| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | SFV_0050 | SFV_0059 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0050 | -2 | 17 | 3.522776 | 23S rRNA/tRNA pseudouridine synthase A | |
| SFV_0051 | -2 | 17 | 3.336816 | ATP-dependent helicase HepA | |
| SFV_0052 | -1 | 15 | 3.425680 | DNA polymerase II | |
| SFV_0053 | -1 | 15 | 3.645580 | L-ribulose-5-phosphate 4-epimerase | |
| SFV_0054 | -1 | 16 | 4.323744 | L-arabinose isomerase | |
| SFV_0055 | 0 | 17 | 4.029880 | ribulokinase | |
| SFV_0056 | 0 | 17 | 3.335737 | DNA-binding transcriptional regulator AraC | |
| SFV_0057 | 1 | 17 | 3.433127 | hypothetical protein | |
| SFV_0058 | 0 | 17 | 3.508402 | thiamine transporter ATP-binding subunit | |
| SFV_0059 | 0 | 18 | 3.341370 | thiamine transporter membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0055 | TCRTETOQM | 31 | 0.012 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0059 | PF06580 | 32 | 0.007 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 2 | SFV_0093 | SFV_0105 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0093 | 2 | 11 | 0.049083 | zinc-binding protein | |
| SFV_0094 | 1 | 13 | 0.281754 | hypothetical protein | |
| SFV_0095 | 0 | 14 | 0.627578 | dephospho-CoA kinase | |
| SFV_0096 | -1 | 14 | 0.582975 | guanosine 5'-monophosphate oxidoreductase | |
| SFV_0097 | 0 | 13 | 0.759098 | type IV pilin biogenesis protein | |
| SFV_0099 | -2 | 11 | 1.324973 | major pilin subunit | |
| SFV_0100 | 0 | 18 | 1.294949 | quinolinate phosphoribosyltransferase | |
| SFV_0101 | 2 | 26 | 1.573818 | N-acetyl-anhydromuranmyl-L-alanine amidase | |
| SFV_0102 | 3 | 32 | 1.400553 | regulatory protein AmpE | |
| SFV_0103 | 2 | 29 | 1.664808 | aromatic amino acid transporter | |
| SFV_0104 | 3 | 32 | 2.271738 | transcriptional regulator PdhR | |
| SFV_0105 | 3 | 33 | 2.125827 | pyruvate dehydrogenase subunit E1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0097 | BCTERIALGSPF | 226 | 1e-72 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0099 | BCTERIALGSPG | 50 | 2e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 3 | SFV_0128 | SFV_0138 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0128 | 0 | 14 | 3.007390 | poly(A) polymerase | |
| SFV_0129 | -1 | 14 | 2.879026 | glutamyl-Q tRNA(Asp) synthetase | |
| SFV_0130 | 0 | 11 | 2.117286 | RNA polymerase-binding transcription factor | |
| SFV_0131 | -1 | 12 | 2.351509 | sugar fermentation stimulation protein A | |
| SFV_0133 | -1 | 13 | 2.724663 | hypothetical protein | |
| SFV_0132 | -1 | 15 | 3.513555 | ATP-dependent RNA helicase HrpB | |
| SFV_0134 | -2 | 16 | 3.154926 | penicillin-binding protein 1b | |
| SFV_0135 | -1 | 14 | 2.971298 | ferrichrome outer membrane transporter | |
| SFV_0136 | 0 | 16 | 4.000938 | iron-hydroxamate transporter ATP-binding | |
| SFV_0137 | 1 | 14 | 3.757015 | iron-hydroxamate transporter substrate-binding | |
| SFV_0138 | 0 | 14 | 3.589617 | iron-hydroxamate transporter permease subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0137 | FERRIBNDNGPP | 508 | 0.0 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 4 | SFV_0194 | SFV_0278 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0194 | -1 | 23 | -3.219633 | biotin synthesis protein | |
| SFV_0195 | -2 | 17 | -1.120196 | membrane-bound lytic murein transglycosylase D | |
| SFV_0196 | -2 | 17 | -0.415437 | hydroxyacylglutathione hydrolase | |
| SFV_0197 | -2 | 12 | 2.621645 | hypothetical protein | |
| SFV_0199 | -1 | 16 | 3.802584 | ribonuclease H | |
| SFV_0198 | 0 | 20 | 5.346457 | DNA polymerase III subunit epsilon | |
| SFV_0201 | 2 | 22 | 5.857291 | *cytoplasmic protein | |
| SFV_0202 | 2 | 23 | 4.460006 | hypothetical protein | |
| SFV_0203 | 1 | 21 | 3.445768 | periplasmic chaperone of fimbral assembly | |
| SFV_0205 | 3 | 22 | 1.232463 | cytoplasmic protein | |
| SFV_0206 | 5 | 23 | 0.682576 | cytoplasmic protein | |
| SFV_0207 | 4 | 25 | -0.921669 | cytoplasmic protein | |
| SFV_0208 | 2 | 26 | -0.877062 | insertion sequence 2 OrfA protein | |
| SFV_0209 | 3 | 26 | -1.076757 | IS2 ORF2 | |
| SFV_0210 | 5 | 27 | -2.527254 | hypothetical protein | |
| SFV_0211 | 4 | 28 | -2.032780 | endopeptidase | |
| SFV_0212 | 4 | 29 | -2.838467 | lysozyme | |
| SFV_0213 | 5 | 28 | -2.408015 | hypothetical protein | |
| SFV_0214 | 4 | 28 | -1.951743 | hypothetical protein | |
| SFV_0215 | 4 | 29 | -1.555073 | hypothetical protein | |
| SFV_0216 | 4 | 28 | -0.834402 | hypothetical protein | |
| SFV_0217 | 4 | 27 | -0.534920 | IS911 ORF1 | |
| SFV_0218 | 5 | 28 | -0.384428 | IS911 ORF2 | |
| SFV_0219 | 5 | 29 | -0.737110 | terminase large subunit | |
| SFV_0220 | 5 | 26 | -0.806954 | packaging glycoprotein | |
| SFV_0221 | 4 | 26 | -0.794685 | scaffolding protein | |
| SFV_0222 | 4 | 26 | -1.219263 | coat protein | |
| SFV_0223 | 3 | 26 | -1.400473 | hypothetical protein | |
| SFV_0224 | 3 | 27 | -1.099447 | DNA stabilization protein | |
| SFV_0225 | 4 | 29 | -0.983397 | packaged DNA stabilization protein | |
| SFV_0226 | 3 | 29 | -0.696477 | packaged DNA stabilization protein | |
| SFV_0227 | 2 | 27 | -0.236207 | head assembly protein | |
| SFV_0228 | 3 | 28 | -0.156278 | DNA transfer protein | |
| SFV_0229 | 1 | 28 | -0.408951 | prophage DNA injection protein | |
| SFV_0230 | 3 | 26 | -0.415865 | DNA transfer protein | |
| SFV_0231 | 3 | 18 | 0.677576 | IS629 ORF1 | |
| SFV_0232 | 3 | 23 | 1.318268 | IS629 ORF2 | |
| SFV_0233 | 4 | 24 | 1.491030 | IS600 ORF2 | |
| SFV_0234 | 2 | 23 | 2.025413 | IS600 ORF1 | |
| SFV_0235 | 2 | 26 | 2.605585 | terminase | |
| SFV_0236 | 2 | 25 | 2.892358 | hypothetical protein | |
| SFV_0237 | 2 | 27 | 3.060157 | portal protein | |
| SFV_0238 | 1 | 24 | 3.391462 | prohead protease | |
| SFV_0239 | 0 | 22 | 3.138560 | bacteriophage protein | |
| SFV_0240 | -1 | 25 | 4.379674 | bacteriophage protein | |
| SFV_0241 | 1 | 23 | 4.160821 | bacteriophage protein | |
| SFV_0242 | 1 | 24 | 4.253648 | bacteriophage protein | |
| SFV_0243 | 0 | 22 | 2.302940 | bacteriophage protein | |
| SFV_0244 | 1 | 20 | 2.531323 | bacteriophage protein | |
| SFV_0245 | 1 | 21 | 3.250624 | sheath protein | |
| SFV_0246 | 2 | 23 | 2.864840 | hypothetical protein | |
| SFV_0247 | 2 | 22 | 3.194907 | bacteriophage protein | |
| SFV_0248 | 3 | 22 | 3.613023 | tail protein | |
| SFV_0249 | 5 | 22 | 5.326011 | tail/DNA circulation protein | |
| SFV_0250 | 6 | 21 | 3.427605 | tail protein | |
| SFV_0251 | 6 | 23 | -3.734859 | tail protein | |
| SFV_0252 | 4 | 25 | -5.967965 | tail protein | |
| SFV_0253 | 4 | 28 | -7.247111 | hypothetical protein | |
| SFV_0254 | 2 | 37 | -8.910259 | hypothetical protein | |
| SFV_0255 | 3 | 41 | -9.741856 | phage tail fiber protein | |
| SFV_0256 | 2 | 39 | -8.255130 | serotype-specific glucosyl transferase | |
| SFV_0257 | 3 | 34 | -5.047089 | bactoprenol glucosyl transferase | |
| SFV_0258 | 3 | 32 | -4.305507 | bactoprenol-linked glucose translocase | |
| SFV_0259 | 3 | 34 | -4.784352 | integrase | |
| SFV_0260 | 3 | 30 | -5.939469 | bacteriophage protein | |
| SFV_0261 | 4 | 29 | -6.872555 | bacteriophage protein | |
| SFV_0262 | 4 | 33 | -8.328226 | hypothetical protein | |
| SFV_0263 | 3 | 30 | -6.730886 | bacteriophage protein | |
| SFV_0264 | 3 | 32 | -5.792722 | hypothetical protein | |
| SFV_0265 | 3 | 30 | -4.844851 | phage-related DNA recombination protein | |
| SFV_0266 | 4 | 27 | -1.645875 | hypothetical protein | |
| SFV_0267 | 3 | 26 | -2.110179 | IS1 encoded protein | |
| SFV_0268 | 3 | 25 | -1.855265 | IS1 ORF2 | |
| SFV_0269 | 4 | 26 | -2.272513 | bacteriophage protein | |
| SFV_0270 | 3 | 24 | -2.821849 | prophage repressor CI | |
| SFV_0271 | 2 | 25 | -2.479390 | IS4 orf | |
| SFV_0272 | 1 | 29 | -3.781531 | replication protein O | |
| SFV_0273 | 1 | 30 | -3.032240 | replication protein P | |
| SFV_0274 | 0 | 32 | -3.730311 | hypothetical protein | |
| SFV_0275 | -1 | 33 | -3.229636 | DNA-binding protein Roi of bacteriophage | |
| SFV_0276 | 1 | 33 | -2.802603 | crossover junction endodeoxyribonuclease | |
| SFV_0277 | 2 | 31 | -3.017808 | antitermination protein | |
| SFV_0278 | 2 | 28 | -2.527453 | cell lysis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0248 | TYPE4SSCAGA | 34 | 0.003 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0251 | cloacin | 28 | 0.028 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0260 | CLENTEROTOXN | 28 | 0.049 | Clostridium enterotoxin signature. | |
>CLENTEROTOXN#Clostridium enterotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0273 | DNABINDINGHU | 31 | 0.002 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 5 | SFV_0295 | SFV_0330 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0295 | 2 | 19 | -1.932980 | hypothetical protein | |
| SFV_0296 | 2 | 19 | 0.607802 | hypothetical protein | |
| SFV_0297 | 2 | 19 | 0.720291 | toxin YafO | |
| SFV_0298 | 2 | 22 | 1.698257 | antitoxin of the YafO-YafN toxin-antitoxin | |
| SFV_0299 | 1 | 22 | 1.751258 | DNA polymerase IV | |
| SFV_0301 | 1 | 22 | 1.622880 | hypothetical protein | |
| SFV_0300 | 1 | 19 | 1.130020 | flagellar biosynthetic protein FlhA | |
| SFV_0302 | 0 | 15 | 0.802989 | hypothetical protein | |
| SFV_0303 | -1 | 15 | 1.286577 | lipoprotein | |
| SFV_0304 | -1 | 15 | 1.401563 | hypothetical protein | |
| SFV_0305 | -1 | 16 | 2.271524 | amidotransferase | |
| SFV_0306 | -1 | 22 | 3.982607 | phosphoheptose isomerase | |
| SFV_0307 | 0 | 24 | 4.628336 | acyl-CoA dehydrogenase | |
| SFV_0308 | 2 | 27 | 4.399632 | C-lysozyme inhibitor | |
| SFV_0309 | 3 | 23 | 4.084088 | hypothetical protein | |
| SFV_0310 | 4 | 25 | 3.946864 | Rhs family protein | |
| SFV_0311 | 3 | 23 | 3.604716 | Rhs family protein | |
| SFV_0312 | 2 | 19 | 0.684009 | Rhs family protein | |
| SFV_0313 | 1 | 15 | -0.052313 | cytoplasmic protein | |
| SFV_0314 | 0 | 14 | 0.061370 | Rhs family protein | |
| SFV_0315 | 0 | 19 | -1.701830 | IS1 ORF2 | |
| SFV_0316 | 1 | 22 | -4.239782 | IS1 encoded protein | |
| SFV_0317 | -1 | 12 | -1.245305 | dehydrogenase subunit | |
| SFV_0318 | 1 | 13 | 0.617627 | hypothetical protein | |
| SFV_0319 | 1 | 16 | 1.677201 | transporter | |
| SFV_0320 | 1 | 17 | 2.179013 | hypothetical protein | |
| SFV_0321 | 0 | 17 | 2.320623 | hypothetical protein | |
| SFV_0322 | 0 | 21 | 3.987028 | choline dehydrogenase | |
| SFV_0323 | -2 | 14 | 2.506073 | betaine aldehyde dehydrogenase | |
| SFV_0324 | -4 | 13 | 1.792224 | transcriptional regulator BetI | |
| SFV_0325 | -3 | 12 | 1.794031 | choline transport protein BetT | |
| SFV_0326 | -1 | 14 | 2.107224 | IS1 encoded protein | |
| SFV_0327 | -3 | 15 | 2.462664 | IS1 ORF2 | |
| SFV_0328 | -2 | 13 | 2.483910 | phage transposase | |
| SFV_0329 | 0 | 17 | 3.442944 | taurine ABC transporter substrate-binding | |
| SFV_0330 | 0 | 15 | 3.302317 | taurine ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0296 | SACTRNSFRASE | 28 | 0.009 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0301 | OMPADOMAIN | 38 | 2e-05 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0314 | CHANLCOLICIN | 30 | 0.027 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0324 | HTHTETR | 63 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 6 | SFV_0387 | SFV_0410 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0387 | 0 | 15 | -4.912071 | exodeoxyribonuclease VII small subunit | |
| SFV_0388 | 0 | 23 | -8.438838 | thiamine biosynthesis protein ThiI | |
| SFV_0389 | 0 | 25 | -8.521540 | DJ-1 family protein | |
| SFV_0390 | 0 | 29 | -9.978590 | 2-dehydropantoate 2-reductase | |
| SFV_0391 | 1 | 30 | -10.746186 | nucleotide-binding protein | |
| SFV_0392 | 2 | 34 | -11.071682 | hypothetical protein | |
| SFV_0393 | 1 | 31 | -9.415382 | hypothetical protein | |
| SFV_0394 | 0 | 21 | -5.854232 | transport protein | |
| SFV_0395 | 0 | 22 | -6.592167 | hypothetical protein | |
| SFV_0396 | 0 | 13 | -2.714532 | hypothetical protein | |
| SFV_0397 | 2 | 17 | -0.898993 | hypothetical protein | |
| SFV_0398 | 3 | 22 | 0.761054 | hypothetical protein | |
| SFV_0400 | 4 | 22 | 0.888182 | cytochrome o ubiquinol oxidase subunit IV | |
| SFV_0401 | -1 | 18 | 1.591480 | cytochrome o ubiquinol oxidase subunit III | |
| SFV_0404 | -2 | 15 | 1.048249 | ISSfl4 ORF3 | |
| SFV_0405 | 0 | 19 | 0.307922 | ISSfl4 ORF3 | |
| SFV_0406 | 0 | 19 | 0.152209 | ISSfl4 ORF2 | |
| SFV_0407 | 0 | 18 | -0.208568 | ISSfl4 ORF1 | |
| SFV_0408 | 1 | 21 | 0.094328 | muropeptide transporter | |
| SFV_0409 | 2 | 27 | -0.488289 | hypothetical protein | |
| SFV_0410 | 3 | 26 | -0.253097 | trigger factor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0394 | TCRTETA | 84 | 1e-19 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0408 | TCRTETA | 39 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0409 | PF06291 | 29 | 0.006 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| 7 | SFV_0477 | SFV_0509 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0477 | 2 | 18 | 3.240234 | allantoate amidohydrolase | |
| SFV_0478 | 1 | 17 | 3.460441 | carboxylase | |
| SFV_0479 | 1 | 19 | 3.128765 | carbamate kinase | |
| SFV_0480 | 2 | 19 | 2.464236 | phosphoribosylaminoimidazole carboxylase ATPase | |
| SFV_0481 | 3 | 21 | 1.884986 | phosphoribosylaminoimidazole carboxylase | |
| SFV_0482 | 3 | 19 | 1.434461 | UDP-2,3-diacylglucosamine hydrolase | |
| SFV_0483 | 2 | 18 | 0.150955 | peptidyl-prolyl cis-trans isomerase B | |
| SFV_0484 | 1 | 13 | 0.759607 | cysteinyl-tRNA synthetase | |
| SFV_0485 | 2 | 19 | -0.630579 | hypothetical protein | |
| SFV_0486 | 0 | 18 | -1.023216 | hypothetical protein | |
| SFV_0487 | 1 | 20 | -0.082120 | bifunctional 5,10-methylene-tetrahydrofolate | |
| SFV_0488 | 0 | 29 | -0.826966 | fimbrial-like protein | |
| SFV_0491 | 0 | 27 | -2.488325 | IS1 ORF2 | |
| SFV_0492 | 0 | 29 | -3.820051 | IS1 encoded protein | |
| SFV_0494 | 0 | 24 | -3.003183 | fimbrial protein | |
| SFV_0495 | -1 | 15 | -1.902775 | insertion element IS2 transposase InsD | |
| SFV_0496 | -1 | 15 | -2.223075 | insertion sequence 2 OrfA protein | |
| SFV_0497 | -1 | 13 | -1.912007 | transcriptional regulator FimZ | |
| SFV_0499 | 0 | 15 | -0.885552 | *envelope protein | |
| SFV_0500 | -2 | 12 | 0.190524 | hypothetical protein | |
| SFV_0502 | -1 | 12 | 0.360932 | bacteriophage N4 adsorption protein B | |
| SFV_0503 | -2 | 14 | -2.140168 | sensor kinase CusS | |
| SFV_0504 | 2 | 18 | -2.478413 | DNA-binding transcriptional activator CusR | |
| SFV_0506 | 2 | 23 | -3.668426 | periplasmic copper-binding protein | |
| SFV_0508 | 2 | 26 | -1.899252 | IS629 ORF2 | |
| SFV_0509 | 2 | 28 | -2.410679 | IS629 ORF1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0479 | CARBMTKINASE | 385 | e-137 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0484 | RTXTOXIND | 29 | 0.030 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0497 | HTHFIS | 58 | 7e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0504 | HTHFIS | 87 | 5e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 8 | SFV_0522 | SFV_0557 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0522 | 5 | 28 | -2.525694 | IS150 ORF1(ORF A) | |
| SFV_0523 | 3 | 25 | -2.202559 | IS600 ORF2 | |
| SFV_0524 | 2 | 14 | -0.620016 | IS629 ORF2 | |
| SFV_0525 | 0 | 13 | -0.376797 | IS629 ORF1 | |
| SFV_0526 | -1 | 13 | -0.398793 | IS600 ORF1 | |
| SFV_0527 | -2 | 10 | 1.692710 | IS150 ORF2 | |
| SFV_0528 | -1 | 10 | 2.626844 | phosphopantetheinyltransferase component of | |
| SFV_0529 | -1 | 11 | 3.050220 | outer membrane receptor FepA | |
| SFV_0530 | -1 | 13 | 3.181045 | enterobactin/ferric enterobactin esterase | |
| SFV_0531 | 1 | 15 | 3.814908 | cytoplasmic protein | |
| SFV_0532 | 1 | 14 | 4.517733 | enterobactin synthase subunit F | |
| SFV_0533 | 1 | 15 | 4.724547 | IS1 encoded protein | |
| SFV_0534 | 1 | 15 | 4.938898 | IS1 ORF2 | |
| SFV_0536 | 1 | 17 | 5.064726 | iron-enterobactin transporter ATP-binding | |
| SFV_0537 | 1 | 17 | 5.230251 | iron-enterobactin transporter permease | |
| SFV_0538 | 0 | 17 | 5.103392 | iron-enterobactin transporter membrane protein | |
| SFV_0539 | 0 | 18 | 4.530794 | enterobactin exporter EntS | |
| SFV_0540 | -1 | 20 | 4.638369 | iron-enterobactin ABC transporter | |
| SFV_0542 | -1 | 22 | 4.590071 | enterobactin synthase subunit E | |
| SFV_0543 | 0 | 19 | 4.471285 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | |
| SFV_0544 | 0 | 17 | 4.117701 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | |
| SFV_0545 | 0 | 17 | 3.003850 | hypothetical protein | |
| SFV_0546 | 0 | 14 | 2.707281 | carbon starvation protein | |
| SFV_0547 | 0 | 15 | 0.722547 | hypothetical protein | |
| SFV_0548 | 0 | 16 | -0.023648 | hypothetical protein | |
| SFV_0549 | 0 | 18 | -1.222407 | aminotransferase | |
| SFV_0550 | 1 | 22 | -2.671078 | hypothetical protein | |
| SFV_0551 | 0 | 23 | -1.889514 | IS911 ORF2 | |
| SFV_0552 | 0 | 28 | -6.308685 | IS911 ORF1 | |
| SFV_0553 | 1 | 25 | -6.185962 | hypothetical protein | |
| SFV_0554 | 1 | 22 | -5.593807 | hypothetical protein | |
| SFV_0555 | 0 | 17 | -3.938701 | ISEhe3 orfA | |
| SFV_0556 | -1 | 16 | -3.803736 | ISEhe3 orfB | |
