| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | PA5570 | PA5555 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5570 | 0 | 15 | -3.746385 | 50S ribosomal protein L34 | |
| PA5569 | -1 | 14 | -3.581464 | ribonuclease P | |
| PA5568 | -1 | 12 | -3.393931 | inner membrane protein translocase subunit YidC | |
| PA5567 | -1 | 15 | -2.572335 | tRNA modification GTPase TrmE | |
| PA5566 | -2 | 16 | -3.187894 | hypothetical protein | |
| PA5565 | -1 | 14 | -3.736112 | tRNA uridine 5-carboxymethylaminomethyl | |
| PA5564 | -1 | 17 | -4.157764 | 16S rRNA methyltransferase GidB | |
| PA5563 | 0 | 21 | -4.854734 | chromosome partitioning protein Soj | |
| PA5562 | 2 | 28 | -5.710240 | chromosome partitioning protein | |
| PA5561 | 0 | 26 | -6.446658 | ATP synthase subunit I | |
| PA5560 | 1 | 23 | -6.521586 | ATP synthase subunit A | |
| PA5559 | 2 | 26 | -6.113878 | ATP synthase subunit C | |
| PA5558 | 2 | 24 | -5.491877 | ATP synthase subunit B | |
| PA5557 | 1 | 18 | -4.187250 | ATP synthase subunit delta | |
| PA5556 | 2 | 16 | -3.644820 | ATP synthase subunit alpha | |
| PA5555 | 1 | 13 | -3.180513 | ATP synthase subunit gamma |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5568 | 60KDINNERMP | 677 | 0.0 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| 2 | PA5473 | PA5466 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5473 | 3 | 8 | 0.310999 | hypothetical protein | |
| PA5472 | 2 | 9 | 0.533248 | hypothetical protein | |
| PA5471 | 3 | 9 | 1.011096 | hypothetical protein | |
| PA5470 | 3 | 9 | 1.051901 | peptide chain release factor-like protein | |
| PA5469 | 2 | 10 | 1.265385 | hypothetical protein | |
| PA5468 | 1 | 10 | 2.026014 | citrate transporter | |
| PA5467 | 2 | 12 | 2.499185 | hypothetical protein | |
| PA5466 | 2 | 11 | 2.202946 | hypothetical protein |
| 3 | PA5409 | PA5384 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5409 | 4 | 19 | -0.389051 | hypothetical protein | |
| PA5408 | 5 | 25 | -1.399748 | hypothetical protein | |
| PA5407 | 6 | 24 | -2.989001 | hypothetical protein | |
| PA5406 | 5 | 21 | -1.519521 | hypothetical protein | |
| PA5405 | 0 | 17 | 1.234633 | hypothetical protein | |
| PA5404 | -1 | 13 | 1.665920 | hypothetical protein | |
| PA5403 | -2 | 12 | 1.126982 | transcriptional regulator | |
| PA5402 | -2 | 12 | 1.109652 | hypothetical protein | |
| PA5401 | 0 | 14 | 0.903756 | hypothetical protein | |
| PA5400 | 0 | 14 | 0.506024 | electron transfer flavoprotein subunit alpha | |
| PA5399 | 0 | 12 | -0.167974 | dimethylglycine catabolism protein DgcB | |
| PA5398 | 2 | 12 | -0.357940 | dimethylglycine catabolism protein DgcA | |
| PA5397 | 2 | 11 | -0.355133 | hypothetical protein | |
| PA5396 | 2 | 10 | 0.497412 | hypothetical protein | |
| PA5395 | 2 | 10 | 2.033521 | hypothetical protein | |
| PA5394 | 0 | 10 | 2.171097 | cardiolipin synthetase | |
| PA5393 | -1 | 9 | 2.138788 | hypothetical protein | |
| PA5392 | -1 | 10 | 2.046376 | hypothetical protein | |
| PA5391 | -1 | 10 | 2.849660 | hypothetical protein | |
| PA5390 | -1 | 11 | 2.399152 | acetylornithine deacetylase | |
| PA5389 | 2 | 12 | 2.694626 | CdhR family transcriptional regulator | |
| PA5388 | 2 | 10 | 2.810586 | hypothetical protein | |
| PA5387 | 3 | 11 | 3.368060 | carnitine dehydrogenase | |
| PA5386 | 3 | 12 | 3.567879 | 3-hydroxybutyryl-CoA dehydrogenase | |
| PA5385 | 4 | 13 | 2.681730 | carnitine dehydrogenase | |
| PA5384 | 2 | 11 | 2.450658 | lipolytic protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5399 | TCRTETA | 32 | 0.008 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 4 | PA5269 | PA5253 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5269 | 0 | 17 | -3.738322 | hypothetical protein | |
| PA5268 | -1 | 13 | -3.137433 | magnesium/cobalt transporter | |
| PA5267 | 0 | 15 | -2.884533 | secreted protein Hcp | |
| PA5266 | 0 | 17 | -2.848234 | hypothetical protein | |
| PA5265 | 0 | 20 | -3.452229 | hypothetical protein | |
| PA5264 | -1 | 14 | -2.119159 | hypothetical protein | |
| PA5263 | 0 | 10 | 0.188909 | argininosuccinate lyase | |
| PA5262 | 3 | 15 | 0.257774 | alginate biosynthesis protein AlgZ/FimS | |
| PA5261 | 2 | 14 | 0.679267 | alginate biosynthesis regulatory protein AlgR | |
| PA5260 | 4 | 14 | 0.442984 | porphobilinogen deaminase | |
| PA5259 | 4 | 18 | -0.256492 | uroporphyrinogen-III synthase | |
| PA5258 | 10 | 23 | -0.548596 | hypothetical protein | |
| PA5257 | 11 | 26 | -0.764483 | hypothetical protein | |
| PA5256 | 9 | 25 | -1.164409 | disulfide bond formation protein | |
| PA5255 | 8 | 25 | -1.426318 | anti-RNA polymerase sigma 70 factor | |
| PA5254 | 7 | 22 | -1.452500 | FkbP-type peptidyl-prolyl cis-trans isomerase | |
| PA5253 | 6 | 20 | -1.118981 | alginate regulatory protein AlgP |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5262 | PF06580 | 182 | 1e-56 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5261 | HTHFIS | 79 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5254 | INFPOTNTIATR | 96 | 2e-26 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5253 | IGASERPTASE | 62 | 1e-12 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 5 | PA5102 | PA5087 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5102 | 2 | 9 | 1.191779 | hypothetical protein | |
| PA5101 | 0 | 11 | 0.955273 | hypothetical protein | |
| PA5100 | 2 | 11 | 0.640727 | urocanate hydratase | |
| PA5099 | 3 | 11 | 0.222337 | transporter | |
| PA5098 | 2 | 11 | 0.929737 | histidine ammonia-lyase | |
| PA5097 | 2 | 10 | 1.011440 | amino acid permease | |
| PA5096 | -1 | 9 | 1.318908 | ABC transporter | |
| PA5095 | -1 | 6 | 1.142792 | ABC transporter permease | |
| PA5094 | -3 | 8 | 0.635094 | ABC transporter ATP-binding protein | |
| PA5093 | -1 | 13 | -0.876341 | histidine/phenylalanine ammonia-lyase | |
| PA5092 | 2 | 21 | -3.188153 | imidazolonepropionase | |
| PA5091 | 2 | 23 | -3.370420 | N-formylglutamate amidohydrolase | |
| PA5090 | 3 | 23 | -2.670777 | hypothetical protein | |
| PA5089 | 5 | 27 | -3.619250 | hypothetical protein | |
| PA5088 | 6 | 29 | -4.461367 | hypothetical protein | |
| PA5087 | 4 | 15 | -1.383716 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5092 | UREASE | 36 | 2e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5088 | 56KDTSANTIGN | 30 | 0.019 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| 6 | PA5065 | PA5060 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5065 | 6 | 15 | -0.856728 | ubiquinone biosynthetic protein UbiB | |
| PA5064 | 7 | 16 | -1.313404 | hypothetical protein | |
| PA5063 | 4 | 14 | -1.809555 | ubiquinone/menaquinone biosynthesis | |
| PA5062 | 3 | 14 | -1.346383 | hypothetical protein | |
| PA5061 | 3 | 11 | -1.814575 | hypothetical protein | |
| PA5060 | 3 | 11 | -1.172929 | polyhydroxyalkanoate synthesis protein PhaF |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5060 | IGASERPTASE | 47 | 6e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 7 | PA5002 | PA4988 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5002 | -1 | 15 | -3.548164 | hypothetical protein | |
| PA5001 | -2 | 12 | -3.343673 | hypothetical protein | |
| PA5000 | -2 | 10 | -2.139847 | alpha-1,3-rhamnosyltransferase WapR | |
| PA4999 | -2 | 9 | -1.292373 | O-antigen ligase WaaL | |
| PA4998 | -3 | 9 | -0.201645 | hypothetical protein | |
| PA4997 | -3 | 10 | 0.166956 | transporter MsbA | |
| PA4996 | -2 | 9 | 1.779070 | bifunctional heptose 7-phosphate kinase/heptose | |
| PA4995 | -1 | 9 | 1.618278 | acyl-CoA dehydrogenase | |
| PA4994 | -1 | 8 | 1.853138 | acyl-CoA dehydrogenase | |
| PA4993 | 0 | 9 | 3.358575 | hypothetical protein | |
| PA4992 | -1 | 9 | 2.952493 | hypothetical protein | |
| PA4991 | 0 | 8 | 3.305821 | hypothetical protein | |
| PA4990 | 1 | 9 | 3.276280 | SMR multidrug efflux transporter | |
| PA4989 | 0 | 10 | 3.371464 | transcriptional regulator | |
| PA4988 | 0 | 9 | 3.066554 | 3-deoxy-D-manno-octulosonic acid transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5002 | FLGMRINGFLIF | 29 | 0.039 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4997 | ACRIFLAVINRP | 31 | 0.013 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4996 | LPSBIOSNTHSS | 28 | 0.043 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 8 | PA4912 | PA4867 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4912 | 2 | 14 | -0.123905 | branched-chain amino acid ABC transporter | |
| PA4911 | 1 | 12 | 0.837510 | branched-chain amino acid ABC transporter | |
| PA4910 | 0 | 10 | 1.509787 | ABC transporter ATP-binding protein | |
| PA4909 | 0 | 10 | 2.139503 | ABC transporter ATP-binding protein | |
| PA4908 | 0 | 10 | 3.247530 | ornithine cyclodeaminase | |
| PA4907 | -1 | 9 | 2.693930 | short-chain dehydrogenase | |
| PA4906 | 0 | 9 | 3.179041 | transcriptional regulator | |
| PA4905 | -1 | 9 | 3.360371 | vanillate O-demethylase | |
| PA4904 | -1 | 10 | 3.219039 | vanillate O-demethylase oxygenase | |
| PA4903 | -1 | 10 | 2.745397 | major facilitator superfamily transporter | |
| PA4902 | 0 | 8 | 1.496501 | transcriptional regulator | |
| PA4901 | 0 | 7 | 1.421688 | benzoylformate decarboxylase | |
| PA4900 | -1 | 7 | 1.686682 | major facilitator superfamily transporter | |
| PA4899 | -1 | 8 | 1.797954 | aldehyde dehydrogenase | |
| PA4898 | 0 | 8 | 1.432972 | vanillate porin OpdK | |
| PA4897 | -1 | 8 | 2.249653 | hypothetical protein | |
| PA4896 | 1 | 12 | 4.480418 | RNA polymerase sigma factor | |
| PA4895 | 1 | 12 | 4.863252 | transmembrane sensor | |
| PA4894 | 2 | 12 | 4.810144 | hypothetical protein | |
| PA4893 | 1 | 10 | 3.372919 | urease accessory protein UreG | |
| PA4892 | 2 | 11 | 2.958628 | urease accessory protein UreF | |
| PA4891 | 2 | 11 | 3.093630 | urease accessory protein UreE | |
| PA4890 | 1 | 10 | 2.474318 | transcriptional regulator | |
| PA4889 | 2 | 10 | 2.493202 | oxidoreductase | |
| PA4888 | 2 | 10 | 1.528039 | acyl-CoA desaturase | |
| PA4887 | 1 | 9 | 1.342297 | major facilitator superfamily transporter | |
| PA4886 | 1 | 9 | 1.519575 | two-component sensor | |
| PA4885 | 0 | 11 | -0.433026 | two-component response regulator | |
| PA4884 | 1 | 10 | -0.044826 | hypothetical protein | |
| PA4883 | -1 | 8 | -0.683478 | hypothetical protein | |
| PA4882 | 1 | 9 | -0.732162 | hypothetical protein | |
| PA4881 | 1 | 11 | -0.976590 | hypothetical protein | |
| PA4880 | 2 | 11 | -1.164824 | bacterioferritin | |
| PA4879 | 2 | 11 | -0.338597 | hypothetical protein | |
| PA4878 | -1 | 11 | -0.489001 | transcriptional regulator | |
| PA4877 | -1 | 13 | 0.966937 | hypothetical protein | |
| PA4876 | -1 | 11 | 0.703368 | OsmE family transcriptional regulator | |
| PA4874 | -1 | 9 | 0.393288 | hypothetical protein | |
| PA4873 | 1 | 10 | 0.826123 | heat-shock protein | |
| PA4872 | 2 | 9 | 0.878933 | hypothetical protein | |
| PA4871 | 1 | 12 | 1.218738 | hypothetical protein | |
| PA4870 | 3 | 13 | 0.415032 | hypothetical protein | |
| PA4869 | 2 | 15 | 1.699138 | hypothetical protein | |
| PA4868 | 3 | 19 | 2.638271 | urease subunit alpha | |
| PA4867 | 0 | 17 | 3.193355 | urease subunit beta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4907 | DHBDHDRGNASE | 79 | 1e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4903 | TCRTETA | 50 | 9e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4900 | TCRTETB | 46 | 1e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4890 | HTHTETR | 64 | 6e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4887 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4885 | HTHFIS | 76 | 4e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4880 | HELNAPAPROT | 39 | 2e-06 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4873 | SHAPEPROTEIN | 49 | 1e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4868 | UREASE | 1096 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 9 | PA4826 | PA4818 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4826 | 2 | 8 | 1.597930 | hypothetical protein | |
| PA4825 | 2 | 7 | 1.555556 | Mg(2+) transport ATPase | |
| PA4824 | 3 | 7 | 3.077759 | hypothetical protein | |
| PA4823 | 5 | 7 | 3.135271 | hypothetical protein | |
| PA4822 | 4 | 8 | 3.050681 | hypothetical protein | |
| PA4821 | 2 | 8 | 3.873644 | transporter | |
| PA4820 | 0 | 8 | 3.465801 | hypothetical protein | |
| PA4819 | 0 | 8 | 3.728501 | glycosyl transferase family protein | |
| PA4818 | -1 | 7 | 3.590465 | hypothetical protein |
| 10 | PA4699 | PA4693 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4699 | 1 | 14 | -3.365799 | hypothetical protein | |
| PA4698 | 2 | 14 | -4.606527 | hypothetical protein | |
| PA4697 | 3 | 14 | -4.875443 | hypothetical protein | |
| PA4696 | 2 | 15 | -5.072114 | acetolactate synthase 3 catalytic subunit | |
| PA4695 | 0 | 16 | -5.214087 | acetolactate synthase small subunit | |
| PA4694 | 1 | 16 | -4.961311 | ketol-acid reductoisomerase | |
| PA4693 | -1 | 12 | -3.633034 | phosphatidylserine synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4697 | IGASERPTASE | 37 | 3e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 11 | PA4657 | PA4648 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4657 | 2 | 10 | 1.151419 | hypothetical protein | |
| PA4656 | 2 | 9 | 1.207968 | hypothetical protein | |
| PA4655 | 3 | 11 | 1.113836 | ferrochelatase | |
| PA4654 | 4 | 12 | 1.111364 | major facilitator superfamily transporter | |
| PA4653 | 7 | 15 | 0.801096 | hypothetical protein | |
| PA4652 | 4 | 12 | 0.581486 | hypothetical protein | |
| PA4651 | 5 | 10 | -0.258480 | pili assembly chaperone | |
| PA4650 | 5 | 12 | -1.438600 | hypothetical protein | |
| PA4649 | 4 | 10 | -1.132884 | hypothetical protein | |
| PA4648 | 3 | 8 | -1.341132 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4656 | NUCEPIMERASE | 39 | 2e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4654 | TCRTETA | 44 | 1e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4652 | PF00577 | 403 | e-130 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| 12 | PA4559 | PA4554 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4559 | 1 | 11 | -4.095239 | lipoprotein signal peptidase | |
| PA4558 | 1 | 11 | -3.985954 | FkbP-type peptidyl-prolyl cis-trans isomerase | |
| PA4557 | 2 | 12 | -4.130585 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |
| PA4556 | 1 | 12 | -4.276515 | type 4 fimbrial biogenesis protein PilE | |
| PA4555 | 0 | 13 | -4.354654 | type 4 fimbrial biogenesis protein PilY2 | |
| PA4554 | 0 | 13 | -4.227030 | type 4 fimbrial biogenesis protein PilY1 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4558 | INFPOTNTIATR | 34 | 1e-04 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4557 | PF06704 | 28 | 0.033 | DspF/AvrF protein | |
>PF06704#DspF/AvrF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4556 | BCTERIALGSPG | 42 | 1e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 13 | PA4533 | PA4519 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4533 | 2 | 14 | -1.077814 | hypothetical protein | |
| PA4532 | 0 | 10 | -3.311488 | hypothetical protein | |
| PA4531 | -1 | 17 | -5.381514 | hypothetical protein | |
| PA4530 | -1 | 15 | -4.564972 | zinc-binding protein | |
| PA4529 | -1 | 13 | -3.663605 | dephospho-CoA kinase | |
| PA4528 | -1 | 14 | -4.058296 | type 4 prepilin peptidase PilD | |
| PA4526 | -1 | 15 | -3.537049 | type 4 fimbrial biogenesis protein PilB | |
| PA4525 | -3 | 14 | -2.079031 | type 4 fimbrial protein PilA | |
| PA4524 | -1 | 8 | -1.736565 | *nicotinate-nucleotide pyrophosphorylase | |
| PA4523 | -1 | 10 | -1.932896 | hypothetical protein | |
| PA4522 | -2 | 9 | -2.512758 | N-acetyl-anhydromuranmyl-L-alanine amidase | |
| PA4521 | -2 | 8 | -1.861384 | hypothetical protein | |
| PA4520 | -2 | 7 | -2.311918 | chemotaxis transducer | |
| PA4519 | 1 | 10 | -3.425243 | ornithine decarboxylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4529 | DHBDHDRGNASE | 30 | 0.005 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4528 | PREPILNPTASE | 353 | e-125 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4525 | BCTERIALGSPG | 50 | 1e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4524 | RTXTOXIND | 29 | 0.020 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 14 | PA4471 | PA4448 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4471 | 2 | 13 | -1.058167 | hypothetical protein | |
| PA4470 | 1 | 12 | -1.554248 | fumarate hydratase | |
| PA4469 | -1 | 14 | -1.824561 | hypothetical protein | |
| PA4468 | -2 | 15 | -2.718946 | superoxide dismutase | |
| PA4467 | 0 | 17 | -3.603188 | hypothetical protein | |
| PA4466 | 1 | 19 | -5.043265 | phosphoryl carrier protein | |
| PA4465 | -1 | 18 | -5.074901 | hypothetical protein | |
| PA4464 | 0 | 19 | -5.690467 | nitrogen regulatory IIA protein | |
| PA4463 | 1 | 20 | -5.261184 | hypothetical protein | |
| PA4462 | 0 | 17 | -4.103210 | RNA polymerase factor sigma-54 | |
| PA4461 | 3 | 15 | -3.399054 | ABC transporter ATP-binding protein | |
| PA4460 | 2 | 13 | -3.254959 | hypothetical protein | |
| PA4459 | 2 | 12 | -3.218886 | hypothetical protein | |
| PA4458 | 1 | 13 | -2.888437 | hypothetical protein | |
| PA4457 | 0 | 11 | -2.901937 | arabinose-5-phosphate isomerase KdsD | |
| PA4456 | 0 | 13 | -3.599706 | ABC transporter ATP-binding protein | |
| PA4455 | -1 | 14 | -3.300246 | ABC transporter permease | |
| PA4454 | -1 | 15 | -3.035881 | hypothetical protein | |
| PA4453 | 2 | 14 | -1.823239 | hypothetical protein | |
| PA4452 | 4 | 13 | -1.462086 | hypothetical protein | |
| PA4451 | 4 | 12 | -1.191866 | hypothetical protein | |
| PA4450 | 4 | 13 | -0.923784 | UDP-N-acetylglucosamine | |
| PA4449 | 3 | 11 | -0.935430 | ATP phosphoribosyltransferase | |
| PA4448 | 2 | 11 | -1.594847 | histidinol dehydrogenase |
| 15 | PA4437 | PA4424 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4437 | 0 | 11 | -3.035726 | hypothetical protein | |
| PA4436 | -1 | 11 | -3.089001 | transcriptional regulator | |
| PA4435 | 0 | 12 | -4.271212 | acyl-CoA dehydrogenase | |
| PA4434 | 1 | 15 | -4.759624 | oxidoreductase | |
| PA4433 | 2 | 19 | -5.949413 | 50S ribosomal protein L13 | |
| PA4432 | 2 | 20 | -5.628722 | 30S ribosomal protein S9 | |
| PA4431 | 2 | 15 | -5.186188 | iron-sulfur protein | |
| PA4430 | 1 | 14 | -5.376936 | cytochrome b | |
| PA4429 | 1 | 17 | -4.566382 | cytochrome C1 | |
| PA4428 | 0 | 15 | -2.082808 | stringent starvation protein A | |
| PA4427 | 1 | 11 | -1.289347 | ClpXP protease specificity-enhancing factor | |
| PA4426 | 1 | 12 | -1.495210 | hypothetical protein | |
| PA4425 | 2 | 13 | -1.482247 | phosphoheptose isomerase | |
| PA4424 | 2 | 15 | -1.439572 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4434 | HELNAPAPROT | 29 | 0.016 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| 16 | PA4168 | PA4161 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4168 | 2 | 10 | 1.728601 | second ferric pyoverdine receptor FpvB | |
| PA4167 | 2 | 12 | 3.077901 | 2,5-diketo-D-gluconate reductase B | |
| PA4166 | 0 | 11 | 4.096075 | acetyltransferase | |
| PA4165 | 0 | 10 | 5.193538 | transcriptional regulator | |
| PA4164 | 0 | 9 | 4.882827 | hypothetical protein | |
| PA4163 | 1 | 8 | 4.894122 | amidase | |
| PA4162 | 2 | 10 | 4.905111 | short-chain dehydrogenase | |
| PA4161 | -2 | 11 | 3.295108 | ferric enterobactin transporter FepG |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4166 | SACTRNSFRASE | 39 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4162 | DHBDHDRGNASE | 119 | 6e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 17 | PA3892 | PA3884 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3892 | 2 | 13 | 0.004826 | hypothetical protein | |
| PA3891 | 2 | 13 | 0.090188 | ABC transporter ATP-binding protein | |
| PA3890 | 1 | 10 | 0.860356 | ABC transporter permease | |
| PA3889 | 1 | 9 | 1.199831 | ABC transporter | |
| PA3888 | 2 | 9 | 1.707751 | ABC transporter permease | |
| PA3887 | 1 | 8 | 2.560347 | Na+/H+ antiporter NhaP | |
| PA3886a | 1 | 13 | 3.488723 | hypothetical protein | |
| PA3886 | 0 | 14 | 3.621274 | hypothetical protein | |
| PA3885 | 1 | 13 | 3.555749 | protein tyrosine phosphatase TpbA | |
| PA3884 | 0 | 13 | 3.007703 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3892 | RTXTOXIND | 50 | 6e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 18 | PA3871 | PA3866 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3871 | 0 | 36 | -6.497232 | PpiC-type peptidyl-prolyl cis-trans isomerase | |
| PA3870 | 0 | 42 | -8.402670 | molybdenum cofactor biosynthesis protein A | |
| PA3869 | 1 | 43 | -9.296200 | hypothetical protein | |
| PA3868 | 0 | 38 | -8.200990 | hypothetical protein | |
| PA3867 | 0 | 30 | -6.214534 | DNA invertase | |
| PA3866 | 0 | 25 | -4.750031 | pyocin protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3866 | PYOCINKILLER | 199 | 4e-57 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 19 | PA3821 | PA3808 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3821 | 2 | 11 | -2.032861 | preprotein translocase subunit SecD | |
| PA3820 | 2 | 13 | -2.129103 | preprotein translocase subunit SecF | |
| PA3819 | 1 | 14 | -2.003170 | hypothetical protein | |
| PA3818 | 1 | 14 | -2.484070 | type III secretion system regulator SuhB | |
| PA3817 | 1 | 16 | -3.134504 | methyltransferase | |
| PA3816 | 1 | 18 | -3.017923 | O-acetylserine synthase | |
| PA3815 | 1 | 14 | -1.947335 | HTH-type transcriptional regulator | |
| PA3814 | 1 | 14 | -2.038388 | cysteine desulfurase | |
| PA3813 | 2 | 14 | -1.975376 | scaffold protein | |
| PA3812 | 3 | 17 | -2.093134 | iron-binding protein IscA | |
| PA3811 | 2 | 17 | -2.602931 | co-chaperone HscB | |
| PA3810 | 1 | 16 | -3.004326 | chaperone protein HscA | |
| PA3809 | 1 | 17 | -3.375336 | (2Fe-2S) ferredoxin | |
| PA3808 | 2 | 16 | -3.003920 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3821 | SECFTRNLCASE | 81 | 1e-18 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3820 | SECFTRNLCASE | 303 | e-105 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3811 | CHANLCOLICIN | 27 | 0.045 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3810 | SHAPEPROTEIN | 107 | 2e-27 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 20 | PA3795 | PA3778 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3795 | 2 | 9 | -1.610406 | oxidoreductase | |
| PA3794 | 0 | 8 | -0.730766 | hypothetical protein | |
| PA3793 | -1 | 9 | -0.306019 | hypothetical protein | |
| PA3792 | -1 | 9 | -0.135594 | 2-isopropylmalate synthase | |
| PA3791 | -2 | 8 | 1.094112 | hypothetical protein | |
| PA3790 | -1 | 9 | 1.177665 | copper transport outer membrane porin OprC | |
| PA3789 | 3 | 9 | 1.851891 | hypothetical protein | |
| PA3788 | 2 | 13 | 1.471783 | hypothetical protein | |
| PA3787 | 3 | 11 | 1.783139 | hypothetical protein | |
| PA3786 | 2 | 13 | 1.229930 | hypothetical protein | |
| PA3785 | 2 | 11 | 1.052949 | hypothetical protein | |
| PA3784 | 2 | 11 | 1.219885 | hypothetical protein | |
| PA3783 | 1 | 11 | 1.347236 | hypothetical protein | |
| PA3782 | 1 | 10 | 2.073838 | transcriptional regulator | |
| PA3781 | 0 | 11 | 1.960519 | transporter | |
| PA3780 | 1 | 10 | 2.577377 | hypothetical protein | |
| PA3779 | 1 | 9 | 2.692523 | hypothetical protein | |
| PA3778 | 1 | 8 | 3.346789 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3783 | ISCHRISMTASE | 34 | 3e-04 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3781 | RTXTOXINA | 33 | 0.004 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 21 | PA3671 | PA3643 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3671 | 2 | 8 | 0.875803 | ABC transporter permease | |
| PA3670 | 2 | 8 | 1.619876 | hypothetical protein | |
| PA3669 | 4 | 11 | 1.936816 | hypothetical protein | |
| PA3668 | 3 | 14 | 1.666387 | hypothetical protein | |
| PA3667 | 1 | 12 | 1.246300 | cysteine desulfurase | |
| PA3666 | 1 | 13 | 0.074846 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | |
| PA3665 | 2 | 10 | 0.208798 | hypothetical protein | |
| PA3664 | -2 | 9 | 0.160500 | hypothetical protein | |
| PA3663 | 0 | 9 | -0.804033 | hypothetical protein | |
| PA3662 | 0 | 10 | -1.362487 | hypothetical protein | |
| PA3661 | 0 | 10 | -1.787875 | hypothetical protein | |
| PA3660 | -1 | 10 | -2.214638 | sodium/hydrogen antiporter | |
| PA3659 | 0 | 12 | -2.887185 | succinyldiaminopimelate transaminase | |
| PA3658 | 0 | 13 | -3.897382 | bifunctional | |
| PA3657 | 2 | 15 | -4.152746 | methionine aminopeptidase | |
| PA3656 | 1 | 14 | -2.967233 | 30S ribosomal protein S2 | |
| PA3655 | 1 | 10 | -1.503406 | elongation factor Ts | |
| PA3654 | 0 | 12 | -0.969415 | uridylate kinase | |
| PA3653 | -1 | 9 | -1.875532 | ribosome recycling factor | |
| PA3652 | -1 | 8 | -2.113627 | ditrans,polycis-undecaprenyl-diphosphate | |
| PA3651 | -1 | 8 | -2.250574 | phosphatidate cytidylyltransferase | |
| PA3650 | 0 | 9 | -3.108460 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | |
| PA3649 | 1 | 10 | -3.856005 | zinc metalloprotease | |
| PA3648 | 0 | 10 | -3.432971 | outer membrane protein Opr86 | |
| PA3647 | 2 | 13 | -2.564057 | hypothetical protein | |
| PA3646 | 3 | 11 | -2.033403 | UDP-3-O-acylglucosamine N-acyltransferase | |
| PA3645 | 1 | 10 | -2.274037 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | |
| PA3644 | 2 | 10 | -2.046856 | acyl-[acyl-carrier-protein]--UDP-N- | |
| PA3643 | 2 | 11 | -0.957699 | lipid-A-disaccharide synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3666 | FERRIBNDNGPP | 29 | 0.030 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3658 | YERSSTKINASE | 32 | 0.014 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3654 | CARBMTKINASE | 37 | 3e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 22 | PA3569 | PA3547 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3569 | -1 | 10 | 3.113178 | 3-hydroxyisobutyrate dehydrogenase | |
| PA3568 | -1 | 10 | 2.951524 | propionyl-CoA synthetase | |
| PA3567 | 0 | 10 | 4.076602 | oxidoreductase | |
| PA3566 | 0 | 10 | 4.496817 | hypothetical protein | |
| PA3565 | -1 | 11 | 4.754169 | transcriptional regulator | |
| PA3564 | -1 | 10 | 3.956987 | hypothetical protein | |
| PA3563 | 0 | 10 | 3.906078 | FruR family transcriptional regulator | |
| PA3562 | 0 | 10 | 4.089966 | PTS system fructose-specific transporter subunit | |
| PA3561 | 2 | 11 | 3.151552 | 1-phosphofructokinase | |
| PA3560 | 2 | 11 | 3.385166 | PTS system fructose-specific transporter subunit | |
| PA3559 | 2 | 13 | 2.458336 | nucleotide sugar dehydrogenase | |
| PA3558 | 3 | 14 | 3.077332 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol | |
| PA3557 | 1 | 14 | 2.832975 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol | |
| PA3556 | 0 | 15 | 2.139346 | 4-amino-4-deoxy-L-arabinose lipid A transferase | |
| PA3555 | -1 | 17 | 1.960950 | 4-deoxy-4-formamido-L-arabinose- | |
| PA3554 | -1 | 16 | 1.394998 | bifunctional UDP-glucuronic acid | |
| PA3553 | 0 | 18 | 0.610214 | undecaprenyl-phosphate | |
| PA3552 | 0 | 18 | 0.343274 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate | |
| PA3551 | 2 | 18 | -0.108825 | bifunctional mannose-1-phosphate | |
| PA3550 | 2 | 17 | -0.144676 | alginate o-acetyltransferase AlgF | |
| PA3549 | 1 | 17 | -0.142650 | alginate o-acetylase AlgJ | |
| PA3548 | 2 | 19 | 0.229839 | alginate o-acetylase AlgI | |
| PA3547 | 2 | 19 | 0.737918 | alginate lyase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3562 | PHPHTRNFRASE | 609 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3554 | NUCEPIMERASE | 109 | 4e-28 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 23 | PA3421 | PA3399 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3421 | -2 | 12 | 3.398605 | hypothetical protein | |
| PA3420 | 0 | 11 | 4.288069 | transcriptional regulator | |
| PA3419 | -1 | 11 | 4.176601 | hypothetical protein | |
| PA3418 | -2 | 11 | 3.675210 | leucine dehydrogenase | |
| PA3417 | -2 | 12 | 3.340295 | pyruvate dehydrogenase E1 component subunit | |
| PA3416 | -2 | 11 | 3.070026 | pyruvate dehydrogenase E1 component subunit | |
| PA3415 | -2 | 12 | 2.406622 | branched-chain alpha-keto acid dehydrogenase | |
| PA3414 | 0 | 14 | 3.062335 | hypothetical protein | |
| PA3413 | 0 | 11 | 1.517078 | hypothetical protein | |
| PA3412 | 1 | 11 | 1.894654 | hypothetical protein | |
| PA3411 | 1 | 11 | 2.942587 | hypothetical protein | |
| PA3410 | 1 | 10 | 3.129254 | ECF subfamily sigma-70 factor | |
| PA3409 | 2 | 11 | 3.455367 | transmembrane sensor | |
| PA3408 | 2 | 10 | 2.818319 | heme uptake outer membrane receptor HasR | |
| PA3407 | 2 | 13 | 3.352576 | heme acquisition protein HasA | |
| PA3406 | 2 | 12 | 3.310902 | transporter HasD | |
| PA3405 | 1 | 12 | 1.936538 | metalloprotease secretion protein | |
| PA3404 | 2 | 13 | 0.620261 | hypothetical protein | |
| PA3403a | 1 | 13 | -0.397989 | hypothetical protein | |
| PA3403 | 1 | 14 | 0.186406 | hypothetical protein | |
| PA3402 | 1 | 15 | -0.094635 | hypothetical protein | |
| PA3401 | 2 | 15 | 0.063146 | hypothetical protein | |
| PA3400 | 2 | 16 | 0.897137 | hypothetical protein | |
| PA3399 | 2 | 14 | 2.608548 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3418 | DHBDHDRGNASE | 28 | 0.032 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3407 | PF06438 | 276 | 1e-97 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3405 | RTXTOXIND | 417 | e-145 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3404 | RTXTOXIND | 32 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3402 | RTXTOXIND | 56 | 6e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3400 | ABC2TRNSPORT | 28 | 0.039 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 24 | PA3296 | PA3278 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3296 | 1 | 19 | -3.360048 | alkaline phosphatase | |
| PA3295 | 4 | 31 | -5.554693 | HIT family protein | |
| PA3294 | 5 | 31 | -5.258671 | hypothetical protein | |
| PA3293 | 7 | 42 | -6.993487 | hypothetical protein | |
| PA3292 | 7 | 43 | -7.403121 | hypothetical protein | |
| PA3291 | 3 | 26 | -5.040047 | hypothetical protein | |
| PA3290 | 2 | 18 | -3.011618 | hypothetical protein | |
| PA3289 | -2 | 10 | 0.155404 | hypothetical protein | |
| PA3288 | -2 | 12 | -0.281479 | hypothetical protein | |
| PA3287 | -1 | 14 | -0.317685 | hypothetical protein | |
| PA3286 | 0 | 12 | -0.873524 | 3-oxoacyl-ACP synthase | |
| PA3285 | 1 | 13 | -1.867532 | ECF subfamily sigma-70 factor | |
| PA3284 | 3 | 13 | -2.436042 | hypothetical protein | |
| PA3283 | 2 | 12 | -2.344108 | hypothetical protein | |
| PA3282 | 1 | 12 | -2.536649 | hypothetical protein | |
| PA3281 | 2 | 11 | -2.754577 | hypothetical protein | |
| PA3280 | 2 | 12 | -2.708265 | pyrophosphate-specific outer membrane porin | |
| PA3279 | 0 | 10 | -2.157106 | phosphate-specific outer membrane porin OprP | |
| PA3278 | 2 | 15 | -0.961815 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3288 | ISCHRISMTASE | 28 | 0.013 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 25 | PA3211 | PA3201 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3211 | 2 | 10 | 1.416828 | ABC transporter permease | |
| PA3210 | 2 | 11 | 1.361655 | potassium uptake protein TrkH | |
| PA3209 | 2 | 13 | 2.973531 | hypothetical protein | |
| PA3208 | 3 | 13 | 2.929802 | hypothetical protein | |
| PA3207 | 3 | 15 | 2.399888 | hypothetical protein | |
| PA3206 | 2 | 16 | 0.589747 | two-component sensor | |
| PA3205 | 1 | 13 | 0.155566 | hypothetical protein | |
| PA3204 | 0 | 13 | 0.178246 | two-component response regulator | |
| PA3203 | 1 | 14 | -0.744538 | hypothetical protein | |
| PA3202 | 3 | 11 | -0.128251 | hypothetical protein | |
| PA3201 | 3 | 11 | -0.648491 | intracellular septation protein A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3206 | PF06580 | 29 | 0.026 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3204 | HTHFIS | 103 | 9e-28 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3203 | IGASERPTASE | 28 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3202 | adhesinmafb | 30 | 9e-04 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 26 | PA3173 | PA3142 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3173 | 2 | 11 | -0.174148 | short-chain dehydrogenase | |
| PA3172 | 2 | 10 | -0.475929 | phosphoglycolate phosphatase | |
| PA3171 | 2 | 10 | -1.071622 | ubiquinone biosynthesis O-methyltransferase | |
| PA3170 | 1 | 9 | -0.984401 | N-ethylammeline chlorohydrolase | |
| PA3169 | 1 | 12 | -1.331590 | methylthioribose-1-phosphate isomerase | |
| PA3168 | 1 | 13 | -2.942771 | DNA gyrase subunit A | |
| PA3167 | 3 | 15 | -3.716435 | 3-phosphoserine/phosphohydroxythreonine | |
| PA3166 | 3 | 27 | -6.546531 | bifunctional chorismate mutase/prephenate | |
| PA3165 | 2 | 35 | -8.360960 | histidinol-phosphate aminotransferase | |
| PA3163 | 3 | 40 | -10.750571 | cytidylate kinase | |
| PA3162 | 1 | 48 | -12.674931 | 30S ribosomal protein S1 | |
| PA3161 | 2 | 59 | -13.987351 | integration host factor subunit beta | |
| PA3160 | 2 | 62 | -14.610081 | O-antigen chain length regulator | |
| PA3159 | 4 | 65 | -15.478475 | UDP-N-acetyl-d-glucosamine 6-dehydrogenase | |
| PA3158 | 5 | 72 | -16.559923 | UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate | |
| PA3157 | 6 | 77 | -17.066223 | acetyltransferase | |
| PA3156 | 4 | 79 | -18.124452 | UDP-2-acetamido-3-amino-2, | |
| PA3155 | 4 | 83 | -19.455081 | UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate | |
| PA3154 | 3 | 87 | -20.524635 | B-band O-antigen polymerase | |
| PA3153 | 1 | 82 | -19.384645 | O-antigen translocase | |
| PA3152 | 1 | 77 | -18.134076 | imidazole glycerol phosphate synthase subunit | |
| PA3151 | 1 | 75 | -16.884536 | imidazole glycerol phosphate synthase subunit | |
| PA3150 | 3 | 75 | -16.114958 | LPS biosynthesis protein WbpG | |
| PA3149 | 3 | 72 | -13.815604 | glycosyltransferase WbpH | |
| PA3148 | 3 | 65 | -11.801660 | UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate | |
| PA3147 | 2 | 49 | -8.723325 | glycosyl transferase WbpJ | |
| PA3146 | 2 | 46 | -7.501433 | NAD-dependent epimerase/dehydratase | |
| PA3145 | 0 | 31 | -5.735572 | glycosyltransferase WbpL | |
| PA3143 | 0 | 18 | -3.636019 | hypothetical protein | |
| PA3142 | 0 | 11 | -3.375712 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3173 | DHBDHDRGNASE | 89 | 2e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3170 | UREASE | 37 | 2e-04 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3161 | DNABINDINGHU | 118 | 1e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3147 | ANTHRAXTOXNA | 34 | 0.002 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3146 | NUCEPIMERASE | 79 | 1e-18 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3145 | RTXTOXIND | 29 | 0.031 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 27 | PA3085 | PA3074 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3085 | 2 | 11 | -1.077669 | hypothetical protein | |
| PA3084 | 0 | 12 | -1.569609 | hypothetical protein | |
| PA3083 | 0 | 12 | -1.306313 | aminopeptidase | |
| PA3082 | 1 | 12 | -1.149518 | glycine betaine transmethylase | |
| PA3081 | 0 | 11 | -0.185050 | hypothetical protein | |
| PA3080 | 1 | 10 | 0.589430 | hypothetical protein | |
| PA3079 | 1 | 11 | 1.097761 | hypothetical protein | |
| PA3078 | 2 | 13 | 2.954193 | two-component sensor | |
| PA3077 | 3 | 13 | 3.713310 | two-component response regulator | |
| PA3076 | 3 | 11 | 3.767853 | hypothetical protein | |
| PA3075 | 2 | 11 | 3.287898 | hypothetical protein | |
| PA3074 | 2 | 11 | 2.810831 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3079 | ACRIFLAVINRP | 71 | 1e-14 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3078 | PF07675 | 32 | 0.005 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3077 | HTHFIS | 84 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3074 | TYPE4SSCAGX | 37 | 2e-04 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| 28 | PA3023 | PA2976 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3023 | 2 | 8 | -0.082497 | lipid kinase | |
| PA3022 | 1 | 8 | -0.602435 | hypothetical protein | |
| PA3021 | 2 | 9 | -0.713178 | hypothetical protein | |
| PA3020 | 2 | 8 | -1.002563 | lytic transglycosylase | |
| PA3019 | 1 | 8 | -2.256443 | ABC transporter ATP-binding protein | |
| PA3018 | 0 | 9 | -2.821107 | hypothetical protein | |
| PA3017 | 0 | 11 | -2.956076 | hypothetical protein | |
| PA3016 | 1 | 10 | -3.121276 | hypothetical protein | |
| PA3015 | 1 | 10 | -3.510979 | hypothetical protein | |
| PA3014 | 2 | 11 | -3.690588 | fatty acid oxidation complex subunit alpha | |
| PA3013 | 0 | 12 | -3.138621 | 3-ketoacyl-CoA thiolase | |
| PA3012 | 2 | 11 | -3.094460 | hypothetical protein | |
| PA3011 | 2 | 9 | -2.755126 | DNA topoisomerase I | |
| PA3010 | 4 | 16 | -1.445401 | hypothetical protein | |
| PA3009 | 4 | 16 | -0.753972 | hypothetical protein | |
| PA3008 | 3 | 15 | -0.273174 | cell division inhibitor SulA | |
| PA3007 | 1 | 8 | -0.096350 | LexA repressor | |
| PA3006 | -1 | 8 | -0.539621 | transcriptional regulator PsrA | |
| PA3005 | -1 | 8 | -1.023264 | beta-hexosaminidase | |
| PA3004 | -1 | 8 | -1.338258 | S-methyl-5'-thioinosine phosphorylase | |
| PA3003 | -1 | 8 | -1.592684 | hypothetical protein | |
| PA3002 | -1 | 8 | -1.647786 | transcription-repair coupling factor | |
| PA3001 | 2 | 10 | -2.868904 | glyceraldehyde-3-phosphate dehydrogenase | |
| PA3000 | 2 | 10 | -2.877061 | aromatic amino acid transporter AroP | |
| PA2999 | 1 | 9 | -2.525278 | Na(+)-translocating NADH-quinone reductase | |
| PA2998 | 0 | 12 | -2.331820 | Na(+)-translocating NADH-quinone reductase | |
| PA2997 | 0 | 14 | -2.510535 | Na(+)-translocating NADH-quinone reductase | |
| PA2996 | 1 | 13 | -3.240939 | Na(+)-translocating NADH-quinone reductase | |
| PA2995 | 1 | 12 | -2.428325 | Na(+)-translocating NADH-quinone reductase | |
| PA2994 | 1 | 10 | -2.085462 | Na(+)-translocating NADH-quinone reductase | |
| PA2993 | 1 | 11 | -2.096349 | hypothetical protein | |
| PA2992 | 0 | 10 | -2.148497 | hypothetical protein | |
| PA2991 | 1 | 11 | -2.117885 | soluble pyridine nucleotide transhydrogenase | |
| PA2990 | 2 | 12 | -1.647227 | phosphodiesterase | |
| PA2989 | 2 | 15 | 0.117335 | hypothetical protein | |
| PA2988 | 3 | 14 | 0.053740 | hypothetical protein | |
| PA2987 | 3 | 16 | 0.507049 | lipoprotein-releasing system ABC transporter | |
| PA2986 | 3 | 17 | 0.667727 | hypothetical protein | |
| PA2985 | 3 | 18 | 1.342938 | hypothetical protein | |
| PA2984 | 2 | 17 | 1.700224 | hypothetical protein | |
| PA2983 | 2 | 13 | -0.345817 | translocation protein TolQ | |
| PA2982 | 0 | 17 | -0.102004 | hypothetical protein | |
| PA2981 | 4 | 17 | 0.343197 | tetraacyldisaccharide 4'-kinase | |
| PA2980 | 3 | 17 | -0.123538 | hypothetical protein | |
| PA2979 | 4 | 17 | -0.121458 | 3-deoxy-manno-octulosonate cytidylyltransferase | |
| PA2978 | 3 | 16 | -0.735915 | phosphotyrosine protein phosphatase | |
| PA2977 | 3 | 14 | -0.651076 | UDP-N-acetylenolpyruvoylglucosamine reductase | |
| PA2976 | 4 | 15 | -1.095850 | ribonuclease E |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3019 | RTXTOXIND | 33 | 0.003 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3017 | SHAPEPROTEIN | 27 | 0.019 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3006 | HTHTETR | 69 | 2e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2981 | ENTSNTHTASED | 29 | 0.022 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2976 | IGASERPTASE | 56 | 9e-10 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 29 | PA2956 | PA2945 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2956 | 2 | 14 | -2.015859 | hypothetical protein | |
| PA2955 | 3 | 16 | -2.127774 | hypothetical protein | |
| PA2954 | 3 | 15 | -1.910254 | hypothetical protein | |
| PA2953 | 2 | 16 | -1.595835 | electron transfer flavoprotein-ubiquinone | |
| PA2952 | 2 | 15 | -0.528945 | electron transfer flavoprotein subunit beta | |
| PA2951 | 1 | 15 | 0.942739 | electron transfer flavoprotein subunit alpha | |
| PA2950 | 0 | 10 | 1.120462 | reductase | |
| PA2949 | -2 | 6 | 2.832654 | lipase | |
| PA2948 | -2 | 6 | 3.228849 | precorrin-4 C(11)-methyltransferase | |
| PA2947 | -2 | 5 | 3.526766 | hypothetical protein | |
| PA2946 | -1 | 6 | 3.578673 | hypothetical protein | |
| PA2945 | -1 | 5 | 3.124770 | cobalamin biosynthesis protein CobW |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2952 | ALARACEMASE | 28 | 0.045 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 30 | PA2917 | PA2906 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2917 | 2 | 11 | 3.667815 | transcriptional regulator | |
| PA2916 | 1 | 13 | 2.888109 | hypothetical protein | |
| PA2915 | 0 | 13 | 2.524181 | hypothetical protein | |
| PA2914 | 0 | 13 | 3.248567 | ABC transporter permease | |
| PA2913 | -2 | 13 | 3.144189 | hypothetical protein | |
| PA2912 | -1 | 13 | 3.858164 | ABC transporter ATP-binding protein | |
| PA2911 | -1 | 10 | 4.190327 | TonB-dependent receptor | |
| PA2910 | 1 | 9 | 5.438474 | manganese efflux pump MntP | |
| PA2909 | 0 | 9 | 5.390370 | cobalt-precorrin-6x reductase | |
| PA2908 | 1 | 9 | 5.420751 | cobalt-precorrin-5B C(1)-methyltransferase | |
| PA2907 | -2 | 9 | 4.829826 | precorrin-6y-dependent methyltransferase CobL | |
| PA2906 | -2 | 12 | 4.013616 | oxidoreductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2917 | PF05272 | 28 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2915 | PF05932 | 27 | 0.049 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2913 | FERRIBNDNGPP | 38 | 3e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 31 | PA2886 | PA2873 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2886 | 2 | 11 | 1.469588 | hypothetical protein | |
| PA2885 | 3 | 12 | 0.443743 | atu genes repressor | |
| PA2884 | 1 | 11 | 1.136457 | hypothetical protein | |
| PA2883 | 1 | 11 | 1.277783 | hypothetical protein | |
| PA2882 | 0 | 10 | 1.542783 | two-component sensor | |
| PA2881 | 0 | 10 | 1.794705 | two-component response regulator | |
| PA2880 | -1 | 8 | 1.703981 | hypothetical protein | |
| PA2879 | 0 | 10 | 2.832327 | transcriptional regulator | |
| PA2878 | 1 | 12 | 2.569553 | hypothetical protein | |
| PA2877 | 2 | 14 | 3.147071 | transcriptional regulator | |
| PA2876 | 2 | 14 | 3.187589 | orotidine 5'-phosphate decarboxylase | |
| PA2875 | 2 | 12 | 2.941115 | hypothetical protein | |
| PA2874 | 2 | 12 | 2.739739 | hypothetical protein | |
| PA2873 | 2 | 12 | 2.159674 | protein-glutamine gamma-glutamyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2885 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2882 | PF06580 | 45 | 2e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2881 | HTHFIS | 98 | 5e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2875 | HTHFIS | 32 | 0.003 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 32 | PA2776 | PA2756 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2776 | 2 | 20 | -2.370248 | hypothetical protein | |
| PA2775 | 1 | 26 | -1.983912 | *hypothetical protein | |
| PA2774 | 0 | 21 | -1.206156 | hypothetical protein | |
| PA2773 | 0 | 17 | -1.214296 | hypothetical protein | |
| PA2772a | -1 | 16 | -0.305515 | hypothetical protein | |
| PA2772 | -2 | 17 | -0.120270 | hypothetical protein | |
| PA2771 | -1 | 14 | 0.616621 | hypothetical protein | |
| PA2770 | 0 | 13 | 0.941302 | isomerase | |
| PA2769 | 2 | 13 | 0.624584 | hypothetical protein | |
| PA2768 | 2 | 15 | 0.217990 | hypothetical protein | |
| PA2767 | 1 | 14 | -0.009588 | enoyl-CoA hydratase | |
| PA2766 | -2 | 14 | -0.625894 | transcriptional regulator | |
| PA2765 | -1 | 17 | -1.831040 | hypothetical protein | |
| PA2764 | 1 | 14 | -3.678794 | hypothetical protein | |
| PA2763a | 3 | 15 | -3.756975 | hypothetical protein | |
| PA2763 | 0 | 12 | -3.066470 | hypothetical protein | |
| PA2762 | 0 | 11 | -2.902888 | hypothetical protein | |
| PA2761 | 0 | 13 | -2.739465 | hypothetical protein | |
| PA2760 | 0 | 12 | -2.733846 | hypothetical protein | |
| PA2759 | 1 | 17 | -1.782105 | hypothetical protein | |
| PA2758 | 2 | 17 | -2.101300 | transcriptional regulator | |
| PA2757 | 2 | 17 | -2.290803 | hypothetical protein | |
| PA2756 | 2 | 18 | -1.665472 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2766 | HTHTETR | 45 | 3e-08 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2765 | PF06057 | 28 | 0.045 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2762 | MICOLLPTASE | 28 | 0.012 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2758 | TCRTETOQM | 29 | 0.028 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 33 | PA2746a | PA2725 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2746a | -1 | 13 | -3.287416 | hypothetical protein | |
| PA2746 | 0 | 15 | -3.926650 | hypothetical protein | |
| PA2745 | 0 | 15 | -4.278732 | hydrolase | |
| PA2744 | 0 | 13 | -3.898623 | threonine--tRNA ligase | |
| PA2743 | 1 | 17 | -4.153378 | translation initiation factor IF-3 | |
| PA2742 | 1 | 15 | -3.266779 | 50S ribosomal protein L35 | |
| PA2741 | 1 | 17 | -3.530747 | 50S ribosomal protein L20 | |
| PA2740 | 1 | 16 | -4.952103 | phenylalanine--tRNA ligase subunit alpha | |
| PA2739 | 1 | 21 | -5.879494 | phenylalanine--tRNA ligase subunit beta | |
| PA2738 | 2 | 29 | -8.520437 | integration host factor subunit alpha | |
| PA2737 | 0 | 25 | -8.280743 | hypothetical protein | |
| PA2736 | 0 | 30 | -9.123943 | *hypothetical protein | |
| PA2735 | 0 | 26 | -7.294389 | restriction-modification system protein | |
| PA2734 | 0 | 25 | -6.190756 | hypothetical protein | |
| PA2733 | 0 | 17 | -4.047437 | hypothetical protein | |
| PA2732 | 0 | 16 | -3.054851 | hypothetical protein | |
| PA2730 | 3 | 19 | 0.042348 | hypothetical protein | |
| PA2729 | 3 | 22 | 2.854165 | hypothetical protein | |
| PA2726 | 0 | 14 | 2.049551 | radical activating enzyme | |
| PA2725 | 2 | 12 | 1.575056 | chaperone |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2738 | DNABINDINGHU | 113 | 1e-36 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2729 | RTXTOXIND | 30 | 0.024 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2725 | HTHFIS | 32 | 0.010 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 34 | PA2626 | PA2621 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2626 | 0 | 14 | -3.214368 | tRNA-specific 2-thiouridylase MnmA | |
| PA2625 | 0 | 10 | -3.282541 | hypothetical protein | |
| PA2624 | 0 | 10 | -3.962797 | isocitrate dehydrogenase | |
| PA2623 | 0 | 12 | -4.094723 | isocitrate dehydrogenase | |
| PA2622 | -2 | 12 | -3.449019 | cold-shock protein CspD | |
| PA2621 | -2 | 8 | -3.332421 | ATP-dependent Clp protease adapter protein Clp |
| 35 | PA2586 | PA2570 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2586 | 0 | 23 | -3.639127 | response regulator GacA | |
| PA2585 | 0 | 24 | -3.661708 | excinuclease ABC subunit C | |
| PA2584 | 0 | 26 | -4.216371 | CDP-diacylglycerol--glycerol-3-phosphate | |
| PA2583 | 0 | 27 | -3.912096 | *sensor/response regulator hybrid protein | |
| PA2582 | 0 | 20 | -3.589200 | hypothetical protein | |
| PA2581 | -1 | 17 | -3.081089 | *hypothetical protein | |
| PA2580 | -1 | 14 | -2.307183 | hypothetical protein | |
| PA2579 | -1 | 15 | -2.547434 | tryptophan 2,3-dioxygenase | |
| PA2578 | 0 | 13 | -1.991188 | acetyltransferase | |
| PA2577 | -1 | 10 | -2.408895 | transcriptional regulator | |
| PA2576 | -1 | 13 | -2.455654 | hypothetical protein | |
| PA2575 | -1 | 16 | -3.387552 | hypothetical protein | |
| PA2574 | 0 | 18 | -3.412696 | alkane-1 monooxygenase | |
| PA2573 | 1 | 20 | -3.260701 | chemotaxis transducer | |
| PA2572 | 1 | 20 | -3.343611 | two-component response regulator | |
| PA2571 | 2 | 23 | -3.333640 | two-component sensor | |
| PA2570 | 0 | 22 | -3.290869 | *PA-I galactophilic lectin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2586 | HTHFIS | 73 | 4e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2583 | HTHFIS | 65 | 5e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2578 | SACTRNSFRASE | 36 | 4e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2572 | HTHFIS | 106 | 6e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2571 | PF06580 | 35 | 5e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 36 | PA2528 | PA2515 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2528 | 2 | 14 | 0.878520 | resistance-nodulation-cell division (RND) efflux | |
| PA2527 | 2 | 14 | 1.300406 | resistance-nodulation-cell division (RND) efflux | |
| PA2526 | 1 | 12 | 1.840520 | resistance-nodulation-cell division (RND) efflux | |
| PA2525 | 0 | 12 | 1.818934 | hypothetical protein | |
| PA2524 | -1 | 11 | 1.712362 | two-component sensor | |
| PA2523 | -1 | 12 | 1.387825 | two-component response regulator | |
| PA2522 | 0 | 12 | 1.393460 | outer membrane protein CzcC | |
| PA2521 | -1 | 12 | 1.146264 | resistance-nodulation-cell division (RND) | |
| PA2520 | 0 | 13 | 0.982726 | resistance-nodulation-cell division (RND) | |
| PA2519 | 3 | 14 | 1.684524 | transcriptional regulator XylS | |
| PA2518 | 4 | 14 | 1.395226 | toluate 1,2-dioxygenase subunit alpha | |
| PA2517 | 3 | 14 | 1.250129 | toluate 1,2-dioxygenase subunit beta | |
| PA2516 | 2 | 13 | 1.691027 | toluate 1,2-dioxygenase electron transfer | |
| PA2515 | 2 | 12 | 1.836580 | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2528 | RTXTOXIND | 45 | 5e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2527 | ACRIFLAVINRP | 840 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2526 | ACRIFLAVINRP | 816 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2525 | RTXTOXIND | 38 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2524 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2523 | HTHFIS | 81 | 7e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2521 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2520 | ACRIFLAVINRP | 811 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2515 | DHBDHDRGNASE | 101 | 5e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 37 | PA2489 | PA2458 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2489 | 2 | 14 | 2.569103 | transcriptional regulator | |
| PA2488 | 2 | 13 | 1.268749 | transcriptional regulator | |
| PA2487 | 1 | 14 | 0.538169 | hypothetical protein | |
| PA2486 | 0 | 13 | 0.560433 | hypothetical protein | |
| PA2485 | 1 | 9 | 1.932561 | hypothetical protein | |
| PA2484 | 1 | 8 | 2.539537 | hypothetical protein | |
| PA2483 | 2 | 9 | 3.130046 | hypothetical protein | |
| PA2482 | 3 | 8 | 3.520779 | cytochrome C | |
| PA2481 | 3 | 10 | 3.333775 | hypothetical protein | |
| PA2480 | 2 | 9 | 3.549145 | two-component sensor | |
| PA2479 | 1 | 9 | 2.780840 | two-component response regulator | |
| PA2478 | 1 | 9 | 2.655954 | thiol:disulfide interchange protein DsbD | |
| PA2477 | 0 | 7 | 2.572398 | thiol:disulfide interchange protein | |
| PA2476 | 0 | 9 | 2.593850 | thiol:disulfide interchange protein DsbG | |
| PA2475 | -1 | 11 | 2.827665 | cytochrome P450 | |
| PA2474 | 0 | 12 | 3.059386 | hypothetical protein | |
| PA2473 | 0 | 12 | 3.347513 | glutathione S-transferase | |
| PA2472 | 1 | 12 | 3.797488 | major facilitator superfamily transporter | |
| PA2471 | 1 | 12 | 1.933873 | hypothetical protein | |
| PA2470 | 1 | 10 | 1.723825 | gentisate 1,2-dioxygenase | |
| PA2469 | 1 | 10 | 1.584802 | transcriptional regulator | |
| PA2468 | 2 | 12 | 1.472584 | ECF sigma factor FoxI | |
| PA2467 | 1 | 15 | -1.041604 | anti-sigma factor FoxR | |
| PA2466 | 1 | 18 | -1.872682 | ferrioxamine receptor FoxA | |
| PA2465 | 2 | 21 | -2.153053 | hypothetical protein | |
| PA2464 | 2 | 25 | -3.017064 | hypothetical protein | |
| PA2463 | 2 | 24 | -2.964460 | hypothetical protein | |
| PA2462 | 2 | 27 | -3.709424 | hypothetical protein | |
| PA2461 | 7 | 42 | -10.254821 | hypothetical protein | |
| PA2460 | 6 | 27 | -5.824159 | hypothetical protein | |
| PA2459 | 6 | 26 | -5.290671 | hypothetical protein | |
| PA2458 | 4 | 20 | -0.943252 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2484 | HTHTETR | 52 | 2e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2479 | HTHFIS | 83 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2472 | TCRTETB | 49 | 3e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2469 | MPTASEINHBTR | 28 | 0.030 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2466 | TYPE3OMGPROT | 34 | 0.002 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2462 | PF05860 | 82 | 5e-20 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| 38 | PA2444 | PA2435 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2444 | -2 | 7 | 3.236644 | serine hydroxymethyltransferase | |
| PA2443 | -1 | 7 | 3.869451 | L-serine dehydratase | |
| PA2442 | 1 | 7 | 4.661091 | glycine cleavage system protein T2 | |
| PA2441 | 1 | 7 | 4.462118 | hypothetical protein | |
| PA2440 | 2 | 10 | 4.865266 | hypothetical protein | |
| PA2439 | 3 | 11 | 5.068923 | hypothetical protein | |
| PA2438 | 4 | 12 | 4.337545 | hypothetical protein | |
| PA2437 | 3 | 10 | 3.593417 | hypothetical protein | |
| PA2436 | 3 | 13 | 2.814302 | hypothetical protein | |
| PA2435 | 3 | 13 | 2.903778 | cation-transporting P-type ATPase |
| 39 | PA2366 | PA2361 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2366 | 2 | 9 | 1.210345 | uricase | |
| PA2365 | 4 | 11 | 2.013800 | hypothetical protein | |
| PA2364 | 4 | 11 | 2.124463 | hypothetical protein | |
| PA2363 | 4 | 11 | 2.339853 | hypothetical protein | |
| PA2362 | 4 | 12 | 1.896581 | hypothetical protein | |
| PA2361 | 2 | 10 | 1.844332 | hypothetical protein |
| 40 | PA2318 | PA2288 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2318 | 3 | 10 | 1.531752 | hypothetical protein | |
| PA2317 | 3 | 9 | 1.612943 | oxidoreductase | |
| PA2316 | 6 | 12 | 2.531353 | transcriptional regulator | |
| PA2315 | 6 | 11 | 2.118932 | hypothetical protein | |
| PA2314 | 5 | 12 | 1.234355 | major facilitator superfamily transporter | |
| PA2312a | 3 | 11 | 0.035343 | hypothetical protein | |
| PA2312 | -2 | 13 | 1.273819 | transcriptional regulator | |
| PA2311 | -2 | 15 | 0.737157 | hypothetical protein | |
| PA2310 | -1 | 12 | 2.975664 | hypothetical protein | |
| PA2309 | -1 | 12 | 3.220125 | hypothetical protein | |
| PA2308 | -1 | 11 | 3.331333 | ABC transporter ATP-binding protein | |
| PA2307 | -1 | 10 | 4.154194 | ABC transporter permease | |
| PA2306 | -1 | 10 | 4.356090 | protein AmbA | |
| PA2305 | -1 | 9 | 4.247804 | protein AmbB | |
| PA2304 | -1 | 10 | 3.536290 | protein AmbC | |
| PA2303 | -1 | 9 | 3.042394 | protein AmbD | |
| PA2302 | -2 | 9 | 3.036380 | protein AmbE | |
| PA2301 | -2 | 10 | 0.441915 | hypothetical protein | |
| PA2300 | -1 | 9 | 0.436054 | chitinase | |
| PA2299 | -1 | 10 | 1.015929 | transcriptional regulator | |
| PA2298 | 0 | 9 | 2.162324 | oxidoreductase | |
| PA2297 | 0 | 11 | 3.178105 | ferredoxin | |
| PA2296 | -2 | 12 | 2.281424 | hypothetical protein | |
| PA2295 | 0 | 12 | 2.643493 | ABC transporter permease | |
| PA2294 | 1 | 11 | 2.033791 | ABC transporter ATP-binding protein | |
| PA2293 | 2 | 12 | 1.903472 | hypothetical protein | |
| PA2292 | 2 | 12 | 1.226892 | hypothetical protein | |
| PA2291 | 2 | 10 | 1.780197 | glucose-sensitive porin | |
| PA2290 | 1 | 9 | 2.116183 | glucose dehydrogenase | |
| PA2289 | 0 | 10 | 2.340711 | hypothetical protein | |
| PA2288 | 1 | 12 | 3.197810 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2314 | TCRTETB | 45 | 3e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 41 | PA2246 | PA2222 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2246 | 2 | 8 | 2.603927 | Bkd operon transcriptional regulator BkdR | |
| PA2244 | 1 | 8 | 3.044203 | hypothetical protein | |
| PA2243 | 2 | 8 | 3.065382 | FAD-binding dehydrogenase | |
| PA2242 | 2 | 8 | 1.959060 | hypothetical protein | |
| PA2241 | 2 | 8 | 2.884712 | biofilm formation protein PslL | |
| PA2240 | -1 | 9 | 1.461096 | biofilm formation protein PslJ | |
| PA2239 | -1 | 9 | 1.316005 | biofilm formation protein PslI | |
| PA2238 | -1 | 9 | 1.092507 | biofilm formation protein PslH | |
| PA2237 | -1 | 11 | 0.777979 | biofilm formation protein PslG | |
| PA2236 | -2 | 10 | 0.116357 | biofilm formation protein PslF | |
| PA2235 | -2 | 11 | -0.613174 | biofilm formation protein PslE | |
| PA2234 | -1 | 13 | 0.180007 | biofilm formation protein PslD | |
| PA2233 | 1 | 17 | -3.432927 | biofilm formation protein PslC | |
| PA2232 | 2 | 28 | -7.087830 | biofilm formation protein PslB | |
| PA2231 | 3 | 43 | -10.760740 | biofilm formation protein PslA | |
| PA2230 | 5 | 60 | -13.044557 | hypothetical protein | |
| PA2229 | 4 | 72 | -16.266925 | hypothetical protein | |
| PA2228 | 4 | 80 | -18.874836 | hypothetical protein | |
| PA2227 | 3 | 77 | -18.332002 | HTH-type transcriptional regulator VqsM | |
| PA2226 | 2 | 66 | -14.247019 | hypothetical protein | |
| PA2225 | 1 | 55 | -11.640590 | hypothetical protein | |
| PA2224 | 1 | 49 | -9.768611 | hypothetical protein | |
| PA2223 | 1 | 41 | -7.545321 | hypothetical protein | |
| PA2222 | 1 | 28 | -3.831327 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2236 | TCRTETOQM | 29 | 0.035 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2235 | YERSSTKINASE | 34 | 0.002 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 42 | PA2133 | PA2091 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2133 | 3 | 10 | 2.094186 | hypothetical protein | |
| PA2132 | 3 | 10 | 1.463637 | chaperone CupA5 | |
| PA2131 | 3 | 10 | 1.064968 | fimbrial subunit CupA4 | |
| PA2130 | 2 | 7 | 1.364387 | usher CupA3 | |
| PA2129 | 1 | 7 | 2.183426 | chaperone CupA2 | |
| PA2128 | 0 | 7 | 2.277121 | fimbrial subunit CupA1 | |
| PA2127 | 0 | 8 | 2.388492 | hypothetical protein | |
| PA2126 | -1 | 9 | 2.929419 | hypothetical protein | |
| PA2125 | -1 | 9 | 3.069224 | aldehyde dehydrogenase | |
| PA2124 | 0 | 11 | 2.033785 | dehydrogenase | |
| PA2123 | -1 | 10 | 0.921822 | transcriptional regulator | |
| PA2122 | 0 | 9 | 1.513860 | hypothetical protein | |
| PA2121 | 1 | 10 | 1.263162 | transcriptional regulator | |
| PA2120 | 3 | 10 | 1.196028 | hypothetical protein | |
| PA2119 | 1 | 11 | 1.140801 | alcohol dehydrogenase | |
| PA2118a | 0 | 12 | 1.576726 | hypothetical protein | |
| PA2118 | 1 | 11 | 1.618096 | O6-methylguanine-DNA methyltransferase | |
| PA2117 | 0 | 12 | 1.518023 | hypothetical protein | |
| PA2116 | -1 | 11 | 2.032007 | hypothetical protein | |
| PA2115 | -2 | 12 | 2.806764 | transcriptional regulator | |
| PA2114 | -1 | 14 | 3.117617 | major facilitator superfamily transporter | |
| PA2113 | -1 | 9 | 3.388550 | pyroglutatmate porin OpdO | |
| PA2112 | 2 | 9 | 4.066356 | hypothetical protein | |
| PA2111 | 1 | 10 | 2.268935 | hypothetical protein | |
| PA2110 | 2 | 17 | 0.287582 | hypothetical protein | |
| PA2109 | 2 | 26 | -2.929978 | hypothetical protein | |
| PA2108 | 2 | 30 | -4.383738 | thiamine pyrophosphate protein | |
| PA2107 | 2 | 44 | -7.442946 | hypothetical protein | |
| PA2106 | 1 | 45 | -8.976086 | hypothetical protein | |
| PA2105 | 1 | 44 | -8.683371 | acetyltransferase | |
| PA2104 | 0 | 38 | -6.999557 | cysteine synthase | |
| PA2103 | 0 | 30 | -3.923237 | molybdopterin biosynthesis protein MoeB | |
| PA2102 | 0 | 22 | -2.069896 | hypothetical protein | |
| PA2101 | 0 | 17 | -0.596330 | hypothetical protein | |
| PA2100 | -1 | 13 | 1.116680 | transcriptional regulator | |
| PA2099 | 0 | 9 | 3.794332 | short-chain dehydrogenase | |
| PA2098 | 0 | 8 | 3.317047 | esterase | |
| PA2097 | 0 | 8 | 3.017147 | flavin-binding monooxygenase | |
| PA2096 | 3 | 11 | 3.990916 | transcriptional regulator | |
| PA2095 | 1 | 12 | 4.160973 | hypothetical protein | |
| PA2094 | 2 | 8 | 3.379697 | transmembrane sensor | |
| PA2093 | 0 | 8 | 3.012122 | RNA polymerase sigma factor | |
| PA2092 | 0 | 9 | 3.386063 | major facilitator superfamily transporter | |
| PA2091 | 1 | 9 | 3.012682 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2130 | PF00577 | 772 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2114 | TCRTETB | 39 | 3e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2099 | DHBDHDRGNASE | 85 | 6e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2092 | TCRTETA | 55 | 2e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2091 | TCRTETA | 29 | 0.035 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 43 | PA2042 | PA2031 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2042 | 2 | 22 | -6.523087 | serine/threonine transporter SstT | |
| PA2041 | 3 | 31 | -8.637149 | amino acid permease | |
| PA2040 | 3 | 29 | -6.331772 | glutamine synthetase | |
| PA2039 | 5 | 35 | -5.794140 | hypothetical protein | |
| PA2038 | 6 | 34 | -5.343721 | hypothetical protein | |
| PA2037 | 5 | 28 | -4.022305 | hypothetical protein | |
| PA2036 | 1 | 12 | 0.539465 | hypothetical protein | |
| PA2035 | 1 | 10 | 2.251782 | thiamine pyrophosphate protein | |
| PA2034 | 1 | 13 | 1.761129 | hypothetical protein | |
| PA2033 | 3 | 12 | -0.047134 | hypothetical protein | |
| PA2032 | 2 | 13 | -0.617826 | transcriptional regulator | |
| PA2031 | 2 | 13 | -1.309285 | hypothetical protein |
| 44 | PA1913 | PA1899 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1913 | 1 | 11 | 3.081395 | hypothetical protein | |
| PA1912 | 0 | 10 | 3.420620 | ECF sigma factor FemI | |
| PA1911 | 0 | 10 | 3.355207 | sigma factor regulator FemR | |
| PA1910 | -1 | 9 | 2.929802 | ferric-mycobactin receptor FemA | |
| PA1909 | -1 | 10 | 3.227607 | hypothetical protein | |
| PA1908 | -2 | 10 | 3.786779 | major facilitator superfamily transporter | |
| PA1907 | -2 | 12 | 3.189495 | hypothetical protein | |
| PA1906 | 0 | 14 | 3.547185 | hypothetical protein | |
| PA1905 | 0 | 14 | 2.774157 | pyridoxamine 5'-phosphate oxidase | |
| PA1904 | -1 | 12 | 1.712767 | trans-2,3-dihydro-3-hydroxyanthranilate | |
| PA1903 | 0 | 10 | -0.249060 | phenazine biosynthesis protein PhzE | |
| PA1902 | 0 | 10 | -2.581052 | phenazine biosynthesis protein PhzD | |
| PA1901 | 1 | 11 | -2.964249 | phenazine biosynthesis protein PhzC | |
| PA1900 | -1 | 14 | -4.811122 | phenazine biosynthesis protein PhzB | |
| PA1899 | 0 | 13 | -4.247075 | phenazine biosynthesis protein PhzA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1908 | TCRTETA | 99 | 7e-25 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1902 | ISCHRISMTASE | 351 | e-125 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| 45 | PA1879 | PA1845 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1879 | 4 | 11 | 1.802523 | hypothetical protein | |
| PA1878 | 4 | 11 | 1.511438 | hypothetical protein | |
| PA1877 | 4 | 11 | 1.487911 | secretion protein | |
| PA1876 | 4 | 10 | 1.470938 | ABC transporter ATP-binding protein/permease | |
| PA1875 | 4 | 11 | 1.300377 | hypothetical protein | |
| PA1874 | 5 | 13 | 1.242717 | hypothetical protein | |
| PA1873 | 0 | 10 | 0.565538 | hypothetical protein | |
| PA1872 | 1 | 13 | 1.251221 | hypothetical protein | |
| PA1871 | 1 | 14 | 1.494172 | protease LasA | |
| PA1870 | -1 | 11 | 2.139076 | hypothetical protein | |
| PA1869 | 0 | 9 | 1.795612 | acyl carrier protein | |
| PA1868 | 1 | 8 | 2.155261 | secretion protein XqhA | |
| PA1867 | 4 | 9 | 1.592283 | type VI pilus biosynthesis protein | |
| PA1866a | 2 | 8 | 1.315822 | hypothetical protein | |
| PA1866 | 1 | 7 | 1.388538 | hypothetical protein | |
| PA1865 | 0 | 9 | 1.093277 | Fanconi-associated nuclease | |
| PA1864 | 0 | 11 | 1.226685 | transcriptional regulator | |
| PA1863 | 0 | 10 | 1.068263 | molybdenum ABC transporter substrate-binding | |
| PA1862 | 0 | 9 | 1.151907 | molybdenum ABC transporter permease ModB | |
| PA1861 | 2 | 8 | 0.261374 | molybdenum ABC transporter ATP-binding protein | |
| PA1860 | 3 | 9 | 0.153898 | hypothetical protein | |
| PA1859 | 3 | 10 | 0.334722 | transcriptional regulator | |
| PA1858 | 2 | 8 | 0.411900 | streptomycin 3''-phosphotransferase | |
| PA1857 | 3 | 10 | -0.079752 | hypothetical protein | |
| PA1856 | 4 | 9 | -0.063387 | cbb3-type cytochrome C oxidase subunit I | |
| PA1855 | 1 | 8 | 1.540168 | hypothetical protein | |
| PA1854 | 2 | 8 | 1.468069 | hypothetical protein | |
| PA1853 | 2 | 9 | 1.861964 | transcriptional regulator | |
| PA1852 | 1 | 10 | 1.094053 | hypothetical protein | |
| PA1851 | -1 | 8 | 0.311245 | hypothetical protein | |
| PA1850 | -1 | 9 | 0.147722 | transcriptional regulator | |
| PA1849 | -1 | 9 | -0.545917 | hypothetical protein | |
| PA1848 | -1 | 9 | -1.130247 | major facilitator superfamily transporter | |
| PA1847 | 1 | 10 | -1.864222 | Fe/S biogenesis protein NfuA | |
| PA1846 | 1 | 10 | -1.675377 | cis/trans isomerase | |
| PA1845 | 2 | 12 | -2.011071 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1877 | RTXTOXIND | 296 | 9e-99 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1875 | RTXTOXIND | 31 | 0.009 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1874 | CABNDNGRPT | 49 | 2e-07 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1868 | BCTERIALGSPD | 591 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1864 | HTHTETR | 65 | 3e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 46 | PA1808 | PA1797a | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1808 | 1 | 9 | -3.276195 | ABC transporter permease | |
| PA1807 | 1 | 11 | -4.196757 | ABC transporter ATP-binding protein | |
| PA1806 | 1 | 13 | -5.077674 | NADH-dependent enoyl-ACP reductase | |
| PA1805 | 2 | 15 | -5.920147 | peptidyl-prolyl cis-trans isomerase D | |
| PA1804 | 1 | 17 | -6.221004 | *DNA-binding protein HU | |
| PA1803 | 1 | 14 | -5.340824 | Lon protease | |
| PA1802 | 0 | 17 | -4.071556 | ATP-dependent protease ATP-binding subunit ClpX | |
| PA1801 | 0 | 17 | -3.254285 | ATP-dependent Clp protease proteolytic subunit | |
| PA1800 | 0 | 17 | -2.371241 | trigger factor | |
| PA1799 | -1 | 10 | -1.172844 | two-component response regulator ParR | |
| PA1798 | -1 | 9 | -1.385429 | two-component sensor ParS | |
| PA1797 | 0 | 10 | -1.866284 | hypothetical protein | |
| PA1797a | 2 | 9 | -2.114562 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1806 | DHBDHDRGNASE | 63 | 9e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1804 | DNABINDINGHU | 117 | 1e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1799 | HTHFIS | 77 | 2e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1798 | PF06580 | 29 | 0.026 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 47 | PA1778 | PA1766 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1778 | 1 | 22 | -4.174899 | uroporphyrin-III C-methyltransferase | |
| PA1777 | 3 | 21 | -5.028938 | outer membrane porin F | |
| PA1776 | -1 | 22 | -2.917257 | RNA polymerase sigma factor SigX | |
| PA1775 | 0 | 13 | -2.218640 | hypothetical protein | |
| PA1774 | 2 | 12 | -2.957515 | hypothetical protein | |
| PA1773 | 3 | 13 | -3.213360 | transporter | |
| PA1772 | 2 | 12 | -3.813469 | ribonuclease activity regulator protein RraA | |
| PA1771 | 2 | 10 | -3.738347 | hydrolase | |
| PA1770 | 1 | 12 | -3.889539 | phosphoenolpyruvate synthase | |
| PA1769 | 0 | 10 | -4.181032 | phosphoenolpyruvate synthase regulatory protein | |
| PA1768 | 0 | 9 | -3.694130 | hypothetical protein | |
| PA1767 | 0 | 8 | -3.664277 | hypothetical protein | |
| PA1766 | 1 | 10 | -3.307077 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1777 | OMPADOMAIN | 163 | 1e-49 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1770 | PHPHTRNFRASE | 317 | e-101 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| 48 | PA1725 | PA1694 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1725 | 4 | 17 | -0.010990 | type III secretion system protein | |
| PA1724 | 4 | 18 | -0.816155 | type III export protein PscK | |
| PA1723 | 3 | 18 | -1.434019 | type III export protein PscJ | |
| PA1722 | 3 | 15 | 0.101276 | type III export protein PscI | |
| PA1721 | 1 | 15 | 0.316708 | type III export protein PscH | |
| PA1720 | 1 | 16 | 0.687469 | type III export protein PscG | |
| PA1719 | 1 | 15 | 0.631796 | type III export protein PscF | |
| PA1718 | 0 | 16 | -0.544588 | type III export protein PscE | |
| PA1717 | -1 | 16 | -0.560341 | type III export protein PscD | |
| PA1716 | -2 | 19 | -0.884258 | type III secretion outer membrane protein PscC | |
| PA1715 | 1 | 28 | -2.025533 | type III export apparatus protein | |
| PA1714 | 2 | 25 | -2.322608 | hypothetical protein | |
| PA1713 | 3 | 25 | -2.766279 | exoenzyme S transcriptional regulator ExsA | |
| PA1712 | 2 | 22 | -1.035002 | exoenzyme S synthesis protein ExsB | |
| PA1711 | 2 | 19 | -1.553346 | hypothetical protein | |
| PA1710 | 2 | 17 | -1.564270 | exoenzyme S synthesis protein ExsC | |
| PA1709 | 2 | 16 | -0.632473 | translocator outer membrane protein PopD | |
| PA1708 | 3 | 13 | -1.043018 | translocator protein PopB | |
| PA1707 | 3 | 14 | -0.598363 | regulatory protein PcrH | |
| PA1706 | 4 | 15 | -0.037941 | type III secretion protein PcrV | |
| PA1705 | 5 | 15 | 0.964709 | type III secretion regulator | |
| PA1704 | 5 | 16 | 0.433366 | transcriptional regulator PcrR | |
| PA1703 | 5 | 15 | 0.572129 | type III secretory apparatus protein PcrD | |
| PA1702 | 4 | 12 | 2.140346 | hypothetical protein | |
| PA1701 | 3 | 11 | 2.062573 | hypothetical protein | |
| PA1700 | 3 | 17 | 2.469445 | hypothetical protein | |
| PA1699 | 2 | 17 | 2.599647 | hypothetical protein | |
| PA1698 | 1 | 16 | 2.159758 | type III secretion outer membrane protein PopN | |
| PA1697 | 0 | 16 | 1.821438 | type III secretion system ATPase | |
| PA1696 | 3 | 17 | 1.474566 | translocation protein in type III secretion | |
| PA1695 | 2 | 18 | 0.344332 | translocation protein in type III secretion | |
| PA1694 | 2 | 11 | -1.179490 | type III secretion system protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1725 | TYPE4SSCAGX | 30 | 0.009 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1723 | FLGMRINGFLIF | 75 | 1e-17 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1721 | PF09025 | 205 | 2e-71 | YopR Core | |
>PF09025#YopR Core | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1716 | TYPE3OMGPROT | 816 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1715 | PF05932 | 93 | 2e-27 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1710 | PF05932 | 47 | 7e-10 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1709 | PF05844 | 385 | e-137 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1707 | SYCDCHAPRONE | 208 | 4e-72 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1706 | LCRVANTIGEN | 344 | e-121 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1698 | PF07201 | 284 | 4e-98 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1695 | IGASERPTASE | 40 | 1e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1694 | TYPE3OMOPROT | 83 | 2e-20 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| 49 | PA1589 | PA1581 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1589 | 2 | 23 | -3.393867 | succinyl-CoA ligase subunit alpha | |
| PA1588 | 2 | 23 | -3.222138 | succinyl-CoA ligase subunit beta | |
| PA1587 | 3 | 22 | -3.267777 | 2-oxoglutarate dehydrogenase complex | |
| PA1586 | 2 | 21 | -3.708620 | 2-oxoglutarate dehydrogenase complex | |
| PA1585 | 2 | 19 | -4.499333 | 2-oxoglutarate dehydrogenase subunit E1 | |
| PA1584 | 2 | 17 | -4.813957 | succinate dehydrogenase iron-sulfur subunit | |
| PA1583 | 1 | 17 | -4.399258 | succinate dehydrogenase flavoprotein subunit | |
| PA1582 | -1 | 13 | -3.546604 | succinate dehydrogenase subunit D | |
| PA1581 | -2 | 12 | -3.514304 | succinate dehydrogenase subunit C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1587 | ABC2TRNSPORT | 30 | 0.024 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 50 | PA1558 | PA1554 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1558 | 4 | 14 | -2.791822 | hypothetical protein | |
| PA1557 | 5 | 17 | -4.034281 | cbb3-type cytochrome C oxidase subunit I | |
| PA1556 | 3 | 17 | -4.718991 | cbb3-type cytochrome C oxidase subunit II | |
| PA1555.1 | 3 | 19 | -4.213396 | cytochrome C oxidase cbb3-type subunit CcoQ | |
| PA1555 | 2 | 17 | -3.873004 | cytochrome C oxidase cbb3-type subunit CcoP | |
| PA1554 | 2 | 16 | -3.816497 | cbb3-type cytochrome C oxidase subunit I |
| 51 | PA1515 | PA1503 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1515 | 1 | 15 | -3.431347 | allantoicase | |
| PA1514 | 0 | 25 | -5.834300 | ureidoglycolate hydrolase | |
| PA1513 | 1 | 26 | -5.825023 | hypothetical protein | |
| PA1512 | 1 | 24 | -5.415960 | secreted protein Hcp | |
| PA1511 | 1 | 26 | -5.311233 | hypothetical protein | |
| PA1510 | 2 | 30 | -6.308561 | hypothetical protein | |
| PA1509 | 0 | 18 | -4.195045 | hypothetical protein | |
| PA1508 | 3 | 9 | -0.142295 | hypothetical protein | |
| PA1507 | 2 | 12 | 0.051247 | transporter | |
| PA1506 | -1 | 12 | -0.187069 | hypothetical protein | |
| PA1505 | 0 | 15 | -0.362396 | cyclic pyranopterin monophosphate synthase | |
| PA1504 | 0 | 15 | 0.028329 | transcriptional regulator | |
| PA1503 | 2 | 14 | 0.635277 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1508 | OMADHESIN | 25 | 0.048 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1504 | HTHTETR | 71 | 2e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 52 | PA1480 | PA1474 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1480 | 2 | 10 | 0.495704 | cytochrome c-type biogenesis protein CcmF | |
| PA1479 | 6 | 10 | 0.212261 | cytochrome c-type biogenesis protein CcmE | |
| PA1478 | 6 | 10 | 0.529180 | heme exporter protein CcmD | |
| PA1477 | 6 | 9 | 0.332673 | heme exporter protein CcmC | |
| PA1476 | 8 | 11 | 0.773063 | heme exporter protein CcmB | |
| PA1475 | 5 | 10 | 1.483241 | cytochrome c biogenesis ATP-binding export | |
| PA1474 | 2 | 9 | 1.424758 | hypothetical protein |
| 53 | PA1461 | PA1447 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1461 | 2 | 12 | -1.202708 | flagellar motor protein MotD | |
| PA1460 | 1 | 12 | -1.336459 | flagellar motor protein | |
| PA1459 | 1 | 12 | -1.567433 | chemotaxis-specific methylesterase | |
| PA1458 | -1 | 11 | -1.282274 | two-component sensor | |
| PA1457 | 0 | 9 | -1.592002 | protein phosphatase CheZ | |
| PA1456 | 0 | 13 | -0.459239 | chemotaxis protein CheY | |
| PA1455 | 0 | 15 | 0.181610 | flagellar biosynthesis sigma factor FliA | |
| PA1454 | 1 | 15 | 0.411224 | flagellar synthesis regulator FleN | |
| PA1453 | 2 | 17 | 0.557393 | flagellar biosynthesis regulator FlhF | |
| PA1452 | 3 | 17 | 0.118638 | flagellar biosynthesis protein FlhA | |
| PA1451 | 3 | 20 | 0.158947 | hypothetical protein | |
| PA1450 | 4 | 19 | 0.004032 | hypothetical protein | |
| PA1449 | 6 | 19 | -0.669460 | flagellar biosynthesis protein FlhB | |
| PA1448 | 6 | 18 | -1.377531 | flagellar biosynthesis protein FliR | |
| PA1447 | 3 | 16 | -1.847776 | flagellar biosynthesis protein FliQ |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1461 | OMPADOMAIN | 69 | 1e-15 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1459 | HTHFIS | 58 | 2e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1458 | PF06580 | 42 | 7e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1456 | HTHFIS | 90 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1451 | cloacin | 30 | 0.022 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1450 | cloacin | 36 | 3e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1449 | TYPE3IMSPROT | 336 | e-116 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1448 | TYPE3IMRPROT | 134 | 1e-40 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1447 | TYPE3IMQPROT | 55 | 9e-14 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| 54 | PA1408 | PA1369 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1408 | 2 | 9 | 2.003779 | hypothetical protein | |
| PA1407 | 3 | 9 | 1.834168 | hypothetical protein | |
| PA1406 | 2 | 10 | 1.587043 | hypothetical protein | |
| PA1405 | -1 | 10 | 2.724027 | helicase | |
| PA1404 | -1 | 10 | 3.156832 | hypothetical protein | |
| PA1403 | 0 | 10 | 3.138356 | transcriptional regulator | |
| PA1402 | 0 | 10 | 3.122376 | hypothetical protein | |
| PA1401 | 0 | 10 | 2.837402 | hypothetical protein | |
| PA1400 | 0 | 10 | 2.570246 | pyruvate carboxylase | |
| PA1399 | 0 | 13 | 1.539154 | transcriptional regulator | |
| PA1398 | 0 | 16 | -1.084702 | hypothetical protein | |
| PA1397 | 0 | 22 | -2.630059 | two-component response regulator | |
| PA1396 | -2 | 29 | -3.350014 | two-component sensor | |
| PA1395 | 0 | 40 | -5.283136 | hypothetical protein | |
| PA1394 | 1 | 43 | -5.264326 | hypothetical protein | |
| PA1393 | 1 | 44 | -5.925527 | adenylyl-sulfate kinase | |
| PA1392 | 0 | 45 | -5.778384 | hypothetical protein | |
| PA1391 | 1 | 46 | -7.048675 | glycosyl transferase family protein | |
| PA1390 | 2 | 51 | -9.405668 | glycosyl transferase family protein | |
| PA1389 | 2 | 54 | -10.170015 | glycosyl transferase family protein | |
| PA1388 | 2 | 50 | -10.649001 | hypothetical protein | |
| PA1387 | 2 | 48 | -10.034908 | hypothetical protein | |
| PA1386 | 3 | 49 | -10.393835 | ABC transporter ATP-binding protein | |
| PA1385 | 2 | 42 | -8.220356 | glycosyl transferase family protein | |
| PA1384 | 1 | 33 | -5.819088 | UDP-glucose 4-epimerase | |
| PA1383 | 1 | 27 | -4.924545 | hypothetical protein | |
| PA1382 | -1 | 24 | -3.250018 | type II secretion system protein | |
| PA1381 | -2 | 14 | -0.793694 | hypothetical protein | |
| PA1380 | -1 | 14 | 1.215340 | transcriptional regulator | |
| PA1379 | -2 | 14 | 1.055476 | short-chain dehydrogenase | |
| PA1378 | -2 | 15 | 1.817305 | hypothetical protein | |
| PA1377 | 4 | 29 | -5.323086 | hypothetical protein | |
| PA1376 | 6 | 36 | -7.764398 | bifunctional isocitrate dehydrogenase | |
| PA1375 | 7 | 54 | -11.167212 | erythronate-4-phosphate dehydrogenase | |
| PA1374 | 8 | 66 | -15.268484 | hypothetical protein | |
| PA1373 | 5 | 63 | -15.063900 | 3-oxoacyl-ACP synthase | |
| PA1372 | 5 | 69 | -16.760539 | hypothetical protein | |
| PA1371 | 3 | 55 | -13.945092 | hypothetical protein | |
| PA1370 | 1 | 34 | -8.816157 | hypothetical protein | |
| PA1369 | 0 | 22 | -5.523650 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1408 | RTXTOXIND | 39 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1403 | HTHTETR | 58 | 7e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1400 | RTXTOXIND | 37 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1397 | HTHFIS | 57 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1396 | HTHFIS | 50 | 2e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1384 | NUCEPIMERASE | 184 | 8e-58 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1382 | BCTERIALGSPD | 197 | 3e-56 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1379 | DHBDHDRGNASE | 110 | 3e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1377 | SACTRNSFRASE | 37 | 9e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 55 | PA1322 | PA1316 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1322 | 2 | 12 | -2.623018 | TonB-dependent receptor | |
| PA1321 | 2 | 12 | -1.932818 | protoheme IX farnesyltransferase | |
| PA1320 | 2 | 12 | -1.948975 | cytochrome o ubiquinol oxidase subunit IV | |
| PA1319 | 1 | 11 | -1.676573 | cytochrome o ubiquinol oxidase subunit III | |
| PA1318 | 2 | 11 | -0.590805 | cytochrome o ubiquinol oxidase subunit I | |
| PA1317 | 2 | 12 | 1.214664 | cytochrome o ubiquinol oxidase subunit II | |
| PA1316 | 2 | 12 | 2.240044 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1322 | ENTEROVIROMP | 29 | 0.034 | Enterobacterial virulence outer membrane protein si... | |
>ENTEROVIROMP#Enterobacterial virulence outer membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1316 | TCRTETB | 107 | 3e-27 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 56 | PA1299 | PA1255 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1299 | 2 | 10 | 0.397917 | hypothetical protein | |
| PA1298 | 1 | 9 | 0.388755 | hypothetical protein | |
| PA1297 | 0 | 9 | 0.615761 | metal transporter | |
| PA1296 | -2 | 12 | 0.509237 | 2-hydroxyacid dehydrogenase | |
| PA1295 | -1 | 13 | 0.056072 | hypothetical protein | |
| PA1294 | -1 | 11 | 0.701475 | ribonuclease D | |
| PA1293 | 1 | 12 | -0.430247 | hypothetical protein | |
| PA1292 | 1 | 11 | -0.554233 | 3-mercaptopyruvate sulfurtransferase | |
| PA1291 | 2 | 9 | 0.057115 | hypothetical protein | |
| PA1290 | 2 | 12 | 0.016049 | transcriptional regulator | |
| PA1289 | 1 | 14 | 0.237517 | hypothetical protein | |
| PA1288 | 0 | 11 | 0.056887 | hypothetical protein | |
| PA1287 | -1 | 10 | 1.825130 | glutathione peroxidase | |
| PA1286 | -1 | 11 | 2.554338 | major facilitator superfamily transporter | |
| PA1285 | -1 | 9 | 2.408013 | transcriptional regulator | |
| PA1284 | -1 | 10 | 3.340582 | acyl-CoA dehydrogenase | |
| PA1283 | 1 | 13 | 4.663978 | transcriptional regulator | |
| PA1282 | 2 | 11 | 4.817121 | major facilitator superfamily transporter | |
| PA1281 | 3 | 12 | 5.209323 | adenosylcobinamide-GDP ribazoletransferase | |
| PA1280 | 2 | 11 | 5.380681 | hypothetical protein | |
| PA1279 | 3 | 11 | 5.447557 | nicotinate-nucleotide--dimethylbenzimidazole | |
| PA1278 | 1 | 9 | 4.990218 | bifunctional adenosylcobinamide | |
| PA1277 | 1 | 9 | 4.506822 | cobyric acid synthase | |
| PA1276 | -1 | 8 | 3.361384 | threonine-phosphate decarboxylase | |
| PA1275 | 0 | 8 | 3.615224 | cobalamin biosynthesis protein CobD | |
| PA1274 | -1 | 7 | 2.789687 | 5,6-dimethylbenzimidazole synthase | |
| PA1273 | -2 | 7 | 2.864534 | hydrogenobyrinate a,c-diamide synthase | |
| PA1272 | -2 | 8 | 2.995030 | cob(I)yrinic acid a,c-diamide | |
| PA1271 | -1 | 9 | 4.082427 | tonB-dependent receptor | |
| PA1270 | 2 | 7 | 5.429867 | hypothetical protein | |
| PA1269 | 1 | 11 | 5.524207 | transcriptional regulator | |
| PA1268 | 1 | 8 | 5.696737 | 4-hydroxyproline 2-epimerase | |
| PA1267 | 3 | 9 | 5.592494 | hypothetical protein | |
| PA1266 | 2 | 7 | 5.162387 | oxidoreductase | |
| PA1265 | 1 | 9 | 3.666613 | hypothetical protein | |
| PA1264 | -1 | 11 | 3.760421 | transcriptional regulator | |
| PA1263 | -1 | 12 | 3.101720 | hypothetical protein | |
| PA1262 | 0 | 13 | 3.047869 | major facilitator superfamily transporter | |
| PA1261 | 0 | 13 | 2.165530 | transcriptional regulator | |
| PA1260 | 1 | 16 | 2.297651 | amino acid ABC transporter substrate-binding | |
| PA1259 | 2 | 15 | 2.303320 | hypothetical protein | |
| PA1258 | 1 | 13 | 2.061286 | ABC transporter permease | |
| PA1257 | 2 | 9 | 2.338153 | amino acid ABC transporter permease | |
| PA1256 | 3 | 10 | 2.588815 | amino acid ABC transporter ATP binding protein | |
| PA1255 | 2 | 8 | 2.848904 | trans-3-hydroxy-L-proline dehydratase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1295 | SSPAMPROTEIN | 28 | 0.003 | Salmonella surface presentation of antigen gene typ... | |
>SSPAMPROTEIN#Salmonella surface presentation of antigen gene type | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1290 | HTHTETR | 76 | 2e-19 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1286 | TCRTETB | 45 | 4e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1283 | HTHTETR | 54 | 2e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1282 | TCRTETB | 194 | 1e-58 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1271 | PF00577 | 30 | 0.028 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1267 | NUCEPIMERASE | 29 | 0.020 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1262 | TCRTETB | 111 | 1e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 57 | PA1243 | PA1228 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1243 | -1 | 9 | 3.514480 | sensor/response regulator hybrid protein | |
| PA1242 | 0 | 8 | 4.512510 | hypothetical protein | |
| PA1241 | 1 | 10 | 4.120091 | transcriptional regulator | |
| PA1240 | 2 | 9 | 4.466159 | enoyl-CoA hydratase | |
| PA1239 | 1 | 10 | 4.252447 | hypothetical protein | |
| PA1238 | 1 | 10 | 4.070914 | multidrug efflux pump outer membrane protein | |
| PA1237 | 0 | 12 | 3.255598 | multidrug resistance efflux pump | |
| PA1236 | 0 | 14 | 2.541302 | major facilitator superfamily transporter | |
| PA1235 | 0 | 16 | 2.643991 | transcriptional regulator | |
| PA1234 | 0 | 13 | 2.564434 | hypothetical protein | |
| PA1233 | 0 | 12 | 2.907887 | hypothetical protein | |
| PA1232 | 1 | 13 | 3.255663 | hypothetical protein | |
| PA1231 | 0 | 12 | 3.029666 | hypothetical protein | |
| PA1230 | 0 | 12 | 3.056480 | hypothetical protein | |
| PA1229 | 1 | 10 | 2.866703 | transcriptional regulator | |
| PA1228 | 2 | 14 | 2.917325 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1243 | HTHFIS | 82 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1242 | SUBTILISIN | 88 | 3e-21 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1241 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1237 | RTXTOXIND | 122 | 5e-33 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1236 | TCRTETB | 109 | 7e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1235 | HTHFIS | 33 | 9e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1231 | RTXTOXIND | 66 | 4e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 58 | PA1084 | PA1076 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1084 | 3 | 13 | -1.829681 | flagellar basal body P-ring protein | |
| PA1083 | 3 | 13 | -2.687494 | flagellar basal body L-ring protein | |
| PA1082 | 3 | 13 | -3.140516 | flagellar basal body rod protein FlgG | |
| PA1081 | 1 | 12 | -3.391830 | flagellar basal body rod protein FlgF | |
| PA1080 | 1 | 12 | -3.379175 | flagellar hook protein FlgE | |
| PA1079 | 0 | 14 | -3.667849 | flagellar basal body rod modification protein | |
| PA1078 | 0 | 13 | -3.732849 | flagellar basal body rod protein FlgC | |
| PA1077 | 1 | 12 | -2.972483 | flagellar basal-body rod protein FlgB | |
| PA1076 | 2 | 12 | -2.699993 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1084 | FLGPRINGFLGI | 436 | e-155 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1083 | FLGLRINGFLGH | 180 | 3e-59 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1082 | FLGHOOKAP1 | 45 | 2e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1080 | FLGHOOKAP1 | 45 | 5e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1078 | FLGHOOKAP1 | 36 | 3e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 59 | PA1061 | PA1054 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1061 | 2 | 10 | 0.371769 | hypothetical protein | |
| PA1060 | 3 | 10 | 0.334044 | hypothetical protein | |
| PA1059 | 3 | 13 | -0.056775 | monovalent cation/H+ antiporter subunit G | |
| PA1058 | 3 | 12 | 0.205796 | monovalent cation/H+ antiporter subunit F | |
| PA1057 | 2 | 11 | 0.140893 | monovalent cation/H+ antiporter subunit E | |
| PA1056 | 2 | 11 | 1.435556 | monovalent cation/H+ antiporter subunit D | |
| PA1055 | 0 | 10 | 0.880215 | monovalent cation/H+ antiporter subunit C | |
| PA1054 | 2 | 11 | 1.320763 | monovalent cation/H+ antiporter subunit A |
| 60 | PA0999 | PA0938 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0999 | 1 | 23 | -3.685166 | 3-oxoacyl-ACP synthase | |
| PA0998 | 2 | 30 | -5.288557 | hypothetical protein | |
| PA0997 | 3 | 33 | -5.975727 | hypothetical protein | |
| PA0996 | 4 | 36 | -6.610518 | anthranilate--CoA ligase | |
| PA0995 | 5 | 38 | -8.257211 | methylated-DNA--protein-cysteine | |
| PA0994 | 4 | 37 | -8.148888 | usher CupC3 | |
| PA0993 | 2 | 39 | -8.002229 | chaperone CupC2 | |
| PA0992 | 2 | 32 | -6.765278 | fimbrial subunit CupC1 | |
| PA0990 | 4 | 48 | -11.394204 | hypothetical protein | |
| PA0989 | 7 | 54 | -13.550331 | hypothetical protein | |
| PA0988 | 9 | 59 | -14.368692 | hypothetical protein | |
| PA0987 | 8 | 58 | -14.050572 | hypothetical protein | |
| PA0986 | 8 | 74 | -17.479703 | hypothetical protein | |
| PA0985 | 8 | 73 | -17.016547 | pyocin S5 | |
| PA0984 | 5 | 56 | -11.805241 | colicin immunity protein | |
| PA0983 | 2 | 45 | -8.707761 | hypothetical protein | |
| PA0982 | 1 | 41 | -7.922864 | hypothetical protein | |
| PA0981 | 2 | 38 | -7.219771 | hypothetical protein | |
| PA0979 | 1 | 25 | -4.601720 | hypothetical protein | |
| PA0978 | 0 | 20 | -4.384315 | hypothetical protein | |
| PA0976 | 1 | 21 | -4.590070 | *7-cyano-7-deazaguanine synthase | |
| PA0975 | 2 | 21 | -5.131640 | radical activating enzyme | |
| PA0974 | 1 | 21 | -4.832310 | hypothetical protein | |
| PA0973 | 1 | 21 | -5.270237 | peptidoglycan associated lipoprotein OprL | |
| PA0972 | 1 | 20 | -4.941468 | translocation protein TolB | |
| PA0971 | 2 | 23 | -5.194336 | translocation protein TolA | |
| PA0970 | 2 | 24 | -4.543055 | translocation protein TolR | |
| PA0969 | 1 | 22 | -4.214492 | translocation protein TolQ | |
| PA0968 | 2 | 17 | -3.822335 | hypothetical protein | |
| PA0967 | 1 | 15 | -3.671872 | Holliday junction ATP-dependent DNA helicase | |
| PA0966 | 1 | 14 | -3.484782 | Holliday junction ATP-dependent DNA helicase | |
| PA0965 | 1 | 13 | -3.343513 | crossover junction endodeoxyribonuclease RuvC | |
| PA0964 | 0 | 13 | -3.366052 | transcriptional regulator PmpR | |
| PA0963 | -1 | 13 | -3.806443 | aspartate--tRNA ligase | |
| PA0962 | 0 | 19 | -4.280600 | DNA-binding stress protein | |
| PA0961 | -1 | 14 | -3.889531 | cold-shock protein | |
| PA0960 | -2 | 13 | -3.839468 | hypothetical protein | |
| PA0959 | -1 | 13 | -3.553487 | hypothetical protein | |
| PA0958 | -1 | 13 | -3.651593 | porin D | |
| PA0957 | 0 | 16 | -3.009211 | hypothetical protein | |
| PA0956 | -1 | 14 | -2.999041 | proline--tRNA ligase | |
| PA0955 | -1 | 25 | -3.342883 | hypothetical protein | |
| PA0954 | 2 | 29 | -3.487967 | acylphosphatase | |
| PA0953 | 1 | 25 | -3.127114 | thioredoxin | |
| PA0952 | 2 | 21 | -2.723814 | hypothetical protein | |
| PA0951a | 2 | 20 | -3.147663 | hypothetical protein | |
| PA0951 | 1 | 20 | -2.190151 | hypothetical protein | |
| PA0950 | 0 | 16 | -1.351070 | arsenate reductase | |
| PA0949 | 0 | 16 | -1.468739 | NAD(P)H dehydrogenase | |
| PA0948 | -1 | 15 | -2.462543 | hypothetical protein | |
| PA0947 | -1 | 17 | -2.782772 | DNA replication initiation factor | |
| PA0946 | 0 | 17 | -2.567955 | hypothetical protein | |
| PA0945 | -2 | 17 | -3.690831 | phosphoribosylformylglycinamidine cyclo-ligase | |
| PA0944 | -1 | 24 | -4.687336 | phosphoribosylglycinamide formyltransferase | |
| PA0943 | 1 | 23 | -5.309334 | hypothetical protein | |
| PA0942 | 2 | 27 | -5.294916 | transcriptional regulator | |
| PA0941 | 3 | 20 | -5.428295 | hypothetical protein | |
| PA0940 | 4 | 19 | -4.658629 | hypothetical protein | |
| PA0939 | 1 | 15 | -3.902850 | hypothetical protein | |
| PA0938 | 1 | 17 | -3.183860 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0999 | PF04183 | 30 | 0.016 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0994 | PF00577 | 788 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0985 | CHANLCOLICIN | 165 | 2e-47 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0974 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0973 | OMPADOMAIN | 116 | 6e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0971 | IGASERPTASE | 49 | 2e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0969 | 60KDINNERMP | 29 | 0.017 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0963 | ANTHRAXTOXNA | 32 | 0.009 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0962 | HELNAPAPROT | 157 | 3e-52 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0956 | ANTHRAXTOXNA | 30 | 0.031 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 61 | PA0830 | PA0805 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0830 | 0 | 12 | -3.015659 | hypothetical protein | |
| PA0829 | 1 | 15 | -2.964620 | hydrolase | |
| PA0828 | 2 | 20 | -3.679521 | transcriptional regulator | |
| PA0827 | 3 | 29 | -6.387270 | hypothetical protein | |
| PA0826 | 3 | 43 | -8.891205 | hypothetical protein | |
| PA0825 | 2 | 43 | -7.277434 | hypothetical protein | |
| PA0824 | 3 | 41 | -6.510106 | hypothetical protein | |
| PA0823 | 5 | 35 | -6.657106 | hypothetical protein | |
| PA0821 | 1 | 28 | -4.351435 | hypothetical protein | |
| PA0820 | 1 | 18 | -1.202307 | hypothetical protein | |
| PA0819 | 2 | 15 | 2.755566 | hypothetical protein | |
| PA0818 | 2 | 14 | 3.822773 | hypothetical protein | |
| PA0817 | 2 | 12 | 3.134187 | ring-cleaving dioxygenase | |
| PA0816 | 2 | 11 | 3.434507 | transcriptional regulator | |
| PA0815 | 2 | 10 | 3.182595 | transcriptional regulator | |
| PA0814 | 4 | 10 | 3.465530 | hypothetical protein | |
| PA0813 | 2 | 8 | 2.725000 | hypothetical protein | |
| PA0812 | 1 | 9 | 1.871033 | hypothetical protein | |
| PA0811 | 1 | 11 | 2.385616 | major facilitator superfamily transporter | |
| PA0810 | -1 | 9 | 0.978180 | haloacid dehalogenase | |
| PA0809 | -1 | 10 | 0.659563 | divalent metal cation transporter MntH | |
| PA0808 | -1 | 13 | -0.616838 | hypothetical protein | |
| PA0807 | -1 | 12 | -0.019045 | protein AmpDh3 | |
| PA0806 | 2 | 11 | 1.065125 | hypothetical protein | |
| PA0805 | 2 | 12 | 1.087226 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0828 | HTHTETR | 52 | 2e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0811 | TCRTETA | 34 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 62 | PA0743 | PA0715 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0743 | 2 | 12 | 1.803370 | NAD-dependent L-serine dehydrogenase | |
| PA0742 | 4 | 11 | 1.395858 | hypothetical protein | |
| PA0741 | 2 | 11 | 1.549042 | hypothetical protein | |
| PA0740 | 3 | 10 | 0.830314 | SDS hydrolase SdsA1 | |
| PA0739 | 3 | 12 | 0.974413 | transcriptional regulator | |
| PA0738 | 3 | 12 | 0.134358 | hypothetical protein | |
| PA0737 | 1 | 13 | 0.169082 | hypothetical protein | |
| PA0736a | -1 | 13 | -0.170608 | hypothetical protein | |
| PA0736 | 0 | 13 | -0.144248 | hypothetical protein | |
| PA0735 | 0 | 14 | -0.891956 | hypothetical protein | |
| PA0734 | 1 | 16 | -2.614533 | hypothetical protein | |
| PA0733 | 1 | 17 | -3.886029 | 16S rRNA pseudouridine(516) synthase | |
| PA0732 | 0 | 21 | -5.197099 | hypothetical protein | |
| PA0731 | -1 | 26 | -5.470052 | hypothetical protein | |
| PA0730 | -1 | 26 | -6.070397 | (R)-3-hydroxydecanoyl-ACP:CoA transacylase | |
| PA0729 | 1 | 31 | -5.796972 | *hypothetical protein | |
| PA0728 | 1 | 29 | -5.100697 | bacteriophage integrase | |
| PA0727 | 2 | 28 | -4.711650 | hypothetical protein | |
| PA0726 | 3 | 30 | -3.670429 | hypothetical protein | |
| PA0725 | 4 | 23 | -3.584509 | hypothetical protein | |
| PA0724 | 6 | 30 | -2.960911 | phage coat protein A | |
| PA0723 | 5 | 33 | -2.314679 | phage coat protein B | |
| PA0722 | 12 | 68 | -14.182695 | hypothetical protein | |
| PA0721 | 12 | 81 | -18.621185 | hypothetical protein | |
| PA0720 | 12 | 76 | -17.310948 | helix destabilizing protein of bacteriophage | |
| PA0719 | 11 | 81 | -18.136060 | hypothetical protein | |
| PA0718 | 10 | 78 | -18.890334 | hypothetical protein | |
| PA0716 | 10 | 74 | -17.823382 | hypothetical protein | |
| PA0715 | 7 | 47 | -10.734761 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0741 | NUCEPIMERASE | 35 | 1e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0724 | cloacin | 43 | 2e-06 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 63 | PA0656 | PA0611 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0656 | 2 | 9 | -3.472457 | HIT family protein | |
| PA0655 | 3 | 7 | -3.149301 | 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol | |
| PA0654 | 3 | 8 | -3.496348 | S-adenosylmethionine decarboxylase | |
| PA0653 | 1 | 11 | -3.257989 | hypothetical protein | |
| PA0652 | 1 | 14 | -4.002073 | cAMP-regulatory protein | |
| PA0651 | 1 | 25 | -4.925276 | indole-3-glycerol phosphate synthase | |
| PA0650 | 2 | 29 | -6.102127 | anthranilate phosphoribosyltransferase | |
| PA0649 | 4 | 40 | -8.568711 | anthranilate synthase component II | |
| PA0648 | 7 | 49 | -9.638724 | hypothetical protein | |
| PA0647 | 4 | 27 | -4.666980 | hypothetical protein | |
| PA0646 | 4 | 25 | -4.269665 | hypothetical protein | |
| PA0645 | 3 | 20 | -2.775403 | hypothetical protein | |
| PA0644 | 3 | 18 | -2.260406 | hypothetical protein | |
| PA0643 | 2 | 17 | -1.725130 | hypothetical protein | |
| PA0641 | -1 | 15 | -0.870535 | bacteriophage protein | |
| PA0640 | -1 | 16 | -0.844320 | bacteriophage protein | |
| PA0639 | -2 | 16 | -0.724406 | hypothetical protein | |
| PA0638 | -1 | 16 | -1.672284 | bacteriophage protein | |
| PA0637 | 0 | 19 | -1.875532 | hypothetical protein | |
| PA0636 | 1 | 21 | -1.192236 | hypothetical protein | |
| PA0635 | 3 | 23 | 0.192140 | hypothetical protein | |
| PA0634 | 1 | 21 | -0.391725 | hypothetical protein | |
| PA0633 | 1 | 23 | -0.319107 | hypothetical protein | |
| PA0631 | 2 | 24 | 0.293895 | hypothetical protein | |
| PA0630 | 1 | 26 | -0.149443 | hypothetical protein | |
| PA0629 | 1 | 25 | -0.470073 | hypothetical protein | |
| PA0628 | 0 | 25 | -1.167690 | hypothetical protein | |
| PA0627 | -1 | 22 | -1.371133 | hypothetical protein | |
| PA0626 | -1 | 25 | -2.101905 | hypothetical protein | |
| PA0625 | 0 | 34 | -3.894574 | hypothetical protein | |
| PA0624 | 1 | 32 | -5.174963 | hypothetical protein | |
| PA0623 | 0 | 32 | -5.006966 | bacteriophage protein | |
| PA0622 | 1 | 34 | -4.859984 | bacteriophage protein | |
| PA0621 | 1 | 38 | -4.784747 | hypothetical protein | |
| PA0620 | 0 | 35 | -3.693737 | bacteriophage protein | |
| PA0619 | -2 | 25 | -0.550107 | bacteriophage protein | |
| PA0618 | -1 | 24 | -0.585807 | bacteriophage protein | |
| PA0617 | -1 | 22 | 0.588942 | bacteriophage protein | |
| PA0616 | 0 | 16 | 0.351335 | hypothetical protein | |
| PA0615 | -1 | 16 | -0.259380 | hypothetical protein | |
| PA0614 | 0 | 12 | -1.299963 | hypothetical protein | |
| PA0613 | 0 | 10 | -1.756428 | hypothetical protein | |
| PA0612 | 2 | 10 | -1.803555 | repressor PtrB | |
| PA0611 | 2 | 12 | -2.104543 | HTH-type transcriptional regulator PrtR |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0641 | CHANLCOLICIN | 30 | 0.046 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0630 | PYOCINKILLER | 32 | 5e-04 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0625 | PF07132 | 32 | 0.011 | Harpin protein (HrpN) | |
>PF07132#Harpin protein (HrpN) | |||||
| 64 | PA0596 | PA0567 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0596 | -1 | 13 | -3.009662 | hypothetical protein | |
| PA0595 | -2 | 13 | -2.913244 | organic solvent tolerance protein OstA | |
| PA0594 | -1 | 12 | -0.102154 | chaperone SurA | |
| PA0593 | 0 | 11 | -2.192579 | 4-hydroxythreonine-4-phosphate dehydrogenase | |
| PA0592 | 0 | 12 | -3.344605 | ribosomal RNA small subunit methyltransferase A | |
| PA0591 | 0 | 12 | -4.131123 | protein ApaG | |
| PA0590 | 0 | 12 | -3.920146 | bis(5'-nucleosyl)-tetraphosphatase | |
| PA0589 | 1 | 12 | -3.450010 | thiosulfate sulfurtransferase | |
| PA0588 | 0 | 10 | -3.446908 | hypothetical protein | |
| PA0587 | 0 | 8 | -1.971703 | hypothetical protein | |
| PA0586 | 0 | 8 | -1.014101 | hypothetical protein | |
| PA0585 | 0 | 10 | 1.259168 | hypothetical protein | |
| PA0584 | 1 | 11 | 0.703287 | multifunctional tRNA nucleotidyl | |
| PA0583 | 0 | 12 | 0.302388 | hypothetical protein | |
| PA0582 | 1 | 9 | -0.337190 | dihydroneopterin aldolase | |
| PA0581 | 2 | 10 | -1.569021 | glycerol-3-phosphate acyltransferase PlsY | |
| PA0580 | 0 | 11 | -1.415825 | tRNA N6-adenosine threonylcarbamoyltransferase | |
| PA0579 | 0 | 13 | -2.270335 | 30S ribosomal protein S21 | |
| PA0578 | 0 | 12 | -2.300481 | hypothetical protein | |
| PA0577 | -2 | 10 | -1.868370 | DNA primase | |
| PA0576 | -2 | 10 | -1.667501 | RNA polymerase sigma factor RpoD | |
| PA0575 | 0 | 12 | -0.970470 | hypothetical protein | |
| PA0574 | 2 | 13 | -1.053973 | *hypothetical protein | |
| PA0573 | 0 | 10 | 0.010899 | hypothetical protein | |
| PA0572 | 0 | 9 | 0.319456 | hypothetical protein | |
| PA0571 | -1 | 13 | 1.380158 | hypothetical protein | |
| PA0570 | 1 | 13 | 0.645379 | hypothetical protein | |
| PA0569 | 1 | 13 | 1.156657 | hypothetical protein | |
| PA0568 | 1 | 13 | 0.058644 | hypothetical protein | |
| PA0567 | 2 | 15 | 1.169205 | hypothetical protein |
| 65 | PA0502 | PA0489 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0502 | -1 | 13 | -3.541633 | biotin biosynthesis protein BioH | |
| PA0501 | 0 | 15 | -3.444501 | 8-amino-7-oxononanoate synthase | |
| PA0500 | 1 | 18 | -4.735625 | biotin synthase | |
| PA0499 | 1 | 20 | -3.364884 | pili assembly chaperone | |
| PA0498 | 1 | 19 | -3.219750 | hypothetical protein | |
| PA0497 | 1 | 14 | -0.946667 | hypothetical protein | |
| PA0496 | 2 | 10 | 1.348878 | hypothetical protein | |
| PA0495 | 3 | 9 | 0.937977 | hypothetical protein | |
| PA0494 | 2 | 8 | 2.465754 | acetyl-CoA carboxylase biotin carboxylase | |
| PA0493 | 1 | 11 | 2.319301 | acetyl-CoA carboxylase biotin carboxyl carrier | |
| PA0492 | 0 | 12 | 2.390027 | hypothetical protein | |
| PA0491 | -1 | 11 | 2.259624 | transcriptional regulator | |
| PA0490 | 3 | 11 | 1.953093 | hypothetical protein | |
| PA0489 | 2 | 11 | 2.109950 | phosphoribosyl transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0493 | RTXTOXIND | 31 | 3e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0489 | ACRIFLAVINRP | 29 | 0.019 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 66 | PA0475 | PA0467 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0475 | 2 | 11 | 0.346554 | transcriptional regulator | |
| PA0474 | 1 | 11 | 0.136739 | esterase | |
| PA0473 | 2 | 10 | 0.857956 | glutathione S-transferase | |
| PA0472 | 2 | 11 | 1.217160 | RNA polymerase sigma factor | |
| PA0471 | 1 | 11 | 1.032098 | transmembrane sensor | |
| PA0470 | 3 | 9 | 0.418551 | ferrichrome receptor FiuA | |
| PA0469 | 1 | 9 | 2.121113 | hypothetical protein | |
| PA0468 | 2 | 11 | 2.352651 | hypothetical protein | |
| PA0467 | 2 | 11 | 1.222490 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0475 | HTHTETR | 47 | 7e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 67 | PA0279 | PA0273 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0279 | 3 | 10 | 3.286387 | transcriptional regulator | |
| PA0278 | 4 | 10 | 3.425060 | hypothetical protein | |
| PA0277 | 4 | 11 | 2.727553 | hypothetical protein | |
| PA0276 | 5 | 12 | 2.778528 | hypothetical protein | |
| PA0275 | 6 | 11 | 2.628003 | transcriptional regulator | |
| PA0274 | 5 | 13 | 2.473962 | hypothetical protein | |
| PA0273 | 2 | 12 | 2.808169 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0273 | TCRTETB | 29 | 0.042 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 68 | PA0217 | PA0211 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0217 | 0 | 12 | 3.481879 | transcriptional regulator | |
| PA0216 | 0 | 12 | 4.525550 | malonate transporter MadM | |
| PA0215 | 0 | 12 | 5.333088 | malonate transporter MadL | |
| PA0214 | 2 | 11 | 6.141943 | acyl transferase | |
| PA0213 | 3 | 10 | 4.596395 | phosphoribosyl-dephospho-CoA transferase | |
| PA0212 | 1 | 10 | 4.185795 | malonate decarboxylase subunit gamma | |
| PA0211 | 1 | 10 | 3.131146 | malonate decarboxylase subunit beta |
| 69 | PA0117 | PA0106 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0117 | 2 | 11 | 1.099413 | short-chain dehydrogenase | |
| PA0116 | 4 | 12 | 1.157089 | hypothetical protein | |
| PA0115 | 5 | 10 | 1.981798 | hypothetical protein | |
| PA0114 | 5 | 10 | 1.934377 | cytochrome c oxidase assembly protein SenC | |
| PA0113 | 4 | 12 | 1.483651 | protoheme IX farnesyltransferase | |
| PA0112 | 2 | 12 | 1.388589 | hypothetical protein | |
| PA0111 | 2 | 15 | -0.986837 | hypothetical protein | |
| PA0110 | 3 | 14 | -1.766586 | hypothetical protein | |
| PA0109 | 4 | 15 | -2.644690 | hypothetical protein | |
| PA0108 | 3 | 11 | -1.210910 | cytochrome C oxidase subunit III | |
| PA0107 | 4 | 10 | -0.955765 | cytochrome C oxidase assembly protein | |
| PA0106 | 3 | 10 | 0.263967 | cytochrome C oxidase subunit I |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0117 | DHBDHDRGNASE | 73 | 2e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0115 | SACTRNSFRASE | 29 | 0.006 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0114 | PF06057 | 28 | 0.026 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| 70 | PA0083 | PA0058 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0083 | -1 | 10 | 3.270276 | hypothetical protein | |
| PA0082 | -1 | 13 | 3.372991 | hypothetical protein | |
| PA0081 | 0 | 15 | 3.519804 | Fha domain-containing protein | |
| PA0080 | 0 | 15 | 3.363020 | hypothetical protein | |
| PA0079 | -1 | 15 | 3.358618 | hypothetical protein | |
| PA0078 | 0 | 15 | 3.668814 | hypothetical protein | |
| PA0077 | 0 | 14 | 3.815056 | type VI secretion protein IcmF | |
| PA0076 | 0 | 11 | 3.392109 | hypothetical protein | |
| PA0075 | 1 | 11 | 3.009088 | serine/threonine phosphatase | |
| PA0074 | 0 | 9 | 2.922439 | serine/threonine protein kinase PpkA | |
| PA0073 | 2 | 8 | 2.468673 | ABC transporter ATP-binding protein | |
| PA0072 | 1 | 9 | 1.536245 | hypothetical protein | |
| PA0071 | 0 | 9 | 0.487800 | hypothetical protein | |
| PA0070 | -1 | 13 | 0.764405 | hypothetical protein | |
| PA0069 | 0 | 12 | 1.071817 | hypothetical protein | |
| PA0068 | 0 | 10 | 1.247664 | hypothetical protein | |
| PA0067 | 1 | 10 | 1.360930 | oligopeptidase A | |
| PA0066 | 2 | 11 | 1.881688 | hypothetical protein | |
| PA0065 | 2 | 11 | 1.683225 | 5'-nucleotidase | |
| PA0064 | 2 | 11 | 1.561860 | hypothetical protein | |
| PA0063 | 2 | 11 | 2.027280 | hypothetical protein | |
| PA0062 | 0 | 15 | 1.486779 | hypothetical protein | |
| PA0061 | -1 | 14 | 2.531317 | hypothetical protein | |
| PA0060 | -1 | 12 | 1.909274 | hypothetical protein | |
| PA0059 | -1 | 12 | 2.615817 | osmotically inducible protein OsmC | |
| PA0058 | -2 | 13 | 3.061886 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0081 | PF05616 | 42 | 4e-06 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0078 | OMPADOMAIN | 74 | 1e-16 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0074 | PF03544 | 38 | 7e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 71 | PA5531 | PA5524 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5531 | 1 | 10 | -2.537519 | transporter TonB | |
| PA5530 | 1 | 10 | -2.819871 | MFS dicarboxylate transporter | |
| PA5529 | 1 | 11 | -1.541190 | sodium/proton antiporter | |
| PA5528 | -1 | 12 | 0.017095 | hypothetical protein | |
| PA5527 | -2 | 12 | 0.169435 | hypothetical protein | |
| PA5526 | -2 | 12 | 0.162714 | hypothetical protein | |
| PA5525 | -1 | 11 | 0.711416 | transcriptional regulator | |
| PA5524 | 0 | 10 | 0.049212 | short-chain dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5531 | TONBPROTEIN | 114 | 4e-32 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5530 | TCRTETA | 35 | 6e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5529 | RTXTOXINA | 32 | 0.008 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5524 | DHBDHDRGNASE | 104 | 5e-29 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 72 | PA5487 | PA5476 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5487 | -1 | 10 | 0.273331 | hypothetical protein | |
| PA5486 | -2 | 10 | -0.644583 | hypothetical protein | |
| PA5485 | -1 | 9 | -1.763861 | protein AmpDh2 | |
| PA5484 | -1 | 9 | -1.499581 | two-component sensor | |
| PA5483 | -1 | 9 | -1.777938 | two-component response regulator AlgB | |
| PA5482 | -1 | 9 | -1.936703 | hypothetical protein | |
| PA5481 | -1 | 10 | -1.653558 | hypothetical protein | |
| PA5479 | -1 | 10 | -0.811063 | glutamate/aspartate:proton symporter | |
| PA5478 | -1 | 8 | 0.118314 | hypothetical protein | |
| PA5477 | -2 | 8 | 0.039168 | hypothetical protein | |
| PA5476 | -2 | 7 | 0.407600 | citrate transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5487 | FLGHOOKFLIK | 34 | 0.001 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5484 | PF06580 | 53 | 1e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5483 | HTHFIS | 448 | e-157 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5479 | V8PROTEASE | 32 | 0.007 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5476 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 73 | PA5365 | PA5360 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5365 | -1 | 11 | -0.726491 | phosphate uptake regulatory protein PhoU | |
| PA5364 | -1 | 11 | -0.506789 | two-component response regulator | |
| PA5363 | 0 | 13 | -0.328574 | hypothetical protein | |
| PA5362 | 1 | 12 | -0.184065 | hypothetical protein | |
| PA5361 | 0 | 11 | 0.669300 | two-component sensor PhoR | |
| PA5360 | -2 | 9 | 0.856754 | two-component response regulator PhoB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5365 | FLGHOOKAP1 | 28 | 0.033 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5364 | HTHFIS | 91 | 8e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5361 | PF06580 | 38 | 6e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5360 | HTHFIS | 100 | 2e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 74 | PA5333 | PA5322 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5333 | 0 | 13 | -2.111285 | hypothetical protein | |
| PA5332 | -2 | 12 | -1.459645 | catabolite repression control protein | |
| PA5331 | -2 | 11 | -0.295578 | orotate phosphoribosyltransferase | |
| PA5330 | -1 | 10 | -0.791299 | hypothetical protein | |
| PA5329 | -1 | 9 | -0.895280 | hypothetical protein | |
| PA5328 | 0 | 9 | -1.018373 | mono-heme cytochrome C | |
| PA5327 | -1 | 7 | -0.674806 | oxidoreductase | |
| PA5326 | -1 | 8 | -0.461224 | hypothetical protein | |
| PA5325 | 0 | 11 | -0.239001 | hypothetical protein | |
| PA5324 | -1 | 8 | 0.363107 | transcriptional regulator | |
| PA5323 | -2 | 9 | 0.698128 | acetylglutamate kinase | |
| PA5322 | -1 | 10 | 0.697942 | phosphomannomutase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5333 | ACRIFLAVINRP | 28 | 0.009 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5331 | PF00577 | 28 | 0.041 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5330 | RTXTOXIND | 30 | 0.008 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5326 | ALARACEMASE | 29 | 0.041 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5324 | HTHFIS | 29 | 0.029 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5323 | CARBMTKINASE | 55 | 8e-11 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5322 | PF03544 | 30 | 0.039 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 75 | PA5232 | PA5226 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5232 | 0 | 8 | -0.078648 | hypothetical protein | |
| PA5231 | 1 | 8 | -0.542823 | ABC transporter ATP-binding protein/permease | |
| PA5230 | 2 | 12 | -0.873844 | ABC transporter permease | |
| PA5229 | 2 | 13 | -0.238165 | hypothetical protein | |
| PA5228 | 0 | 10 | 0.925000 | 5-formyltetrahydrofolate cyclo-ligase | |
| PA5227 | 0 | 11 | 0.514583 | hypothetical protein | |
| PA5226 | -1 | 10 | 1.555024 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5232 | RTXTOXIND | 81 | 6e-19 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5231 | PF05272 | 32 | 0.013 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5230 | ABC2TRNSPORT | 44 | 4e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5226 | ALARACEMASE | 26 | 0.048 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 76 | PA5166 | PA5158 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5166 | -2 | 11 | 0.220540 | two-component response regulator | |
| PA5165 | -2 | 12 | -0.193362 | two-component sensor | |
| PA5164 | -2 | 14 | -0.619913 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
| PA5163 | -2 | 14 | 0.419573 | glucose-1-phosphate thymidylyltransferase | |
| PA5162 | -2 | 13 | 0.611556 | dTDP-4-dehydrorhamnose reductase | |
| PA5161 | -2 | 13 | 0.691704 | dTDP-D-glucose 4,6-dehydratase | |
| PA5160 | -1 | 12 | 1.015787 | *drug efflux transporter | |
| PA5159 | -1 | 12 | 1.216830 | multidrug resistance protein | |
| PA5158 | 0 | 11 | 0.715591 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5166 | HTHFIS | 446 | e-156 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5162 | NUCEPIMERASE | 48 | 2e-08 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5161 | NUCEPIMERASE | 176 | 9e-55 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5160 | TCRTETB | 109 | 6e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5159 | RTXTOXIND | 77 | 2e-17 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5158 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 77 | PA5044 | PA5037 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA5044 | 2 | 11 | -3.941056 | type 4 fimbrial biogenesis protein PilM | |
| PA5043 | 1 | 11 | -3.824147 | type 4 fimbrial biogenesis protein PilN | |
| PA5042 | -1 | 12 | -2.481094 | type 4 fimbrial biogenesis protein PilO | |
| PA5041 | -1 | 9 | -1.864266 | type 4 fimbrial biogenesis protein PilP | |
| PA5040 | 0 | 9 | -1.762549 | type 4 fimbrial biogenesis outer membrane | |
| PA5039 | 0 | 10 | -1.085287 | shikimate kinase | |
| PA5038 | -1 | 10 | -1.059521 | 3-dehydroquinate synthase | |
| PA5037 | -2 | 10 | -0.535910 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5044 | SHAPEPROTEIN | 32 | 0.002 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5040 | BCTERIALGSPD | 313 | 3e-99 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5039 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA5037 | PF03544 | 43 | 1e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 78 | PA4868 | PA4862 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4868 | 3 | 19 | 2.638271 | urease subunit alpha | |
| PA4867 | 0 | 17 | 3.193355 | urease subunit beta | |
| PA4866 | -1 | 16 | 2.667461 | hypothetical protein | |
| PA4865 | -1 | 16 | 2.650753 | urease subunit gamma | |
| PA4864 | -1 | 15 | 2.715779 | urease accessory protein | |
| PA4863 | -1 | 13 | 0.637807 | hypothetical protein | |
| PA4862 | -1 | 12 | 0.414564 | ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4868 | UREASE | 1096 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4866 | SACTRNSFRASE | 42 | 2e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4863 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4862 | PF05272 | 28 | 0.046 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 79 | PA4781 | PA4776 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4781 | 0 | 9 | 1.522335 | cyclic di-GMP phosphodiesterase | |
| PA4780 | 1 | 11 | 1.686601 | hypothetical protein | |
| PA4779 | 2 | 11 | 1.660320 | hypothetical protein | |
| PA4778 | 3 | 11 | 1.432110 | protein CueR | |
| PA4777 | 2 | 12 | 1.781550 | two-component regulator system signal sensor | |
| PA4776 | 1 | 11 | 2.002811 | two-component regulator system response |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4781 | HTHFIS | 74 | 2e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4780 | IGASERPTASE | 31 | 0.008 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4778 | PF07675 | 30 | 0.002 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4777 | PF06580 | 34 | 0.002 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4776 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 80 | PA4600 | PA4589 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4600 | -2 | 10 | -0.182542 | transcriptional regulator NfxB | |
| PA4599 | -2 | 10 | 0.242961 | resistance-nodulation-cell division (RND) | |
| PA4598 | -1 | 9 | 0.055169 | resistance-nodulation-cell division (RND) | |
| PA4597 | 0 | 8 | 0.713231 | multidrug efflux outer membrane protein OprJ | |
| PA4596 | -1 | 8 | 0.609900 | transcriptional regulator | |
| PA4595 | -1 | 8 | 0.276267 | ABC transporter ATP-binding protein | |
| PA4594 | -2 | 11 | 0.384964 | ABC transporter ATP-binding protein | |
| PA4593 | -1 | 10 | 0.026822 | ABC transporter permease | |
| PA4592 | -2 | 8 | -0.560226 | hypothetical protein | |
| PA4591 | -1 | 9 | -0.336872 | hypothetical protein | |
| PA4590 | -2 | 9 | -0.012306 | protein activator | |
| PA4589 | -2 | 10 | 0.028701 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4600 | HTHTETR | 38 | 8e-06 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4599 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4598 | ACRIFLAVINRP | 1169 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4596 | HTHTETR | 35 | 8e-05 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4593 | PF05844 | 29 | 0.035 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4591 | RTXTOXIND | 58 | 4e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4589 | OMADHESIN | 30 | 0.021 | Yersinia outer membrane adhesin signature. | |
>OMADHESIN#Yersinia outer membrane adhesin signature. | |||||
| 81 | PA4558 | PA4534 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4558 | 1 | 11 | -3.985954 | FkbP-type peptidyl-prolyl cis-trans isomerase | |
| PA4557 | 2 | 12 | -4.130585 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |
| PA4556 | 1 | 12 | -4.276515 | type 4 fimbrial biogenesis protein PilE | |
| PA4555 | 0 | 13 | -4.354654 | type 4 fimbrial biogenesis protein PilY2 | |
| PA4554 | 0 | 13 | -4.227030 | type 4 fimbrial biogenesis protein PilY1 | |
| PA4553 | 0 | 16 | -2.595296 | type 4 fimbrial biogenesis protein PilX | |
| PA4552 | 0 | 12 | -1.813231 | type 4 fimbrial biogenesis protein PilW | |
| PA4551 | 0 | 11 | -1.363845 | type 4 fimbrial biogenesis protein PilV | |
| PA4550 | 0 | 10 | -1.329337 | type 4 fimbrial biogenesis protein FimU | |
| PA4549 | 0 | 9 | -0.887469 | type 4 fimbrial biogenesis protein FimT | |
| PA4548 | -1 | 8 | -0.058989 | D-amino acid oxidase | |
| PA4547 | 0 | 8 | -0.793360 | two-component response regulator PilR | |
| PA4546 | -1 | 11 | -1.180825 | two-component sensor PilS | |
| PA4545 | -2 | 12 | -1.061708 | competence protein ComL | |
| PA4544 | -2 | 13 | -1.129514 | pseudouridine synthase | |
| PA4543 | -2 | 12 | -1.101810 | hypothetical protein | |
| PA4542 | -2 | 13 | -1.495530 | chaperone protein ClpB | |
| PA4541 | 0 | 18 | -1.218273 | ***hypothetical protein | |
| PA4540 | -1 | 15 | -0.980588 | hypothetical protein | |
| PA4539 | -1 | 16 | -1.004086 | hypothetical protein | |
| PA4538 | -3 | 13 | -0.402196 | NADH dehydrogenase | |
| PA4537 | 0 | 15 | -0.629946 | hypothetical protein | |
| PA4536 | 0 | 17 | -0.836586 | hypothetical protein | |
| PA4535 | 1 | 18 | -1.211985 | hypothetical protein | |
| PA4534 | 0 | 16 | -0.757201 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4558 | INFPOTNTIATR | 34 | 1e-04 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4557 | PF06704 | 28 | 0.033 | DspF/AvrF protein | |
>PF06704#DspF/AvrF protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4556 | BCTERIALGSPG | 42 | 1e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4551 | PilS_PF08805 | 30 | 0.003 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4550 | BCTERIALGSPG | 41 | 5e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4549 | BCTERIALGSPG | 33 | 2e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4547 | HTHFIS | 525 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4542 | HTHFIS | 43 | 4e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4541 | PF05860 | 65 | 1e-14 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4540 | PF00577 | 37 | 2e-04 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4536 | 2FE2SRDCTASE | 27 | 0.041 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4534 | SACTRNSFRASE | 28 | 0.013 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 82 | PA4529 | PA4524 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4529 | -1 | 13 | -3.663605 | dephospho-CoA kinase | |
| PA4528 | -1 | 14 | -4.058296 | type 4 prepilin peptidase PilD | |
| PA4526 | -1 | 15 | -3.537049 | type 4 fimbrial biogenesis protein PilB | |
| PA4525 | -3 | 14 | -2.079031 | type 4 fimbrial protein PilA | |
| PA4524 | -1 | 8 | -1.736565 | *nicotinate-nucleotide pyrophosphorylase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4529 | DHBDHDRGNASE | 30 | 0.005 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4528 | PREPILNPTASE | 353 | e-125 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4525 | BCTERIALGSPG | 50 | 1e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4524 | RTXTOXIND | 29 | 0.020 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 83 | PA4446 | PA4440 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4446 | 0 | 10 | -1.822335 | AlgW protein | |
| PA4445 | 0 | 10 | -2.016779 | hypothetical protein | |
| PA4444 | -2 | 9 | -1.607464 | murein hydrolase B | |
| PA4443 | -1 | 10 | -1.877233 | sulfate adenylyltransferase subunit 2 | |
| PA4442 | -2 | 10 | -1.319202 | bifunctional sulfate adenylyltransferase subunit | |
| PA4441 | 0 | 9 | -1.213639 | hypothetical protein | |
| PA4440 | -1 | 8 | -1.853908 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4446 | V8PROTEASE | 61 | 2e-12 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4443 | TCRTETOQM | 28 | 0.046 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4442 | TCRTETOQM | 68 | 5e-14 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4440 | FLAGELLIN | 31 | 0.004 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 84 | PA4310 | PA4296 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4310 | -1 | 9 | -1.031105 | chemotactic transducer PctB | |
| PA4309 | -1 | 7 | -0.671721 | chemotactic transducer PctA | |
| PA4308 | -1 | 7 | 0.215325 | hypothetical protein | |
| PA4307 | 0 | 8 | 0.045758 | chemotactic transducer PctC | |
| PA4306 | 0 | 13 | 1.084976 | type IVb pilin Flp | |
| PA4305 | 2 | 13 | 1.304791 | hypothetical protein | |
| PA4304 | 2 | 13 | 1.435001 | type II/III secretion system protein | |
| PA4303 | 3 | 12 | 1.711720 | hypothetical protein | |
| PA4302 | 1 | 15 | 0.101584 | ATPase TadA | |
| PA4301 | 1 | 16 | -0.432600 | type II secretion system protein TadB | |
| PA4300 | 0 | 20 | -2.319386 | type II secretion system protein TadC | |
| PA4299 | 0 | 24 | -2.949108 | type II secretion system protein TadD | |
| PA4298 | -1 | 20 | -1.589414 | hypothetical protein | |
| PA4297 | -2 | 15 | -1.925337 | hypothetical protein | |
| PA4296 | -1 | 15 | -1.838349 | two-component response regulator PprB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4310 | GPOSANCHOR | 30 | 0.030 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4309 | RTXTOXINA | 31 | 0.018 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4307 | RTXTOXINA | 31 | 0.019 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4304 | BCTERIALGSPD | 146 | 2e-40 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4303 | HTHFIS | 33 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4298 | TYPE3OMGPROT | 27 | 0.013 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4297 | BCTERIALGSPC | 30 | 0.031 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4296 | HTHFIS | 74 | 4e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 85 | PA4282 | PA4276 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4282 | 3 | 20 | -2.678091 | exonuclease | |
| PA4281 | -1 | 30 | -5.272952 | exonuclease SbcD | |
| PA4280 | 0 | 35 | -6.972959 | **biotin--protein ligase | |
| PA4279 | 0 | 33 | -7.220978 | pantothenate kinase | |
| PA4278 | 1 | 34 | -7.461012 | hypothetical protein | |
| PA4277 | 3 | 38 | -7.789055 | ***elongation factor Tu | |
| PA4276 | 3 | 40 | -8.003651 | *preprotein translocase subunit SecE |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4282 | RTXTOXIND | 44 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4279 | PF03309 | 112 | 3e-32 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4277 | TCRTETOQM | 77 | 2e-17 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4276 | SECETRNLCASE | 130 | 2e-42 | Bacterial translocase SecE signature. | |
>SECETRNLCASE#Bacterial translocase SecE signature. | |||||
| 86 | PA4213 | PA4206 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4213 | 1 | 9 | 1.137015 | phenazine biosynthesis protein PhzD | |
| PA4212 | -1 | 9 | 0.774700 | phenazine biosynthesis protein PhzC | |
| PA4211 | -1 | 7 | 0.295312 | phenazine biosynthesis protein | |
| PA4210 | -2 | 8 | 1.246014 | phenazine biosynthesis protein | |
| PA4209 | -2 | 8 | 1.719543 | phenazine-specific methyltransferase | |
| PA4208 | -1 | 11 | 2.362523 | hypothetical protein | |
| PA4207 | -1 | 10 | 2.137810 | resistance-nodulation-cell division (RND) efflux | |
| PA4206 | -2 | 9 | 3.120789 | resistance-nodulation-cell division (RND) efflux |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4213 | ISCHRISMTASE | 351 | e-125 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4208 | RTXTOXIND | 29 | 0.032 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4207 | ACRIFLAVINRP | 802 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4206 | RTXTOXIND | 46 | 1e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 87 | PA4166 | PA4159 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4166 | 0 | 11 | 4.096075 | acetyltransferase | |
| PA4165 | 0 | 10 | 5.193538 | transcriptional regulator | |
| PA4164 | 0 | 9 | 4.882827 | hypothetical protein | |
| PA4163 | 1 | 8 | 4.894122 | amidase | |
| PA4162 | 2 | 10 | 4.905111 | short-chain dehydrogenase | |
| PA4161 | -2 | 11 | 3.295108 | ferric enterobactin transporter FepG | |
| PA4160 | -2 | 11 | 2.782094 | ferric enterobactin transporter FepD | |
| PA4159 | -1 | 11 | 1.936628 | iron-enterobactin transporter periplasmic |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4166 | SACTRNSFRASE | 39 | 1e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4162 | DHBDHDRGNASE | 119 | 6e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4160 | PF04335 | 30 | 0.010 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4159 | FERRIBNDNGPP | 37 | 5e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 88 | PA4148 | PA4142 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4148 | -1 | 8 | 2.640354 | short-chain dehydrogenase | |
| PA4147 | 0 | 10 | 2.361639 | transcriptional regulator AcoR | |
| PA4145a | 0 | 11 | 1.637716 | hypothetical protein | |
| PA4145 | -1 | 12 | 1.659886 | transcriptional regulator | |
| PA4144 | -1 | 13 | 1.365157 | hypothetical protein | |
| PA4143 | -1 | 10 | 0.830148 | toxin transporter | |
| PA4142 | -1 | 10 | 0.600961 | secretion protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4148 | DHBDHDRGNASE | 127 | 2e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4147 | HTHFIS | 339 | e-112 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4145a | FLGHOOKFLIK | 29 | 0.025 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4144 | GPOSANCHOR | 30 | 0.015 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4142 | RTXTOXIND | 156 | 5e-45 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 89 | PA4084 | PA4078 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA4084 | 0 | 19 | -0.171325 | usher CupB3 | |
| PA4083 | 0 | 14 | 0.256542 | chaperone CupB4 | |
| PA4082 | 0 | 14 | -0.167937 | adhesive protein CupB5 | |
| PA4081 | 0 | 14 | -0.538678 | fimbrial subunit CupB6 | |
| PA4080 | 0 | 13 | 0.278887 | response regulator | |
| PA4079 | -1 | 10 | 1.787676 | short-chain dehydrogenase | |
| PA4078 | -2 | 8 | 1.876689 | nonribosomal peptide synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4084 | PF00577 | 740 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4082 | PF05860 | 79 | 1e-19 | haemagglutination activity domain. | |
>PF05860#haemagglutination activity domain. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4080 | HTHFIS | 56 | 1e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4079 | DHBDHDRGNASE | 64 | 2e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA4078 | NUCEPIMERASE | 45 | 1e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 90 | PA3974 | PA3969a | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3974 | 0 | 11 | 2.016218 | lost adherence sensor LadS | |
| PA3973 | 0 | 11 | 2.740643 | transcriptional regulator | |
| PA3972 | 1 | 13 | 2.525641 | acyl-CoA dehydrogenase | |
| PA3971 | 1 | 12 | 2.259460 | hypothetical protein | |
| PA3970 | 0 | 10 | 1.475862 | AMP nucleosidase | |
| PA3969a | -1 | 11 | 0.110519 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3974 | HTHFIS | 73 | 2e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3973 | HTHTETR | 60 | 2e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3970 | MYCMG045 | 32 | 0.007 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3969a | SECA | 41 | 1e-06 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 91 | PA3953 | PA3946 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3953 | -1 | 10 | 0.841912 | hypothetical protein | |
| PA3952 | -1 | 12 | -0.614991 | hypothetical protein | |
| PA3951 | 0 | 12 | -1.550572 | hypothetical protein | |
| PA3950 | 1 | 13 | -1.504763 | ATP-dependent RNA helicase | |
| PA3949 | 2 | 14 | -1.707888 | hypothetical protein | |
| PA3948 | 2 | 16 | -1.365554 | two-component response regulator RocA1 | |
| PA3947 | 1 | 15 | -0.973979 | DNA-binding response regulator RocR | |
| PA3946 | 1 | 14 | 0.006425 | two-component sensor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3953 | ISCHRISMTASE | 46 | 2e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3950 | TONBPROTEIN | 32 | 0.003 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3948 | HTHFIS | 73 | 4e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3947 | HTHFIS | 53 | 1e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3946 | HTHFIS | 64 | 2e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 92 | PA3883 | PA3876 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3883 | 1 | 13 | 2.327333 | short-chain dehydrogenase | |
| PA3882 | 0 | 13 | 0.890690 | hypothetical protein | |
| PA3881 | -1 | 13 | 0.561384 | hypothetical protein | |
| PA3880 | 0 | 15 | 0.265195 | hypothetical protein | |
| PA3879 | 0 | 16 | -0.138623 | transcriptional regulator NarL | |
| PA3878 | -1 | 15 | 0.027867 | two-component sensor NarX | |
| PA3877 | -1 | 15 | -0.383248 | nitrite extrusion protein 1 | |
| PA3876 | -1 | 14 | 0.045579 | nitrite extrusion protein 2 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3883 | DHBDHDRGNASE | 87 | 3e-22 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3879 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3878 | PF06580 | 43 | 2e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3877 | TCRTETA | 41 | 5e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3876 | TCRTETA | 30 | 0.019 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 93 | PA3846 | PA3838 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3846 | -1 | 13 | -0.091179 | hypothetical protein | |
| PA3845 | 0 | 11 | -0.208751 | transcriptional regulator | |
| PA3844 | -1 | 9 | -0.556070 | hypothetical protein | |
| PA3842 | 1 | 9 | -0.729270 | chaperone | |
| PA3841 | 0 | 6 | -0.620006 | exoenzyme S | |
| PA3840 | 0 | 8 | -0.523137 | SAM-dependent methyltransferase | |
| PA3839 | 1 | 13 | -1.125282 | sodium:sulfate symporter | |
| PA3838 | 0 | 15 | -1.483069 | ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3846 | ISCHRISMTASE | 43 | 1e-07 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3842 | SYCECHAPRONE | 169 | 4e-58 | Gram-negative bacterial type III secretion SycE cha... | |
>SYCECHAPRONE#Gram-negative bacterial type III secretion SycE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3841 | YERSINIAYOPE | 218 | 7e-71 | Yersinia virulence determinant YopE protein signature. | |
>YERSINIAYOPE#Yersinia virulence determinant YopE protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3838 | BINARYTOXINB | 30 | 0.008 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| 94 | PA3724 | PA3714 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3724 | -1 | 7 | -0.895214 | elastase LasB | |
| PA3723 | 0 | 13 | 0.808709 | FMN oxidoreductase | |
| PA3722 | 1 | 18 | 0.142910 | hypothetical protein | |
| PA3721 | -2 | 13 | -0.577477 | transcriptional regulator | |
| PA3720 | -2 | 12 | -0.275463 | hypothetical protein | |
| PA3719 | -2 | 11 | -0.591063 | MexR antirepressor ArmR | |
| PA3718 | -2 | 10 | -0.398092 | major facilitator superfamily transporter | |
| PA3717 | -1 | 11 | -0.703735 | FkbP-type peptidyl-prolyl cis-trans isomerase | |
| PA3716 | -1 | 12 | -0.353009 | hypothetical protein | |
| PA3715 | -1 | 10 | 0.604393 | hypothetical protein | |
| PA3714 | -1 | 8 | 0.254141 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3724 | THERMOLYSIN | 399 | e-136 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3721 | HTHTETR | 64 | 7e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3718 | TCRTETB | 59 | 1e-11 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3717 | INFPOTNTIATR | 80 | 5e-22 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3714 | HTHFIS | 61 | 3e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 95 | PA3709 | PA3699 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3709 | -1 | 8 | 0.681026 | major facilitator superfamily transporter | |
| PA3708 | 0 | 10 | 0.817924 | chemotaxis transducer | |
| PA3707 | 1 | 11 | 1.397791 | hypothetical protein | |
| PA3706 | 0 | 21 | 0.701956 | biofilm formation methyltransferase WspC | |
| PA3705 | 0 | 15 | -0.367061 | hypothetical protein | |
| PA3704 | 0 | 15 | -0.432563 | chemotaxis sensor/effector fusion protein | |
| PA3703 | 0 | 18 | -1.767154 | chemotaxis-specific methylesterase | |
| PA3702 | 2 | 16 | -1.885049 | two-component response regulator | |
| PA3701 | 1 | 17 | -2.141288 | peptide chain release factor 1 | |
| PA3700 | 0 | 12 | -1.345495 | lysine--tRNA ligase | |
| PA3699 | -1 | 11 | -0.951658 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3709 | TCRTETA | 35 | 6e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3706 | FLGHOOKFLIK | 29 | 0.036 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3704 | HTHFIS | 74 | 7e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3703 | HTHFIS | 52 | 2e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3702 | HTHFIS | 68 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3699 | HTHTETR | 52 | 4e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 96 | PA3467 | PA3459 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3467 | 1 | 10 | 1.718731 | major facilitator superfamily transporter | |
| PA3466 | 0 | 11 | 1.611104 | ATP-dependent RNA helicase | |
| PA3465 | 0 | 11 | 2.081092 | hypothetical protein | |
| PA3464 | -1 | 10 | 1.733958 | hypothetical protein | |
| PA3463 | -1 | 10 | 1.476811 | hypothetical protein | |
| PA3462 | -1 | 11 | 1.967381 | sensor/response regulator hybrid protein | |
| PA3461 | -2 | 11 | 3.060323 | hypothetical protein | |
| PA3460 | 0 | 10 | 2.446086 | acetyltransferase | |
| PA3459 | 0 | 9 | 2.024746 | glutamine amidotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3467 | TCRTETA | 58 | 3e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3465 | TCRTETA | 43 | 3e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3464 | PRPHPHLPASEC | 38 | 4e-05 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3462 | HTHFIS | 69 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3460 | SACTRNSFRASE | 35 | 3e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3459 | ANTHRAXTOXNA | 33 | 0.003 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 97 | PA3407 | PA3400 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3407 | 2 | 13 | 3.352576 | heme acquisition protein HasA | |
| PA3406 | 2 | 12 | 3.310902 | transporter HasD | |
| PA3405 | 1 | 12 | 1.936538 | metalloprotease secretion protein | |
| PA3404 | 2 | 13 | 0.620261 | hypothetical protein | |
| PA3403a | 1 | 13 | -0.397989 | hypothetical protein | |
| PA3403 | 1 | 14 | 0.186406 | hypothetical protein | |
| PA3402 | 1 | 15 | -0.094635 | hypothetical protein | |
| PA3401 | 2 | 15 | 0.063146 | hypothetical protein | |
| PA3400 | 2 | 16 | 0.897137 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3407 | PF06438 | 276 | 1e-97 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3405 | RTXTOXIND | 417 | e-145 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3404 | RTXTOXIND | 32 | 0.007 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3402 | RTXTOXIND | 56 | 6e-11 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3400 | ABC2TRNSPORT | 28 | 0.039 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| 98 | PA3206 | PA3202 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3206 | 2 | 16 | 0.589747 | two-component sensor | |
| PA3205 | 1 | 13 | 0.155566 | hypothetical protein | |
| PA3204 | 0 | 13 | 0.178246 | two-component response regulator | |
| PA3203 | 1 | 14 | -0.744538 | hypothetical protein | |
| PA3202 | 3 | 11 | -0.128251 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3206 | PF06580 | 29 | 0.026 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3204 | HTHFIS | 103 | 9e-28 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3203 | IGASERPTASE | 28 | 0.010 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3202 | adhesinmafb | 30 | 9e-04 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 99 | PA3147 | PA3141 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3147 | 2 | 49 | -8.723325 | glycosyl transferase WbpJ | |
| PA3146 | 2 | 46 | -7.501433 | NAD-dependent epimerase/dehydratase | |
| PA3145 | 0 | 31 | -5.735572 | glycosyltransferase WbpL | |
| PA3143 | 0 | 18 | -3.636019 | hypothetical protein | |
| PA3142 | 0 | 11 | -3.375712 | hypothetical protein | |
| PA3141 | -1 | 8 | -2.697242 | nucleotide sugar epimerase/dehydratase WbpM |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3147 | ANTHRAXTOXNA | 34 | 0.002 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3146 | NUCEPIMERASE | 79 | 1e-18 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3145 | RTXTOXIND | 29 | 0.031 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3141 | NUCEPIMERASE | 57 | 9e-11 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 100 | PA3110 | PA3087 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3110 | 1 | 7 | -0.338986 | hypothetical protein | |
| PA3109 | 1 | 7 | -0.801781 | hypothetical protein | |
| PA3108 | 2 | 7 | -0.254626 | amidophosphoribosyltransferase | |
| PA3107 | 0 | 5 | 0.674419 | O-succinylhomoserine sulfhydrylase | |
| PA3106 | 0 | 6 | 0.144770 | oxidoreductase | |
| PA3105 | 0 | 7 | 0.122476 | type II secretion system protein D | |
| PA3104 | 1 | 10 | 1.076434 | type II secretion system protein N | |
| PA3103 | 1 | 13 | 1.512249 | type II secretion system protein E | |
| PA3102 | 0 | 14 | 1.002840 | type II secretion system protein F | |
| PA3101 | 2 | 14 | 1.690577 | type II secretion system protein G | |
| PA3100 | 4 | 16 | 2.628003 | type II secretion system protein H | |
| PA3099 | 3 | 11 | 2.624324 | type II secretion system protein I | |
| PA3098 | 2 | 11 | 2.557691 | type II secretion system protein J | |
| PA3097 | -1 | 10 | 2.013545 | type II secretion system protein K | |
| PA3096 | 0 | 9 | 2.314993 | type II secretion system protein L | |
| PA3095 | -1 | 8 | 2.258096 | type II secretion system protein M | |
| PA3094 | -1 | 8 | 2.403175 | ***transcriptional regulator | |
| PA3093 | -1 | 8 | 1.863780 | hypothetical protein | |
| PA3092 | -1 | 8 | 1.950361 | 2,4-dienoyl-CoA reductase | |
| PA3091 | 0 | 9 | 2.261164 | hypothetical protein | |
| PA3089a | 0 | 10 | 1.897830 | 1-aminocyclopropane-1-carboxylate deaminase | |
| PA3089 | 0 | 8 | 0.687222 | hypothetical protein | |
| PA3088 | -1 | 9 | -0.690458 | NAD kinase | |
| PA3087 | -1 | 10 | -1.006930 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3110 | PERTACTIN | 31 | 0.003 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3106 | DHBDHDRGNASE | 115 | 4e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3105 | BCTERIALGSPD | 595 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3104 | BCTERIALGSPC | 49 | 3e-09 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3102 | BCTERIALGSPF | 501 | e-180 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3101 | BCTERIALGSPG | 212 | 3e-74 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3100 | BCTERIALGSPH | 143 | 3e-46 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3099 | BCTERIALGSPG | 35 | 2e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3098 | PilS_PF08805 | 36 | 7e-05 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3095 | PYOCINKILLER | 28 | 0.027 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3091 | RTXTOXIND | 51 | 4e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3089 | FLGFLIJ | 29 | 0.020 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3088 | PF06057 | 29 | 0.028 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3087 | ANTHRAXTOXNA | 31 | 0.008 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 101 | PA3079 | PA3074 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA3079 | 1 | 11 | 1.097761 | hypothetical protein | |
| PA3078 | 2 | 13 | 2.954193 | two-component sensor | |
| PA3077 | 3 | 13 | 3.713310 | two-component response regulator | |
| PA3076 | 3 | 11 | 3.767853 | hypothetical protein | |
| PA3075 | 2 | 11 | 3.287898 | hypothetical protein | |
| PA3074 | 2 | 11 | 2.810831 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3079 | ACRIFLAVINRP | 71 | 1e-14 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3078 | PF07675 | 32 | 0.005 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3077 | HTHFIS | 84 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA3074 | TYPE4SSCAGX | 37 | 2e-04 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| 102 | PA2918 | PA2913 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2918 | 0 | 11 | 2.643386 | short-chain dehydrogenase | |
| PA2917 | 2 | 11 | 3.667815 | transcriptional regulator | |
| PA2916 | 1 | 13 | 2.888109 | hypothetical protein | |
| PA2915 | 0 | 13 | 2.524181 | hypothetical protein | |
| PA2914 | 0 | 13 | 3.248567 | ABC transporter permease | |
| PA2913 | -2 | 13 | 3.144189 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2918 | DHBDHDRGNASE | 69 | 4e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2917 | PF05272 | 28 | 0.034 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2915 | PF05932 | 27 | 0.049 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2913 | FERRIBNDNGPP | 38 | 3e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 103 | PA2894 | PA2881 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2894 | -1 | 14 | 1.705669 | hypothetical protein | |
| PA2893 | -2 | 15 | 1.703180 | long-chain-acyl-CoA synthetase | |
| PA2892 | -1 | 16 | 2.113229 | short-chain dehydrogenase | |
| PA2891 | -1 | 14 | 2.180578 | geranyl-CoA carboxylase subunit alpha | |
| PA2890 | -1 | 14 | 1.466632 | isohexenylglutaconyl-CoA hydratase | |
| PA2889 | -1 | 13 | 0.786285 | citronellyl-CoA dehydrogenase | |
| PA2888 | -1 | 11 | 1.295181 | geranyl-CoA carboxylase subunit beta | |
| PA2887 | 1 | 10 | 1.200188 | citronellol catabolism dehydrogenase | |
| PA2886 | 2 | 11 | 1.469588 | hypothetical protein | |
| PA2885 | 3 | 12 | 0.443743 | atu genes repressor | |
| PA2884 | 1 | 11 | 1.136457 | hypothetical protein | |
| PA2883 | 1 | 11 | 1.277783 | hypothetical protein | |
| PA2882 | 0 | 10 | 1.542783 | two-component sensor | |
| PA2881 | 0 | 10 | 1.794705 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2894 | IGASERPTASE | 33 | 3e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2892 | DHBDHDRGNASE | 81 | 3e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2891 | RTXTOXIND | 38 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2890 | adhesinmafb | 29 | 0.016 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2887 | DHBDHDRGNASE | 119 | 3e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2885 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2882 | PF06580 | 45 | 2e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2881 | HTHFIS | 98 | 5e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 104 | PA2678 | PA2665 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2678 | -1 | 32 | -3.333553 | ABC transporter permease | |
| PA2677 | 1 | 33 | -2.351316 | type II secretion protein | |
| PA2676 | 1 | 37 | -1.868813 | type II secretion system protein | |
| PA2675 | 1 | 42 | -2.066609 | type II secretion system protein | |
| PA2674 | 2 | 43 | -2.474295 | type II secretion system protein | |
| PA2673 | 2 | 39 | -3.049280 | type II secretion system protein | |
| PA2672 | 2 | 36 | -3.928556 | type II secretion system protein | |
| PA2671 | 1 | 25 | -1.790608 | hypothetical protein | |
| PA2670 | 0 | 17 | -1.485216 | hypothetical protein | |
| PA2669 | -1 | 13 | -1.304852 | hypothetical protein | |
| PA2667 | 1 | 11 | 0.205018 | hypothetical protein | |
| PA2666 | 0 | 9 | 1.055400 | 6-carboxytetrahydropterin synthase QueD | |
| PA2665 | -1 | 7 | 2.284721 | anaerobic nitric oxide reductase transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2678 | ABC2TRNSPORT | 34 | 5e-04 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2676 | BCTERIALGSPF | 189 | 3e-58 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2675 | BCTERIALGSPG | 118 | 3e-37 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2674 | BCTERIALGSPG | 39 | 1e-06 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2673 | PilS_PF08805 | 30 | 0.003 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2672 | BCTERIALGSPG | 30 | 0.003 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2667 | PYOCINKILLER | 29 | 0.005 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2665 | HTHFIS | 386 | e-132 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 105 | PA2659 | PA2654 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2659 | 0 | 10 | 1.004709 | hypothetical protein | |
| PA2658 | 0 | 8 | 0.673980 | hypothetical protein | |
| PA2657 | 0 | 9 | 0.661346 | two-component response regulator | |
| PA2656 | 1 | 8 | 0.134170 | two-component sensor | |
| PA2655 | 0 | 9 | 0.138129 | hypothetical protein | |
| PA2654 | 1 | 11 | -0.170868 | chemotaxis transducer |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2659 | THERMOLYSIN | 27 | 0.010 | Thermolysin metalloprotease (M4) family signature. | |
>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2657 | HTHFIS | 78 | 9e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2656 | PF06580 | 38 | 5e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2654 | FLAGELLIN | 30 | 0.041 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| 106 | PA2528 | PA2520 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2528 | 2 | 14 | 0.878520 | resistance-nodulation-cell division (RND) efflux | |
| PA2527 | 2 | 14 | 1.300406 | resistance-nodulation-cell division (RND) efflux | |
| PA2526 | 1 | 12 | 1.840520 | resistance-nodulation-cell division (RND) efflux | |
| PA2525 | 0 | 12 | 1.818934 | hypothetical protein | |
| PA2524 | -1 | 11 | 1.712362 | two-component sensor | |
| PA2523 | -1 | 12 | 1.387825 | two-component response regulator | |
| PA2522 | 0 | 12 | 1.393460 | outer membrane protein CzcC | |
| PA2521 | -1 | 12 | 1.146264 | resistance-nodulation-cell division (RND) | |
| PA2520 | 0 | 13 | 0.982726 | resistance-nodulation-cell division (RND) |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2528 | RTXTOXIND | 45 | 5e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2527 | ACRIFLAVINRP | 840 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2526 | ACRIFLAVINRP | 816 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2525 | RTXTOXIND | 38 | 6e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2524 | PF06580 | 36 | 3e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2523 | HTHFIS | 81 | 7e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2521 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2520 | ACRIFLAVINRP | 811 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 107 | PA2021 | PA2018 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA2021 | 0 | 11 | 0.952274 | hypothetical protein | |
| PA2020 | 0 | 11 | 0.690465 | transcriptional regulator | |
| PA2019 | 1 | 12 | 0.921620 | multidrug efflux lipoprotein | |
| PA2018 | 0 | 12 | 0.368888 | multidrug efflux protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2021 | PF05272 | 28 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2020 | HTHTETR | 97 | 3e-27 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2019 | RTXTOXIND | 42 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA2018 | ACRIFLAVINRP | 1091 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 108 | PA1728 | PA1721 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1728 | -2 | 7 | -0.086857 | hypothetical protein | |
| PA1727 | -1 | 8 | -0.027073 | signaling protein | |
| PA1726 | 0 | 9 | 0.061638 | beta-glucosidase | |
| PA1725 | 4 | 17 | -0.010990 | type III secretion system protein | |
| PA1724 | 4 | 18 | -0.816155 | type III export protein PscK | |
| PA1723 | 3 | 18 | -1.434019 | type III export protein PscJ | |
| PA1722 | 3 | 15 | 0.101276 | type III export protein PscI | |
| PA1721 | 1 | 15 | 0.316708 | type III export protein PscH |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1728 | SECBCHAPRONE | 26 | 0.025 | Bacterial protein-transport SecB chaperone protein ... | |
>SECBCHAPRONE#Bacterial protein-transport SecB chaperone protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1725 | TYPE4SSCAGX | 30 | 0.009 | Type IV secretion system CagX conjugation protein si... | |
>TYPE4SSCAGX#Type IV secretion system CagX conjugation protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1723 | FLGMRINGFLIF | 75 | 1e-17 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1721 | PF09025 | 205 | 2e-71 | YopR Core | |
>PF09025#YopR Core | |||||
| 109 | PA1716 | PA1706 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1716 | -2 | 19 | -0.884258 | type III secretion outer membrane protein PscC | |
| PA1715 | 1 | 28 | -2.025533 | type III export apparatus protein | |
| PA1714 | 2 | 25 | -2.322608 | hypothetical protein | |
| PA1713 | 3 | 25 | -2.766279 | exoenzyme S transcriptional regulator ExsA | |
| PA1712 | 2 | 22 | -1.035002 | exoenzyme S synthesis protein ExsB | |
| PA1711 | 2 | 19 | -1.553346 | hypothetical protein | |
| PA1710 | 2 | 17 | -1.564270 | exoenzyme S synthesis protein ExsC | |
| PA1709 | 2 | 16 | -0.632473 | translocator outer membrane protein PopD | |
| PA1708 | 3 | 13 | -1.043018 | translocator protein PopB | |
| PA1707 | 3 | 14 | -0.598363 | regulatory protein PcrH | |
| PA1706 | 4 | 15 | -0.037941 | type III secretion protein PcrV |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1716 | TYPE3OMGPROT | 816 | 0.0 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1715 | PF05932 | 93 | 2e-27 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1710 | PF05932 | 47 | 7e-10 | Tir chaperone protein (CesT) | |
>PF05932#Tir chaperone protein (CesT) | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1709 | PF05844 | 385 | e-137 | YopD protein | |
>PF05844#YopD protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1707 | SYCDCHAPRONE | 208 | 4e-72 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1706 | LCRVANTIGEN | 344 | e-121 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
| 110 | PA1698 | PA1690 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1698 | 1 | 16 | 2.159758 | type III secretion outer membrane protein PopN | |
| PA1697 | 0 | 16 | 1.821438 | type III secretion system ATPase | |
| PA1696 | 3 | 17 | 1.474566 | translocation protein in type III secretion | |
| PA1695 | 2 | 18 | 0.344332 | translocation protein in type III secretion | |
| PA1694 | 2 | 11 | -1.179490 | type III secretion system protein | |
| PA1693 | 1 | 10 | -1.744888 | type III secretion system protein | |
| PA1692 | 1 | 10 | -1.650617 | translocation protein in type III secretion | |
| PA1691 | 0 | 9 | -0.854465 | translocation protein in type III secretion | |
| PA1690 | -1 | 8 | -0.826011 | translocation protein in type III secretion |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1698 | PF07201 | 284 | 4e-98 | Hypersensitivity response secretion protein HrpJ | |
>PF07201#Hypersensitivity response secretion protein HrpJ | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1695 | IGASERPTASE | 40 | 1e-05 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1694 | TYPE3OMOPROT | 83 | 2e-20 | Type III secretion system outer membrane O protein ... | |
>TYPE3OMOPROT#Type III secretion system outer membrane O protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1693 | TYPE3IMPPROT | 246 | 3e-85 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1692 | TYPE3IMQPROT | 68 | 4e-19 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1691 | TYPE3IMRPROT | 141 | 5e-43 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1690 | TYPE3IMSPROT | 422 | e-150 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 111 | PA1461 | PA1432 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1461 | 2 | 12 | -1.202708 | flagellar motor protein MotD | |
| PA1460 | 1 | 12 | -1.336459 | flagellar motor protein | |
| PA1459 | 1 | 12 | -1.567433 | chemotaxis-specific methylesterase | |
