | 0.469734 | dihydropteroate synthase | |
Spea_3067 | -1 | 12 | 0.534506 | ATP-dependent metalloprotease FtsH | |
Spea_3068 | -2 | 12 | 0.095431 | 23S rRNA methyltransferase J | |
Spea_3069 | 0 | 17 | 0.587674 | hypothetical protein | |
Spea_3070 | 1 | 17 | 0.467082 | protein-export membrane protein SecF | |
Spea_3071 | 1 | 18 | 0.790073 | preprotein translocase subunit SecD |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3060 | TCRTETOQM | 74 | 2e-15 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3063 | SECGEXPORT | 122 | 8e-40 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3064 | adhesinb | 33 | 0.001 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3067 | HTHFIS | 36 | 5e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3070 | SECFTRNLCASE | 234 | 8e-78 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3071 | SECFTRNLCASE | 83 | 2e-19 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. |
87 | Spea_3353 | Spea_3368 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3353 | 0 | 18 | 1.065027 | hypothetical protein | |
Spea_3354 | 0 | 16 | 0.184617 | UspA domain-containing protein | |
Spea_3355 | -1 | 15 | 1.122012 | UspA domain-containing protein | |
Spea_3356 | -2 | 15 | 1.039736 | hypothetical protein | |
Spea_3357 | -2 | 16 | 1.071811 | aldehyde dehydrogenase | |
Spea_3358 | -2 | 18 | 1.111212 | TetR family transcriptional regulator | |
Spea_3360 | -2 | 18 | 1.947112 | PAS/PAC sensor signal transduction histidine | |
Spea_3361 | -3 | 17 | 2.484326 | Fis family two component sigma54 specific | |
Spea_3362 | -2 | 17 | 1.767701 | hypothetical protein | |
Spea_3363 | -2 | 15 | 2.626302 | hypothetical protein | |
Spea_3364 | -1 | 16 | 2.757066 | ABC transporter-like protein | |
Spea_3365 | -1 | 17 | 2.785337 | RND family efflux transporter MFP subunit | |
Spea_3366 | 0 | 18 | 2.431835 | porin | |
Spea_3367 | 0 | 19 | 2.167545 | response regulator receiver protein | |
Spea_3368 | 0 | 21 | 2.304951 | flavocytochrome c |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3353 | BONTOXILYSIN | 28 | 0.039 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3355 | SHAPEPROTEIN | 26 | 0.046 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3358 | HTHTETR | 67 | 4e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3361 | HTHFIS | 425 | e-147 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3365 | RTXTOXIND | 41 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3366 | ECOLIPORIN | 92 | 1e-22 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3367 | HTHFIS | 366 | e-124 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3368 | BICOMPNTOXIN | 29 | 0.036 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. |
88 | Spea_3577 | Spea_3582 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3577 | -1 | 9 | 0.928796 | two component transcriptional regulator | |
Spea_3578 | -1 | 11 | 0.755909 | LuxR family transcriptional regulator | |
Spea_3579 | 0 | 13 | 1.325729 | hypothetical protein | |
Spea_3580 | 0 | 15 | 1.031013 | alanine racemase | |
Spea_3581 | 2 | 21 | 0.712258 | replicative DNA helicase | |
Spea_3582 | 4 | 22 | 0.251245 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3577 | HTHFIS | 77 | 1e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3578 | PF06580 | 29 | 0.025 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3580 | ALARACEMASE | 436 | e-156 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3582 | V8PROTEASE | 48 | 7e-08 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. |
89 | Spea_3691 | Spea_3696 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3691 | -1 | 28 | 4.509451 | MATE efflux family protein | |
Spea_3692 | 0 | 25 | 3.779100 | pentapeptide repeat-containing protein | |
Spea_3693 | 0 | 24 | 3.506070 | hypothetical protein | |
Spea_3694 | -1 | 24 | 3.244051 | LysR family transcriptional regulator | |
Spea_3695 | -1 | 23 | 3.052073 | RND family efflux transporter MFP subunit | |
Spea_3696 | 0 | 21 | 3.565915 | acriflavin resistance protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3691 | SECFTRNLCASE | 30 | 0.015 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3692 | NUCEPIMERASE | 31 | 0.003 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3695 | RTXTOXIND | 48 | 4e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3696 | ACRIFLAVINRP | 488 | e-158 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
90 | Spea_3740 | Spea_3745 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3740 | 0 | 11 | 1.755706 | peptidase U62 modulator of DNA gyrase | |
Spea_3741 | 0 | 13 | 2.214810 | hypothetical protein | |
Spea_3742 | 0 | 13 | 3.177163 | Ig domain-containing protein | |
Spea_3743 | 2 | 19 | 4.247998 | ABC-2 type transporter | |
Spea_3744 | 0 | 19 | 4.037866 | ABC-2 type transporter | |