| SFV_0557 | -1 | 15 | -3.648612 | LysR family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0528 | ENTSNTHTASED | 278 | 5e-97 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0539 | TCRTETA | 35 | 5e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0540 | FERRIBNDNGPP | 63 | 2e-13 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0543 | ISCHRISMTASE | 439 | e-159 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0544 | DHBDHDRGNASE | 358 | e-128 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0555 | HTHFIS | 27 | 0.011 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 9 | SFV_0589 | SFV_0614 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0589 | 3 | 18 | -0.919293 | PnuC protein | |
| SFV_0590 | 3 | 20 | -0.492006 | quinolinate synthetase | |
| SFV_0594 | 3 | 21 | -0.460833 | ***tol-pal system protein YbgF | |
| SFV_0595 | 3 | 22 | -0.207643 | peptidoglycan-associated outer membrane | |
| SFV_0596 | 3 | 18 | -0.272946 | translocation protein TolB | |
| SFV_0597 | 3 | 19 | -0.172980 | cell envelope integrity inner membrane protein | |
| SFV_0598 | 1 | 20 | 0.057466 | colicin uptake protein TolR | |
| SFV_0599 | -2 | 11 | -0.947440 | colicin uptake protein TolQ | |
| SFV_0600 | -1 | 9 | -1.256727 | acyl-CoA thioester hydrolase | |
| SFV_0601 | -1 | 12 | -0.967773 | hypothetical protein | |
| SFV_0602 | -1 | 17 | -0.385242 | cytochrome d terminal oxidase polypeptide | |
| SFV_0603 | -1 | 16 | -0.058694 | cytochrome d terminal oxidase, polypeptide | |
| SFV_0604 | 0 | 18 | 0.803421 | alpha-mannosidase | |
| SFV_0606 | 2 | 25 | 1.908797 | DNA-binding transcriptional repressor MngR | |
| SFV_0607 | 1 | 29 | 2.925656 | succinyl-CoA synthetase subunit alpha | |
| SFV_0608 | 1 | 27 | 2.999019 | succinyl-CoA synthetase subunit beta | |
| SFV_0609 | 2 | 25 | 2.717289 | dihydrolipoamide succinyltransferase | |
| SFV_0610 | 1 | 25 | 1.675485 | 2-oxoglutarate dehydrogenase E1 | |
| SFV_0611 | 1 | 23 | 0.086282 | succinate dehydrogenase iron-sulfur subunit | |
| SFV_0612 | 0 | 16 | -0.910004 | succinate dehydrogenase flavoprotein subunit | |
| SFV_0613 | 0 | 18 | -2.608085 | succinate dehydrogenase cytochrome b556 small | |
| SFV_0614 | 0 | 18 | -3.448481 | succinate dehydrogenase cytochrome b556 large |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0595 | OMPADOMAIN | 116 | 5e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0597 | IGASERPTASE | 64 | 7e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0609 | RTXTOXIND | 29 | 0.041 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0611 | TCRTETOQM | 31 | 0.003 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 10 | SFV_0625 | SFV_0630 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0625 | 1 | 21 | 3.874115 | hydrolase-oxidase | |
| SFV_0626 | 1 | 22 | 4.032602 | transport protein | |
| SFV_0627 | 2 | 27 | 4.603572 | deoxyribodipyrimidine photolyase | |
| SFV_0628 | 3 | 31 | 4.906443 | hypothetical protein | |
| SFV_0629 | 4 | 33 | 5.326207 | hypothetical protein | |
| SFV_0630 | 3 | 28 | 4.785707 | Rhs family protein |
| 11 | SFV_0694 | SFV_0758 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0694 | -1 | 13 | -3.230733 | D-alanyl-D-alanine carboxypeptidase fraction A | |
| SFV_0695 | -1 | 14 | -2.374526 | hypothetical protein | |
| SFV_0696 | -1 | 15 | -2.211169 | lipoate-protein ligase B | |
| SFV_0697 | -2 | 15 | -2.452243 | DNA-binding transcriptional regulator | |
| SFV_0698 | 0 | 16 | -1.674189 | lipoyl synthase | |
| SFV_0699 | 0 | 14 | -2.307354 | twin arginine translocase E | |
| SFV_0700 | 1 | 18 | -3.045951 | amidase | |
| SFV_0701 | 2 | 18 | -3.451220 | camphor resistance protein CrcB | |
| SFV_0702 | 1 | 18 | -3.592296 | cold shock protein CspE | |
| SFV_0703 | 1 | 18 | -2.704902 | palmitoyl transferase | |
| SFV_0704 | 0 | 17 | -1.650266 | C4-dicarboxylate transporter DcuC | |
| SFV_0706 | 1 | 19 | -1.544816 | repressor protein | |
| SFV_0707 | 1 | 18 | -0.191367 | phage transposase | |
| SFV_0708 | 1 | 17 | 0.974593 | IS600 ORF1 | |
| SFV_0709 | 2 | 19 | 0.770210 | IS600 ORF2 | |
| SFV_0710 | 2 | 18 | 1.126489 | bacteriophage protein | |
| SFV_0711 | 1 | 21 | 1.052923 | bacteriophage protein | |
| SFV_0712 | 1 | 20 | 0.390785 | bacteriophage protein | |
| SFV_0713 | 0 | 21 | -0.117540 | bacteriophage protein | |
| SFV_0714 | 0 | 24 | -1.418464 | bacteriophage protein | |
| SFV_0715 | 1 | 24 | -0.663884 | IS2 ORF2 | |
| SFV_0716 | 1 | 22 | -1.795653 | insertion sequence 2 OrfA protein | |
| SFV_0717 | 0 | 23 | -2.085356 | bacteriophage protein | |
| SFV_0718 | 2 | 23 | -0.713835 | bacteriophage protein | |
| SFV_0719 | 2 | 24 | -0.204243 | IS911 ORF1 | |
| SFV_0720 | 3 | 26 | 0.070780 | IS911 ORF2 | |
| SFV_0721 | 2 | 26 | -0.487798 | endopeptidase | |
| SFV_0722 | 2 | 26 | -0.752802 | IS2 ORF2 | |
| SFV_0723 | 3 | 24 | -0.589779 | ISSfl4 ORF3 | |
| SFV_0724 | 1 | 27 | -1.101976 | ISSfl4 ORF2 | |
| SFV_0725 | 0 | 24 | -1.855303 | ISSfl4 ORF1 | |
| SFV_0726 | -1 | 25 | -3.028355 | bacteriophage lambda lysozyme | |
| SFV_0727 | 0 | 22 | -3.229450 | IS600 ORF1 | |
| SFV_0728 | 0 | 23 | -3.445786 | IS600 ORF2 | |
| SFV_0733 | 2 | 26 | -4.618384 | ****bacteriophage protein | |
| SFV_0734 | 2 | 24 | -4.483249 | prophage protein | |
| SFV_0735 | 3 | 27 | -4.887071 | hypothetical protein | |
| SFV_0736 | 3 | 26 | -3.664337 | hypothetical protein | |
| SFV_0737 | 1 | 29 | -1.350962 | bacteriophage protein | |
| SFV_0739 | 1 | 29 | -0.277401 | bacteriophage protein | |
| SFV_0740 | 0 | 24 | 0.188276 | bacteriophage protein | |
| SFV_0741 | 1 | 26 | 0.155772 | DNA-binding transcriptional regulator DicC | |
| SFV_0742 | 1 | 26 | -0.147681 | hypothetical protein | |
| SFV_0743 | 1 | 22 | 0.150394 | insertion element IS2 transposase InsD | |
| SFV_0744 | 5 | 28 | -2.770432 | insertion sequence 2 OrfA protein | |
| SFV_0745 | 3 | 22 | -2.023358 | bacteriophage protein | |
| SFV_0746 | 2 | 21 | -2.259599 | IS600 ORF2 | |
| SFV_0747 | 1 | 17 | -2.618561 | IS600 ORF1 | |
| SFV_0748 | 0 | 13 | -1.952622 | hypothetical protein | |
| SFV_0749 | 0 | 13 | -1.707994 | invasion plasmid antigen | |
| SFV_0750 | 2 | 14 | -0.531096 | 6-phosphogluconolactonase | |
| SFV_0752 | 2 | 13 | -0.308642 | hypothetical protein | |
| SFV_0753 | 1 | 14 | 0.602165 | membrane pump protein | |
| SFV_0754 | 0 | 13 | 2.138861 | hypothetical protein | |
| SFV_0755 | 1 | 13 | 3.331957 | pectinesterase | |
| SFV_0756 | 2 | 15 | 3.649863 | kinase inhibitor protein | |
| SFV_0758 | -1 | 13 | 3.191947 | adenosylmethionine-8-amino-7-oxononanoate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0694 | SECA | 31 | 0.015 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0723 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 12 | SFV_0806 | SFV_0825 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0806 | -2 | 14 | 3.318902 | formate acetyltransferase | |
| SFV_0807 | -1 | 12 | 3.060477 | pyruvate formate-lyase 2 activating enzyme | |
| SFV_0808 | -1 | 12 | 2.477194 | fructose-6-phosphate aldolase | |
| SFV_0809 | -1 | 12 | 2.342917 | molybdopterin biosynthesis protein MoeB | |
| SFV_0810 | 1 | 14 | -1.272388 | molybdopterin biosynthesis protein MoeA | |
| SFV_0811 | 1 | 16 | -3.147607 | L-asparaginase | |
| SFV_0812 | 0 | 13 | -3.305817 | glutathione transporter ATP-binding protein | |
| SFV_0813 | 0 | 12 | -4.503784 | transport protein | |
| SFV_0814 | 0 | 11 | -5.061778 | transport system permease | |
| SFV_0816 | 0 | 11 | -6.018287 | hypothetical protein | |
| SFV_0817 | 0 | 11 | -2.712392 | hypothetical protein | |
| SFV_0818 | 0 | 11 | -0.569065 | ribosomal protein S12 methylthiotransferase | |
| SFV_0819 | -1 | 13 | -1.003237 | biofilm formation regulatory protein BssR | |
| SFV_0821 | -2 | 11 | -0.411416 | transferase | |
| SFV_0823 | -2 | 13 | -0.517628 | IS600 ORF1 | |
| SFV_0824 | -1 | 12 | -1.249935 | IS600 ORF2 | |
| SFV_0825 | 2 | 15 | -0.527004 | DNA-binding transcriptional repressor DeoR |
| 13 | SFV_0846 | SFV_0851 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0846 | 0 | 15 | -4.775949 | arginine transporter permease subunit ArtM | |
| SFV_0847 | 0 | 14 | -4.980626 | arginine transporter permease subunit ArtQ | |
| SFV_0848 | 0 | 20 | -7.906445 | arginine ABC transporter substrate-binding | |
| SFV_0849 | -1 | 23 | -7.980689 | arginine transporter ATP-binding subunit | |
| SFV_0850 | 1 | 23 | -7.099935 | lipoprotein | |
| SFV_0851 | 1 | 20 | -6.148140 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0849 | PF05272 | 30 | 0.010 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 14 | SFV_0889 | SFV_0900 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0889 | 2 | 23 | 0.316947 | MFS family transporter protein | |
| SFV_0890 | 4 | 28 | 0.596850 | ISSfl4 ORF1 | |
| SFV_0891 | 4 | 28 | 0.715911 | ISSfl4 ORF2 | |
| SFV_0892 | 4 | 27 | 0.441658 | ISSfl4 ORF3 | |
| SFV_0893 | 2 | 25 | -1.048016 | IS629 ORF1 | |
| SFV_0894 | 2 | 25 | -1.939042 | IS629 ORF2 | |
| SFV_0895 | 3 | 27 | -2.502773 | ISSfl4 ORF3 | |
| SFV_0896 | 2 | 23 | -2.695830 | IS1 encoded protein | |
| SFV_0897 | 5 | 30 | -1.901546 | IS1 ORF2 | |
| SFV_0898 | 4 | 29 | -2.953967 | LysR family transcriptional regulator | |
| SFV_0900 | 2 | 27 | -2.141998 | IS600 ORF1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0892 | RTXTOXIND | 40 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 15 | SFV_0940 | SFV_0951 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0940 | 2 | 19 | -0.896416 | alkanesulfonate transporter substrate-binding | |
| SFV_0941 | 5 | 26 | -1.220814 | NAD(P)H-dependent FMN reductase | |
| SFV_0942 | 7 | 34 | -2.312678 | IS1 encoded protein | |
| SFV_0943 | 5 | 30 | -3.396804 | IS1 ORF2 | |
| SFV_0944 | 2 | 23 | -4.317272 | fimbrial-like protein | |
| SFV_0945 | 2 | 21 | -3.841486 | IS1 ORF2 | |
| SFV_0946 | 2 | 24 | -4.172025 | IS1 ORF2 | |
| SFV_0947 | 1 | 24 | -4.421547 | IS1 encoded protein | |
| SFV_0948 | 1 | 24 | -4.034109 | chaperone | |
| SFV_0949 | 0 | 21 | -3.881121 | outer membrane protein | |
| SFV_0950 | 0 | 21 | -3.518388 | hypothetical protein | |
| SFV_0951 | 0 | 21 | -3.155751 | fimbrial-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0944 | FIMBRIALPAPE | 27 | 0.021 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0949 | PF00577 | 824 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 16 | SFV_0960 | SFV_0965 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0960 | 2 | 13 | -0.804710 | paraquat-inducible protein B | |
| SFV_0961 | 3 | 17 | -0.776084 | hypothetical protein | |
| SFV_0962 | 2 | 17 | -0.744120 | 3-hydroxydecanoyl-ACP dehydratase | |
| SFV_0963 | 3 | 17 | -0.294785 | ATP-dependent protease | |
| SFV_0964 | 2 | 16 | -0.182994 | hypothetical protein | |
| SFV_0965 | 3 | 15 | -0.050647 | outer membrane protein OmpA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0965 | OUTRMMBRANEA | 598 | 0.0 | Outer membrane protein A signature. | |
>OUTRMMBRANEA#Outer membrane protein A signature. | |||||
| 17 | SFV_1009 | SFV_1019 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1009 | 0 | 18 | -5.157780 | IS1 ORF2 | |
| SFV_1010 | -1 | 20 | -5.849205 | IS1 encoded protein | |
| SFV_1011 | 0 | 18 | -4.944228 | chaperone-modulator protein CbpM | |
| SFV_1012 | 0 | 20 | -5.339304 | curved DNA-binding protein CbpA | |
| SFV_1013 | 0 | 18 | -4.489782 | hypothetical protein | |
| SFV_1014 | 1 | 15 | 1.121029 | glucose-1-phosphatase/inositol phosphatase | |
| SFV_1015 | 1 | 18 | 2.245526 | hypothetical protein | |
| SFV_1016 | 1 | 17 | 3.382650 | TrpR binding protein WrbA | |
| SFV_1017 | 0 | 18 | 3.392363 | hypothetical protein | |
| SFV_1018 | 0 | 18 | 3.701112 | transport protein | |
| SFV_1019 | -1 | 19 | 3.932780 | hypothetical protein |
| 18 | SFV_1030 | SFV_1078 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1030 | -1 | 23 | -6.003729 | hypothetical protein | |
| SFV_1032 | 0 | 23 | -6.398345 | PGA biosynthesis protein | |
| SFV_1033 | -1 | 21 | -5.959263 | N-glycosyltransferase | |
| SFV_1034 | -1 | 25 | -5.792863 | IS1 ORF2 | |
| SFV_1037 | 0 | 28 | -7.811791 | hypothetical protein | |
| SFV_1038 | 0 | 26 | -7.419023 | rtn-like protein | |
| SFV_1039 | -1 | 19 | -3.077712 | IS3 ORF2 | |
| SFV_1040 | 0 | 18 | -3.875111 | IS3 ORF1 | |
| SFV_1041 | 0 | 18 | -4.769098 | hypothetical protein | |
| SFV_1042 | 0 | 19 | -5.492940 | hypothetical protein | |
| SFV_1045 | -1 | 18 | -4.752318 | *hydrolase | |
| SFV_1046 | 1 | 24 | -5.738330 | oxidoreductase component | |
| SFV_1047 | 2 | 29 | -7.237713 | hypothetical protein | |
| SFV_1049 | 1 | 29 | -7.179839 | curli assembly protein CsgF | |
| SFV_1050 | 1 | 27 | -6.812860 | curli assembly protein CsgE | |
| SFV_1051 | 2 | 25 | -5.297029 | DNA-binding transcriptional regulator CsgD | |
| SFV_1052 | 2 | 23 | -5.324961 | curlin minor subunit | |
| SFV_1054 | 0 | 16 | -3.787754 | IS600 ORF1 | |
| SFV_1055 | -2 | 11 | -1.243385 | IS600 ORF2 | |
| SFV_1056 | 0 | 11 | -0.710917 | hypothetical protein | |
| SFV_1057 | -1 | 11 | -0.304334 | hypothetical protein | |
| SFV_1059 | 0 | 17 | -2.382009 | glucans biosynthesis protein | |
| SFV_1060 | 1 | 18 | -1.083332 | glucan biosynthesis protein G | |
| SFV_1061 | 1 | 19 | -0.667903 | glucosyltransferase MdoH | |
| SFV_1062 | 4 | 29 | -3.055063 | IS91 orf | |
| SFV_1063 | 4 | 31 | -4.242868 | IS91 ORF2 | |
| SFV_1064 | 4 | 33 | -4.268869 | hypothetical protein | |
| SFV_1065 | 2 | 24 | 1.319803 | IS629 ORF2 | |
| SFV_1066 | 1 | 23 | 1.078808 | IS629 ORF1 | |
| SFV_1067 | 1 | 24 | 1.442974 | IS911 ORF1 | |
| SFV_1068 | 3 | 26 | 2.138008 | IS911 ORF2 | |
| SFV_1069 | 1 | 25 | 1.488347 | insertion sequence 2 OrfA protein | |
| SFV_1070 | 3 | 25 | 1.223556 | insertion element IS2 transposase InsD | |
| SFV_1071 | 5 | 29 | -2.223256 | IS629 ORF1 | |
| SFV_1072 | 2 | 23 | -1.993379 | IS629 ORF2 | |
| SFV_1073 | -1 | 18 | -2.694880 | IS629 ORF2 | |
| SFV_1074 | -1 | 15 | -3.291261 | IS600 ORF1 | |
| SFV_1075 | -2 | 16 | -3.071900 | IS600 ORF2 | |
| SFV_1076 | -3 | 15 | -3.958962 | hypothetical protein | |
| SFV_1077 | 2 | 17 | -1.910964 | lipid A biosynthesis lauroyl acyltransferase | |
| SFV_1078 | 2 | 19 | -2.549063 | hypothetical protein |
| 19 | SFV_1090 | SFV_1106 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1090 | 2 | 16 | 0.961732 | virulence factor | |
| SFV_1091 | 1 | 14 | 0.778165 | virulence factor | |
| SFV_1092 | 1 | 16 | 0.065785 | flagellar synthesis protein FlgN | |
| SFV_1093 | 1 | 15 | 1.885871 | anti-sigma28 factor FlgM | |
| SFV_1094 | 1 | 14 | 1.871224 | flagellar basal body P-ring biosynthesis protein | |
| SFV_1095 | 2 | 13 | 2.027189 | flagellar basal-body rod protein FlgB | |
| SFV_1097 | 2 | 12 | 1.967220 | flagellar basal body rod modification protein | |
| SFV_1098 | 1 | 12 | 1.897351 | flagellar hook protein FlgE | |
| SFV_1099 | 0 | 11 | 1.850067 | flagellar basal body rod protein FlgF | |
| SFV_1100 | 0 | 12 | 2.119221 | flagellar basal body rod protein FlgG | |
| SFV_1101 | 1 | 13 | 1.840818 | flagellar basal body L-ring protein | |
| SFV_1102 | 1 | 13 | 1.470569 | flagellar basal body P-ring biosynthesis protein | |
| SFV_1103 | 2 | 15 | 1.180909 | flagellar rod assembly protein/muramidase FlgJ | |
| SFV_1105 | 2 | 14 | 0.879240 | flagellar hook-associated protein FlgL | |
| SFV_1106 | 2 | 15 | 1.388671 | ribonuclease E |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1098 | FLGHOOKAP1 | 39 | 3e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1100 | FLGHOOKAP1 | 44 | 4e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1101 | FLGLRINGFLGH | 350 | e-126 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1102 | FLGPRINGFLGI | 423 | e-150 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1103 | FLGFLGJ | 503 | 0.0 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1105 | FLAGELLIN | 45 | 2e-07 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1106 | IGASERPTASE | 68 | 2e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 20 | SFV_1258 | SFV_1269 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1258 | 0 | 17 | -3.161301 | oligopeptide transporter ATP-binding protein | |
| SFV_1259 | -1 | 17 | -3.188678 | peptide ABC transporter ATP-binding protein | |
| SFV_1260 | -1 | 19 | -3.859107 | dsDNA-mimic protein | |
| SFV_1261 | -1 | 21 | -2.984557 | cardiolipin synthetase | |
| SFV_1262 | -1 | 23 | -4.112780 | voltage-gated potassium channel | |
| SFV_1263 | 1 | 21 | -2.065718 | IS600 ORF1 | |
| SFV_1264 | 1 | 16 | -1.845837 | IS600 ORF2 | |
| SFV_1265 | 2 | 18 | -2.326725 | hypothetical protein | |
| SFV_1266 | 0 | 20 | -3.555482 | transport protein TonB | |
| SFV_1267 | 0 | 23 | -5.606354 | acyl-CoA thioester hydrolase | |
| SFV_1268 | 0 | 23 | -5.694396 | intracellular septation protein A | |
| SFV_1269 | 0 | 21 | -3.910509 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1259 | HTHFIS | 31 | 0.008 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1265 | adhesinmafb | 31 | 4e-04 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1266 | TONBPROTEIN | 253 | 2e-87 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 21 | SFV_1311 | SFV_1333 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1311 | -1 | 17 | 3.584504 | glutamine synthetase | |
| SFV_1312 | 1 | 18 | 3.605571 | gamma-glutamyl-gamma-aminobutyrate hydrolase | |
| SFV_1313 | 1 | 18 | 3.099861 | DNA-binding transcriptional repressor PuuR | |
| SFV_1314 | 2 | 18 | 3.189837 | gamma-glutamyl-gamma-aminobutyraldehyde | |
| SFV_1315 | 1 | 16 | 2.162658 | oxidoreductase | |
| SFV_1316 | 3 | 14 | 0.914701 | 4-aminobutyrate aminotransferase | |
| SFV_1317 | 2 | 14 | -1.357585 | phage shock protein operon transcriptional | |
| SFV_1318 | 2 | 15 | -1.519959 | phage shock protein PspA | |
| SFV_1319 | -1 | 16 | 0.062794 | phage shock protein B | |
| SFV_1320 | -2 | 20 | 0.568923 | DNA-binding transcriptional activator PspC | |
| SFV_1321 | -2 | 22 | 1.693928 | peripheral inner membrane phage-shock protein | |
| SFV_1322 | -1 | 17 | 1.697298 | thiosulfate:cyanide sulfurtransferase | |
| SFV_1324 | 0 | 18 | 2.202325 | IS1 ORF2 | |
| SFV_1327 | 1 | 19 | 1.839879 | binding-protein dependent transport protein | |
| SFV_1328 | 2 | 17 | 0.573227 | transport system permease | |
| SFV_1329 | 3 | 16 | 1.036500 | oxidoreductase | |
| SFV_1332 | 3 | 16 | 1.012353 | hypothetical protein | |
| SFV_1333 | 2 | 17 | 0.531323 | beta-phosphoglucomutase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1317 | HTHFIS | 341 | e-117 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1319 | MPTASEINHBTR | 25 | 0.041 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| 22 | SFV_1343 | SFV_1387 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1343 | 2 | 26 | -1.436723 | hypothetical protein | |
| SFV_1344 | 1 | 23 | -0.418274 | hypothetical protein | |
| SFV_1345 | 1 | 24 | -0.520000 | ISSfl2 ORF | |
| SFV_1346 | 1 | 20 | -2.532156 | hypothetical protein | |
| SFV_1347 | 1 | 22 | -0.925227 | hypothetical protein | |
| SFV_1348 | 3 | 27 | -0.335249 | IS600 ORF2 | |
| SFV_1349 | 2 | 27 | 0.352778 | IS600 ORF1 | |
| SFV_1350 | 2 | 27 | 1.153909 | IS911 ORF1 | |
| SFV_1351 | 1 | 28 | 1.165873 | IS911 ORF2 | |
| SFV_1352 | 0 | 28 | -0.042730 | insertion element IS2 transposase InsD | |
| SFV_1353 | -1 | 25 | -1.696758 | insertion sequence 2 OrfA protein | |
| SFV_1354 | 1 | 24 | -1.766113 | bacteriophage protein | |
| SFV_1355 | 0 | 23 | -2.510922 | replication protein | |
| SFV_1356 | -1 | 26 | -3.776757 | bacteriophage protein | |
| SFV_1357 | -1 | 24 | -3.119336 | hypothetical protein | |
| SFV_1358 | -1 | 25 | -2.671915 | hypothetical protein | |
| SFV_1359 | 4 | 28 | -2.985161 | bacteriophage protein | |
| SFV_1360 | 4 | 30 | -3.076119 | IS1 ORF2 | |
| SFV_1361 | 4 | 30 | -3.049366 | prophage protein | |
| SFV_1362 | 5 | 30 | -2.422188 | bacteriophage protein | |
| SFV_1363 | 6 | 30 | -2.490795 | hypothetical protein | |
| SFV_1368 | 7 | 27 | -1.805932 | ****integrase | |
| SFV_1369 | 4 | 26 | 0.268598 | IS1 encoded protein | |
| SFV_1370 | 4 | 23 | 0.407511 | IS1 ORF2 | |
| SFV_1371 | 4 | 23 | -0.297164 | IS600 ORF2 | |
| SFV_1372 | 3 | 20 | -0.476267 | IS1 encoded protein | |
| SFV_1373 | 3 | 20 | -0.339145 | tail fiber assembly protein | |
| SFV_1374 | 2 | 21 | -0.970594 | tail fiber protein | |
| SFV_1375 | 1 | 20 | -2.132448 | hypothetical protein | |
| SFV_1376 | 0 | 21 | -2.678964 | Iron transport protein, inner membrane | |
| SFV_1377 | 0 | 22 | -2.206252 | Iron transport protein | |
| SFV_1378 | 0 | 24 | -2.434064 | iron ABC transporter ATP-binding protein | |
| SFV_1379 | 1 | 24 | -2.216942 | Iron transport protein | |
| SFV_1380 | 2 | 26 | -0.752679 | integrase for prophage | |
| SFV_1381 | 3 | 25 | 0.074210 | IS1 encoded protein | |
| SFV_1382 | 6 | 24 | -0.673934 | IS1 ORF2 | |
| SFV_1383 | 6 | 24 | -1.111121 | ISSfl4 ORF1 | |
| SFV_1384 | 6 | 23 | -0.822565 | ISSfl4 ORF2 | |
| SFV_1385 | 6 | 23 | -1.443408 | ISSfl4 ORF3 | |
| SFV_1386 | 6 | 26 | -2.295247 | tail component of prophage | |
| SFV_1387 | 2 | 22 | -1.903246 | invasion plasmid antigen |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1379 | adhesinb | 331 | e-116 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1385 | RTXTOXIND | 41 | 7e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 23 | SFV_1427 | SFV_1444 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1427 | 2 | 20 | -1.456786 | dioxygenase subunit alpha | |
| SFV_1428 | 3 | 21 | -1.118575 | IS600 ORF1 | |
| SFV_1429 | 3 | 19 | -0.836897 | IS600 ORF2 | |
| SFV_1430 | 0 | 14 | -1.140437 | hypothetical protein | |
| SFV_1431 | 2 | 23 | -1.149128 | IS1 encoded protein | |
| SFV_1432 | 1 | 22 | -1.313189 | IS1 ORF2 | |
| SFV_1433 | 0 | 23 | -2.081300 | hypothetical protein | |
| SFV_1434 | 0 | 20 | -2.459554 | aldehyde reductase | |
| SFV_1435 | -1 | 18 | -2.398634 | hypothetical protein | |
| SFV_1436 | -1 | 19 | -3.490087 | glyceraldehyde-3-phosphate dehydrogenase | |
| SFV_1437 | 0 | 21 | -4.499613 | methionine sulfoxide reductase B | |
| SFV_1438 | 1 | 20 | -4.509129 | hypothetical protein | |
| SFV_1439 | 0 | 21 | -4.983091 | oxidoreductase | |
| SFV_1440 | 0 | 25 | -5.586028 | transport protein | |
| SFV_1442 | -1 | 24 | -5.963485 | aldolase | |
| SFV_1443 | -2 | 22 | -4.438795 | kinase | |
| SFV_1444 | -1 | 16 | -3.017572 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1435 | INVEPROTEIN | 29 | 0.021 | Salmonella/Shigella invasion protein E (InvE) signat... | |
>INVEPROTEIN#Salmonella/Shigella invasion protein E (InvE) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1440 | TCRTETB | 31 | 0.006 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 24 | SFV_1468 | SFV_1481 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1468 | 2 | 14 | 1.725299 | hypothetical protein | |
| SFV_1469 | 2 | 13 | 1.937990 | hypothetical protein | |
| SFV_1470 | 1 | 11 | 2.240958 | hypothetical protein | |
| SFV_1471 | 2 | 12 | 2.722529 | exonuclease III | |
| SFV_1473 | 2 | 13 | 2.352227 | arginine succinyltransferase | |
| SFV_1474 | 2 | 12 | 1.153077 | succinylglutamic semialdehyde dehydrogenase | |
| SFV_1476 | 0 | 14 | -0.984335 | succinylglutamate desuccinylase | |
| SFV_1477 | 1 | 15 | -2.304131 | periplasmic protein | |
| SFV_1478 | 2 | 16 | -2.479515 | hypothetical protein | |
| SFV_1479 | 1 | 19 | -3.084908 | nucleotide excision repair endonuclease | |
| SFV_1480 | 1 | 17 | -4.152427 | NAD synthetase | |
| SFV_1481 | 1 | 17 | -3.911330 | DNA-binding transcriptional activator OsmE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1474 | DNABINDINGHU | 31 | 0.002 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 25 | SFV_1526 | SFV_1554 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1526 | 0 | 15 | -3.386348 | electron transfer flavoprotein subunit YdiR | |
| SFV_1527 | 1 | 20 | -3.493364 | electron transfer flavoprotein YdiQ | |
| SFV_1528 | 1 | 24 | -4.436723 | AraC family transcriptional regulator | |
| SFV_1529 | 1 | 25 | -4.273497 | IS1 encoded protein | |
| SFV_1530 | 1 | 24 | -3.771389 | IS1 ORF2 | |
| SFV_1531 | 1 | 23 | -3.682185 | transcriptional regulator YdeO | |
| SFV_1532 | 2 | 22 | -1.989825 | oxidoreductase | |
| SFV_1533 | 4 | 27 | -1.868126 | fimbrial-like adhesin protein | |
| SFV_1534 | 2 | 25 | 0.912701 | IS1 encoded protein | |
| SFV_1535 | 1 | 22 | 0.116010 | IS1 ORF2 | |
| SFV_1536 | 0 | 23 | -0.495854 | IS600 ORF2 | |
| SFV_1537 | 0 | 23 | -0.376093 | hypothetical protein | |
| SFV_1541 | -1 | 23 | -1.187926 | **endonuclease of cryptic prophage | |
| SFV_1542 | -1 | 20 | -2.309533 | hypothetical protein | |
| SFV_1543 | -2 | 18 | -3.278063 | hypothetical protein | |
| SFV_1544 | -2 | 17 | -2.529342 | bifunctional antitoxin/transcriptional repressor | |
| SFV_1545 | -2 | 15 | -2.310173 | IS600 ORF2 | |
| SFV_1546 | -3 | 18 | -2.503071 | IS600 ORF1 | |
| SFV_1547 | 0 | 18 | -2.163885 | transport protein | |
| SFV_1548 | 0 | 17 | -1.765686 | oxidoreductase | |
| SFV_1549 | 1 | 19 | -1.953035 | hypothetical protein | |
| SFV_1550 | 2 | 21 | -2.253147 | hypothetical protein | |
| SFV_1551 | 0 | 19 | -1.895981 | 3-hydroxy acid dehydrogenase | |
| SFV_1552 | 0 | 17 | -1.978562 | dipeptidyl carboxypeptidase II | |
| SFV_1553 | 0 | 19 | -1.466354 | competence damage-inducible protein A | |
| SFV_1554 | 0 | 21 | -3.035645 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1547 | TCRTETB | 30 | 0.012 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1551 | DHBDHDRGNASE | 100 | 1e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 26 | SFV_1581 | SFV_1602 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1581 | -3 | 20 | -4.123253 | hypothetical protein | |
| SFV_1582 | -1 | 21 | -3.442758 | hypothetical protein | |
| SFV_1583 | 0 | 20 | -3.413251 | glutaminase | |
| SFV_1585 | 1 | 19 | -3.974172 | IS1 encoded protein | |
| SFV_1586 | 0 | 18 | -4.220862 | IS1 ORF2 | |
| SFV_1587 | 1 | 20 | -4.762773 | hypothetical protein | |
| SFV_1588 | 2 | 19 | -2.098656 | sugar efflux transporter | |
| SFV_1589 | 2 | 17 | -2.663991 | multiple drug resistance protein MarC | |
| SFV_1590 | 0 | 14 | -2.443812 | DNA-binding transcriptional repressor MarR | |
| SFV_1591 | 0 | 16 | -2.552711 | DNA-binding transcriptional activator MarA | |
| SFV_1592 | 1 | 17 | -1.606839 | hypothetical protein | |
| SFV_1593 | 0 | 19 | -1.629850 | O-acetylserine/cysteine export protein | |
| SFV_1594 | 1 | 21 | -1.152598 | transport protein | |
| SFV_1595 | 5 | 29 | 0.179609 | IS600 ORF2 | |
| SFV_1596 | 9 | 33 | -0.216336 | IS600 ORF1 | |
| SFV_1597 | 8 | 28 | -0.916817 | hypothetical protein | |
| SFV_1598 | 5 | 24 | -0.944003 | ISSfl4 ORF1 | |
| SFV_1599 | 4 | 20 | -0.553083 | IS629 ORF1 | |
| SFV_1600 | 3 | 17 | -0.172619 | IS629 ORF2 | |
| SFV_1602 | 3 | 15 | -0.504153 | integrase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1583 | BLACTAMASEA | 30 | 0.010 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1588 | TCRTETB | 53 | 7e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1594 | TCRTETA | 39 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 27 | SFV_1711 | SFV_1727 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1711 | 2 | 16 | -1.668765 | inner membrane protein | |
| SFV_1712 | 1 | 21 | -3.396547 | hypothetical protein | |
| SFV_1714 | -1 | 18 | -2.577103 | IS1 ORF2 | |
| SFV_1715 | -1 | 18 | -2.603024 | amino acid/amine transport protein | |
| SFV_1716 | -1 | 21 | -1.400301 | IS1 encoded protein | |
| SFV_1717 | -2 | 18 | -3.661675 | IS1 ORF2 | |
| SFV_1718 | -1 | 21 | -6.552207 | quinate/shikimate dehydrogenase | |
| SFV_1719 | -1 | 23 | -6.956244 | 3-dehydroquinate dehydratase | |
| SFV_1720 | 2 | 26 | -7.103134 | IS1 ORF2 | |
| SFV_1721 | 2 | 22 | -7.493559 | IS1 encoded protein | |
| SFV_1722 | 2 | 20 | -6.916873 | sulfatase | |
| SFV_1723 | 1 | 12 | -4.652407 | hypothetical protein | |
| SFV_1725 | 2 | 10 | -2.819881 | IS1 encoded protein | |
| SFV_1726 | 1 | 12 | -2.347493 | IS1 ORF2 | |
| SFV_1727 | 1 | 11 | -3.242262 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1715 | TCRTETB | 30 | 0.020 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 28 | SFV_1748 | SFV_1775 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1748 | 1 | 29 | -9.626324 | hypothetical protein | |
| SFV_1749 | 2 | 32 | -11.209452 | IS1 ORF2 | |
| SFV_1750 | 2 | 32 | -11.180865 | IS1 encoded protein | |
| SFV_1751 | 1 | 28 | -8.971903 | outer membrane porin protein | |
| SFV_1752 | 0 | 18 | -3.082112 | hypothetical protein | |
| SFV_1753 | -1 | 17 | -1.589961 | glycoprotein | |
| SFV_1754 | -1 | 16 | 1.071727 | IS1 encoded protein | |
| SFV_1755 | -1 | 15 | 1.632763 | IS1 ORF2 | |
| SFV_1756 | -1 | 15 | 0.825587 | nitrite extrusion protein 2 | |
| SFV_1757 | -1 | 14 | 1.366510 | cryptic nitrate reductase 2 subunit alpha | |
| SFV_1758 | 0 | 19 | 0.472667 | cryptic nitrate reductase 2 subunit beta | |
| SFV_1759 | 1 | 21 | 0.309924 | IS91 ORF2 | |
| SFV_1760 | 2 | 21 | 0.465121 | IS91 orf | |
| SFV_1761 | -1 | 19 | -0.299854 | DNA-binding transcriptional regulator | |
| SFV_1762 | -1 | 20 | 0.804403 | oxidoreductase | |
| SFV_1763 | 0 | 25 | -3.791261 | insertion element IS2 transposase InsD | |
| SFV_1764 | 0 | 19 | -3.613702 | insertion sequence 2 OrfA protein | |
| SFV_1766 | 0 | 18 | -2.861908 | hypothetical protein | |
| SFV_1767 | 0 | 20 | -1.909323 | hypothetical protein | |
| SFV_1768 | 1 | 20 | -2.185685 | hypothetical protein | |
| SFV_1769 | 2 | 16 | -2.576349 | acetyltransferase | |
| SFV_1770 | 2 | 14 | -0.687994 | gamma-aminobutyraldehyde dehydrogenase | |
| SFV_1771 | 3 | 15 | -0.841634 | transport system permease | |
| SFV_1773 | 1 | 17 | -1.806208 | IS91 orf | |
| SFV_1774 | -1 | 18 | -3.849224 | virulence protein | |
| SFV_1775 | -1 | 18 | -4.495896 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1751 | ECOLIPORIN | 472 | e-169 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 29 | SFV_1795 | SFV_1802 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1795 | -1 | 21 | -3.051888 | azoreductase | |
| SFV_1796 | -2 | 28 | -5.197732 | IS600 ORF1 | |
| SFV_1797 | -1 | 26 | -4.716076 | IS600 ORF2 | |
| SFV_1799 | -1 | 27 | -5.266850 | hypothetical protein | |
| SFV_1800 | -3 | 23 | -5.975825 | phosphatidate cytidiltransferase | |
| SFV_1801 | -3 | 18 | -3.554078 | hypothetical protein | |
| SFV_1802 | -2 | 17 | -3.473640 | hypothetical protein |
| 30 | SFV_1822 | SFV_1840 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1822 | -2 | 16 | -3.273341 | secretion protein | |
| SFV_1823 | -1 | 17 | -1.798427 | hypothetical protein | |
| SFV_1824 | 0 | 16 | -1.204051 | O-6-alkylguanine-DNA:cysteine-protein | |
| SFV_1825 | -1 | 15 | -3.516617 | fumarate/nitrate reduction transcriptional | |
| SFV_1826 | 0 | 14 | -4.202024 | universal stress protein UspE | |
| SFV_1827 | 1 | 16 | -5.001842 | hypothetical protein | |
| SFV_1828 | 0 | 15 | -4.162776 | IS911 ORF2 | |
| SFV_1829 | -1 | 17 | -4.755785 | IS911 ORF1 | |
| SFV_1830 | -1 | 16 | -4.622262 | hypothetical protein | |
| SFV_1831 | 1 | 18 | -3.788398 | transport periplasmic protein | |
| SFV_1833 | 2 | 25 | -2.674380 | IS600 ORF1 | |
| SFV_1834 | 2 | 27 | -4.153992 | IS600 ORF2 | |
| SFV_1836 | 3 | 28 | -5.110318 | host-nuclease inhibitor protein Gam | |
| SFV_1837 | 1 | 25 | -4.134779 | bacteriophage protein | |
| SFV_1838 | 0 | 26 | -3.688589 | IS600 ORF1 | |
| SFV_1839 | 0 | 25 | -3.583168 | IS600 ORF2 | |
| SFV_1840 | -1 | 27 | -3.928087 | phage integrase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1822 | RTXTOXIND | 64 | 2e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 31 | SFV_1865 | SFV_1903 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1865 | 2 | 21 | 2.166616 | Holliday junction resolvase | |
| SFV_1866 | 2 | 20 | -0.023095 | hypothetical protein | |
| SFV_1867 | 1 | 17 | 0.593849 | dATP pyrophosphohydrolase | |
| SFV_1868 | 1 | 17 | 0.916955 | aspartyl-tRNA synthetase | |
| SFV_1870 | 2 | 19 | 1.922114 | ISSfl2 ORF | |
| SFV_1871 | 3 | 18 | 1.564259 | hypothetical protein | |
| SFV_1872 | 4 | 21 | 2.212605 | invasion plasmid antigen | |
| SFV_1873 | 4 | 23 | 3.860077 | phage tail fiber protein | |
| SFV_1874 | 5 | 26 | 4.279340 | hypothetical protein | |
| SFV_1875 | 5 | 26 | 4.018078 | host specificity protein | |
| SFV_1876 | 7 | 25 | 4.024227 | tail component of prophage | |
| SFV_1877 | 7 | 25 | 3.707192 | tail assembly protein | |
| SFV_1878 | 5 | 25 | 3.193336 | minor tail protein | |
| SFV_1880 | 6 | 28 | 2.138401 | tail component of prophage | |
| SFV_1881 | 6 | 29 | 1.997491 | tail component of prophage | |
| SFV_1882 | 3 | 22 | 3.431476 | tail component of prophage | |
| SFV_1883 | 1 | 25 | 1.758350 | tail component of prophage | |
| SFV_1884 | 1 | 26 | 1.456939 | tail component of prophage | |
| SFV_1885 | 1 | 26 | 0.978492 | tail attachment protein | |
| SFV_1886 | 1 | 25 | 0.898709 | DNA-packaging protein | |
| SFV_1887 | 2 | 27 | 0.476181 | ISSfl2 ORF | |
| SFV_1892 | 2 | 26 | -1.083413 | ****Q antiterminator encoded by prophage | |
| SFV_1893 | 3 | 24 | 0.364745 | endonuclease encoded by cryptic prophage | |
| SFV_1894 | 5 | 27 | -2.566113 | bacteriophage protein | |
| SFV_1895 | 6 | 35 | -6.049646 | IS600 ORF1 | |
| SFV_1896 | 7 | 36 | -6.612015 | IS600 ORF2 | |
| SFV_1897 | 6 | 40 | -8.328070 | IS629 ORF2 | |
| SFV_1898 | 7 | 48 | -11.787004 | IS629 ORF1 | |
| SFV_1899 | 7 | 49 | -12.216146 | hypothetical protein | |
| SFV_1900 | 6 | 45 | -11.418933 | hypothetical protein | |
| SFV_1901 | 1 | 30 | -9.136101 | hypothetical protein | |
| SFV_1902 | -1 | 22 | -6.472032 | hypothetical protein | |
| SFV_1903 | 0 | 20 | -4.940233 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1873 | FLAGELLIN | 31 | 0.013 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1874 | ENTEROVIROMP | 138 | 5e-44 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| 32 | SFV_1965 | SFV_2066 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1965 | 2 | 12 | -1.747291 | flagella biosynthesis protein FliZ | |
| SFV_1966 | 0 | 11 | -1.558965 | flagellar biosynthesis sigma factor | |
| SFV_1967 | 0 | 12 | -1.586117 | flagellin | |
| SFV_1968 | -2 | 16 | 0.057680 | flagellar capping protein | |
| SFV_1969 | -1 | 14 | -0.210819 | flagellar protein FliS | |
| SFV_1970 | -2 | 12 | 0.185726 | flagellar biosynthesis protein FliT | |
| SFV_1971 | -1 | 11 | -1.494525 | cytoplasmic alpha-amylase | |
| SFV_1972 | 0 | 17 | -3.606362 | hypothetical protein | |
| SFV_1973 | 2 | 21 | -4.886217 | inner membrane protein | |
| SFV_1974 | 4 | 28 | -6.597706 | hypothetical protein | |
| SFV_1976 | 1 | 21 | -4.507356 | virulence protein | |
| SFV_1977 | 1 | 20 | -3.856241 | porin | |
| SFV_1978 | -1 | 17 | -0.009281 | regulator | |
| SFV_1979 | 0 | 17 | 2.981430 | multidrug efflux protein | |
| SFV_1980 | 0 | 18 | 3.945148 | flagellar hook-basal body protein FliE | |
| SFV_1982 | -1 | 17 | 3.386552 | flagellar motor switch protein G | |
| SFV_1983 | -2 | 16 | 3.281796 | flagellar assembly protein H | |
| SFV_1984 | -1 | 16 | 3.043309 | flagellum-specific ATP synthase | |
| SFV_1986 | -1 | 15 | 1.920597 | flagellar hook-length control protein | |
| SFV_1987 | -2 | 19 | 1.524592 | flagellar basal body protein FliL | |
| SFV_1988 | 0 | 16 | 0.229913 | flagellar motor switch protein FliM | |
| SFV_1989 | 1 | 17 | -2.626901 | flagellar motor switch protein FliN | |
| SFV_1990 | 1 | 18 | -3.434033 | flagellar biosynthesis protein FliO | |
| SFV_1991 | 0 | 20 | -4.329844 | flagellar biosynthesis protein FliP | |
| SFV_1992 | -1 | 17 | -3.625312 | flagellar biosynthesis protein FliQ | |
| SFV_1993 | -1 | 16 | -2.871941 | flagellar biosynthesis protein FliR | |
| SFV_1994 | -1 | 17 | -1.592102 | positive regulator for ctr capsule biosynthesis, | |
| SFV_1995 | 0 | 17 | 0.823025 | hypothetical protein | |
| SFV_1996 | 1 | 15 | 0.705184 | hypothetical protein | |
| SFV_1998 | 2 | 16 | 1.088913 | hypothetical protein | |
| SFV_1999 | 1 | 16 | 0.828364 | hypothetical protein | |
| SFV_2000 | 1 | 16 | 0.616910 | hypothetical protein | |
| SFV_2001 | 0 | 13 | -1.085022 | DNA mismatch endonuclease, patch repair protein | |
| SFV_2002 | 1 | 15 | -0.804047 | DNA cytosine methylase | |
| SFV_2003 | 2 | 20 | -0.927063 | hypothetical protein | |
| SFV_2004 | 4 | 24 | -2.090550 | ISEhe3 orfB | |
| SFV_2005 | 4 | 27 | -2.528506 | ISEhe3 orfA | |
| SFV_2006 | 4 | 24 | -1.969288 | outer membrane pore protein | |
| SFV_2007 | 0 | 22 | -1.037276 | insertion element IS2 transposase InsD | |
| SFV_2008 | 0 | 29 | -6.560394 | insertion sequence 2 OrfA protein | |
| SFV_2009 | 0 | 32 | -7.705471 | outer membrane protein | |
| SFV_2010 | -1 | 34 | -7.787317 | IS1 encoded protein | |
| SFV_2011 | -1 | 32 | -7.375788 | IS1 ORF2 | |
| SFV_2012 | 0 | 34 | -9.050884 | chaperone protein HchA | |
| SFV_2013 | 2 | 39 | -9.776519 | 2-component sensor protein | |
| SFV_2014 | 3 | 36 | -8.878280 | transcriptional regulatory protein YedW | |
| SFV_2015 | 5 | 32 | -6.948510 | hypothetical protein | |
| SFV_2017 | 5 | 29 | -5.691892 | sulfite oxidase subunit YedZ | |
| SFV_2018 | 7 | 28 | -4.953503 | hypothetical protein | |
| SFV_2019 | 7 | 29 | -3.671711 | hypothetical protein | |
| SFV_2020 | 6 | 28 | -3.668696 | prophage protein | |
| SFV_2021 | 6 | 27 | -2.304224 | invasion plasmid antigen | |
| SFV_2022 | 3 | 25 | -0.422575 | hypothetical protein | |
| SFV_2023 | 4 | 28 | -1.363137 | IS600 ORF2 | |
| SFV_2024 | 4 | 30 | -2.032780 | IS600 ORF1 | |
| SFV_2025 | 3 | 28 | -1.167267 | ISSfl4 ORF3 | |
| SFV_2026 | 1 | 22 | -0.658825 | ISSfl4 ORF3 | |
| SFV_2027 | 1 | 22 | 0.229663 | ISSfl4 ORF2 | |
| SFV_2028 | -1 | 25 | -1.335430 | ISSfl4 ORF1 | |
| SFV_2029 | 1 | 22 | -0.827737 | hypothetical protein | |
| SFV_2035 | -1 | 23 | -0.902532 | ****endonuclease encoded by cryptic prophage | |
| SFV_2036 | 0 | 23 | -0.750729 | hypothetical protein | |
| SFV_2037 | 1 | 25 | -1.214417 | hypothetical protein | |
| SFV_2038 | -1 | 28 | -4.432012 | hypothetical protein | |
| SFV_2039 | 0 | 26 | -4.728639 | IS1 ORF2 | |
| SFV_2040 | 0 | 26 | -4.350293 | hypothetical protein | |
| SFV_2041 | 0 | 24 | -3.637335 | IS1 ORF2 | |
| SFV_2042 | 1 | 25 | -4.530732 | IS1 encoded protein | |
| SFV_2043 | 2 | 25 | -4.626555 | integrase for prophage CP-933U | |
| SFV_2045 | 1 | 19 | -2.280233 | *hypothetical protein | |
| SFV_2047 | 0 | 17 | -1.495146 | *integrase | |
| SFV_2048 | -1 | 22 | -3.818934 | IS911 ORF2 | |
| SFV_2049 | -1 | 26 | -4.639296 | IS911 ORF1 | |
| SFV_2051 | -1 | 25 | -4.229533 | IS600 ORF1 | |
| SFV_2052 | -1 | 26 | -4.203996 | IS600 ORF2 | |
| SFV_2053 | -1 | 29 | -4.711351 | AMP nucleosidase | |
| SFV_2054 | 0 | 33 | -5.096262 | hypothetical protein | |
| SFV_2056 | 0 | 31 | -3.117956 | *hypothetical protein | |
| SFV_2057 | 1 | 29 | -2.325178 | hypothetical protein | |
| SFV_2059 | 2 | 29 | -2.274326 | *transcriptional regulator Cbl | |
| SFV_2060 | 4 | 34 | -4.470120 | nitrogen assimilation transcriptional regulator | |
| SFV_2062 | 4 | 34 | -4.804710 | *hypothetical protein | |
| SFV_2063 | 4 | 31 | -4.214153 | nicotinate-nucleotide--dimethylbenzimidazole | |
| SFV_2064 | 4 | 30 | -4.689030 | cobalamin synthase | |
| SFV_2065 | 1 | 25 | -4.830834 | adenosylcobinamide kinase | |
| SFV_2066 | 1 | 25 | -4.947365 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1967 | FLAGELLIN | 234 | 9e-73 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1968 | TYPE3OMBPROT | 32 | 0.005 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1973 | RTXTOXIND | 30 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1974 | PF01206 | 93 | 6e-29 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1977 | ECOLIPORIN | 508 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1978 | HTHFIS | 28 | 0.032 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1980 | FLGHOOKFLIE | 117 | 8e-38 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1982 | FLGMOTORFLIG | 310 | e-107 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1983 | FLGFLIH | 373 | e-135 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1986 | FLGHOOKFLIK | 468 | e-168 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1988 | FLGMOTORFLIM | 382 | e-135 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1989 | FLGMOTORFLIN | 210 | 6e-74 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1991 | FLGBIOSNFLIP | 333 | e-119 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1992 | TYPE3IMQPROT | 67 | 1e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1993 | TYPE3IMRPROT | 203 | 4e-67 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2002 | PF05272 | 29 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2003 | CARBMTKINASE | 34 | 9e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2005 | HTHFIS | 27 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2006 | ECOLIPORIN | 294 | e-100 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2009 | ECOLIPORIN | 75 | 5e-20 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2013 | PF06580 | 35 | 4e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2014 | HTHFIS | 84 | 9e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2020 | LUXSPROTEIN | 31 | 0.002 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2026 | RTXTOXIND | 36 | 9e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2029 | FLAGELLIN | 25 | 0.029 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 33 | SFV_2079 | SFV_2095 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2079 | -1 | 23 | 3.405260 | ATP phosphoribosyltransferase | |
| SFV_2080 | 0 | 22 | 3.066319 | histidinol dehydrogenase | |
| SFV_2081 | 0 | 25 | 1.971750 | histidinol-phosphate aminotransferase | |
| SFV_2082 | -1 | 18 | 0.008887 | imidazole glycerol-phosphate | |
| SFV_2083 | -1 | 17 | -0.602541 | imidazole glycerol phosphate synthase subunit | |
| SFV_2084 | -2 | 15 | -3.273403 | 1-(5-phosphoribosyl)-5-[(5- | |
| SFV_2085 | 1 | 22 | -8.645971 | imidazole glycerol phosphate synthase subunit | |
| SFV_2086 | 3 | 31 | -11.834139 | bifunctional phosphoribosyl-AMP | |
| SFV_2087 | 4 | 39 | -14.080666 | regulator of length of O-antigen component of | |
| SFV_2089 | 6 | 47 | -16.073876 | 6-phosphogluconate dehydrogenase | |
| SFV_2090 | 7 | 61 | -19.818779 | hypothetical protein | |
| SFV_2091 | 6 | 57 | -18.208448 | O-antigen polymerase | |
| SFV_2092 | 4 | 49 | -14.147066 | dTDP-rhamnosyl transferase | |
| SFV_2093 | 2 | 44 | -11.627623 | dTDP-rhamnosyl transferase | |
| SFV_2094 | 1 | 33 | -8.721022 | polysaccharide biosynthesis protein | |
| SFV_2095 | -1 | 18 | -4.294814 | dTDP-6-deoxy-L-mannose-dehydrogenase |
| 34 | SFV_2130 | SFV_2164 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2130 | -3 | 13 | 3.869165 | chaperone | |
| SFV_2131 | -2 | 16 | 4.263998 | 3-methyl-adenine DNA glycosylase | |
| SFV_2133 | -2 | 17 | 4.221739 | ISSfl2 ORF | |
| SFV_2134 | -1 | 18 | 3.822803 | multidrug efflux system subunit MdtA | |
| SFV_2135 | -1 | 19 | 3.941273 | hypothetical protein | |
| SFV_2136 | -1 | 19 | 3.495642 | hypothetical protein | |
| SFV_2137 | -1 | 18 | 3.248280 | multidrug efflux system subunit MdtC | |
| SFV_2138 | -2 | 11 | 1.138895 | multidrug ABC transporter | |
| SFV_2139 | -1 | 9 | -0.100962 | signal transduction histidine-protein kinase | |
| SFV_2140 | 1 | 11 | -1.817726 | DNA-binding transcriptional regulator BaeR | |
| SFV_2141 | 3 | 13 | -2.042244 | hypothetical protein | |
| SFV_2142 | 3 | 14 | -2.263727 | hypothetical protein | |
| SFV_2143 | 5 | 21 | -3.949648 | hypothetical protein | |
| SFV_2144 | 4 | 19 | -2.502134 | lipid kinase | |
| SFV_2145 | 3 | 15 | -2.158093 | galactitol utilization operon repressor | |
| SFV_2147 | 2 | 12 | -1.687952 | PTS system galactitol-specific enzyme IIC | |
| SFV_2148 | 1 | 12 | -0.927517 | PTS system galactitol-specific transporter | |
| SFV_2150 | 2 | 13 | -0.539758 | tagatose 6-phosphate kinase 1 | |
| SFV_2151 | 1 | 12 | -0.450889 | tagatose-bisphosphate aldolase | |
| SFV_2152 | 1 | 14 | -0.118187 | fructose-bisphosphate aldolase | |
| SFV_2153 | 1 | 13 | 0.308512 | nucleoside permease | |
| SFV_2155 | 1 | 15 | 0.672995 | kinase | |
| SFV_2156 | 0 | 15 | -0.315891 | transcriptional regulator | |
| SFV_2157 | 0 | 16 | -0.393224 | hypothetical protein | |
| SFV_2158 | 4 | 23 | -2.407748 | phosphomethylpyrimidine kinase | |
| SFV_2159 | 3 | 25 | -5.034402 | hydroxyethylthiazole kinase | |
| SFV_2160 | 3 | 26 | -6.993321 | hypothetical protein | |
| SFV_2161 | 3 | 26 | -6.417797 | nickel/cobalt efflux protein RcnA | |
| SFV_2162 | 3 | 30 | -7.318321 | hypothetical protein | |
| SFV_2163 | 2 | 30 | -8.061563 | type-1 fimbrial protein | |
| SFV_2164 | 0 | 21 | -5.123288 | outer membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2130 | SHAPEPROTEIN | 50 | 8e-09 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2134 | RTXTOXIND | 44 | 5e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2135 | ACRIFLAVINRP | 722 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2136 | ACRIFLAVINRP | 186 | 2e-57 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2137 | ACRIFLAVINRP | 906 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2138 | TCRTETB | 113 | 2e-29 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2139 | BCTERIALGSPF | 31 | 0.009 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2140 | HTHFIS | 76 | 6e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2143 | LIPOLPP20 | 27 | 0.026 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2153 | TCRTETA | 35 | 5e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2162 | TYPE3OMGPROT | 26 | 0.029 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2163 | BINARYTOXINB | 28 | 0.045 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2164 | PF00577 | 713 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 35 | SFV_2176 | SFV_2203 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2176 | 0 | 14 | -3.412511 | hypothetical protein | |
| SFV_2177 | -1 | 13 | -2.551299 | IS1 ORF2 | |
| SFV_2178 | 0 | 13 | -1.634251 | IS1 encoded protein | |
| SFV_2179 | -1 | 13 | -1.901546 | hypothetical protein | |
| SFV_2180 | -1 | 14 | -1.203122 | hypothetical protein | |
| SFV_2181 | 0 | 16 | -2.278179 | two-component response-regulatory protein YehT | |
| SFV_2182 | 3 | 22 | -2.720774 | 2-component sensor protein | |
| SFV_2183 | 7 | 25 | -2.815498 | IS4 orf | |
| SFV_2184 | 6 | 27 | -2.732368 | DNA damage-inducible protein | |
| SFV_2185 | 6 | 28 | -2.601302 | hypothetical protein | |
| SFV_2186 | 4 | 27 | -2.779338 | prophage protein | |
| SFV_2187 | 4 | 26 | -1.313356 | invasion plasmid antigen | |
| SFV_2188 | 3 | 25 | -0.766792 | hypothetical protein | |
| SFV_2189 | 3 | 28 | -0.887536 | tail fiber protein | |
| SFV_2190 | 1 | 25 | -2.318838 | tail fiber assembly protein | |
| SFV_2191 | 2 | 25 | -0.802552 | IS1 encoded protein | |
| SFV_2192 | 2 | 25 | -0.201870 | IS1 ORF2 | |
| SFV_2193 | 1 | 24 | -0.683859 | fimbrial-like protein | |
| SFV_2194 | 0 | 25 | -1.555030 | IS1 ORF2 | |
| SFV_2196 | 0 | 25 | -1.545115 | bacteriophage protein | |
| SFV_2195 | 2 | 25 | -0.569220 | hypothetical protein | |
| SFV_2197 | 3 | 25 | -1.813260 | IS600 ORF2 | |
| SFV_2198 | 1 | 22 | -0.740400 | IS600 ORF1 | |
| SFV_2199 | -1 | 19 | 0.665633 | integrase | |
| SFV_2201 | 0 | 18 | 3.595239 | IS629 ORF1 | |
| SFV_2202 | 1 | 17 | 3.515730 | IS629 ORF2 | |
| SFV_2203 | 0 | 16 | 3.162769 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2179 | INTIMIN | 28 | 0.015 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2181 | HTHFIS | 71 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2182 | PF06580 | 221 | 1e-69 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2186 | LUXSPROTEIN | 31 | 0.002 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2189 | FLAGELLIN | 30 | 0.024 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2193 | FIMBRIALPAPE | 28 | 0.012 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| 36 | SFV_2269 | SFV_2280 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2269 | 0 | 20 | 3.291152 | transcriptional regulator NarP | |
| SFV_2270 | 0 | 22 | 3.649265 | subunit of heme lyase | |
| SFV_2271 | 1 | 21 | 3.912639 | disulfide oxidoreductase | |
| SFV_2272 | 0 | 18 | 4.063739 | cytochrome c-type biogenesis protein | |
| SFV_2273 | 0 | 15 | 2.665006 | cytochrome c-type biogenesis protein CcmE | |
| SFV_2274 | 1 | 16 | 2.858524 | heme exporter protein C | |
| SFV_2275 | 0 | 15 | 2.984870 | heme exporter protein C | |
| SFV_2276 | -1 | 17 | 3.659528 | heme exporter protein B, cytochrome c-type | |
| SFV_2277 | -1 | 19 | 3.802300 | cytochrome c biogenesis protein CcmA | |
| SFV_2278 | -1 | 21 | 3.783775 | cytochrome c-type protein NapC | |
| SFV_2279 | -1 | 19 | 3.681506 | citrate reductase cytochrome c-type subunit | |
| SFV_2280 | -1 | 17 | 3.088263 | quinol dehydrogenase membrane component |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2269 | HTHFIS | 63 | 7e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 37 | SFV_2320 | SFV_2350 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2320 | 2 | 19 | -2.248112 | hypothetical protein | |
| SFV_2321 | 1 | 20 | -2.154672 | hypothetical protein | |
| SFV_2322 | 1 | 18 | -1.525653 | protein induced by aluminum | |
| SFV_2323 | 0 | 16 | -0.713216 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate | |
| SFV_2324 | 1 | 15 | -1.011716 | undecaprenyl phosphate | |
| SFV_2325 | 0 | 13 | 0.268159 | bifunctional UDP-glucuronic acid | |
| SFV_2326 | 1 | 15 | 1.787040 | hypothetical protein | |
| SFV_2327 | 0 | 12 | 2.163341 | 4-amino-4-deoxy-L-arabinose transferase | |
| SFV_2328 | 0 | 14 | 3.645351 | sucrose-6 phosphate hydrolase | |
| SFV_2329 | 0 | 14 | 4.059623 | hypothetical protein | |
| SFV_2331 | 0 | 14 | 4.018807 | O-succinylbenzoic acid--CoA ligase | |
| SFV_2332 | 0 | 13 | 3.761426 | O-succinylbenzoate synthase | |
| SFV_2333 | -1 | 13 | 2.542206 | naphthoate synthase | |
| SFV_2334 | 0 | 13 | 1.749032 | acyl-CoA thioester hydrolase | |
| SFV_2335 | 0 | 13 | 1.079253 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- | |
| SFV_2336 | -1 | 18 | -0.669757 | menaquinone-specific isochorismate synthase | |
| SFV_2337 | 0 | 22 | -2.208960 | hypothetical protein | |
| SFV_2338 | 0 | 14 | 0.198191 | hypothetical protein | |
| SFV_2339 | 0 | 16 | 1.472755 | ribonuclease Z | |
| SFV_2340 | 2 | 23 | 3.102075 | IS1 encoded protein | |
| SFV_2341 | 2 | 25 | 3.369870 | IS1 ORF2 | |
| SFV_2342 | 1 | 26 | 3.449787 | hypothetical protein | |
| SFV_2343 | 1 | 29 | 3.858808 | NADH dehydrogenase subunit N | |
| SFV_2344 | 1 | 29 | 3.244563 | NADH dehydrogenase subunit M | |
| SFV_2345 | 0 | 29 | 3.753058 | NADH dehydrogenase subunit L | |
| SFV_2346 | 0 | 29 | 3.553812 | NADH dehydrogenase subunit K | |
| SFV_2347 | 0 | 29 | 3.598054 | NADH dehydrogenase subunit J | |
| SFV_2348 | 1 | 28 | 3.806265 | NADH dehydrogenase subunit I | |
| SFV_2349 | 0 | 27 | 3.618633 | NADH dehydrogenase subunit H | |
| SFV_2350 | 1 | 25 | 3.647820 | NADH dehydrogenase subunit G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2323 | TYPE3IMSPROT | 29 | 0.037 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2325 | NUCEPIMERASE | 114 | 4e-30 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2328 | BCTERIALGSPC | 29 | 0.003 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2331 | ALARACEMASE | 29 | 0.038 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2338 | AUTOINDCRSYN | 35 | 6e-05 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 38 | SFV_2400 | SFV_2431 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2400 | 0 | 21 | -4.041546 | N5-glutamine S-adenosyl-L-methionine-dependent | |
| SFV_2399 | 2 | 28 | -5.091141 | hypothetical protein | |
| SFV_2401 | 4 | 25 | -6.171482 | hypothetical protein | |
| SFV_2402 | 3 | 21 | -4.596883 | minor fimbrial subunit | |
| SFV_2403 | 0 | 14 | -2.380002 | minor fimbrial subunit | |
| SFV_2404 | -1 | 13 | -0.742682 | fimbrial protein | |
| SFV_2405 | -1 | 11 | -0.182943 | chaperone | |
| SFV_2407 | -1 | 14 | -0.240665 | fimbrial-like protein | |
| SFV_2408 | -1 | 15 | -2.432298 | phosphohistidine phosphatase | |
| SFV_2409 | 0 | 15 | -2.358725 | multifunctional fatty acid oxidation complex | |
| SFV_2410 | -1 | 17 | -3.447294 | 3-ketoacyl-CoA thiolase | |
| SFV_2411 | 1 | 18 | -5.550729 | hypothetical protein | |
| SFV_2412 | 2 | 19 | -5.086881 | long-chain fatty acid outer membrane | |
| SFV_2413 | 2 | 20 | -6.178173 | hypothetical protein | |
| SFV_2414 | 0 | 18 | -1.854391 | lipoprotein | |
| SFV_2415 | 2 | 19 | -1.081031 | transport protein | |
| SFV_2417 | 3 | 22 | -0.528496 | *integrase | |
| SFV_2418 | 3 | 21 | -0.116022 | IS911 ORF2 | |
| SFV_2419 | 4 | 23 | -0.453833 | IS911 ORF1 | |
| SFV_2420 | 3 | 21 | -0.310883 | aminoimidazole riboside kinase | |
| SFV_2421 | 1 | 21 | -2.611535 | IS4 orf | |
| SFV_2422 | 0 | 27 | -4.932313 | hypothetical protein | |
| SFV_2423 | -1 | 30 | -6.654773 | sucrose specific repressor | |
| SFV_2424 | 0 | 33 | -9.266823 | D-serine permease | |
| SFV_2425 | 0 | 34 | -9.108952 | D-serine dehydratase | |
| SFV_2426 | 1 | 36 | -10.039858 | multidrug resistance protein Y | |
| SFV_2427 | 1 | 36 | -9.175637 | multidrug resistance protein K | |
| SFV_2428 | 1 | 34 | -8.435580 | DNA-binding transcriptional activator EvgA | |
| SFV_2429 | 1 | 34 | -8.047413 | hybrid sensory histidine kinase in two-component | |
| SFV_2430 | 3 | 31 | -5.944946 | hypothetical protein | |
| SFV_2431 | 2 | 28 | -4.858982 | transporter YfdV |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2402 | FIMBRIALPAPE | 32 | 8e-04 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2403 | FIMBRIALPAPF | 42 | 2e-07 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2414 | VACJLIPOPROT | 407 | e-148 | VacJ lipoprotein signature. | |
>VACJLIPOPROT#VacJ lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2426 | TCRTETB | 119 | 3e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2427 | RTXTOXIND | 77 | 1e-17 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2428 | HTHFIS | 50 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2429 | HTHFIS | 80 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 39 | SFV_2467 | SFV_2483 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2467 | 1 | 17 | -3.545731 | PTS system phosphohistidinoprotein-hexose | |
| SFV_2468 | 1 | 16 | -4.271586 | phosphoenolpyruvate-protein phosphotransferase | |
| SFV_2469 | -1 | 15 | -3.080727 | PTS system glucose-specific transporter subunit | |
| SFV_2470 | -1 | 17 | -0.251891 | pyridoxal kinase | |
| SFV_2471 | -1 | 18 | 0.836573 | hypothetical protein | |
| SFV_2472 | 0 | 19 | 1.546491 | hypothetical protein | |
| SFV_2473 | -1 | 21 | 2.780313 | hypothetical protein | |
| SFV_2474 | -1 | 23 | 3.611950 | cysteine synthase B | |
| SFV_2475 | 0 | 22 | 3.172093 | sulfate/thiosulfate transporter subunit | |
| SFV_2476 | 0 | 21 | 2.155451 | sulfate/thiosulfate transporter permease | |
| SFV_2477 | 0 | 17 | 2.320324 | sulfate/thiosulfate transporter subunit | |
| SFV_2478 | 0 | 17 | 2.511116 | thiosulfate transporter subunit | |
| SFV_2479 | 0 | 17 | 2.372711 | short chain dehydrogenase | |
| SFV_2480 | 1 | 17 | 2.170979 | hypothetical protein | |
| SFV_2481 | 0 | 14 | 2.006043 | N-acetylmuramic acid-6-phosphate etherase | |
| SFV_2482 | 1 | 15 | 1.430696 | PTS system N-acetylmuramic acid transporter | |
| SFV_2483 | 2 | 16 | 0.739100 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2468 | PHPHTRNFRASE | 748 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2475 | PF05272 | 34 | 7e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2479 | DHBDHDRGNASE | 153 | 1e-47 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 40 | SFV_2492 | SFV_2499 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2492 | 0 | 25 | -3.835665 | hypothetical protein | |
| SFV_2493 | 0 | 23 | -5.294621 | IS1 ORF2 | |
| SFV_2494 | 5 | 39 | -9.464372 | hypothetical protein | |
| SFV_2495 | 5 | 42 | -10.845041 | hypothetical protein | |
| SFV_2496 | 5 | 40 | -10.035950 | hypothetical protein | |
| SFV_2497 | 4 | 37 | -8.070379 | hypothetical protein | |
| SFV_2498 | 4 | 37 | -7.464535 | hypothetical protein | |
| SFV_2499 | 1 | 23 | -3.245251 | amino acid antiporter |
| 41 | SFV_2563 | SFV_2576 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2563 | -2 | 14 | 3.064222 | cytoskeletal protein RodZ | |
| SFV_2564 | 0 | 14 | 2.064978 | ribosomal RNA large subunit methyltransferase N | |
| SFV_2565 | -1 | 13 | 2.822722 | nucleoside diphosphate kinase | |
| SFV_2566 | -1 | 13 | 2.854860 | peptidoglycan protein | |
| SFV_2567 | 0 | 16 | 1.868516 | ISSfl2 ORF | |
| SFV_2568 | -1 | 14 | 2.659968 | ISSfl2 ORF | |
| SFV_2570 | 0 | 16 | 2.370115 | enhanced serine sensitivity protein SseB | |
| SFV_2571 | 0 | 19 | 3.323572 | aminopeptidase | |
| SFV_2572 | 2 | 21 | 2.372081 | hypothetical protein | |
| SFV_2573 | 2 | 25 | 2.228277 | [2FE-2S] ferredoxin, electron carrer protein | |
| SFV_2574 | 2 | 26 | 2.290528 | chaperone protein HscA | |
| SFV_2575 | 1 | 25 | 0.740466 | co-chaperone HscB | |
| SFV_2576 | 2 | 29 | 1.068582 | iron-sulfur cluster assembly protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2563 | IGASERPTASE | 28 | 0.044 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2570 | STREPKINASE | 30 | 0.013 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2574 | SHAPEPROTEIN | 114 | 9e-30 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 42 | SFV_2608 | SFV_2618 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2608 | 2 | 23 | -1.628846 | hypothetical protein | |
| SFV_2609 | 3 | 24 | -2.121622 | DNA-binding transcriptional regulator | |
| SFV_2610 | 4 | 27 | -2.497896 | DNA-invertase | |
| SFV_2611 | 4 | 28 | -2.258935 | invasion plasmid antigen | |
| SFV_2612 | 2 | 22 | 0.285424 | hypothetical protein | |
| SFV_2613 | 2 | 22 | -0.205835 | tail fiber protein | |
| SFV_2614 | 2 | 22 | -1.032253 | tail fiber assembly protein | |
| SFV_2615 | 3 | 24 | -0.455172 | IS1 encoded protein | |
| SFV_2616 | 2 | 23 | -0.445478 | insertion sequence 2 OrfA protein | |
| SFV_2617 | 3 | 23 | -0.409718 | IS2 ORF2 | |
| SFV_2618 | 2 | 24 | -0.859392 | tail fiber protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2610 | STREPKINASE | 28 | 0.020 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. | |||||
| 43 | SFV_2675 | SFV_2734 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2675 | 2 | 24 | -2.568458 | CTP synthetase | |
| SFV_2676 | 2 | 25 | -3.184211 | phosphopyruvate hydratase | |
| SFV_2677 | 1 | 14 | -2.343768 | hypothetical protein | |
| SFV_2678 | 1 | 13 | 0.580214 | hypothetical protein | |
| SFV_2679 | 2 | 13 | 1.201387 | IS1 ORF2 | |
| SFV_2680 | 2 | 15 | -0.278910 | IS1 ORF2 | |
| SFV_2681 | 1 | 16 | -0.322697 | hypothetical protein | |
| SFV_2682 | 2 | 19 | -0.297510 | transport protein | |
| SFV_2683 | 1 | 27 | -1.243508 | transport protein | |
| SFV_2684 | 2 | 30 | -2.083336 | flavoprotein | |
| SFV_2686 | 4 | 34 | -2.944523 | integrase | |
| SFV_2687 | 3 | 31 | -2.105199 | IS600 ORF2 | |
| SFV_2688 | 2 | 30 | -2.578235 | IS600 ORF1 | |
| SFV_2689 | 2 | 31 | -2.161979 | bacteriophage protein | |
| SFV_2690 | 2 | 30 | -2.609766 | bacteriophage protein | |
| SFV_2691 | 1 | 26 | -2.180510 | recombination protein | |
| SFV_2693 | 2 | 22 | -1.309991 | hypothetical protein | |
| SFV_2692 | 2 | 21 | -1.269831 | bacteriophage protein | |
| SFV_2694 | 2 | 21 | -1.125497 | hypothetical protein | |
| SFV_2695 | 3 | 22 | -1.319421 | hypothetical protein | |
| SFV_2696 | 3 | 22 | -1.191605 | replication protein DnaC | |
| SFV_2697 | 3 | 22 | -1.115639 | helicase | |
| SFV_2698 | 2 | 26 | -1.854049 | bacteriophage protein | |
| SFV_2699 | 3 | 27 | -1.364629 | bacteriophage protein | |
| SFV_2704 | 2 | 27 | -1.460534 | ****hypothetical protein | |
| SFV_2705 | 3 | 27 | -1.722448 | hypothetical protein | |
| SFV_2706 | 2 | 25 | -0.434606 | lysozyme | |
| SFV_2707 | 3 | 25 | 0.013390 | endopeptidase | |
| SFV_2708 | 2 | 22 | -0.463451 | IS600 ORF2 | |
| SFV_2709 | 2 | 22 | -0.423722 | IS600 ORF1 | |
| SFV_2710 | 2 | 23 | -0.693142 | IS600 ORF1 | |
| SFV_2711 | 2 | 21 | -0.616810 | IS629 ORF2 | |
| SFV_2712 | 1 | 23 | -0.111422 | IS629 ORF1 | |
| SFV_2713 | 1 | 24 | 0.243380 | IS600 ORF1 | |
| SFV_2714 | 2 | 23 | 2.115183 | IS600 ORF2 | |
| SFV_2715 | 2 | 24 | 2.560953 | terminase small subunit | |
| SFV_2716 | 2 | 25 | 2.924727 | DNA packaging protein of prophage | |
| SFV_2717 | 1 | 28 | 4.471792 | head-tail preconnector gp5 | |
| SFV_2718 | 2 | 28 | 4.122938 | head-tail preconnector gp5 | |
| SFV_2719 | 4 | 26 | 3.934885 | head-tail preconnector gp5 | |
| SFV_2720 | 4 | 28 | 2.222539 | capsid protein small subunit | |
| SFV_2721 | 4 | 23 | 2.301984 | major capsid protein | |
| SFV_2722 | 6 | 26 | 2.225895 | DNA-packaging protein | |
| SFV_2723 | 7 | 26 | 2.366362 | tail attachment protein | |
| SFV_2724 | 6 | 24 | 3.079513 | tail component of prophage | |
| SFV_2725 | 7 | 25 | 3.707192 | tail component of prophage | |
| SFV_2726 | 7 | 25 | 4.024227 | tail component of prophage | |
| SFV_2727 | 5 | 26 | 4.018078 | tail component of prophage | |
| SFV_2728 | 5 | 26 | 4.279340 | tail component of prophage | |
| SFV_2730 | 4 | 24 | 3.991239 | minor tail protein | |
| SFV_2731 | 4 | 24 | 3.873466 | tail assembly protein | |
| SFV_2732 | 3 | 19 | 2.447125 | tail component of prophage | |
| SFV_2733 | 3 | 18 | 2.324878 | host specificity protein | |
| SFV_2734 | 2 | 18 | 1.508154 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2677 | cloacin | 33 | 0.001 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2682 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2689 | PF05272 | 55 | 2e-09 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2699 | DNABINDNGFIS | 30 | 3e-04 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2734 | ENTEROVIROMP | 138 | 5e-44 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| 44 | SFV_2773 | SFV_2781 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2773 | 2 | 20 | 3.078331 | hypothetical protein | |
| SFV_2774 | 2 | 20 | 2.746532 | hydrogenase isoenzyme HypD | |
| SFV_2775 | 2 | 23 | 3.782305 | hydrogenase assembly chaperone | |
| SFV_2776 | 2 | 23 | 4.257915 | hydrogenase nickel incorporation protein HypB | |
| SFV_2777 | 0 | 25 | 4.630314 | hydrogenase nickel incorporation protein | |
| SFV_2778 | -1 | 27 | 4.720242 | formate hydrogenlyase regulatory protein HycA | |
| SFV_2779 | -1 | 26 | 5.201472 | small subunit of hydrogenase-3, iron-sulfur | |
| SFV_2780 | -1 | 27 | 4.913785 | formate hydrogenlyase subunit 3 | |
| SFV_2781 | 0 | 28 | 4.225042 | hydrogenase 3 membrane-spanning protein |
| 45 | SFV_2825 | SFV_2851 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2825 | 2 | 13 | -0.269959 | glycine betaine transporter membrane protein | |
| SFV_2826 | 2 | 15 | -1.351581 | glycine betaine transporter ATP-binding subunit | |
| SFV_2827 | 2 | 13 | -0.570792 | ribonucleotide-diphosphate reductase subunit | |
| SFV_2828 | 1 | 14 | -0.152699 | ribonucleotide-diphosphate reductase subunit | |
| SFV_2829 | 3 | 21 | -1.167571 | ribonucleotide reductase stimulatory protein | |
| SFV_2830 | 1 | 25 | -3.158321 | glutaredoxin-like protein | |
| SFV_2831 | 1 | 24 | -3.030657 | hypothetical protein | |
| SFV_2832 | 1 | 24 | -3.681132 | hypothetical protein | |
| SFV_2833 | -1 | 19 | -3.496301 | hypothetical protein | |
| SFV_2834 | -1 | 18 | -2.392492 | DNA binding protein, nucleoid-associated | |
| SFV_2835 | 3 | 17 | -1.489612 | hypothetical protein | |
| SFV_2836 | 2 | 16 | 1.687985 | hypothetical protein | |
| SFV_2837 | 2 | 17 | 2.619277 | hypothetical protein | |
| SFV_2838 | 0 | 15 | 2.211425 | LysM domain/BON superfamily protein | |
| SFV_2839 | 1 | 13 | -2.114758 | DNA-binding transcriptional regulator CsiR | |
| SFV_2840 | 1 | 12 | -1.842198 | gamma-aminobutyrate transporter | |
| SFV_2841 | -1 | 12 | -2.061221 | 4-aminobutyrate aminotransferase | |
| SFV_2843 | -2 | 16 | -3.721754 | hydroxyglutarate oxidase | |
| SFV_2844 | 0 | 23 | -5.945323 | hypothetical protein | |
| SFV_2845 | 2 | 29 | -6.411865 | hypothetical protein | |
| SFV_2847 | 2 | 21 | -0.679921 | *IS3 ORF2 | |
| SFV_2848 | 2 | 22 | -1.854959 | IS3 ORF1 | |
| SFV_2849 | 2 | 21 | -1.921137 | IS1 ORF2 | |
| SFV_2850 | 2 | 19 | -1.531965 | IS1 encoded protein | |
| SFV_2851 | 2 | 16 | -1.539326 | integrase |
| 46 | SFV_3007 | SFV_3012 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3007 | 2 | 24 | -3.438402 | hypothetical protein | |
| SFV_3008 | 0 | 22 | -4.206693 | deoxyribonucleotide triphosphate | |
| SFV_3009 | 0 | 21 | -5.826734 | coproporphyrinogen III oxidase | |
| SFV_3010 | -1 | 20 | -5.940176 | hypothetical protein | |
| SFV_3011 | -1 | 16 | -4.778107 | hypothetical protein | |
| SFV_3012 | -2 | 13 | -4.096859 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3011 | ANTHRAXTOXNA | 29 | 0.012 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 47 | SFV_3155 | SFV_3161 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3155 | 0 | 14 | -3.970438 | formate acetyltransferase 3 | |
| SFV_3156 | 0 | 22 | -7.370958 | propionate/acetate kinase | |
| SFV_3157 | 1 | 26 | -9.836605 | threonine/serine transporter TdcC | |
| SFV_3158 | 3 | 34 | -10.385241 | threonine dehydratase | |
| SFV_3159 | 2 | 30 | -7.949086 | DNA-binding transcriptional activator TdcA | |
| SFV_3160 | 2 | 25 | -5.541552 | DNA-binding transcriptional activator TdcR | |
| SFV_3161 | 1 | 22 | -3.438123 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3156 | ACETATEKNASE | 533 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| 48 | SFV_3184 | SFV_3198 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3184 | 1 | 20 | 3.219495 | hypothetical protein | |
| SFV_3185 | -1 | 19 | 3.395519 | GIY-YIG nuclease superfamily protein | |
| SFV_3186 | -1 | 19 | 2.924285 | hypothetical protein | |
| SFV_3187 | -1 | 18 | 3.015882 | hypothetical protein | |
| SFV_3188 | -1 | 15 | 2.364567 | collagenase | |
| SFV_3189 | 1 | 22 | 1.880048 | hypothetical protein | |
| SFV_3190 | 1 | 26 | 1.620553 | hypothetical protein | |
| SFV_3191 | 1 | 28 | 1.187605 | tryptophan permease | |
| SFV_3192 | 4 | 33 | 1.121603 | ATP-dependent RNA helicase DeaD | |
| SFV_3193 | 5 | 33 | 0.622634 | lipoprotein NlpI | |
| SFV_3194 | 6 | 38 | 1.135788 | polynucleotide phosphorylase | |
| SFV_3195 | 6 | 32 | 0.553010 | 30S ribosomal protein S15 | |
| SFV_3196 | 4 | 29 | 0.542416 | tRNA pseudouridine synthase B | |
| SFV_3197 | 4 | 30 | 0.478841 | ribosome-binding factor A | |
| SFV_3198 | 3 | 27 | 0.814031 | translation initiation factor IF-2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3198 | TCRTETOQM | 73 | 2e-15 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 49 | SFV_3454 | SFV_3502 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3454 | 0 | 26 | 3.035141 | glycerol-3-phosphate transporter membrane | |
| SFV_3455 | -2 | 25 | 3.407635 | glycerol-3-phosphate transporter permease | |
| SFV_3456 | -1 | 23 | 3.201517 | glycerol-3-phosphate transporter periplasmic | |
| SFV_3457 | -1 | 21 | 3.680101 | leucine/isoleucine/valine transporter | |
| SFV_3458 | -1 | 21 | 3.163567 | leucine/isoleucine/valine transporter | |
| SFV_3459 | -2 | 23 | 3.145214 | leucine/isoleucine/valine transporter permease | |
| SFV_3460 | -1 | 22 | 2.586584 | branched-chain amino acid transporter permease | |
| SFV_3461 | 0 | 21 | 2.353185 | leucine-specific binding protein | |
| SFV_3462 | 0 | 20 | 2.294555 | hypothetical protein | |
| SFV_3463 | 0 | 20 | 1.590408 | Leu/Ile/Val-binding protein | |
| SFV_3464 | 0 | 17 | 1.143073 | RNA polymerase factor sigma-32 | |
| SFV_3465 | -1 | 14 | 1.540643 | cell division protein FtsX | |
| SFV_3466 | -1 | 15 | 3.558071 | cell division protein FtsE | |
| SFV_3468 | 0 | 16 | 3.491761 | 16S rRNA m(2)G966-methyltransferase | |
| SFV_3469 | 0 | 14 | 3.045706 | hypothetical protein | |
| SFV_3470 | -1 | 15 | 3.226960 | receptor | |
| SFV_3471 | -1 | 15 | 3.808768 | hypothetical protein | |
| SFV_3472 | 1 | 16 | 2.907061 | zinc/cadmium/mercury/lead-transporting ATPase | |
| SFV_3473 | 2 | 19 | 1.650204 | sulfur transfer protein SirA | |
| SFV_3474 | 1 | 16 | 1.553267 | hypothetical protein | |
| SFV_3475 | 1 | 17 | 2.550975 | hypothetical protein | |
| SFV_3476 | 1 | 18 | 3.603291 | major facilitator superfamily transporter | |
| SFV_3477 | 1 | 20 | 3.881759 | hypothetical protein | |
| SFV_3478 | 0 | 23 | 4.768091 | holo-(acyl carrier protein) synthase 2 | |
| SFV_3479 | 0 | 23 | 4.667670 | periplasmic binding protein for nickel | |
| SFV_3480 | 2 | 22 | 4.787060 | nickel transporter permease NikB | |
| SFV_3481 | 2 | 21 | 3.965357 | nickel transporter permease NikC | |
| SFV_3482 | 0 | 20 | 3.673435 | nickel transporter ATP-binding protein NikD | |
| SFV_3483 | 0 | 19 | 3.815173 | nickel transporter ATP-binding protein NikE | |
| SFV_3484 | -1 | 14 | -0.269039 | nickel responsive regulator | |
| SFV_3485 | 1 | 19 | -4.334806 | hypothetical protein | |
| SFV_3486 | 1 | 18 | -4.136670 | transporter | |
| SFV_3487 | 1 | 23 | -6.141802 | ABC transporter ATP-binding protein | |
| SFV_3488 | 1 | 38 | -11.707199 | hypothetical protein | |
| SFV_3489 | 3 | 45 | -14.560346 | hypothetical protein | |
| SFV_3490 | 4 | 42 | -13.091625 | hypothetical protein | |
| SFV_3491 | 3 | 36 | -9.125774 | hypothetical protein | |
| SFV_3492 | 3 | 33 | -7.204415 | hypothetical protein | |
| SFV_3493 | 3 | 32 | -5.941715 | hypothetical protein | |
| SFV_3494 | 3 | 30 | -5.361886 | hypothetical protein | |
| SFV_3495 | 1 | 28 | -4.626991 | fimbriae usher | |
| SFV_3496 | 0 | 25 | -3.970764 | insertion sequence 2 OrfA protein | |
| SFV_3497 | -1 | 25 | -3.958326 | insertion element IS2 transposase InsD | |
| SFV_3498 | 0 | 27 | -5.735099 | fimbrial protein remnant | |
| SFV_3499 | -1 | 17 | -3.003305 | periplasmic fimbrial chaperone protein | |
| SFV_3500 | 0 | 12 | -0.215158 | hypothetical protein | |
| SFV_3501 | 0 | 12 | 0.028289 | IS600 ORF1 | |
| SFV_3502 | 2 | 12 | 0.095141 | IS1 ORF2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3456 | MALTOSEBP | 39 | 2e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3470 | SHIGARICIN | 26 | 0.039 | Ribosome inactivating protein family signature. | |
>SHIGARICIN#Ribosome inactivating protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3473 | PF01206 | 105 | 3e-34 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3476 | TCRTETA | 53 | 8e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3483 | HTHFIS | 29 | 0.019 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3486 | ABC2TRNSPORT | 50 | 5e-09 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3487 | PF05272 | 30 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3488 | RTXTOXIND | 84 | 4e-20 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3495 | PF00577 | 264 | 9e-83 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3498 | PF00577 | 314 | e-102 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 50 | SFV_3514 | SFV_3529 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3514 | 0 | 23 | -5.692364 | arsenical pump membrane protein | |
| SFV_3515 | 2 | 31 | -8.848191 | arsenate reductase | |
| SFV_3516 | 3 | 34 | -10.282899 | IS1 encoded protein | |
| SFV_3517 | 2 | 33 | -10.757377 | IS1 ORF2 | |
| SFV_3518 | 4 | 37 | -12.032780 | hypothetical protein | |
| SFV_3519 | 2 | 32 | -12.462888 | hypothetical protein | |
| SFV_3520 | 2 | 24 | -11.192833 | outer membrane protein induced after carbon | |
| SFV_3521 | 1 | 20 | -9.543510 | hypothetical protein | |
| SFV_3523 | 2 | 22 | -7.853160 | acid-resistance protein | |
| SFV_3524 | 3 | 27 | -7.734534 | acid-resistance protein | |
| SFV_3525 | 3 | 27 | -7.305507 | acid-resistance membrane protein | |
| SFV_3526 | 3 | 27 | -7.798188 | hypothetical protein | |
| SFV_3528 | 2 | 24 | -4.637417 | IS1 ORF2 | |
| SFV_3529 | 0 | 23 | -4.221599 | IS150 ORF1(ORF A) |
| 51 | SFV_3602 | SFV_3607 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3602 | -1 | 14 | -3.533462 | formate dehydrogenase-O, iron-sulfur subunit | |
| SFV_3603 | 0 | 20 | -6.179885 | formate dehydrogenase-O subunit gamma | |
| SFV_3604 | 1 | 27 | -7.243881 | formate dehydrogenase accessory protein FdhE | |
| SFV_3605 | 0 | 36 | -9.243182 | hypothetical protein | |
| SFV_3606 | -1 | 27 | -6.240430 | hypothetical protein | |
| SFV_3607 | -1 | 24 | -4.803864 | hypothetical protein |
| 52 | SFV_3622 | SFV_3641 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3622 | 0 | 15 | -5.054425 | permease | |
| SFV_3623 | 0 | 20 | -6.248466 | permease | |
| SFV_3624 | 2 | 18 | -3.806683 | hypothetical protein | |
| SFV_3625 | 1 | 12 | -2.096272 | IS1 ORF2 | |
| SFV_3626 | 2 | 15 | -1.755234 | resistance protein | |
| SFV_3627 | 1 | 15 | -0.358471 | hypothetical protein | |
| SFV_3628 | 1 | 17 | 1.599531 | transcriptional regulator | |
| SFV_3629 | 1 | 18 | 1.857919 | IS4 orf | |
| SFV_3630 | 2 | 22 | 1.619915 | GTP-binding factor | |
| SFV_3631 | 0 | 16 | 1.662262 | glutamine synthetase | |
| SFV_3632 | 0 | 14 | 1.143962 | nitrogen regulation protein NR(II) | |
| SFV_3633 | 0 | 14 | 0.039151 | nitrogen regulation protein NR(I) | |
| SFV_3634 | 0 | 13 | -0.821196 | coproporphyrinogen III oxidase | |
| SFV_3635 | 0 | 14 | -1.526220 | hypothetical protein | |
| SFV_3636 | -2 | 13 | -1.883338 | ribosome biogenesis GTP-binding protein YsxC | |
| SFV_3637 | -2 | 14 | -2.347871 | DNA polymerase I | |
| SFV_3638 | -2 | 16 | -3.669334 | acyltransferase | |
| SFV_3639 | 0 | 17 | -2.852932 | IS1 ORF2 | |
| SFV_3641 | 0 | 16 | -3.045511 | periplasmic protein disulfide isomerase I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3622 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3624 | 60KDINNERMP | 26 | 0.037 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3630 | TCRTETOQM | 147 | 8e-40 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3632 | PF06580 | 28 | 0.042 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3633 | HTHFIS | 597 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3635 | SECA | 30 | 0.005 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 53 | SFV_3677 | SFV_3686 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3677 | 0 | 13 | -3.912479 | phospholipase A | |
| SFV_3678 | -1 | 14 | -4.504593 | hypothetical protein | |
| SFV_3679 | 1 | 15 | -3.120743 | hypothetical protein | |
| SFV_3680 | 2 | 15 | -3.884632 | hypothetical protein | |
| SFV_3681 | 0 | 12 | 0.791022 | hypothetical protein | |
| SFV_3682 | -1 | 14 | 2.278869 | magnesium/nickel/cobalt transporter CorA | |
| SFV_3683 | -2 | 15 | 2.488000 | hypothetical protein | |
| SFV_3684 | -2 | 16 | 2.900170 | IS4 orf | |
| SFV_3685 | -1 | 18 | 3.226711 | hypothetical protein | |
| SFV_3686 | -1 | 19 | 3.861308 | DNA-dependent helicase II |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3677 | PHPHLIPASEA1 | 499 | 0.0 | Bacterial phospholipase A1 protein signature. | |
>PHPHLIPASEA1#Bacterial phospholipase A1 protein signature. | |||||
| 54 | SFV_3755 | SFV_3761 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3755 | 3 | 36 | 1.813374 | glucosamine--fructose-6-phosphate | |
| SFV_3756 | 3 | 35 | 1.614587 | bifunctional N-acetylglucosamine-1-phosphate | |
| SFV_3757 | 4 | 39 | 1.668793 | ATP synthase F0F1 subunit epsilon | |
| SFV_3758 | 4 | 41 | 1.562770 | ATP synthase F0F1 subunit beta | |
| SFV_3759 | 3 | 33 | 0.485689 | ATP synthase F0F1 subunit gamma | |
| SFV_3760 | 4 | 34 | 0.226256 | ATP synthase F0F1 subunit alpha | |
| SFV_3761 | 2 | 19 | -1.086922 | ATP synthase F0F1 subunit delta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3756 | RTXTOXINA | 29 | 0.047 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 55 | SFV_3773 | SFV_3791 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3773 | 2 | 24 | -3.417985 | IS4 orf | |
| SFV_3774 | 2 | 22 | -4.085249 | major fimbrial subunit | |
| SFV_3775 | 1 | 17 | -3.088554 | insertion element IS2 transposase InsD | |
| SFV_3776 | 0 | 13 | -2.864654 | insertion sequence 2 OrfA protein | |
| SFV_3777 | 0 | 10 | -2.680163 | long polar fimbriae | |
| SFV_3778 | -1 | 20 | -1.227804 | fimbrial protein | |
| SFV_3779 | -3 | 21 | -0.110806 | phosphate ABC transporter periplasmic | |
| SFV_3780 | -1 | 14 | -0.158717 | phosphate transporter permease subunit PstC | |
| SFV_3781 | -1 | 12 | -1.442535 | phosphate transporter permease subunit PtsA | |
| SFV_3782 | -1 | 13 | -3.498442 | phosphate transporter ATP-binding protein | |
| SFV_3783 | 0 | 12 | -3.614678 | transcriptional regulator PhoU | |
| SFV_3784 | 1 | 14 | -3.875729 | transcriptional antiterminator BglG | |
| SFV_3785 | 1 | 14 | -3.504200 | PTS system beta-glucoside-specific transporter | |
| SFV_3786 | 1 | 13 | -3.616938 | phospho-beta-glucosidase B; cryptic | |
| SFV_3787 | 1 | 13 | -3.386947 | receptor protein | |
| SFV_3788 | 1 | 16 | -0.914117 | xylanase | |
| SFV_3789 | 3 | 20 | -0.953875 | 6-phosphogluconolactonase | |
| SFV_3790 | 3 | 24 | -1.717654 | hypothetical protein | |
| SFV_3791 | 2 | 21 | -1.257586 | ISSfl4 ORF3 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3777 | PF00577 | 755 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 56 | SFV_3833 | SFV_3838 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3833 | 3 | 14 | 2.375392 | hypothetical protein | |
| SFV_3834 | 2 | 15 | 2.647585 | hypothetical protein | |
| SFV_3835 | 1 | 17 | 3.407410 | hypothetical protein | |
| SFV_3836 | 1 | 17 | 4.089315 | transcriptional regulator | |
| SFV_3837 | 1 | 17 | 4.074032 | multidrug resistance protein D | |
| SFV_3838 | 0 | 16 | 3.311743 | acetolactate synthase catalytic subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3837 | TCRTETB | 60 | 7e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 57 | SFV_3847 | SFV_3865 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3847 | 2 | 15 | -0.283314 | ribonucleoside transporter | |
| SFV_3848 | 3 | 17 | 0.127330 | IS600 ORF1 | |
| SFV_3849 | 4 | 17 | 0.765189 | IS600 ORF2 | |
| SFV_3850 | 4 | 19 | 1.372708 | ferric siderophore receptor | |
| SFV_3851 | 4 | 19 | 0.595270 | lysine:N6-hydroxylase | |
| SFV_3852 | 4 | 19 | 1.801761 | siderophore biosynthesis protein | |
| SFV_3853 | 4 | 20 | 1.483515 | siderophore biosynthesis protein | |
| SFV_3854 | 3 | 21 | 1.204492 | siderophore biosynthesis protein | |
| SFV_3855 | 3 | 26 | 0.279212 | membrane transport protein | |
| SFV_3856 | 2 | 29 | -0.525105 | hypothetical protein | |
| SFV_3857 | 2 | 27 | 1.589154 | IS1 ORF2 | |
| SFV_3858 | 2 | 28 | 1.971099 | insertion sequence 2 OrfA protein | |
| SFV_3859 | 2 | 28 | 0.809265 | insertion element IS2 transposase InsD | |
| SFV_3860 | 1 | 26 | 0.126115 | insertion sequence 2 OrfA protein | |
| SFV_3861 | 0 | 26 | 1.357051 | insertion element IS2 transposase InsD | |
| SFV_3862 | 0 | 26 | 0.572679 | IS629 ORF1 | |
| SFV_3863 | 1 | 28 | -0.524750 | IS629 ORF2 | |
| SFV_3864 | 0 | 26 | -3.033119 | hypothetical protein | |
| SFV_3865 | 1 | 24 | -3.400169 | IS3 ORF1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3847 | TCRTETA | 38 | 5e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3852 | PF04183 | 816 | 0.0 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3854 | PF04183 | 338 | e-111 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3855 | TCRTETA | 48 | 5e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3865 | RTXTOXIND | 26 | 0.024 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 58 | SFV_3897 | SFV_3909 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3897 | 0 | 27 | -7.452921 | IS1 encoded protein | |
| SFV_3898 | 1 | 29 | -9.465997 | IS1 ORF2 | |
| SFV_3899 | 3 | 36 | -12.462660 | lipopolysaccharide core biosynthesis protein | |
| SFV_3900 | 2 | 42 | -14.282607 | LPS alpha1,3-glucosyltransferase | |
| SFV_3901 | 4 | 47 | -16.794685 | lipopolysaccharide core biosynthesis protein | |
| SFV_3902 | 4 | 47 | -15.999858 | Lipid A-core, surface polymer ligase | |
| SFV_3903 | 3 | 38 | -12.124373 | lipopolysaccharide core biosynthesis protein | |
| SFV_3904 | 2 | 28 | -9.455086 | lipopolysaccharide 1,2-glucosyltransferase | |
| SFV_3905 | 1 | 27 | -8.405804 | lipopolysaccharide 1,2-N- | |
| SFV_3906 | 0 | 16 | -5.151782 | lipid A-core, surface polymer ligase | |
| SFV_3907 | -1 | 12 | -1.909201 | ADP-heptose:LPS heptosyl transferase I | |
| SFV_3908 | 1 | 14 | -2.624396 | ADP-heptose:LPS heptosyltransferase II | |
| SFV_3909 | 0 | 16 | -3.158780 | ADP-L-glycero-D-manno-heptose-6-epimerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3902 | RTXTOXINA | 32 | 0.003 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3909 | NUCEPIMERASE | 104 | 7e-28 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 59 | SFV_3925 | SFV_3931 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3925 | 2 | 14 | 1.008950 | tRNA/rRNA methyltransferase YibK | |
| SFV_3926 | 1 | 14 | -0.404076 | L-lactate dehydrogenase | |
| SFV_3927 | 2 | 18 | -0.956433 | DNA-binding transcriptional repressor LldR | |
| SFV_3928 | 3 | 19 | -1.558233 | L-lactate permease | |
| SFV_3929 | 4 | 22 | -2.871854 | hypothetical protein | |
| SFV_3930 | 3 | 27 | -4.975808 | adhesin | |
| SFV_3931 | 0 | 24 | -5.090884 | inner membrane lipoprotein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3929 | PF03895 | 67 | 6e-16 | Serum resistance protein DsrA. | |
>PF03895#Serum resistance protein DsrA. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3930 | OMADHESIN | 63 | 5e-13 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| 60 | SFV_4002 | SFV_4010 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4002 | 2 | 13 | 2.607802 | ATP-dependent protease ATP-binding subunit HslU | |
| SFV_4003 | 3 | 13 | 2.900553 | ATP-dependent protease peptidase subunit | |
| SFV_4004 | 2 | 12 | 2.757031 | essential cell division protein FtsN | |
| SFV_4005 | 0 | 14 | 3.404212 | DNA-binding transcriptional regulator CytR | |
| SFV_4006 | 0 | 15 | 3.556964 | primosome assembly protein PriA | |
| SFV_4007 | -1 | 16 | 3.094437 | peptidoglycan peptidase | |
| SFV_4008 | -2 | 16 | 3.169390 | transcriptional repressor protein MetJ | |
| SFV_4009 | -2 | 15 | 3.184144 | cystathionine gamma-synthase | |
| SFV_4010 | -2 | 17 | 3.322170 | bifunctional aspartate kinase II/homoserine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4002 | HTHFIS | 30 | 0.017 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4004 | IGASERPTASE | 42 | 2e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 61 | SFV_4161 | SFV_4166 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4161 | 1 | 14 | -3.464337 | replicative DNA helicase | |
| SFV_4162 | 1 | 20 | -4.413732 | quinone oxidoreductase, NADPH-dependent | |
| SFV_4163 | 1 | 23 | -6.317623 | phage shock protein G | |
| SFV_4164 | 1 | 21 | -3.292885 | tRNA-dihydrouridine synthase A | |
| SFV_4165 | 1 | 21 | -3.796238 | hypothetical protein | |
| SFV_4166 | 2 | 18 | -0.811833 | hypothetical protein |
| 62 | SFV_4205 | SFV_4222 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4205 | 2 | 18 | -2.580225 | fructuronate transporter | |
| SFV_4206 | 2 | 23 | -3.078805 | FimH protein | |
| SFV_4207 | 1 | 23 | -2.998964 | minor fimbrial subunit | |
| SFV_4208 | 1 | 25 | -3.496060 | minor fimbrial subunit | |
| SFV_4209 | 0 | 27 | -4.241392 | Outer membrane usher protein fimD | |
| SFV_4210 | -1 | 28 | -5.550658 | periplasmic chaperone | |
| SFV_4211 | 0 | 28 | -6.081464 | IS1 ORF2 | |
| SFV_4213 | 1 | 30 | -6.307708 | major type 1 subunit fimbrin (pilin) | |
| SFV_4214 | 1 | 28 | -6.182623 | tyrosine recombinase | |
| SFV_4215 | 0 | 29 | -6.325346 | recombinase; regulator for fimA | |
| SFV_4216 | 0 | 27 | -5.715764 | hypothetical protein | |
| SFV_4217 | -1 | 25 | -4.905409 | N-acetylneuraminic acid mutarotase | |
| SFV_4218 | -1 | 24 | -3.158415 | hypothetical protein | |
| SFV_4219 | 2 | 26 | -2.893976 | IS1 ORF2 | |
| SFV_4220 | 2 | 34 | -3.527422 | IS1 encoded protein | |
| SFV_4221 | 1 | 24 | -2.331287 | DeoR family transcriptional regulator | |
| SFV_4222 | 3 | 27 | -0.647099 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4205 | PF06580 | 31 | 0.008 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4206 | SURFACELAYER | 28 | 0.047 | Lactobacillus surface layer protein signature. | |
>SURFACELAYER#Lactobacillus surface layer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4207 | VACCYTOTOXIN | 33 | 4e-04 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4209 | PF00577 | 1080 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 63 | SFV_4236 | SFV_4242 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4236 | -2 | 19 | -5.591126 | hypothetical protein | |
| SFV_4237 | 0 | 18 | -4.626698 | hypothetical protein | |
| SFV_4238 | -1 | 19 | -4.833264 | hypothetical protein | |
| SFV_4239 | 0 | 23 | -4.733929 | ornithine carbamoyltransferase subunit I | |
| SFV_4240 | 1 | 29 | -4.234038 | IS1 encoded protein | |
| SFV_4241 | 1 | 29 | -4.508313 | IS1 ORF2 | |
| SFV_4242 | 1 | 22 | -3.748090 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4237 | SACTRNSFRASE | 30 | 0.003 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 64 | SFV_4284 | SFV_4289 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4284 | 4 | 22 | -0.951497 | hypothetical protein | |
| SFV_4285 | 4 | 23 | -1.162424 | IS1 ORF2 | |
| SFV_4286 | 3 | 15 | -0.297702 | IS600 ORF2 | |
| SFV_4287 | 3 | 13 | -0.281368 | transport of lysine/cadaverine | |
| SFV_4288 | 2 | 13 | 0.556009 | IS1 encoded protein | |
| SFV_4289 | 2 | 20 | 0.101783 | IS1 ORF2 |
| 65 | SFV_4319 | SFV_4336 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4319 | -1 | 13 | 3.087140 | oligoribonuclease | |
| SFV_4325 | -1 | 13 | 3.040277 | ****hypothetical protein | |
| SFV_4324 | -1 | 13 | 3.217724 | hypothetical protein | |
| SFV_4326 | -1 | 13 | 2.606395 | ATPase | |
| SFV_4327 | 0 | 12 | 3.040313 | N-acetylmuramoyl-L-alanine amidase | |
| SFV_4328 | 1 | 14 | 2.696539 | DNA mismatch repair protein | |
| SFV_4329 | 2 | 18 | 1.832251 | tRNA delta(2)-isopentenylpyrophosphate | |
| SFV_4330 | 4 | 25 | 1.800269 | RNA-binding protein Hfq | |
| SFV_4331 | 4 | 22 | 1.707961 | GTPase HflX | |
| SFV_4332 | 4 | 23 | 2.099950 | FtsH protease regulator HflK | |
| SFV_4333 | 4 | 22 | 1.900357 | FtsH protease regulator HflC | |
| SFV_4334 | 3 | 20 | 1.858307 | hypothetical protein | |
| SFV_4335 | 3 | 20 | 1.913416 | adenylosuccinate synthetase | |
| SFV_4336 | 3 | 15 | 1.389388 | transcriptional repressor NsrR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4331 | SECA | 32 | 0.004 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4332 | cloacin | 32 | 0.006 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 66 | SFV_4354 | SFV_4367 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4354 | 3 | 28 | -0.348842 | L-ribulose-5-phosphate 4-epimerase | |
| SFV_4355 | 3 | 30 | -1.060369 | hypothetical protein | |
| SFV_4356 | 5 | 32 | -0.239651 | 30S ribosomal protein S6 | |
| SFV_4357 | 5 | 28 | -1.015566 | 30S ribosomal protein S18 | |
| SFV_4358 | 3 | 25 | -1.976155 | 50S ribosomal protein L9 | |
| SFV_4359 | 2 | 21 | -1.580202 | ISEhe3 orfA | |
| SFV_4360 | 1 | 22 | -5.727989 | ISEhe3 orfB | |
| SFV_4361 | 0 | 17 | -5.374390 | IS600 ORF2 | |
| SFV_4362 | 0 | 15 | -4.856345 | IS600 ORF1 | |
| SFV_4363 | 0 | 15 | -5.041508 | hypothetical protein | |
| SFV_4364 | -1 | 13 | -4.445649 | endoribonuclease SymE | |
| SFV_4365 | -1 | 16 | -6.047899 | hypothetical protein | |
| SFV_4366 | -1 | 13 | -3.253839 | restriction modification enzyme M subunit | |
| SFV_4367 | -1 | 15 | -3.616761 | restriction modification enzyme R subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4359 | HTHFIS | 27 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 67 | SFV_0359 | SFV_0365 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0359 | 1 | 15 | 1.189673 | fructokinase | |
| SFV_0361 | 1 | 12 | 1.443874 | MFS transport protein AraJ | |
| SFV_0362 | 0 | 13 | 1.750315 | exonuclease SbcC | |
| SFV_0363 | -1 | 12 | 1.773403 | exonuclease SbcD | |
| SFV_0364 | 0 | 13 | 1.892676 | transcriptional regulator PhoB | |
| SFV_0365 | 0 | 12 | 1.452977 | phosphate regulon sensor protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0359 | ACETATEKNASE | 29 | 0.021 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0361 | TCRTETA | 52 | 2e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0362 | RTXTOXIND | 39 | 7e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0363 | FRAGILYSIN | 31 | 0.009 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0364 | HTHFIS | 95 | 1e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0365 | PF06580 | 34 | 0.001 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 68 | SFV_0408 | SFV_0414 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0408 | 1 | 21 | 0.094328 | muropeptide transporter | |
| SFV_0409 | 2 | 27 | -0.488289 | hypothetical protein | |
| SFV_0410 | 3 | 26 | -0.253097 | trigger factor | |
| SFV_0411 | 0 | 20 | 0.042246 | ATP-dependent Clp protease proteolytic subunit | |
| SFV_0412 | 1 | 20 | -0.230152 | ATP-dependent protease ATP-binding subunit ClpX | |
| SFV_0413 | 0 | 18 | -0.298240 | DNA-binding ATP-dependent protease La | |
| SFV_0414 | 0 | 13 | -0.454460 | transcriptional regulator HU subunit beta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0408 | TCRTETA | 39 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0409 | PF06291 | 29 | 0.006 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0412 | HTHFIS | 29 | 0.043 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0413 | GPOSANCHOR | 35 | 0.001 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0414 | DNABINDINGHU | 117 | 3e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 69 | SFV_0431 | SFV_0443 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0431 | 0 | 12 | -1.042815 | hypothetical protein | |
| SFV_0432 | 1 | 15 | -0.864953 | hypothetical protein | |
| SFV_0433 | 0 | 14 | -0.390797 | maltose O-acetyltransferase | |
| SFV_0434 | 1 | 15 | -0.263067 | hypothetical protein | |
| SFV_0435 | 1 | 15 | 0.626619 | acriflavin resistance protein | |
| SFV_0436 | 1 | 12 | 0.019843 | acriflavin resistance protein A | |
| SFV_0437 | 1 | 14 | -0.141464 | DNA-binding transcriptional repressor AcrR | |
| SFV_0438 | 3 | 14 | 2.027142 | potassium efflux protein KefA | |
| SFV_0439 | 4 | 16 | 3.746374 | hypothetical protein | |
| SFV_0440 | 3 | 16 | 4.309813 | primosomal replication protein N'' | |
| SFV_0441 | 1 | 20 | 3.297398 | hypothetical protein | |
| SFV_0442 | 1 | 19 | 3.343564 | adenine phosphoribosyltransferase | |
| SFV_0443 | 0 | 14 | 2.829098 | DNA polymerase III subunits gamma and tau |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0431 | BCTERIALGSPF | 30 | 0.023 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0435 | ACRIFLAVINRP | 1368 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0436 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0437 | HTHTETR | 222 | 5e-76 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0438 | RTXTOXIND | 32 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0443 | IGASERPTASE | 39 | 7e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 70 | SFV_0539 | SFV_0544 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0539 | 0 | 18 | 4.530794 | enterobactin exporter EntS | |
| SFV_0540 | -1 | 20 | 4.638369 | iron-enterobactin ABC transporter | |
| SFV_0542 | -1 | 22 | 4.590071 | enterobactin synthase subunit E | |
| SFV_0543 | 0 | 19 | 4.471285 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | |
| SFV_0544 | 0 | 17 | 4.117701 | 2,3-dihydroxybenzoate-2,3-dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0539 | TCRTETA | 35 | 5e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0540 | FERRIBNDNGPP | 63 | 2e-13 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0543 | ISCHRISMTASE | 439 | e-159 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0544 | DHBDHDRGNASE | 358 | e-128 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 71 | SFV_0777 | SFV_0780 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0777 | -2 | 16 | 2.382365 | ABC transporter ATP-binding protein | |
| SFV_0778 | -2 | 13 | 2.309464 | hypothetical protein | |
| SFV_0779 | -1 | 13 | 2.087321 | DNA-binding transcriptional regulator | |
| SFV_0780 | -1 | 13 | 1.935474 | ATP-dependent RNA helicase RhlE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0777 | PF05272 | 32 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0778 | RTXTOXIND | 62 | 6e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0779 | HTHTETR | 73 | 7e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0780 | SECA | 31 | 0.013 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 72 | SFV_0827 | SFV_0832 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_0827 | 1 | 13 | -0.559096 | chloramphenicol resistance pump Cmr | |
| SFV_0828 | 0 | 16 | -0.950529 | hypothetical protein | |
| SFV_0829 | 1 | 16 | -1.432366 | hypothetical protein | |
| SFV_0830 | 0 | 15 | -0.521855 | DeoR-type transcriptional regulator | |
| SFV_0831 | 0 | 14 | -1.360945 | DeoR-type transcriptional regulator | |
| SFV_0832 | 0 | 12 | -0.356670 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0827 | TCRTETB | 39 | 3e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0830 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0831 | HTHTETR | 50 | 6e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_0832 | TCRTETA | 32 | 0.006 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 73 | SFV_1098 | SFV_1106 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1098 | 1 | 12 | 1.897351 | flagellar hook protein FlgE | |
| SFV_1099 | 0 | 11 | 1.850067 | flagellar basal body rod protein FlgF | |
| SFV_1100 | 0 | 12 | 2.119221 | flagellar basal body rod protein FlgG | |
| SFV_1101 | 1 | 13 | 1.840818 | flagellar basal body L-ring protein | |
| SFV_1102 | 1 | 13 | 1.470569 | flagellar basal body P-ring biosynthesis protein | |
| SFV_1103 | 2 | 15 | 1.180909 | flagellar rod assembly protein/muramidase FlgJ | |
| SFV_1105 | 2 | 14 | 0.879240 | flagellar hook-associated protein FlgL | |
| SFV_1106 | 2 | 15 | 1.388671 | ribonuclease E |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1098 | FLGHOOKAP1 | 39 | 3e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1100 | FLGHOOKAP1 | 44 | 4e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1101 | FLGLRINGFLGH | 350 | e-126 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1102 | FLGPRINGFLGI | 423 | e-150 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1103 | FLGFLGJ | 503 | 0.0 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1105 | FLAGELLIN | 45 | 2e-07 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1106 | IGASERPTASE | 68 | 2e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 74 | SFV_1207 | SFV_1220 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1207 | 0 | 19 | -0.930727 | iron ABC transporter ATP-binding protein | |
| SFV_1208 | 0 | 18 | -1.032472 | iron compound ABC transporter permease | |
| SFV_1209 | -1 | 16 | -1.213108 | ATP-binding protein of ABC transporter | |
| SFV_1210 | -2 | 16 | -1.499501 | hypothetical protein | |
| SFV_1211 | -2 | 14 | -0.891372 | trehalase | |
| SFV_1212 | -2 | 13 | -1.084271 | dihydroxyacetone kinase subunit M | |
| SFV_1213 | -2 | 14 | -1.000769 | dihydroxyacetone kinase subunit DhaL | |
| SFV_1214 | -1 | 14 | -1.147424 | dihydroxyacetone kinase subunit DhaK | |
| SFV_1215 | -1 | 13 | -0.632371 | DNA-binding transcriptional regulator DhaR | |
| SFV_1216 | 0 | 16 | -0.397484 | adhesion and penetration protein | |
| SFV_1217 | -1 | 16 | 0.807403 | GTP-dependent nucleic acid-binding protein EngD | |
| SFV_1218 | -1 | 14 | 1.072872 | peptidyl-tRNA hydrolase | |
| SFV_1219 | -2 | 11 | 1.191654 | hypothetical protein | |
| SFV_1220 | -2 | 13 | 1.177817 | sulfate transporter YchM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1207 | LCRVANTIGEN | 30 | 0.011 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1209 | FERRIBNDNGPP | 39 | 2e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1212 | PHPHTRNFRASE | 140 | 1e-38 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1213 | adhesinmafb | 28 | 0.020 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1215 | HTHFIS | 243 | 8e-76 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1216 | PRTACTNFAMLY | 210 | 1e-58 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1220 | RTXTOXINA | 33 | 0.003 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 75 | SFV_1236 | SFV_1239 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1236 | -2 | 16 | 1.537616 | hypothetical protein | |
| SFV_1237 | -1 | 19 | 1.922884 | transcriptional regulator NarL | |
| SFV_1238 | -1 | 21 | 2.201071 | nitrate/nitrite sensor protein NarX | |
| SFV_1239 | -1 | 23 | 1.711466 | nitrate transport protein nark |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1236 | INTIMIN | 254 | 2e-78 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1237 | HTHFIS | 74 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1238 | PF06580 | 53 | 1e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1239 | ACRIFLAVINRP | 33 | 0.004 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 76 | SFV_1928 | SFV_1943 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1928 | 1 | 14 | 0.990782 | chemotaxis regulatory protein CheY | |
| SFV_1929 | 0 | 12 | 1.237759 | chemotaxis-specific methylesterase | |
| SFV_1930 | 0 | 12 | 1.178229 | chemotaxis methyltransferase CheR | |
| SFV_1931 | 0 | 13 | 0.934894 | methyl-accepting protein IV | |
| SFV_1932 | -1 | 14 | 0.350362 | methyl-accepting chemotaxis protein II, | |
| SFV_1933 | -1 | 15 | -0.332100 | purine-binding chemotaxis protein | |
| SFV_1934 | -1 | 16 | -0.449312 | chemotaxis protein CheA | |
| SFV_1935 | -2 | 15 | -1.284569 | flagellar motor protein MotB | |
| SFV_1936 | -2 | 14 | -1.682364 | flagellar motor protein MotA | |
| SFV_1937 | -1 | 13 | -1.989935 | transcriptional activator FlhC | |
| SFV_1939 | -2 | 12 | -2.065438 | universal stress protein UspC | |
| SFV_1941 | -2 | 14 | -1.647816 | trehalose-6-phosphate phosphatase | |
| SFV_1942 | -1 | 16 | -1.715441 | L-arabinose transporter permease | |
| SFV_1943 | -2 | 18 | -2.931331 | L-arabinose transport ATP-binding protein araG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1928 | HTHFIS | 90 | 4e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1929 | HTHFIS | 65 | 9e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1934 | PF06580 | 42 | 4e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1935 | PF05272 | 31 | 0.009 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1936 | PF05844 | 33 | 0.001 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1943 | PF05272 | 30 | 0.012 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 77 | SFV_1967 | SFV_1993 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_1967 | 0 | 12 | -1.586117 | flagellin | |
| SFV_1968 | -2 | 16 | 0.057680 | flagellar capping protein | |
| SFV_1969 | -1 | 14 | -0.210819 | flagellar protein FliS | |
| SFV_1970 | -2 | 12 | 0.185726 | flagellar biosynthesis protein FliT | |
| SFV_1971 | -1 | 11 | -1.494525 | cytoplasmic alpha-amylase | |
| SFV_1972 | 0 | 17 | -3.606362 | hypothetical protein | |
| SFV_1973 | 2 | 21 | -4.886217 | inner membrane protein | |
| SFV_1974 | 4 | 28 | -6.597706 | hypothetical protein | |
| SFV_1976 | 1 | 21 | -4.507356 | virulence protein | |
| SFV_1977 | 1 | 20 | -3.856241 | porin | |
| SFV_1978 | -1 | 17 | -0.009281 | regulator | |
| SFV_1979 | 0 | 17 | 2.981430 | multidrug efflux protein | |
| SFV_1980 | 0 | 18 | 3.945148 | flagellar hook-basal body protein FliE | |
| SFV_1982 | -1 | 17 | 3.386552 | flagellar motor switch protein G | |
| SFV_1983 | -2 | 16 | 3.281796 | flagellar assembly protein H | |
| SFV_1984 | -1 | 16 | 3.043309 | flagellum-specific ATP synthase | |
| SFV_1986 | -1 | 15 | 1.920597 | flagellar hook-length control protein | |
| SFV_1987 | -2 | 19 | 1.524592 | flagellar basal body protein FliL | |
| SFV_1988 | 0 | 16 | 0.229913 | flagellar motor switch protein FliM | |
| SFV_1989 | 1 | 17 | -2.626901 | flagellar motor switch protein FliN | |
| SFV_1990 | 1 | 18 | -3.434033 | flagellar biosynthesis protein FliO | |
| SFV_1991 | 0 | 20 | -4.329844 | flagellar biosynthesis protein FliP | |
| SFV_1992 | -1 | 17 | -3.625312 | flagellar biosynthesis protein FliQ | |
| SFV_1993 | -1 | 16 | -2.871941 | flagellar biosynthesis protein FliR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1967 | FLAGELLIN | 234 | 9e-73 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1968 | TYPE3OMBPROT | 32 | 0.005 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1973 | RTXTOXIND | 30 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1974 | PF01206 | 93 | 6e-29 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1977 | ECOLIPORIN | 508 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1978 | HTHFIS | 28 | 0.032 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1980 | FLGHOOKFLIE | 117 | 8e-38 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1982 | FLGMOTORFLIG | 310 | e-107 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1983 | FLGFLIH | 373 | e-135 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1986 | FLGHOOKFLIK | 468 | e-168 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1988 | FLGMOTORFLIM | 382 | e-135 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1989 | FLGMOTORFLIN | 210 | 6e-74 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1991 | FLGBIOSNFLIP | 333 | e-119 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1992 | TYPE3IMQPROT | 67 | 1e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_1993 | TYPE3IMRPROT | 203 | 4e-67 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| 78 | SFV_2002 | SFV_2009 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2002 | 1 | 15 | -0.804047 | DNA cytosine methylase | |
| SFV_2003 | 2 | 20 | -0.927063 | hypothetical protein | |
| SFV_2004 | 4 | 24 | -2.090550 | ISEhe3 orfB | |
| SFV_2005 | 4 | 27 | -2.528506 | ISEhe3 orfA | |
| SFV_2006 | 4 | 24 | -1.969288 | outer membrane pore protein | |
| SFV_2007 | 0 | 22 | -1.037276 | insertion element IS2 transposase InsD | |
| SFV_2008 | 0 | 29 | -6.560394 | insertion sequence 2 OrfA protein | |
| SFV_2009 | 0 | 32 | -7.705471 | outer membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2002 | PF05272 | 29 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2003 | CARBMTKINASE | 34 | 9e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2005 | HTHFIS | 27 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2006 | ECOLIPORIN | 294 | e-100 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2009 | ECOLIPORIN | 75 | 5e-20 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 79 | SFV_2130 | SFV_2143 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2130 | -3 | 13 | 3.869165 | chaperone | |
| SFV_2131 | -2 | 16 | 4.263998 | 3-methyl-adenine DNA glycosylase | |
| SFV_2133 | -2 | 17 | 4.221739 | ISSfl2 ORF | |
| SFV_2134 | -1 | 18 | 3.822803 | multidrug efflux system subunit MdtA | |
| SFV_2135 | -1 | 19 | 3.941273 | hypothetical protein | |
| SFV_2136 | -1 | 19 | 3.495642 | hypothetical protein | |
| SFV_2137 | -1 | 18 | 3.248280 | multidrug efflux system subunit MdtC | |
| SFV_2138 | -2 | 11 | 1.138895 | multidrug ABC transporter | |
| SFV_2139 | -1 | 9 | -0.100962 | signal transduction histidine-protein kinase | |
| SFV_2140 | 1 | 11 | -1.817726 | DNA-binding transcriptional regulator BaeR | |
| SFV_2141 | 3 | 13 | -2.042244 | hypothetical protein | |
| SFV_2142 | 3 | 14 | -2.263727 | hypothetical protein | |
| SFV_2143 | 5 | 21 | -3.949648 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2130 | SHAPEPROTEIN | 50 | 8e-09 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2134 | RTXTOXIND | 44 | 5e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2135 | ACRIFLAVINRP | 722 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2136 | ACRIFLAVINRP | 186 | 2e-57 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2137 | ACRIFLAVINRP | 906 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2138 | TCRTETB | 113 | 2e-29 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2139 | BCTERIALGSPF | 31 | 0.009 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2140 | HTHFIS | 76 | 6e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2143 | LIPOLPP20 | 27 | 0.026 | LPP20 lipoprotein precursor signature. | |
>LIPOLPP20#LPP20 lipoprotein precursor signature. | |||||
| 80 | SFV_2179 | SFV_2186 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2179 | -1 | 13 | -1.901546 | hypothetical protein | |
| SFV_2180 | -1 | 14 | -1.203122 | hypothetical protein | |
| SFV_2181 | 0 | 16 | -2.278179 | two-component response-regulatory protein YehT | |
| SFV_2182 | 3 | 22 | -2.720774 | 2-component sensor protein | |
| SFV_2183 | 7 | 25 | -2.815498 | IS4 orf | |
| SFV_2184 | 6 | 27 | -2.732368 | DNA damage-inducible protein | |
| SFV_2185 | 6 | 28 | -2.601302 | hypothetical protein | |
| SFV_2186 | 4 | 27 | -2.779338 | prophage protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2179 | INTIMIN | 28 | 0.015 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2181 | HTHFIS | 71 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2182 | PF06580 | 221 | 1e-69 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2186 | LUXSPROTEIN | 31 | 0.002 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| 81 | SFV_2323 | SFV_2331 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2323 | 0 | 16 | -0.713216 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate | |
| SFV_2324 | 1 | 15 | -1.011716 | undecaprenyl phosphate | |
| SFV_2325 | 0 | 13 | 0.268159 | bifunctional UDP-glucuronic acid | |
| SFV_2326 | 1 | 15 | 1.787040 | hypothetical protein | |
| SFV_2327 | 0 | 12 | 2.163341 | 4-amino-4-deoxy-L-arabinose transferase | |
| SFV_2328 | 0 | 14 | 3.645351 | sucrose-6 phosphate hydrolase | |
| SFV_2329 | 0 | 14 | 4.059623 | hypothetical protein | |
| SFV_2331 | 0 | 14 | 4.018807 | O-succinylbenzoic acid--CoA ligase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2323 | TYPE3IMSPROT | 29 | 0.037 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2325 | NUCEPIMERASE | 114 | 4e-30 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2328 | BCTERIALGSPC | 29 | 0.003 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2331 | ALARACEMASE | 29 | 0.038 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 82 | SFV_2426 | SFV_2429 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2426 | 1 | 36 | -10.039858 | multidrug resistance protein Y | |
| SFV_2427 | 1 | 36 | -9.175637 | multidrug resistance protein K | |
| SFV_2428 | 1 | 34 | -8.435580 | DNA-binding transcriptional activator EvgA | |
| SFV_2429 | 1 | 34 | -8.047413 | hybrid sensory histidine kinase in two-component |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2426 | TCRTETB | 119 | 3e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2427 | RTXTOXIND | 77 | 1e-17 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2428 | HTHFIS | 50 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2429 | HTHFIS | 80 | 2e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 83 | SFV_2817 | SFV_2823 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_2817 | 0 | 12 | 1.885578 | S-ribosylhomocysteinase | |
| SFV_2818 | -1 | 13 | 1.842269 | multidrug resistant protein emrB | |
| SFV_2820 | -1 | 14 | 2.133887 | transcriptional repressor MprA | |
| SFV_2821 | 1 | 15 | 0.853421 | hypothetical protein | |
| SFV_2822 | -1 | 13 | 0.063915 | hypothetical protein | |
| SFV_2823 | -1 | 12 | -0.002865 | major facilitator superfamily permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2817 | LUXSPROTEIN | 290 | e-104 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2818 | TCRTETB | 133 | 3e-36 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2820 | PF05272 | 28 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_2823 | TCRTETB | 46 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 84 | SFV_3175 | SFV_3182 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3175 | 0 | 13 | 0.447965 | fimbrial protein | |
| SFV_3176 | 1 | 12 | 2.233308 | hypothetical protein | |
| SFV_3177 | 1 | 12 | 2.329383 | glycosylase | |
| SFV_3178 | 0 | 15 | 1.811327 | hypothetical protein | |
| SFV_3179 | 1 | 17 | 1.762860 | chromosome replication initiator DnaA | |
| SFV_3180 | 1 | 18 | 2.474023 | hypothetical protein | |
| SFV_3181 | 0 | 19 | 2.683655 | hypothetical protein | |
| SFV_3182 | 0 | 19 | 1.334567 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3175 | FIMBRIALPAPF | 29 | 0.022 | Escherichia coli: P pili tip fibrillum papF protein... | |
>FIMBRIALPAPF#Escherichia coli: P pili tip fibrillum papF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3177 | BINARYTOXINB | 30 | 0.043 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3179 | RTXTOXINA | 28 | 0.037 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3182 | NUCEPIMERASE | 29 | 0.014 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 85 | SFV_3261 | SFV_3268 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3261 | -1 | 17 | -1.243425 | serine endoprotease | |
| SFV_3262 | -2 | 13 | -0.781290 | serine endoprotease | |
| SFV_3263 | -2 | 13 | -0.614123 | malate dehydrogenase | |
| SFV_3264 | -2 | 12 | -0.952088 | arginine repressor ArgR | |
| SFV_3265 | -3 | 13 | -0.356379 | hypothetical protein | |
| SFV_3266 | -2 | 13 | 0.660998 | hypothetical protein | |
| SFV_3267 | -3 | 11 | 1.220829 | p-hydroxybenzoic acid efflux subunit AaeB | |
| SFV_3268 | -2 | 10 | 1.177603 | p-hydroxybenzoic acid efflux subunit AaeA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3261 | V8PROTEASE | 72 | 5e-16 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3262 | V8PROTEASE | 53 | 8e-10 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3263 | DHBDHDRGNASE | 28 | 0.045 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3264 | ARGREPRESSOR | 169 | 4e-57 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3268 | RTXTOXIND | 53 | 4e-10 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 86 | SFV_3341 | SFV_3345 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3341 | 4 | 45 | -2.012700 | leader peptidase | |
| SFV_3342 | 6 | 52 | -1.551912 | bacterioferritin | |
| SFV_3343 | 6 | 54 | -0.691784 | bacterioferritin-associated ferredoxin | |
| SFV_3344 | 6 | 53 | -0.583058 | elongation factor Tu | |
| SFV_3345 | 4 | 44 | -0.765867 | elongation factor G |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3341 | PREPILNPTASE | 142 | 8e-45 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3342 | HELNAPAPROT | 38 | 3e-06 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3344 | TCRTETOQM | 80 | 3e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3345 | TCRTETOQM | 611 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 87 | SFV_3351 | SFV_3361 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3351 | 0 | 13 | -0.389588 | hypothetical protein | |
| SFV_3352 | 0 | 14 | 1.036430 | FKBP-type peptidylprolyl isomerase | |
| SFV_3353 | -1 | 14 | 2.726372 | hypothetical protein | |
| SFV_3354 | -2 | 14 | 2.592697 | FKBP-type peptidylprolyl isomerase | |
| SFV_3355 | -1 | 15 | 2.383931 | hypothetical protein | |
| SFV_3356 | -1 | 14 | 2.367347 | glutathione-regulated potassium-efflux system | |
| SFV_3357 | -1 | 17 | 2.098957 | glutathione-regulated potassium-efflux system | |
| SFV_3358 | -1 | 17 | 1.355552 | ABC transporter ATP-binding protein | |
| SFV_3359 | -2 | 11 | 0.321054 | hydrolase | |
| SFV_3360 | -1 | 11 | 0.513644 | hypothetical protein | |
| SFV_3361 | -1 | 12 | 0.716183 | phosphoribulokinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3351 | ACRIFLAVINRP | 29 | 0.021 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3352 | INFPOTNTIATR | 133 | 2e-40 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3356 | 60KDINNERMP | 30 | 0.021 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3357 | ISCHRISMTASE | 32 | 0.001 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3358 | GPOSANCHOR | 33 | 0.005 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3361 | PF07299 | 32 | 0.002 | Fibronectin-binding protein (FBP) | |
>PF07299#Fibronectin-binding protein (FBP) | |||||
| 88 | SFV_3449 | SFV_3456 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3449 | -1 | 19 | 2.241460 | acetyltransferase YhhY | |
| SFV_3450 | -1 | 21 | 2.508113 | gamma-glutamyltranspeptidase | |
| SFV_3451 | -1 | 24 | 2.734897 | hypothetical protein | |
| SFV_3452 | 0 | 24 | 2.903737 | cytoplasmic glycerophosphodiester | |
| SFV_3454 | 0 | 26 | 3.035141 | glycerol-3-phosphate transporter membrane | |
| SFV_3455 | -2 | 25 | 3.407635 | glycerol-3-phosphate transporter permease | |
| SFV_3456 | -1 | 23 | 3.201517 | glycerol-3-phosphate transporter periplasmic |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3449 | SACTRNSFRASE | 37 | 2e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3450 | NAFLGMOTY | 32 | 0.007 | Sodium-type flagellar protein MotY precursor signature. | |
>NAFLGMOTY#Sodium-type flagellar protein MotY precursor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3452 | PF04619 | 28 | 0.017 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3456 | MALTOSEBP | 39 | 2e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 89 | SFV_3483 | SFV_3488 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3483 | 0 | 19 | 3.815173 | nickel transporter ATP-binding protein NikE | |
| SFV_3484 | -1 | 14 | -0.269039 | nickel responsive regulator | |
| SFV_3485 | 1 | 19 | -4.334806 | hypothetical protein | |
| SFV_3486 | 1 | 18 | -4.136670 | transporter | |
| SFV_3487 | 1 | 23 | -6.141802 | ABC transporter ATP-binding protein | |
| SFV_3488 | 1 | 38 | -11.707199 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3483 | HTHFIS | 29 | 0.019 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3486 | ABC2TRNSPORT | 50 | 5e-09 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3487 | PF05272 | 30 | 0.045 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3488 | RTXTOXIND | 84 | 4e-20 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 90 | SFV_3535 | SFV_3540 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3535 | 1 | 13 | 1.201306 | outer membrane lipoprotein | |
| SFV_3536 | -1 | 10 | -0.064734 | biotin sulfoxide reductase | |
| SFV_3537 | -2 | 11 | -1.075111 | hypothetical protein | |
| SFV_3539 | -2 | 12 | -0.369058 | 3-methyl-adenine DNA glycosylase I | |
| SFV_3538 | -2 | 14 | 0.324402 | lipase | |
| SFV_3540 | -2 | 17 | 1.013243 | resistance protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3535 | OMPADOMAIN | 112 | 9e-32 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3537 | SACTRNSFRASE | 35 | 5e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3538 | ECOLNEIPORIN | 28 | 0.039 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3540 | TCRTETA | 41 | 8e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 91 | SFV_3630 | SFV_3635 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3630 | 2 | 22 | 1.619915 | GTP-binding factor | |
| SFV_3631 | 0 | 16 | 1.662262 | glutamine synthetase | |
| SFV_3632 | 0 | 14 | 1.143962 | nitrogen regulation protein NR(II) | |
| SFV_3633 | 0 | 14 | 0.039151 | nitrogen regulation protein NR(I) | |
| SFV_3634 | 0 | 13 | -0.821196 | coproporphyrinogen III oxidase | |
| SFV_3635 | 0 | 14 | -1.526220 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3630 | TCRTETOQM | 147 | 8e-40 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3632 | PF06580 | 28 | 0.042 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3633 | HTHFIS | 597 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3635 | SECA | 30 | 0.005 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 92 | SFV_3837 | SFV_3847 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_3837 | 1 | 17 | 4.074032 | multidrug resistance protein D | |
| SFV_3838 | 0 | 16 | 3.311743 | acetolactate synthase catalytic subunit | |
| SFV_3839 | -1 | 15 | 2.945386 | acetolactate synthase 1 regulatory subunit | |
| SFV_3840 | -1 | 14 | 1.783536 | DNA-binding transcriptional activator UhpA | |
| SFV_3841 | -1 | 15 | 1.303100 | sensory histidine kinase UhpB | |
| SFV_3842 | 1 | 15 | 0.533873 | regulatory protein UhpC | |
| SFV_3843 | 0 | 14 | -0.276376 | sugar phosphate antiporter | |
| SFV_3844 | -1 | 15 | -0.500508 | cryptic adenine deaminase | |
| SFV_3845 | -1 | 12 | -0.972681 | hypothetical protein | |
| SFV_3846 | 1 | 14 | -1.032457 | hypothetical protein | |
| SFV_3847 | 2 | 15 | -0.283314 | ribonucleoside transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3837 | TCRTETB | 60 | 7e-12 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3840 | HTHFIS | 61 | 2e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3841 | PF06580 | 40 | 2e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3842 | TCRTETB | 41 | 1e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3843 | TCRTETB | 34 | 0.001 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3844 | UREASE | 40 | 3e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_3847 | TCRTETA | 38 | 5e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 93 | SFV_4072 | SFV_4090 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4072 | 0 | 15 | 3.187000 | transcriptional regulator HU subunit alpha | |
| SFV_4073 | 0 | 16 | 3.670333 | hypothetical protein | |
| SFV_4074 | 0 | 16 | 3.639202 | zinc resistance protein | |
| SFV_4075 | 0 | 17 | 3.263708 | sensor protein ZraS | |
| SFV_4076 | 0 | 19 | 3.319435 | transcriptional regulatory protein ZraR | |
| SFV_4077 | -1 | 17 | 2.932759 | phosphoribosylamine--glycine ligase | |
| SFV_4078 | -1 | 18 | 2.797477 | bifunctional | |
| SFV_4083 | -1 | 16 | 2.763138 | *hypothetical protein | |
| SFV_4084 | -1 | 16 | 2.776397 | homoserine O-succinyltransferase | |
| SFV_4086 | -2 | 17 | 2.974694 | isocitrate lyase | |
| SFV_4089 | -1 | 17 | 2.950271 | transcriptional repressor IclR | |
| SFV_4090 | -1 | 17 | 2.846513 | B12-dependent methionine synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4072 | DNABINDINGHU | 120 | 2e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4075 | PF06580 | 37 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4076 | HTHFIS | 525 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4083 | SACTRNSFRASE | 31 | 0.001 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4086 | BINARYTOXINB | 32 | 0.004 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4090 | BCTERIALGSPD | 34 | 0.004 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| 94 | SFV_4117 | SFV_4124 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4117 | -3 | 14 | -0.012357 | DNA-binding transcriptional regulator BasR | |
| SFV_4118 | -2 | 14 | -0.192659 | sensor protein BasS/PmrB | |
| SFV_4119 | -1 | 14 | 0.156251 | proline/glycine betaine transporter | |
| SFV_4120 | 1 | 17 | 1.194407 | hypothetical protein | |
| SFV_4121 | 1 | 17 | 0.818858 | hypothetical protein | |
| SFV_4122 | 1 | 27 | 1.733454 | hypothetical protein | |
| SFV_4123 | 0 | 28 | 2.335561 | hypothetical protein | |
| SFV_4124 | 0 | 25 | 3.330451 | phosphonate/organophosphate ester transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4117 | HTHFIS | 91 | 2e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4118 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4119 | TCRTETA | 43 | 2e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4124 | PF05272 | 29 | 0.019 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 95 | SFV_4179 | SFV_4186 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4179 | -2 | 18 | 1.215048 | maltose ABC transporter ATP-binding protein | |
| SFV_4180 | -2 | 16 | 1.412697 | maltose ABC transporter substrate-binding | |
| SFV_4181 | -2 | 17 | 2.007381 | maltose transporter membrane protein | |
| SFV_4182 | -1 | 16 | 1.600711 | maltose ABC transporter permease | |
| SFV_4184 | -1 | 15 | 1.598093 | phosphate-starvation-inducible protein PsiE | |
| SFV_4185 | 0 | 13 | 1.576243 | hypothetical protein | |
| SFV_4186 | 1 | 15 | 1.538075 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4179 | PF05272 | 35 | 6e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4180 | MALTOSEBP | 755 | 0.0 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4181 | FLGHOOKAP1 | 31 | 0.011 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4186 | CHANLCOLICIN | 29 | 0.014 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 96 | SFV_4205 | SFV_4209 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4205 | 2 | 18 | -2.580225 | fructuronate transporter | |
| SFV_4206 | 2 | 23 | -3.078805 | FimH protein | |
| SFV_4207 | 1 | 23 | -2.998964 | minor fimbrial subunit | |
| SFV_4208 | 1 | 25 | -3.496060 | minor fimbrial subunit | |
| SFV_4209 | 0 | 27 | -4.241392 | Outer membrane usher protein fimD |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4205 | PF06580 | 31 | 0.008 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4206 | SURFACELAYER | 28 | 0.047 | Lactobacillus surface layer protein signature. | |
>SURFACELAYER#Lactobacillus surface layer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4207 | VACCYTOTOXIN | 33 | 4e-04 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4209 | PF00577 | 1080 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 97 | SFV_4429 | SFV_4435 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SFV_4429 | -1 | 17 | 0.641213 | phosphoglycerate mutase | |
| SFV_4430 | -1 | 14 | 0.038119 | right origin-binding protein | |
| SFV_4431 | hypothetical protein | ||||
| SFV_4432 | DNA-binding response regulator CreB | ||||
| SFV_4433 | sensory histidine kinase CreC | ||||
| SFV_4434 | hypothetical protein | ||||
| SFV_4435 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4429 | VACCYTOTOXIN | 29 | 0.014 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4432 | HTHFIS | 87 | 6e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4433 | PF06580 | 33 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SFV_4435 | HTHFIS | 82 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||