| PA1458 | -1 | 11 | -1.282274 | two-component sensor | |
| PA1457 | 0 | 9 | -1.592002 | protein phosphatase CheZ | |
| PA1456 | 0 | 13 | -0.459239 | chemotaxis protein CheY | |
| PA1455 | 0 | 15 | 0.181610 | flagellar biosynthesis sigma factor FliA | |
| PA1454 | 1 | 15 | 0.411224 | flagellar synthesis regulator FleN | |
| PA1453 | 2 | 17 | 0.557393 | flagellar biosynthesis regulator FlhF | |
| PA1452 | 3 | 17 | 0.118638 | flagellar biosynthesis protein FlhA | |
| PA1451 | 3 | 20 | 0.158947 | hypothetical protein | |
| PA1450 | 4 | 19 | 0.004032 | hypothetical protein | |
| PA1449 | 6 | 19 | -0.669460 | flagellar biosynthesis protein FlhB | |
| PA1448 | 6 | 18 | -1.377531 | flagellar biosynthesis protein FliR | |
| PA1447 | 3 | 16 | -1.847776 | flagellar biosynthesis protein FliQ | |
| PA1446 | 0 | 11 | -0.556070 | flagellar biosynthesis protein FliP | |
| PA1445 | 1 | 9 | -0.232770 | flagellar protein FliO | |
| PA1444 | 0 | 8 | -0.842109 | flagellar motor switch protein FliN | |
| PA1443 | -1 | 10 | 0.238968 | flagellar motor switch protein FliM | |
| PA1442 | 0 | 10 | 0.645061 | flagellar basal body protein FliL | |
| PA1441 | 0 | 12 | 1.065403 | hypothetical protein | |
| PA1440 | 1 | 13 | 1.186448 | hypothetical protein | |
| PA1439 | 1 | 13 | 1.477253 | hypothetical protein | |
| PA1438 | 0 | 11 | 1.616378 | two-component sensor | |
| PA1437 | -1 | 10 | 0.519259 | two-component response regulator | |
| PA1436 | -2 | 9 | 0.217486 | resistance-nodulation-cell division (RND) efflux | |
| PA1435 | -1 | 13 | -1.193488 | resistance-nodulation-cell division (RND) efflux | |
| PA1434 | -2 | 10 | -0.661788 | hypothetical protein | |
| PA1433 | -2 | 11 | -0.894224 | hypothetical protein | |
| PA1432 | -3 | 11 | -1.298525 | acyl-homoserine-lactone synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1461 | OMPADOMAIN | 69 | 1e-15 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1459 | HTHFIS | 58 | 2e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1458 | PF06580 | 42 | 7e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1456 | HTHFIS | 90 | 2e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1451 | cloacin | 30 | 0.022 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1450 | cloacin | 36 | 3e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1449 | TYPE3IMSPROT | 336 | e-116 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1448 | TYPE3IMRPROT | 134 | 1e-40 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1447 | TYPE3IMQPROT | 55 | 9e-14 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1446 | FLGBIOSNFLIP | 264 | 2e-91 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1444 | FLGMOTORFLIN | 120 | 8e-38 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1443 | FLGMOTORFLIM | 259 | 2e-87 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1441 | FLGHOOKFLIK | 52 | 2e-09 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1438 | PF06580 | 29 | 0.035 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1437 | HTHFIS | 86 | 1e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1436 | ACRIFLAVINRP | 762 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1435 | RTXTOXIND | 50 | 7e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1432 | AUTOINDCRSYN | 153 | 5e-49 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| 112 | PA1403 | PA1396 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1403 | 0 | 10 | 3.138356 | transcriptional regulator | |
| PA1402 | 0 | 10 | 3.122376 | hypothetical protein | |
| PA1401 | 0 | 10 | 2.837402 | hypothetical protein | |
| PA1400 | 0 | 10 | 2.570246 | pyruvate carboxylase | |
| PA1399 | 0 | 13 | 1.539154 | transcriptional regulator | |
| PA1398 | 0 | 16 | -1.084702 | hypothetical protein | |
| PA1397 | 0 | 22 | -2.630059 | two-component response regulator | |
| PA1396 | -2 | 29 | -3.350014 | two-component sensor |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1403 | HTHTETR | 58 | 7e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1400 | RTXTOXIND | 37 | 4e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1397 | HTHFIS | 57 | 5e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1396 | HTHFIS | 50 | 2e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 113 | PA1384 | PA1377 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1384 | 1 | 33 | -5.819088 | UDP-glucose 4-epimerase | |
| PA1383 | 1 | 27 | -4.924545 | hypothetical protein | |
| PA1382 | -1 | 24 | -3.250018 | type II secretion system protein | |
| PA1381 | -2 | 14 | -0.793694 | hypothetical protein | |
| PA1380 | -1 | 14 | 1.215340 | transcriptional regulator | |
| PA1379 | -2 | 14 | 1.055476 | short-chain dehydrogenase | |
| PA1378 | -2 | 15 | 1.817305 | hypothetical protein | |
| PA1377 | 4 | 29 | -5.323086 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1384 | NUCEPIMERASE | 184 | 8e-58 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1382 | BCTERIALGSPD | 197 | 3e-56 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1379 | DHBDHDRGNASE | 110 | 3e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1377 | SACTRNSFRASE | 37 | 9e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 114 | PA1250 | PA1231 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1250 | -1 | 10 | 0.917413 | alkaline proteinase inhibitor AprI | |
| PA1249 | -2 | 10 | 0.728896 | alkaline metalloproteinase | |
| PA1248 | -3 | 9 | 1.904279 | alkaline protease secretion protein AprF | |
| PA1247 | -2 | 9 | 2.305410 | alkaline protease secretion protein AprE | |
| PA1246 | -1 | 8 | 2.252545 | alkaline protease secretion ATP-binding protein | |
| PA1245 | 0 | 9 | 2.074047 | hypothetical protein | |
| PA1244 | -1 | 9 | 2.408923 | hypothetical protein | |
| PA1243 | -1 | 9 | 3.514480 | sensor/response regulator hybrid protein | |
| PA1242 | 0 | 8 | 4.512510 | hypothetical protein | |
| PA1241 | 1 | 10 | 4.120091 | transcriptional regulator | |
| PA1240 | 2 | 9 | 4.466159 | enoyl-CoA hydratase | |
| PA1239 | 1 | 10 | 4.252447 | hypothetical protein | |
| PA1238 | 1 | 10 | 4.070914 | multidrug efflux pump outer membrane protein | |
| PA1237 | 0 | 12 | 3.255598 | multidrug resistance efflux pump | |
| PA1236 | 0 | 14 | 2.541302 | major facilitator superfamily transporter | |
| PA1235 | 0 | 16 | 2.643991 | transcriptional regulator | |
| PA1234 | 0 | 13 | 2.564434 | hypothetical protein | |
| PA1233 | 0 | 12 | 2.907887 | hypothetical protein | |
| PA1232 | 1 | 13 | 3.255663 | hypothetical protein | |
| PA1231 | 0 | 12 | 3.029666 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1250 | MPTASEINHBTR | 129 | 5e-42 | Metalloprotease inhibitor signature. | |
>MPTASEINHBTR#Metalloprotease inhibitor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1249 | CABNDNGRPT | 418 | e-145 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1247 | RTXTOXIND | 438 | e-154 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1243 | HTHFIS | 82 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1242 | SUBTILISIN | 88 | 3e-21 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1241 | HTHTETR | 60 | 1e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1237 | RTXTOXIND | 122 | 5e-33 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1236 | TCRTETB | 109 | 7e-28 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1235 | HTHFIS | 33 | 9e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1231 | RTXTOXIND | 66 | 4e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 115 | PA1165 | PA1157 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1165 | -1 | 14 | 2.714942 | 4'-phosphopantetheinyl transferase | |
| PA1164 | 0 | 14 | 1.938589 | hypothetical protein | |
| PA1163 | -1 | 10 | 1.934683 | glycosyl transferase | |
| PA1162 | -1 | 11 | 2.151691 | succinyl-diaminopimelate desuccinylase | |
| PA1161 | 0 | 15 | 0.297162 | rRNA methyltransferase | |
| PA1160 | 0 | 16 | -1.135680 | hypothetical protein | |
| PA1159 | 1 | 14 | -1.596278 | cold-shock protein | |
| PA1158 | 0 | 13 | -1.037022 | two-component sensor | |
| PA1157 | 0 | 13 | -2.713373 | two-component response regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1165 | ENTSNTHTASED | 89 | 2e-23 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1164 | ISCHRISMTASE | 30 | 0.009 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1163 | PF05704 | 31 | 0.024 | Capsular polysaccharide synthesis protein | |
>PF05704#Capsular polysaccharide synthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1158 | PF06580 | 42 | 3e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1157 | HTHFIS | 79 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 116 | PA1108 | PA1078 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA1108 | -1 | 8 | 1.431365 | major facilitator superfamily transporter | |
| PA1107 | 0 | 10 | -0.055397 | hypothetical protein | |
| PA1106 | 1 | 10 | 0.162995 | hypothetical protein | |
| PA1105 | 0 | 9 | -0.054294 | flagellar biosynthesis chaperone | |
| PA1104 | 0 | 8 | 0.387801 | flagellum-specific ATP synthase | |
| PA1103 | -1 | 9 | 0.270646 | flagellar assembly protein FliH | |
| PA1102 | -1 | 9 | -0.116485 | flagellar motor switch protein FliG | |
| PA1101 | -2 | 9 | -0.044761 | flagellar MS-ring protein | |
| PA1100 | 0 | 13 | -0.704181 | flagellar hook-basal body complex protein FliE | |
| PA1099 | -1 | 12 | -1.584539 | two-component response regulator | |
| PA1098 | 0 | 14 | -2.990456 | two-component sensor | |
| PA1097 | 0 | 16 | -4.404052 | transcriptional regulator FleQ | |
| PA1096 | -1 | 15 | -1.441699 | hypothetical protein | |
| PA1095 | -1 | 14 | -1.425869 | B-type flagellar protein FliS | |
| PA1094 | 0 | 13 | -1.258632 | B-type flagellar hook-associated protein | |
| PA1093 | 0 | 14 | -0.723586 | hypothetical protein | |
| PA1092 | -1 | 12 | -0.913244 | B-type flagellin | |
| PA1091 | -1 | 12 | -0.632063 | flagellar glycosyl transferase FgtA | |
| PA1090 | -1 | 9 | -2.200345 | hypothetical protein | |
| PA1089 | 0 | 8 | -1.609569 | hypothetical protein | |
| PA1088 | -1 | 9 | -1.426983 | hypothetical protein | |
| PA1087 | 0 | 9 | -1.368030 | flagellar hook-associated protein FlgL | |
| PA1086 | 0 | 10 | -1.019546 | flagellar hook-associated protein FlgK | |
| PA1085 | 1 | 13 | -1.129379 | peptidoglycan hydrolase FlgJ | |
| PA1084 | 3 | 13 | -1.829681 | flagellar basal body P-ring protein | |
| PA1083 | 3 | 13 | -2.687494 | flagellar basal body L-ring protein | |
| PA1082 | 3 | 13 | -3.140516 | flagellar basal body rod protein FlgG | |
| PA1081 | 1 | 12 | -3.391830 | flagellar basal body rod protein FlgF | |
| PA1080 | 1 | 12 | -3.379175 | flagellar hook protein FlgE | |
| PA1079 | 0 | 14 | -3.667849 | flagellar basal body rod modification protein | |
| PA1078 | 0 | 13 | -3.732849 | flagellar basal body rod protein FlgC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1108 | TCRTETA | 57 | 4e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1105 | FLGFLIJ | 54 | 2e-12 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1103 | FLGFLIH | 56 | 1e-11 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1102 | FLGMOTORFLIG | 305 | e-105 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1101 | FLGMRINGFLIF | 608 | 0.0 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1100 | FLGHOOKFLIE | 93 | 3e-28 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1099 | HTHFIS | 504 | e-179 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1098 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1097 | HTHFIS | 510 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1092 | FLAGELLIN | 204 | 7e-62 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1088 | PHPHTRNFRASE | 29 | 0.024 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1087 | FLAGELLIN | 52 | 2e-09 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1086 | FLGHOOKAP1 | 246 | 2e-75 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1085 | FLGFLGJ | 148 | 1e-43 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1084 | FLGPRINGFLGI | 436 | e-155 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1083 | FLGLRINGFLGH | 180 | 3e-59 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1082 | FLGHOOKAP1 | 45 | 2e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1080 | FLGHOOKAP1 | 45 | 5e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA1078 | FLGHOOKAP1 | 36 | 3e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 117 | PA0974 | PA0969 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0974 | 1 | 21 | -4.832310 | hypothetical protein | |
| PA0973 | 1 | 21 | -5.270237 | peptidoglycan associated lipoprotein OprL | |
| PA0972 | 1 | 20 | -4.941468 | translocation protein TolB | |
| PA0971 | 2 | 23 | -5.194336 | translocation protein TolA | |
| PA0970 | 2 | 24 | -4.543055 | translocation protein TolR | |
| PA0969 | 1 | 22 | -4.214492 | translocation protein TolQ |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0974 | RTXTOXIND | 32 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0973 | OMPADOMAIN | 116 | 6e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0971 | IGASERPTASE | 49 | 2e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0969 | 60KDINNERMP | 29 | 0.017 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| 118 | PA0756 | PA0749 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0756 | -2 | 11 | 0.466253 | two-component response regulator | |
| PA0755 | -2 | 11 | -0.205242 | cis-aconitate porin OpdH | |
| PA0754 | -1 | 9 | 0.234457 | hypothetical protein | |
| PA0753 | -1 | 7 | 0.386453 | hypothetical protein | |
| PA0752 | -1 | 9 | 0.400283 | hypothetical protein | |
| PA0751 | -1 | 10 | 0.800681 | hypothetical protein | |
| PA0750 | -1 | 10 | 0.704980 | uracil-DNA glycosylase | |
| PA0749 | -1 | 11 | 1.395401 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0756 | HTHFIS | 83 | 8e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0754 | AEROLYSIN | 29 | 0.028 | Aerolysin signature. | |
>AEROLYSIN#Aerolysin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0753 | ACRIFLAVINRP | 27 | 0.043 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0749 | PF05043 | 30 | 0.010 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| 119 | PA0687 | PA0677 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0687 | 1 | 11 | 3.462955 | type II secretion system protein | |
| PA0686 | 0 | 11 | 2.964710 | type II secretion system protein HxcR | |
| PA0685 | -1 | 12 | 2.691211 | type II secretion system protein | |
| PA0684 | 2 | 21 | 2.892275 | type II secretion system protein | |
| PA0683 | 1 | 19 | 3.124510 | type II secretion system protein | |
| PA0682 | 1 | 16 | 2.708585 | HxcX atypical pseudopilin | |
| PA0681 | 1 | 15 | 2.865486 | HxcT pseudopilin | |
| PA0680 | -1 | 15 | 2.418488 | HxcV pseudopilin | |
| PA0679 | -1 | 17 | 2.553433 | hypothetical protein | |
| PA0678 | -1 | 16 | 2.151263 | HxcU pseudopilin | |
| PA0677 | 0 | 14 | 1.572854 | HxcW pseudopilin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0687 | BCTERIALGSPF | 378 | e-131 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0685 | BCTERIALGSPD | 255 | 7e-77 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0681 | BCTERIALGSPG | 167 | 1e-56 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0680 | BCTERIALGSPG | 31 | 6e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0678 | BCTERIALGSPH | 51 | 1e-10 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0677 | BCTERIALGSPG | 32 | 6e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 120 | PA0603 | PA0599 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0603 | 0 | 13 | 0.082999 | ABC transporter ATP-binding protein | |
| PA0602 | 0 | 14 | 0.517403 | ABC transporter | |
| PA0601 | -1 | 13 | 0.581335 | two-component response regulator | |
| PA0600 | -1 | 15 | -1.698400 | two-component sensor | |
| PA0599 | 0 | 14 | -2.533586 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0603 | PF05272 | 34 | 0.001 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0602 | BICOMPNTOXIN | 29 | 0.028 | Staphylococcal bi-component toxin signature. | |
>BICOMPNTOXIN#Staphylococcal bi-component toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0601 | HTHFIS | 64 | 4e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0599 | CHANLCOLICIN | 29 | 0.031 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 121 | PA0463 | PA0458 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0463 | 0 | 14 | 0.127169 | DNA-binding response regulator CreB | |
| PA0462 | 1 | 13 | -0.078842 | hypothetical protein | |
| PA0461 | 1 | 12 | 0.014618 | acyltransferase | |
| PA0460 | 0 | 11 | 0.127630 | hypothetical protein | |
| PA0459 | 0 | 12 | 0.453229 | chaperone protein ClpB | |
| PA0458 | 2 | 10 | 0.670561 | major facilitator superfamily transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0463 | HTHFIS | 81 | 5e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0462 | NEISSPPORIN | 28 | 0.027 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0459 | HTHFIS | 49 | 6e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0458 | TCRTETB | 120 | 9e-32 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 122 | PA0428 | PA0421 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0428 | 0 | 12 | -1.110334 | ATP-dependent RNA helicase | |
| PA0427 | 0 | 13 | -1.728614 | outer membrane protein OprM | |
| PA0426 | -1 | 13 | -2.021413 | multidrug resistance protein MexB | |
| PA0425 | -1 | 10 | -1.446958 | multidrug resistance protein MexA | |
| PA0424 | -3 | 9 | -0.873026 | multidrug resistance operon repressor MexR | |
| PA0423 | -2 | 8 | 0.498054 | hypothetical protein | |
| PA0422 | -2 | 8 | 1.232363 | hypothetical protein | |
| PA0421 | -2 | 7 | 1.964034 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0428 | SECA | 38 | 1e-04 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0426 | ACRIFLAVINRP | 1353 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0425 | RTXTOXIND | 47 | 8e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0421 | FLGFLGJ | 30 | 0.016 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| 123 | PA0414 | PA0402 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0414 | 1 | 9 | 0.903620 | methylesterase | |
| PA0413 | 1 | 8 | 0.497700 | chemotactic signal transduction system protein | |
| PA0412 | 2 | 11 | -2.550658 | methyltransferase PilK | |
| PA0411 | 2 | 12 | -2.328213 | twitching motility protein PilJ | |
| PA0410 | 0 | 12 | -1.938277 | twitching motility protein PilI | |
| PA0409 | 0 | 14 | -1.572132 | twitching motility protein PilH | |
| PA0408 | 0 | 14 | -0.853585 | pilus biosynthesis/twitching motility protein | |
| PA0407 | -2 | 12 | -0.150935 | glutathione synthetase | |
| PA0406 | -1 | 13 | 1.487865 | transporter TonB | |
| PA0405 | -1 | 13 | 1.940718 | hypothetical protein | |
| PA0404 | 0 | 12 | 1.775867 | Holliday junction resolvase | |
| PA0403 | 1 | 12 | 1.127266 | bifunctional pyrimidine regulatory protein | |
| PA0402 | 2 | 13 | 0.911422 | aspartate carbamoyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0414 | HTHFIS | 30 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0413 | HTHFIS | 68 | 2e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0409 | HTHFIS | 80 | 8e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0408 | HTHFIS | 73 | 3e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0406 | PF03544 | 59 | 2e-12 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0402 | TYPE3IMPPROT | 29 | 0.032 | Type III secretion system inner membrane P protein ... | |
>TYPE3IMPPROT#Type III secretion system inner membrane P protein | |||||
| 124 | PA0373 | PA0367 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0373 | 0 | 12 | 1.395682 | signal recognition particle receptor FtsY | |
| PA0372 | 0 | 11 | 0.810403 | zinc protease | |
| PA0371 | -1 | 11 | 0.766829 | hypothetical protein | |
| PA0370 | -1 | 9 | 0.934947 | hypothetical protein | |
| PA0368 | -2 | 9 | 0.913200 | hypothetical protein | |
| PA0367a | -3 | 9 | -0.273948 | acetyltransferase | |
| PA0367 | -2 | 10 | -0.993440 | transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0373 | TONBPROTEIN | 47 | 4e-08 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0371 | PHPHTRNFRASE | 34 | 0.002 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0368 | PF06057 | 29 | 0.024 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0367 | HTHTETR | 59 | 5e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 125 | PA0167 | PA0156 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| PA0167 | -1 | 12 | 0.877365 | transcriptional regulator | |
| PA0166 | -1 | 10 | 0.692228 | transporter | |
| PA0165 | 1 | 10 | 0.211279 | hypothetical protein | |
| PA0164 | 0 | 11 | 0.116830 | gamma-glutamyltranspeptidase | |
| PA0163 | 0 | 9 | -0.204333 | transcriptional regulator | |
| PA0162 | 1 | 9 | 0.015461 | histidine porin OpdC | |
| PA0160 | 2 | 9 | 0.630402 | hypothetical protein | |
| PA0159 | 2 | 10 | 0.712671 | transcriptional regulator | |
| PA0158 | 1 | 11 | 0.653933 | resistance-nodulation-cell division (RND) efflux | |
| PA0157 | 2 | 12 | 2.405382 | resistance-nodulation-cell division (RND) efflux | |
| PA0156 | 1 | 11 | 2.051556 | resistance-nodulation-cell division (RND) efflux |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0167 | HTHTETR | 66 | 2e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0165 | CHANNELTSX | 46 | 7e-08 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0164 | PF09025 | 30 | 0.015 | YopR Core | |
>PF09025#YopR Core | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0163 | PHAGEIV | 30 | 0.009 | Gene IV protein signature. | |
>PHAGEIV#Gene IV protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0158 | ACRIFLAVINRP | 490 | e-159 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0157 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| PA0156 | RTXTOXIND | 49 | 1e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||