Spea_3745 | 1 | 18 | 3.831951 | secretion protein HlyD family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3740 | FRAGILYSIN | 30 | 0.019 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3741 | BCTERIALGSPD | 27 | 0.043 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3742 | INTIMIN | 39 | 8e-05 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3745 | RTXTOXIND | 41 | 6e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
91 | Spea_3754 | Spea_3771 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3754 | 0 | 13 | 1.463376 | rod shape-determining protein MreB | |
Spea_3755 | -1 | 14 | 0.857683 | PA14 domain-containing protein | |
Spea_3756 | 0 | 17 | 0.352063 | MSHA biogenesis protein MshP | |
Spea_3757 | 0 | 15 | -0.000448 | methylation site containing protein | |
Spea_3758 | 1 | 16 | -0.620099 | methylation site containing protein | |
Spea_3759 | -2 | 14 | -0.073696 | MSHA pilin protein MshC | |
Spea_3760 | 1 | 12 | 0.595162 | methylation site containing protein | |
Spea_3761 | -1 | 14 | 1.239469 | MSHA pilin protein MshA | |
Spea_3762 | 0 | 16 | 1.772491 | methylation site containing protein | |
Spea_3763 | 0 | 15 | 1.932033 | hypothetical protein | |
Spea_3764 | 0 | 16 | 1.707231 | type II secretion system protein | |
Spea_3765 | 1 | 16 | 1.123159 | type II secretion system protein E | |
Spea_3766 | 2 | 18 | 0.336319 | hypothetical protein | |
Spea_3767 | 0 | 15 | -0.383769 | MSHA biogenesis protein MshM | |
Spea_3768 | 0 | 15 | -0.760823 | pilus (MSHA type) biogenesis protein MshL | |
Spea_3769 | -1 | 15 | -1.277772 | hypothetical protein | |
Spea_3770 | 0 | 14 | -1.266387 | MSHA biogenesis protein MshJ | |
Spea_3771 | -1 | 13 | -1.047163 | fimbrial assembly family protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3754 | SHAPEPROTEIN | 551 | 0.0 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3755 | BINARYTOXINB | 34 | 0.007 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3757 | BCTERIALGSPG | 34 | 3e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3758 | BCTERIALGSPH | 30 | 0.004 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3759 | BCTERIALGSPG | 44 | 2e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3760 | BCTERIALGSPG | 50 | 2e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3761 | BCTERIALGSPG | 47 | 2e-09 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3762 | BCTERIALGSPG | 43 | 1e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3764 | BCTERIALGSPF | 298 | e-100 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3766 | SYCDCHAPRONE | 35 | 2e-04 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3768 | BCTERIALGSPD | 170 | 1e-47 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3771 | SECFTRNLCASE | 30 | 0.005 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. |
92 | Spea_3796 | Spea_3808 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3796 | 0 | 14 | -1.809301 | twin-arginine translocation protein subunit | |
Spea_3797 | 0 | 15 | -1.485042 | Sec-independent protein translocase subunit | |
Spea_3798 | 1 | 15 | -1.408621 | hypothetical protein | |
Spea_3799 | 0 | 15 | -1.349298 | TatD-like deoxyribonuclease | |
Spea_3800 | 0 | 17 | -1.563932 | diguanylate cyclase | |
Spea_3801 | 1 | 23 | -0.433556 | delta-aminolevulinic acid dehydratase | |
Spea_3803 | 2 | 21 | 0.039548 | **preprotein translocase subunit SecA | |
Spea_3804 | 0 | 15 | 0.502021 | peptidase M23B | |
Spea_3805 | 1 | 15 | 1.320174 | hypothetical protein | |
Spea_3806 | 1 | 13 | 1.791894 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine | |
Spea_3807 | 0 | 14 | 2.290545 | cell division protein FtsZ | |
Spea_3808 | 0 | 15 | 2.537789 | cell division protein FtsA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3796 | TATBPROTEIN | 106 | 3e-32 | Bacterial sec-independent translocation TatB protein... | |
>TATBPROTEIN#Bacterial sec-independent translocation TatB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3800 | GPOSANCHOR | 31 | 0.015 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3803 | SECA | 1324 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3804 | PF06580 | 33 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3808 | SHAPEPROTEIN | 61 | 1e-12 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
93 | Spea_3866 | Spea_3872 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3866 | 1 | 15 | 2.860671 | TetR family transcriptional regulator | |
Spea_3867 | 2 | 14 | 3.114797 | OPT family oligopeptide transporter | |
Spea_3868 | 2 | 16 | 2.911209 | OmpA/MotB domain-containing protein | |
Spea_3869 | 2 | 16 | 2.963071 | outer membrane adhesin-like protein | |
Spea_3870 | 0 | 19 | 2.106781 | hypothetical protein | |
Spea_3871 | 0 | 18 | 2.469419 | pyridoxal-dependent decarboxylase | |
Spea_3872 | 0 | 19 | 2.211330 | amidohydrolase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3866 | HTHTETR | 67 | 1e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3868 | OMPADOMAIN | 122 | 1e-33 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3869 | CHLAMIDIAOM6 | 32 | 0.044 | Chlamydia cysteine-rich outer membrane protein 6 si... | |
>CHLAMIDIAOM6#Chlamydia cysteine-rich outer membrane protein 6 | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3872 | UREASE | 33 | 0.002 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. |
94 | Spea_3929 | Spea_3941 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3929 | 0 | 20 | 3.695452 | signal transduction histidine kinase, nitrogen | |
Spea_3930 | 1 | 20 | 4.119213 | nitrogen metabolism transcriptional regulator | |
Spea_3931 | 1 | 19 | 2.970556 | cation diffusion facilitator family transporter | |
Spea_3932 | 0 | 14 | 1.532513 | hypothetical protein | |
Spea_3933 | 0 | 15 | 1.396851 | two component transcriptional regulator | |
Spea_3934 | -1 | 15 | 1.407838 | histidine kinase | |
Spea_3935 | 0 | 14 | 1.250944 | regulatory protein TetR | |
Spea_3936 | 1 | 15 | 1.413035 | LysR family transcriptional regulator | |
Spea_3937 | 0 | 17 | 2.247074 | hypothetical protein | |
Spea_3938 | -1 | 17 | 3.147323 | tetraheme cytochrome c | |
Spea_3939 | -1 | 18 | 3.424301 | flavocytochrome c | |
Spea_3940 | -2 | 21 | 3.784861 | LysR family transcriptional regulator | |
Spea_3941 | -2 | 22 | 3.850275 | quinone oxidoreductase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3929 | PF06580 | 45 | 2e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3930 | HTHFIS | 569 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3933 | HTHFIS | 98 | 6e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3934 | PF06580 | 37 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3935 | HTHTETR | 38 | 7e-06 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3939 | HTHFIS | 31 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3941 | NUCEPIMERASE | 29 | 0.017 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
95 | Spea_3988 | Spea_3994 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_3988 | 0 | 23 | 3.836377 | RND family efflux transporter MFP subunit | |
Spea_3989 | 1 | 22 | 3.084413 | CzcA family heavy metal efflux protein | |
Spea_3990 | 1 | 21 | 1.763111 | glyoxalase/bleomycin resistance | |
Spea_3991 | -1 | 18 | 1.185868 | diguanylate cyclase | |
Spea_3992 | -1 | 17 | 1.581963 | secretion protein HlyD family protein | |
Spea_3993 | -2 | 13 | 1.249005 | major facilitator superfamily permease | |
Spea_3994 | -2 | 10 | 1.299113 | AraC family transcriptional regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3988 | RTXTOXIND | 42 | 5e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3989 | ACRIFLAVINRP | 682 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3992 | RTXTOXIND | 49 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_3994 | HTHFIS | 30 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
96 | Spea_4107 | Spea_4113 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_4107 | 0 | 19 | 0.625150 | phosphopantetheine adenylyltransferase | |
Spea_4108 | -1 | 19 | 1.765548 | pseudouridine synthase Rlu family protein | |
Spea_4109 | -1 | 20 | 2.027968 | histidine kinase | |
Spea_4110 | -1 | 19 | 1.965163 | two component transcriptional regulator | |
Spea_4111 | 0 | 20 | 2.534716 | hypothetical protein | |
Spea_4112 | 0 | 19 | 3.343941 | hypothetical protein | |
Spea_4113 | 0 | 19 | 3.391299 | ABC transporter-like protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4107 | LPSBIOSNTHSS | 223 | 5e-78 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4109 | PF06580 | 31 | 0.010 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4110 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4113 | PF05272 | 33 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
97 | Spea_4201 | Spea_4206 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
Spea_4201 | 0 | 22 | 4.014359 | ABC-2 type transporter | |
Spea_4202 | 0 | 22 | 3.865133 | ABC transporter-like protein | |
Spea_4203 | 0 | 18 | 3.261023 | hypothetical protein | |
Spea_4204 | 0 | 17 | 2.784764 | outer membrane protein | |
Spea_4205 | 0 | 17 | 2.759505 | TolC family type I secretion outer membrane | |
Spea_4206 | 0 | 18 | 2.545930 | HlyD family type I secretion membrane fusion |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4201 | ABC2TRNSPORT | 45 | 2e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4203 | RTXTOXIND | 49 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4204 | OMPADOMAIN | 50 | 9e-10 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
Spea_4206 | RTXTOXIND | 253 | 1e-81 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |