| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | CMM_0001 | CMM_0011 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0001 | 2 | 7 | -4.237679 | chromosomal replication initiator protein dnaA | |
| CMM_0002 | 0 | 6 | -3.661918 | DNA polymerase III, beta chain | |
| CMM_0003 | 0 | 6 | -3.822374 | 6-phosphogluconate dehydrogenase | |
| CMM_0004 | 0 | 6 | -3.745009 | DNA replication and repair protein RecF | |
| CMM_0005 | 1 | 6 | -4.560483 | conserved hypothetical protein | |
| CMM_0006 | 1 | 8 | -4.540975 | DNA gyrase subunit B | |
| CMM_0007 | 1 | 9 | -4.333549 | DNA gyrase subunit A | |
| CMM_0008 | 4 | 9 | -3.921772 | putative integral membrane protein | |
| CMM_0009 | 4 | 9 | -3.173983 | **hypothetical protein | |
| CMM_0010 | 2 | 8 | -2.244835 | peptidyl-prolyl cis-trans isomerase | |
| CMM_0011 | 2 | 8 | -1.011118 | conserved membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0001 | HTHFIS | 29 | 0.037 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 2 | CMM_0021 | CMM_0114 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0021 | 0 | 10 | 3.523045 | putative two-component system response | |
| CMM_0022 | 0 | 14 | 3.477969 | putative two-component system sensor kinase | |
| CMM_0023 | -1 | 17 | 2.815843 | conserved hypothetical protein | |
| CMM_0024 | -1 | 19 | 2.794993 | ATP-dependent DNA helicase | |
| CMM_0025 | 0 | 17 | 2.473798 | hypothetical protein | |
| CMM_0026 | 1 | 16 | 2.823104 | putative glutaminase | |
| CMM_0027 | 2 | 13 | 3.094022 | putative hydrolase/acyltransferase | |
| CMM_0028 | 1 | 13 | 3.428175 | putative membrane protein | |
| CMM_0029 | 0 | 9 | 2.774592 | conserved hypothetical protein | |
| CMM_0030 | 0 | 9 | 2.438301 | putative sugar phosphate isomerase/epimerase | |
| CMM_0031 | -1 | 16 | -0.507080 | putative dehydrogenase/oxidoreductase | |
| CMM_0032 | -1 | 27 | -2.501592 | putative transcriptional regulator, LacI family | |
| CMM_0033 | 1 | 32 | -4.262278 | hypothetical protein | |
| CMM_0034 | 1 | 33 | -5.327494 | hypothetical protein | |
| CMM_0035 | 3 | 40 | -6.103952 | putative extracellular serine protease, family | |
| CMM_0036 | 8 | 62 | -10.081674 | hypothetical protein | |
| CMM_PS_02 | 10 | 50 | -9.353153 | putative extracellular serine protease | |
| CMM_PS_03 | 15 | 64 | -11.602194 | conserved hypothetical protein, putative | |
| CMM_PS_04 | 13 | 56 | -10.603466 | conserved hypothetical protein, putative | |
| CMM_0039 | 12 | 46 | -9.285433 | hypothetical protein predicted by | |
| CMM_0041 | 13 | 52 | -10.414450 | hypothetical protein, putative phage protein | |
| CMM_0042 | 8 | 43 | -9.242124 | hypothetical protein | |
| CMM_0043 | 8 | 43 | -9.360578 | hypothetical protein | |
| CMM_0044 | 8 | 46 | -8.753776 | putative beta-N-acetylglucosaminidase | |
| CMM_0045 | 7 | 47 | -8.813866 | conserved hypothetical protein, putative | |
| CMM_PS_05 | 6 | 43 | -8.012799 | putative extracellular serine protease, family | |
| CMM_0046 | 6 | 33 | -6.395729 | putative extracellular serine protease, family | |
| CMM_0047 | 7 | 34 | -6.090514 | hypothetical protein | |
| CMM_0048 | 10 | 45 | -8.891189 | conserved hypothetical protein | |
| CMM_0049 | 10 | 51 | -9.912178 | hypothetical protein | |
| CMM_0050 | 9 | 52 | -10.254653 | hypothetical protein | |
| CMM_0051 | 7 | 53 | -9.982586 | hypothetical protein | |
| CMM_0052 | 7 | 52 | -9.207562 | putative extracellular serine protease | |
| CMM_0053 | 3 | 37 | -6.895094 | hypothetical protein | |
| CMM_0054 | 2 | 30 | -5.585437 | putative cell filamentation protein | |
| CMM_0055 | 2 | 29 | -4.378436 | conserved hypothetical protein | |
| CMM_0056 | 2 | 25 | -2.958704 | putative hydrolase | |
| CMM_0057 | 0 | 19 | -2.595579 | conserved hypothetical protein, putative | |
| CMM_0059 | 5 | 25 | -4.519781 | partitioning protein | |
| CMM_0060 | 5 | 22 | -3.564811 | putative ATPase | |
| CMM_0061 | 7 | 32 | -5.677876 | hypothetical protein predicted by | |
| CMM_PS_09 | 10 | 43 | -9.033482 | Na+/H+ antiporter, NhaA family | |
| CMM_PS_10 | 12 | 54 | -11.578214 | subtilisin-like serine protease, peptidase | |
| CMM_0062 | 9 | 42 | -8.630472 | conserved hypothetical protein | |
| CMM_0063 | 9 | 44 | -8.956768 | putative acyl-CoA synthetase (AMP-forming) | |
| CMM_0064 | 6 | 41 | -8.095594 | conserved hypothetical protein | |
| CMM_0065 | 4 | 23 | -3.631660 | putative extracellular serine protease | |
| CMM_0066 | 1 | 17 | -1.743461 | hypothetical protein | |
| CMM_0068 | 5 | 27 | -2.619882 | hypothetical protein | |
| CMM_0070 | 9 | 41 | -6.027244 | putative NADH oxidase | |
| CMM_PS_25 | 11 | 60 | -10.403417 | Conserved hypothetical protein | |
| CMM_0071 | 11 | 60 | -10.404495 | conserved hypothetical protein | |
| CMM_PS_11 | 11 | 57 | -10.508256 | putative short-chain dehydrogenase/reductase | |
| CMM_0072 | 12 | 56 | -12.285435 | putative beta-glucosidase | |
| CMM_0073 | 8 | 41 | -8.605249 | putative beta-glucosidase/beta-xylosidase | |
| CMM_0074 | 4 | 29 | -5.169571 | putative sugar ABC transporter, permease | |
| CMM_0075 | 4 | 29 | -5.064257 | putative sugar ABC transporter, permease | |
| CMM_0076 | 2 | 23 | -4.600621 | putative sugar ABC transporter, binding protein | |
| CMM_0077 | 0 | 27 | -4.875449 | transcriptional regulator, TetR family | |
| CMM_0079 | 3 | 29 | -6.613535 | putative beta-glucosidase | |
| CMM_0080 | 4 | 29 | -6.987419 | putative LacI-family transcriptional regulator | |
| CMM_0082 | 4 | 26 | -6.834484 | tomatinase, endo-1,4-beta-glycosidase | |
| CMM_0083 | 4 | 23 | -6.867291 | putative two-component system response | |
| CMM_0084 | 3 | 25 | -7.017651 | putative two-component system sensor kinase | |
| CMM_0085 | 3 | 26 | -7.194950 | putative transport protein, RND family | |
| CMM_0086 | 2 | 28 | -6.978495 | putative cytochrome P450 | |
| CMM_0087 | 0 | 32 | -6.290160 | putative 3Fe-4S ferredoxin | |
| CMM_0088 | 0 | 30 | -5.810026 | putative ferredoxin reductase | |
| CMM_0089 | 1 | 32 | -5.787476 | putative beta-glucosidase, glycosyl hydrolase | |
| CMM_0090 | 1 | 30 | -5.729917 | putative LacI-family transcriptional regulator | |
| CMM_0091 | 1 | 32 | -4.962276 | beta-glucosidase, glycosyl hydrolase family 3 | |
| CMM_0092 | 0 | 30 | -4.790859 | beta-glucosidase, glycosyl hydrolase family 1 | |
| CMM_0093 | 0 | 30 | -4.945054 | putative beta-galactosidase | |
| CMM_0094 | -1 | 32 | -5.183465 | putative beta-xylosidase, glycosyl hydrolase | |
| CMM_0095 | -1 | 31 | -5.184079 | putative sugar permease (MFS superfamily) | |
| CMM_0096 | -1 | 30 | -5.560377 | putative alpha-rhamnosidase | |
| CMM_0097 | 0 | 30 | -5.671188 | putative alpha-glucosidase, glycosyl hydrolase | |
| CMM_0098 | 0 | 31 | -5.941712 | putative sugar ABC transporter, permease | |
| CMM_0099 | 0 | 30 | -6.024179 | putative sugar ABC transporter, permease | |
| CMM_0100 | 1 | 31 | -6.661209 | putative sugar ABC transporter, binding protein | |
| CMM_0101 | 3 | 28 | -6.568595 | putative xylosidase, glycosyl hydrolase family | |
| CMM_0102 | 3 | 25 | -6.261331 | putative sugar phosphate isomerase/epimerase | |
| CMM_0103 | 4 | 24 | -6.216969 | putative dehydrogenase/oxidoreductase | |
| CMM_0104 | 4 | 22 | -6.112646 | putative hydrolase | |
| CMM_0105 | 5 | 22 | -6.176355 | hypothetical protein | |
| CMM_0106 | 4 | 18 | -5.139189 | putative dienelactone hydrolase | |
| CMM_0107 | 1 | 14 | -4.052680 | putative MFS-type efflux protein | |
| CMM_0108 | 0 | 12 | -2.869279 | putative TetR-family transcriptional regulator | |
| CMM_0109 | -1 | 10 | -1.617182 | transcriptional regulator, TetR family | |
| CMM_0110 | -3 | 12 | -0.076422 | putative urea amidolyase | |
| CMM_0111 | -1 | 9 | 2.294968 | conserved hypothetical protein | |
| CMM_0112 | 2 | 9 | 2.325495 | conserved hypothetical protein | |
| CMM_0113 | 2 | 10 | 2.206587 | putative amino acid permease, APC family | |
| CMM_0114 | 2 | 11 | 1.975572 | putative acyl-CoA synthetase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0023 | HTHFIS | 61 | 3e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0041 | V8PROTEASE | 46 | 9e-08 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0044 | V8PROTEASE | 46 | 8e-08 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0047 | TCRTETOQM | 26 | 0.027 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0052 | V8PROTEASE | 35 | 3e-04 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0053 | V8PROTEASE | 32 | 0.003 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0059 | V8PROTEASE | 32 | 0.003 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0062 | IGASERPTASE | 27 | 0.020 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0070 | SUBTILISIN | 109 | 5e-28 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0071 | V8PROTEASE | 32 | 0.002 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0075 | V8PROTEASE | 46 | 1e-07 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0081 | DHBDHDRGNASE | 82 | 2e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0084 | SECFTRNLCASE | 29 | 0.031 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0087 | HTHTETR | 67 | 9e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0089 | HTHTETR | 28 | 0.036 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0091 | HTHFIS | 66 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0093 | ACRIFLAVINRP | 46 | 6e-07 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0104 | TCRTETA | 48 | 3e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0109 | MALTOSEBP | 32 | 0.005 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 3 | CMM_0125 | CMM_0162 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0125 | 3 | 10 | 3.544443 | hypothetical protein | |
| CMM_0126 | 3 | 9 | 3.170497 | putative MFS transporter | |
| CMM_0127 | 0 | 8 | 1.646542 | conserved hypothetical protein | |
| CMM_0128 | 1 | 8 | 1.094354 | conserved hypothetical protein | |
| CMM_0129 | 1 | 9 | 2.037828 | putative secreted protein | |
| CMM_0130 | 3 | 21 | -2.865689 | hypothetical protein | |
| CMM_0131 | 7 | 34 | -6.863480 | hypothetical protein | |
| CMM_0132 | 6 | 28 | -5.833017 | conserved hypothetical protein | |
| CMM_0133 | 7 | 30 | -6.305976 | hypothetical protein | |
| CMM_0134 | 7 | 32 | -6.312764 | hypothetical protein, putative peptidase | |
| CMM_0135 | 8 | 36 | -8.203978 | conserved hypothetical protein | |
| CMM_0136 | 6 | 20 | -5.053521 | hypothetical protein | |
| CMM_0137 | -1 | 9 | -0.149443 | hypothetical protein | |
| CMM_0138 | -1 | 12 | -0.324546 | putative cell wall surface anchor family | |
| CMM_0139 | 1 | 14 | -0.205530 | chaperone (HSP70) | |
| CMM_0140 | 2 | 19 | -0.792944 | heat shock chaperone | |
| CMM_0141 | 4 | 19 | -0.066505 | chaperone, curved DNA-binding protein | |
| CMM_0142 | 2 | 17 | 0.624212 | heat shock regulator, transcriptional | |
| CMM_0143 | 2 | 17 | 1.440037 | putative methyltransferase | |
| CMM_0144 | 3 | 14 | 1.729855 | conserved hypothetical protein | |
| CMM_0145 | 5 | 8 | 2.094369 | transcriptional regulator, Cro/CI family | |
| CMM_0146 | 3 | 9 | 0.925404 | putative membrane protein | |
| CMM_0147 | 2 | 9 | 0.360096 | conserved hypothetical protein | |
| CMM_0148 | 2 | 8 | 0.161087 | hypothetical protein | |
| CMM_0149 | 2 | 7 | -0.144116 | putative transcriptional regulator, LacI-family | |
| CMM_0150 | 1 | 6 | 0.497333 | conserved hypothetical protein | |
| CMM_0151 | 1 | 11 | -0.256523 | conserved hypothetical protein | |
| CMM_0152 | -1 | 10 | 1.856420 | hypothetical protein | |
| CMM_0153 | -2 | 11 | 2.382649 | putative Fe3+-siderophore ABC transporter,ATPase | |
| CMM_0154 | 0 | 13 | 2.423407 | putative Fe3+-siderophore ABC | |
| CMM_0155 | 0 | 11 | 1.969383 | putative Fe3+-siderophore ABC | |
| CMM_0156 | 2 | 10 | 1.681007 | putative membrane protein | |
| CMM_0157 | 3 | 8 | 1.320934 | putative two-component system sensor kinase | |
| CMM_0158 | 4 | 8 | 2.272391 | putative two-component system response | |
| CMM_0159 | 4 | 9 | 2.723358 | putative tautomerase | |
| CMM_0160 | 2 | 8 | 3.126753 | putative acetyltransferase | |
| CMM_0161 | 2 | 7 | 2.617465 | conserved hypothetical protein | |
| CMM_0162 | 1 | 10 | 3.359534 | putative sulfate MFS permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0125 | ENTSNTHTASED | 88 | 3e-23 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0129 | PYOCINKILLER | 31 | 0.005 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0146 | PF06776 | 27 | 0.048 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0148 | cloacin | 34 | 5e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0150 | INTIMIN | 39 | 2e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0151 | SHAPEPROTEIN | 138 | 2e-38 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 4 | CMM_0186 | CMM_0196 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0186 | 2 | 13 | 1.574291 | hypothetical protein | |
| CMM_0187 | 4 | 13 | 1.382353 | putative glycosyl hydrolase, family 2 | |
| CMM_0188 | 3 | 12 | 1.006354 | putative dehydrogenase/oxidoreductase | |
| CMM_0189 | 2 | 10 | 2.312886 | putative drug exporter, RND family | |
| CMM_0190 | 2 | 8 | 3.021138 | putative transcriptional regulator, TetR-family | |
| CMM_0191 | -2 | 7 | 0.720861 | putative membrane protein | |
| CMM_0192 | -2 | 7 | -0.612336 | 3-hydroxyacyl-Coenzyme A dehydrogenase | |
| CMM_0193 | -1 | 7 | -1.706442 | conserved hypothetical protein | |
| CMM_0194 | -1 | 8 | -2.165745 | putative membrane-associated phospholipid | |
| CMM_0195 | 0 | 9 | -3.119475 | hypothetical membrane protein | |
| CMM_0196 | 0 | 11 | -3.866025 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0186 | SALSPVBPROT | 30 | 0.027 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0187 | HTHTETR | 50 | 9e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0188 | TCRTETB | 138 | 8e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0190 | TETREPRESSOR | 41 | 9e-07 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0193 | HTHTETR | 65 | 6e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 5 | CMM_0209 | CMM_0222 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0209 | 2 | 13 | -1.983670 | putative phosphatase | |
| CMM_0210 | 1 | 11 | -0.869581 | putative glycosyl transferase | |
| CMM_0211 | 0 | 10 | -0.052974 | putative sarcosine oxidase | |
| CMM_0212 | 2 | 14 | -0.083578 | hypothetical protein | |
| CMM_0213 | 2 | 15 | 0.071067 | putative acetyl xylan esterase | |
| CMM_0214 | 4 | 15 | 0.772016 | putative transcriptional regulator, TetR family | |
| CMM_0215 | 3 | 14 | 0.783832 | putative acyl esterase | |
| CMM_0216 | 4 | 15 | 0.521816 | putative peptide ABC transporter, ATP-binding | |
| CMM_0217 | 5 | 17 | 0.262363 | putative peptide ABC transporter, permease | |
| CMM_0218 | 5 | 11 | 1.404688 | putative peptide ABC transporter, permease | |
| CMM_0219 | 3 | 7 | 2.938093 | putative peptide ABC transporter, | |
| CMM_0220 | 2 | 8 | 2.792163 | hypothetical protein | |
| CMM_0221 | 2 | 9 | 3.284079 | hypothetical protein | |
| CMM_0222 | 0 | 7 | 3.009238 | conserved membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0215 | HTHTETR | 57 | 3e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 6 | CMM_0240 | CMM_0260 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0240 | 2 | 10 | 2.492569 | conserved hypothetical protein | |
| CMM_0241 | 11 | 46 | -8.316713 | putative transcriptional regulator, MerR family | |
| CMM_0242 | 10 | 40 | -7.123587 | conserved hypothetical protein | |
| CMM_0243 | 10 | 40 | -6.700904 | putative membrane protein involved in chromosome | |
| CMM_0244 | 10 | 38 | -6.428382 | putative membrane protein involved in chromosome | |
| CMM_0245 | 10 | 35 | -5.773936 | putative acetyltransferase | |
| CMM_0246 | 10 | 37 | -6.267834 | putative NTP pyrophosphohydrolases | |
| CMM_0247 | 1 | 7 | 2.391122 | putative D-alanine--D-alanine ligase | |
| CMM_0248 | 1 | 8 | 3.268187 | conserved hypothetical protein | |
| CMM_0249 | 0 | 9 | 2.614525 | conserved hypothetical protein | |
| CMM_0250 | 0 | 9 | 1.657051 | conserved membrane protein | |
| CMM_0251 | -1 | 8 | 1.606590 | Putative transcriptional regulator, RpiR family | |
| CMM_0252 | -1 | 8 | 1.513449 | putative hydroxyacid dehydrogenase | |
| CMM_0253 | -1 | 9 | 2.011217 | putative aldehyde dehydrogenase | |
| CMM_0254 | 0 | 9 | 1.335460 | putative sugar ABC transporter, substrate | |
| CMM_0255 | 1 | 10 | 1.601955 | putative sugar ABC transporter, permease | |
| CMM_0256 | 0 | 11 | 3.013517 | putative sugar ABC transporter, permease | |
| CMM_0257 | 1 | 10 | 3.026001 | trehalose utilization-related protein | |
| CMM_0258 | 2 | 11 | 3.556278 | putative dehydrogenase | |
| CMM_0259 | 2 | 13 | 4.061353 | putative ROK-family transcriptional regulator | |
| CMM_0260 | 2 | 14 | 3.145626 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0240 | DHBDHDRGNASE | 90 | 2e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0241 | TCRTETB | 25 | 0.044 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0244 | HTHFIS | 79 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0245 | GPOSANCHOR | 41 | 9e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0249 | DPTHRIATOXIN | 30 | 0.010 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0255 | TCRTETB | 139 | 2e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 7 | CMM_0274 | CMM_0283 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0274 | 1 | 10 | 3.468552 | putative RNA polymerase ECF-subfamily sigma | |
| CMM_0275 | 0 | 10 | 3.309852 | conserved membrane protein | |
| CMM_0276 | 1 | 9 | 2.797079 | hypothetical protein | |
| CMM_0277 | 3 | 9 | 3.882626 | putative MFS permease | |
| CMM_0278 | 2 | 8 | 3.589287 | conserved hypothetical protein | |
| CMM_0279 | 2 | 8 | 3.613380 | putative transcriptional regulator, LacI family | |
| CMM_0280 | 2 | 12 | 3.754926 | putative sugar ABC transporter, | |
| CMM_0281 | 3 | 12 | 3.782230 | putative sugar ABC transporter, permease | |
| CMM_0282 | 3 | 16 | 3.755898 | putative sugar ABC transporter, permease | |
| CMM_0283 | 2 | 16 | 2.431217 | putative beta-glycosidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0275 | BACYPHPHTASE | 29 | 0.030 | Salmonella/Yersinia modular tyrosine phosphatase si... | |
>BACYPHPHTASE#Salmonella/Yersinia modular tyrosine phosphatase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0277 | RTXTOXINA | 29 | 0.041 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0280 | PF07299 | 36 | 3e-05 | Fibronectin-binding protein (FBP) | |
>PF07299#Fibronectin-binding protein (FBP) | |||||
| 8 | CMM_0319 | CMM_0339 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0319 | 3 | 13 | 3.659556 | putative membrane protein | |
| CMM_0320 | 3 | 11 | 4.269261 | putative membrane protein | |
| CMM_0321 | 2 | 11 | 4.299157 | hypothetical protein | |
| CMM_0322 | 4 | 11 | 5.241864 | putative alkaline shock protein | |
| CMM_0323 | 3 | 9 | 5.707036 | putative transcriptional regulator, AraC family | |
| CMM_0324 | 3 | 9 | 5.506961 | conserved exported protein | |
| CMM_0325 | 2 | 8 | 4.914202 | conserved membrane protein | |
| CMM_0326 | 1 | 8 | 5.206727 | putative alpha-mannosidase | |
| CMM_0327 | 1 | 8 | 5.224910 | putative 6-phospho-beta-glucosidase | |
| CMM_0328 | 1 | 7 | 5.244840 | putative transcriptional regulator, DeoR family | |
| CMM_0329 | 1 | 7 | 5.054596 | putative carbohydrate kinase | |
| CMM_0330 | 1 | 8 | 4.834710 | putative sugar ABC transporter, substrate | |
| CMM_0331 | 0 | 9 | 5.157915 | putative sugar ABC transporter, permease | |
| CMM_0332 | -1 | 10 | 4.291314 | putative sugar ABC transporter, permease | |
| CMM_0333 | -1 | 8 | 3.270429 | putative glucosamine-6-phosphate isomerase | |
| CMM_0334 | -1 | 9 | 3.008252 | beta-galactosidase | |
| CMM_0335 | 0 | 9 | 2.411608 | putative acyl-CoA thioesterase | |
| CMM_0336 | 0 | 7 | 1.935792 | conserved hypothetical protein | |
| CMM_0337 | 1 | 9 | 1.825466 | putative transcriptional regulator, LacI family | |
| CMM_0338 | 2 | 12 | 0.862095 | putative sugar ABC transporter, | |
| CMM_0339 | 3 | 10 | 2.109240 | putative sugar ABC transporter, permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0323 | SACTRNSFRASE | 38 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0331 | ISCHRISMTASE | 58 | 1e-10 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0333 | ENTSNTHTASED | 97 | 2e-26 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0335 | cloacin | 34 | 0.002 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0337 | BLACTAMASEA | 34 | 0.001 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| 9 | CMM_0459 | CMM_0464 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0459 | 2 | 9 | 1.454411 | hypothetical protein | |
| CMM_0460 | 2 | 9 | 1.555826 | putative membrane protein | |
| CMM_0461 | 2 | 15 | 1.853770 | putative ATP-dependent DNA helicase | |
| CMM_0462 | 1 | 12 | 3.060065 | putative adenine-specific DNA-modification | |
| CMM_0463 | 4 | 12 | 2.933008 | putative membrane protein | |
| CMM_0464 | 3 | 12 | 1.863550 | putative membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0463 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0464 | NUCEPIMERASE | 58 | 9e-12 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 10 | CMM_0472 | CMM_0480 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0472 | 2 | 9 | 3.136072 | putative acetyltransferase | |
| CMM_0473 | 2 | 10 | 2.228085 | conserved hypothetical protein | |
| CMM_0474 | 4 | 9 | 2.233440 | putative serine protease, family S53 | |
| CMM_0476 | 4 | 12 | 2.774113 | transcriptional regulator, TetR family | |
| CMM_0477 | 5 | 11 | 3.625103 | putative phospholipase C | |
| CMM_0478 | 4 | 9 | 3.439727 | DNA repair system specific for alkylated DNA | |
| CMM_0479 | 3 | 9 | 2.905397 | putative membrane protein | |
| CMM_0480 | 2 | 8 | 2.918625 | putative lipoate-protein ligase A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0473 | HTHFIS | 79 | 7e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0474 | BACINVASINB | 31 | 0.002 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0477 | FLGMOTORFLIN | 29 | 0.007 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| 11 | CMM_0497 | CMM_0504 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0497 | 2 | 8 | 3.060907 | putative metal-dependent hydrolase | |
| CMM_0498 | 2 | 8 | 3.513167 | hypothetical protein | |
| CMM_0499 | 3 | 7 | 3.042246 | putative oxidoreductase | |
| CMM_0500 | 3 | 6 | 3.079017 | putative 1-acylglycerol-3-phosphate | |
| CMM_0501 | 3 | 6 | 2.763318 | putative tRNA processing ribonuclease BN | |
| CMM_0502 | 1 | 7 | 1.076331 | Deoxyribodipyrimidine photo-lyase | |
| CMM_0503 | 1 | 9 | -0.107933 | putative glycosyl transferase | |
| CMM_0504 | 2 | 9 | -0.404904 | transcriptional regulator, MarR family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0500 | SACTRNSFRASE | 32 | 5e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0501 | PF05616 | 41 | 3e-05 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0502 | SUBTILISIN | 48 | 6e-08 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0503 | HTHTETR | 50 | 1e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 12 | CMM_0569 | CMM_0574 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0569 | 2 | 12 | -3.050161 | conserved hypothetical protein | |
| CMM_0570 | 2 | 19 | -4.271942 | putative aldose-1-epimerase | |
| CMM_0571 | 3 | 18 | -4.182880 | putative glyoxylase family protein | |
| CMM_0572 | 3 | 19 | -2.772365 | putative transcription regulator, MarR family | |
| CMM_0573 | 2 | 18 | -2.230934 | hypothetical protein | |
| CMM_0574 | 2 | 20 | -2.549857 | putative levanase/invertase |
| 13 | CMM_0606 | CMM_0627 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0606 | 2 | 8 | 0.631554 | putative membrane protein | |
| CMM_0607 | 2 | 7 | 1.592790 | putative transcriptional regulator, TetR family | |
| CMM_0608 | 3 | 10 | 1.744472 | putative efflux MFS permease | |
| CMM_0609 | 2 | 6 | 0.905390 | putative membrane protein | |
| CMM_0610 | 0 | 6 | 1.721696 | putative monooxygenase | |
| CMM_0611 | 1 | 7 | 1.886389 | putative monooxygenase | |
| CMM_0612 | 2 | 8 | 2.375433 | putative Zn-dependant quinone oxidoreductase | |
| CMM_0613 | 2 | 9 | 2.323393 | putative serine O-acetyltransferase | |
| CMM_0614 | -2 | 9 | 1.266566 | putative RNA methyltransferase | |
| CMM_0615 | -1 | 9 | 2.195914 | conserved hypothetical protein | |
| CMM_0616 | 0 | 8 | 2.020381 | hypothetical protein | |
| CMM_0617 | 0 | 9 | 2.405892 | putative endoribonuclease L-PSP | |
| CMM_0618 | 0 | 10 | 1.985682 | putative adenosine deaminase | |
| CMM_0619 | -2 | 8 | 2.508572 | hypothetical protein | |
| CMM_0620 | 0 | 8 | 3.841812 | conserved hypothetical protein | |
| CMM_0621 | 0 | 8 | 3.563458 | NADP-dependent alcohol dehydrogenase | |
| CMM_0622 | -1 | 7 | 3.084366 | putative carboxylesterase, type B | |
| CMM_0623 | 6 | 26 | -5.013327 | putative flavin-dependant reductase | |
| CMM_0624 | 7 | 28 | -5.637021 | putative secreted phosphoesterase | |
| CMM_0625 | 9 | 40 | -9.672422 | conserved hypothetical protein, putative | |
| CMM_0626 | 8 | 36 | -8.832663 | hypothetical protein | |
| CMM_PS_14 | 9 | 36 | -8.668717 | hypothetical protein | |
| CMM_0627 | 8 | 35 | -8.314419 | conserved membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0627 | BINARYTOXINB | 40 | 1e-04 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| 14 | CMM_0651 | CMM_0681 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0651 | 2 | 11 | 1.770105 | putative hydrolase | |
| CMM_0652 | 2 | 10 | 0.311849 | putative transcriptional regulator, Cro/CI | |
| CMM_0653 | 3 | 12 | 0.113289 | hypothetical protein | |
| CMM_0654 | 2 | 11 | 0.730939 | two component system, sensor kinase | |
| CMM_0655 | 2 | 9 | 0.557514 | putative two-component system response | |
| CMM_0656 | 3 | 11 | 0.700994 | hypothetical protein | |
| CMM_0657 | 10 | 52 | -10.724400 | putative acetyltransferase | |
| CMM_0658 | 8 | 45 | -10.461381 | hypothetical protein | |
| CMM_0659 | 9 | 40 | -8.513563 | hypothetical protein | |
| CMM_0660 | 11 | 43 | -8.958252 | conserved hypothetical protein | |
| CMM_PS_15 | 10 | 43 | -9.179269 | putative beta lactamase/penicillin-binding | |
| CMM_0661 | 10 | 42 | -8.884660 | putative two-component system, sensor kinase | |
| CMM_0662 | -2 | 7 | 0.581764 | putative two-component system response | |
| CMM_0663 | -1 | 9 | 1.758357 | stress-induced protein, putative organic | |
| CMM_0664 | -2 | 9 | 0.627075 | conserved hypothetical protein | |
| CMM_0665 | -1 | 8 | 0.936258 | conserved hypothetical protein | |
| CMM_0666 | -2 | 10 | 1.506633 | conserved hypothetical protein | |
| CMM_0667 | -2 | 10 | 1.771962 | hypothetical protein | |
| CMM_0668 | 2 | 10 | 3.011217 | conserved membrane protein, putative | |
| CMM_0669 | 2 | 9 | 3.141603 | putative pyruvyl-transferase | |
| CMM_0670 | 1 | 9 | 3.062527 | putative membrane protein, possibly a | |
| CMM_0671 | 3 | 7 | 4.243251 | putative mannosyltransferase | |
| CMM_0672 | 3 | 9 | 4.804619 | putative glycosyltransferase | |
| CMM_0673 | 1 | 10 | 3.758344 | putative undecaprenyl-phosphate sugar | |
| CMM_0675 | -1 | 11 | 2.861892 | putative protein tyrosine kinase | |
| CMM_0676 | 0 | 12 | 2.650573 | putative acyltransferase | |
| CMM_0677 | 1 | 13 | 1.824650 | putative membrane-bound acyltransferase | |
| CMM_0678 | 2 | 13 | 1.597466 | putative esterase | |
| CMM_0679 | 2 | 13 | 1.487021 | conserved hypothetical protein | |
| CMM_0680 | 2 | 12 | 1.644403 | putative hydrolase | |
| CMM_0681 | 2 | 16 | 1.466849 | phosphoribosylformylglycinamidine synthase II |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0671 | ABC2TRNSPORT | 39 | 3e-05 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0673 | HTHTETR | 50 | 2e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0674 | RTXTOXINA | 30 | 0.036 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0678 | YERSSTKINASE | 30 | 0.032 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 15 | CMM_0694 | CMM_0705 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0694 | 3 | 9 | 1.767859 | putative integral membrane protein | |
| CMM_0695 | 3 | 9 | 1.712742 | conserved hypothetical protein | |
| CMM_0696 | 0 | 10 | 3.081498 | conserved membrane protein | |
| CMM_0697 | 0 | 10 | 3.226598 | putative membrane protein | |
| CMM_0698 | 0 | 9 | 3.129479 | putative phosphoribulokinase | |
| CMM_0699 | 0 | 9 | 3.982482 | putative dioxygenase | |
| CMM_0700 | -1 | 10 | 3.530898 | putative monooxygenase | |
| CMM_0701 | -1 | 10 | 3.730646 | putative transcriptional regulator, MarR family | |
| CMM_0702 | -1 | 11 | 3.912042 | putative glycosyl transferase | |
| CMM_0703 | 0 | 10 | 3.541182 | conserved hypothetical protein, acyl-CoA | |
| CMM_0704 | -1 | 11 | 3.426272 | hypothetical protein | |
| CMM_0705 | -1 | 11 | 3.191398 | phosphoribosylaminoimidazolesuccinocarboxyamide |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0700 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0701 | GPOSANCHOR | 33 | 0.001 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 16 | CMM_0733 | CMM_0751 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0733 | 8 | 28 | -7.147860 | putative oxidoreductase | |
| CMM_0734 | 8 | 29 | -7.352875 | putative transcriptional regulator, Cro/CI | |
| CMM_0735 | 8 | 31 | -7.832208 | hypothetical membrane protein | |
| CMM_0736 | 8 | 30 | -7.910632 | putative transcriptional regulator, GntR family | |
| CMM_0737 | 8 | 28 | -7.383063 | putative triosephosphate isomerase | |
| CMM_0738 | 8 | 33 | -7.019345 | putative ribose 5-phosphate isomerase | |
| CMM_0739 | -1 | 9 | 0.565926 | putative dihydroxyacetone kinase | |
| CMM_0740 | -1 | 10 | 0.714324 | putative transcriptional regulator, GntR-family | |
| CMM_0741 | 0 | 10 | 0.655883 | putative sugar ABC transporter ATP-binding | |
| CMM_0742 | 0 | 11 | 1.764098 | putative sugar ABC transporter, permease | |
| CMM_0743 | 1 | 10 | 1.687688 | putative sugar ABC transporter, solute-binding | |
| CMM_0744 | 1 | 11 | 1.552380 | putative myo-inositol dehydrogenase | |
| CMM_0745 | 1 | 11 | 3.101307 | putative sugar epimerase | |
| CMM_0746 | 2 | 10 | 4.240883 | putative extracellular nuclease/phosphatase | |
| CMM_0747 | 2 | 9 | 4.317629 | putative thioredoxin | |
| CMM_0748 | 0 | 11 | 3.855500 | putative ATP-dependent DNA helicase | |
| CMM_0749 | 0 | 11 | 3.604451 | conserved hypothetical protein | |
| CMM_0750 | 0 | 9 | 3.685821 | putative oligopeptide ABC transporter, | |
| CMM_0751 | -1 | 9 | 3.326568 | putative oligopeptide ABC transporter, permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0739 | SACTRNSFRASE | 41 | 4e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0747 | PRTACTNFAMLY | 28 | 0.038 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
| 17 | CMM_0800 | CMM_0808 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0800 | 2 | 11 | 0.251873 | conserved hypothetical protein | |
| CMM_0801 | 1 | 10 | 0.711027 | pantoate--beta-alanine ligase | |
| CMM_0802 | 1 | 10 | 1.911034 | hypothetical protein | |
| CMM_0803 | 1 | 10 | 2.667105 | hypothetical protein | |
| CMM_0804 | 1 | 9 | 4.076012 | ATP-dependent protease, ATPase subunit | |
| CMM_0805 | 0 | 8 | 3.792932 | putative UDP-glucose 4-epimerase | |
| CMM_0806 | 0 | 7 | 3.150811 | putative oxidoreductase | |
| CMM_0807 | 1 | 7 | 3.923455 | 50S ribosomal protein L10 | |
| CMM_0808 | -2 | 7 | 3.029032 | 50S ribosomal protein L7/L12 |
| 18 | CMM_0819 | CMM_0825 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0819 | 2 | 8 | 1.549094 | putative cystathionine beta-synthase | |
| CMM_0820 | 5 | 9 | 0.448183 | Ribonuclease H | |
| CMM_0821 | 4 | 9 | 0.119352 | putative transcriptional regulator, LacI-family | |
| CMM_0822 | 4 | 9 | 0.255129 | putative L-ribulokinase | |
| CMM_0823 | 5 | 7 | -0.918476 | putative L-ribulose-5-phosphate 4-epimerase | |
| CMM_0824 | 6 | 7 | -0.781680 | putative L-arabinose isomerase | |
| CMM_0825 | 5 | 7 | -0.566477 | putative sugar ABC transporter, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0819 | PF03544 | 35 | 9e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0820 | PF03544 | 37 | 2e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0825 | MICOLLPTASE | 101 | 2e-23 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| 19 | CMM_0845 | CMM_0880 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0845 | 4 | 10 | 3.889194 | putative malate:quinone oxidoreductase | |
| CMM_0846 | 3 | 9 | 3.654074 | conserved hypothetical protein | |
| CMM_0847 | 3 | 8 | 3.379480 | putative two-component system, response | |
| CMM_0848 | 3 | 9 | 3.096482 | putative tyrosine-protein kinase | |
| CMM_0849 | 0 | 12 | 1.800240 | hypothetical protein | |
| CMM_0850 | 0 | 14 | 1.468189 | hypothetical protein | |
| CMM_0851 | 0 | 14 | 1.172218 | hypothetical protein | |
| CMM_0852 | 0 | 15 | -1.924232 | hypothetical protein | |
| CMM_0853 | 0 | 14 | -2.827011 | conserved membrane protein | |
| CMM_0854 | 1 | 11 | -3.377672 | putative flavin-dependent | |
| CMM_0855 | 2 | 10 | -4.252335 | putative penicillin-binding protein | |
| CMM_0856 | 4 | 10 | -4.195742 | putative acyltransferase | |
| CMM_0857 | 2 | 7 | -2.429192 | putative membrane protein | |
| CMM_0858 | -1 | 7 | -0.606744 | *putative phosphohydrolase | |
| CMM_0859 | 0 | 6 | 0.100548 | putative penicillin-binding protein | |
| CMM_0860 | 0 | 7 | 0.488373 | conserved hypothetical protein | |
| CMM_0861 | -1 | 7 | -0.009923 | putative endoribonuclease, putative translation | |
| CMM_0862 | -1 | 7 | -0.953656 | acetyl-coenzyme A synthetase | |
| CMM_0863 | 0 | 9 | -2.574591 | conserved hypothetical protein | |
| CMM_0864 | 0 | 10 | -2.710871 | conserved membrane protein | |
| CMM_0865 | -1 | 11 | -3.096559 | hypothetical protein | |
| CMM_0866 | -1 | 12 | -3.506640 | hypothetical protein | |
| CMM_0867 | -1 | 10 | -3.075092 | hypothetical protein | |
| CMM_0868 | -3 | 10 | -2.051996 | DNA topoisomerase I | |
| CMM_0869 | -3 | 8 | -1.372191 | DNA polymerase III, delta' subunit | |
| CMM_0870 | -2 | 9 | -0.977123 | *D-alanyl-D-alanine carboxypeptidase | |
| CMM_0871 | -1 | 11 | -0.880627 | putative pyrazinamidase / nicotinamidase | |
| CMM_0872 | -1 | 11 | -0.839933 | putative succinate-semialdehyde dehydrogenase | |
| CMM_0873 | -2 | 12 | -0.987041 | putative tRNA/rRNA methyltransferase | |
| CMM_0874 | -1 | 14 | -1.773328 | hypothetical protein | |
| CMM_0875 | -1 | 15 | -3.175273 | hypothetical protein | |
| CMM_0876 | 0 | 15 | -4.125123 | putative multidrug export ABC transporter, fused | |
| CMM_0877 | 1 | 14 | -4.849069 | putative multidrug export ABC transporter, | |
| CMM_0878 | 0 | 11 | -4.158922 | putative multidrug export ABC | |
| CMM_0879 | -1 | 9 | -3.765459 | putative multidrug export ABC | |
| CMM_0880 | -1 | 7 | -3.242677 | Putative MFS-type efflux transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0849 | RTXTOXINA | 32 | 8e-04 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0857 | HTHFIS | 37 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0858 | NUCEPIMERASE | 99 | 4e-26 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0864 | TCRTETA | 63 | 7e-13 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 20 | CMM_0889 | CMM_0897 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0889 | 2 | 9 | 2.201587 | putative membrane protein | |
| CMM_0890 | 2 | 6 | 2.035718 | putative MFS permease | |
| CMM_0891 | 1 | 6 | 1.582859 | putative MFS permease | |
| CMM_0892 | 4 | 11 | 0.656388 | hypothetical protein | |
| CMM_0893 | 3 | 11 | 0.446843 | putative peptide ABC transporter, permease | |
| CMM_0894 | 3 | 12 | -0.267793 | putative peptide ABC transporter, | |
| CMM_0895 | 1 | 11 | 0.432258 | putative MFS permease | |
| CMM_0896 | 1 | 12 | 0.546305 | putative peptide ABC transporter, ATP-binding | |
| CMM_0897 | 2 | 12 | 0.267209 | putative peptide ABC transporter, ATP-binding |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0889 | TCRTETA | 58 | 2e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0894 | NUCEPIMERASE | 32 | 0.001 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0896 | ACETATEKNASE | 492 | e-177 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0897 | ICENUCLEATIN | 128 | 1e-31 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| 21 | CMM_0953 | CMM_0959 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0953 | 1 | 7 | 3.636389 | putative glutaryl-CoA dehydrogenase | |
| CMM_0954 | 3 | 8 | 5.286673 | putative mannose-6-phosphate isomerase | |
| CMM_0955 | 3 | 8 | 5.181634 | transcriptional regulator, whiB homolog | |
| CMM_0956 | 0 | 7 | 3.838372 | putative glycosyl transferase | |
| CMM_0957 | 1 | 9 | 3.506386 | putative secreted protein | |
| CMM_0958 | 5 | 10 | 3.605773 | conserved hypothetical protein | |
| CMM_0959 | 3 | 10 | 3.241302 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0957 | TCRTETA | 42 | 4e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 22 | CMM_1017 | CMM_1031 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1017 | 2 | 9 | -0.977885 | putative multisubunit Na+/H+ antiporter, | |
| CMM_1018 | 3 | 10 | -1.372006 | putative multisubunit Na+/H+ antiporter, | |
| CMM_1019 | 3 | 8 | -1.526548 | dihydroxy-acid dehydratase | |
| CMM_1020 | 3 | 7 | -1.194488 | putative acetolactate synthase large subunit | |
| CMM_1021 | 2 | 7 | -0.555929 | putative acetolactate synthase, small | |
| CMM_1022 | 2 | 7 | 0.240663 | putative membrane protein | |
| CMM_1023 | -1 | 7 | 0.300940 | putative membrane protein | |
| CMM_1024 | -2 | 7 | 0.511217 | conserved membrane protein | |
| CMM_1025 | -2 | 8 | 2.049679 | D-3-phosphoglycerate dehydrogenase | |
| CMM_1026 | 0 | 9 | 2.768624 | putative transcriptional regulator, TetR family | |
| CMM_1027 | 2 | 7 | 3.289434 | putative efflux MFS permease | |
| CMM_1028 | 2 | 10 | 3.346466 | hypothetical membrane protein | |
| CMM_1029 | 1 | 10 | 3.065627 | 3-isopropylmalate dehydrogenase | |
| CMM_1030 | 1 | 9 | 3.117304 | branched-chain amino acid aminotransferase | |
| CMM_1031 | 2 | 12 | 1.700485 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1028 | NUCEPIMERASE | 138 | 2e-40 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 23 | CMM_1055 | CMM_1060 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1055 | 2 | 12 | -0.056254 | putative short chain alcohol dehydrogenase | |
| CMM_1056 | 3 | 13 | 0.210291 | hypothetical protein | |
| CMM_1057 | 3 | 10 | -0.218396 | putative pyridine nucleotide-disulphide | |
| CMM_1058 | 2 | 9 | -1.093721 | putative enoyl-CoA hydratase | |
| CMM_1059 | 2 | 10 | -1.999835 | putative F420-dependent NADP reductase | |
| CMM_1060 | 2 | 16 | -1.106053 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1055 | INTIMIN | 27 | 0.045 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1059 | PF06580 | 52 | 3e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 24 | CMM_1105 | CMM_1111 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1105 | 3 | 21 | -6.144026 | putative Mg2+ transporter, MgtE family | |
| CMM_1106 | 4 | 26 | -6.868462 | conserved membrane protein | |
| CMM_1107 | 4 | 26 | -7.218359 | putative Xaa-Pro aminopeptidase | |
| CMM_1108 | 4 | 24 | -8.037266 | putative membrane protein with hydrolase | |
| CMM_1109 | 5 | 28 | -8.562334 | conserved hypothetical protein | |
| CMM_1110 | 4 | 29 | -8.475603 | putative ATP-dependent RNA helicase | |
| CMM_1111 | 0 | 8 | -3.241403 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1109 | ACETATEKNASE | 29 | 0.032 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| 25 | CMM_1161 | CMM_1174 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1161 | 2 | 12 | -3.462324 | putative sugar ABC transporter, ATP-binding | |
| CMM_1162 | 2 | 11 | -4.265755 | putative sugar ABC transporter, permease | |
| CMM_1163 | 1 | 9 | -4.428542 | hypothetical protein | |
| CMM_1164 | 0 | 10 | -4.063175 | putative signal peptidase I | |
| CMM_1165 | 0 | 10 | -3.916643 | hypothetical protein | |
| CMM_1166 | 0 | 8 | -3.508037 | hypothetical secreted protein | |
| CMM_1167 | -1 | 8 | -3.574919 | hypothetical secreted protein | |
| CMM_1168 | -2 | 8 | -2.309295 | putative two-component system, sensor histidine | |
| CMM_1169 | -1 | 7 | -1.609995 | putative choline/glycine/betaine | |
| CMM_1170 | 4 | 10 | 2.417501 | putative diacylglycerol kinase | |
| CMM_1171 | 3 | 11 | 2.634743 | putative ATPase | |
| CMM_1172 | 4 | 11 | 2.561152 | putative fatty acid desaturase | |
| CMM_1173 | 3 | 10 | 2.523052 | putative Zn-dependent alcohol dehydrogenase | |
| CMM_1174 | 2 | 9 | 2.152190 | putative membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1165 | FLGMRINGFLIF | 30 | 0.006 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1172 | RTXTOXINA | 33 | 0.001 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| 26 | CMM_1210 | CMM_1229 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1210 | 4 | 10 | 2.227149 | ribonuclease PH (tRNA nucleotidyltransferase) | |
| CMM_1211 | 4 | 9 | 2.005902 | putative xanthosine triphosphate | |
| CMM_1212 | 5 | 9 | 1.975028 | putative cobalt-zinc-cadmium efflux permease,CDF | |
| CMM_1213 | 5 | 9 | 2.026674 | conserved membrane protein | |
| CMM_1214 | 5 | 8 | 2.938533 | *putative xylulose kinase | |
| CMM_1215 | 5 | 8 | 3.244028 | putative ATPase, type II/type IV pathway | |
| CMM_1216 | 5 | 12 | 3.797269 | conserved membrane protein, putative pilus | |
| CMM_1217 | 4 | 13 | 4.067684 | conserved membrane protein, putative pilus | |
| CMM_1218 | 4 | 12 | 4.072564 | conserved membrane protein | |
| CMM_1219 | 3 | 14 | 3.977517 | conserved secreted protein | |
| CMM_1220 | 0 | 10 | 2.123299 | conserved hypothetical protein | |
| CMM_1221 | 1 | 8 | 1.767550 | putative secreted protein | |
| CMM_1222 | 1 | 8 | 2.327944 | putative MFS permease | |
| CMM_1223 | 1 | 8 | 1.711133 | peptide chain release factor RF-2 | |
| CMM_1224 | 3 | 8 | 2.617406 | putative ABC transporter, ATP-binding protein | |
| CMM_1225 | 3 | 9 | 2.952976 | putative ABC transporter, permease | |
| CMM_1226 | 6 | 9 | 4.846300 | tmRNA (SsrA)-binding protein | |
| CMM_1227 | 4 | 8 | 4.274254 | putative iron ABC transporter, permease | |
| CMM_1228 | 4 | 9 | 3.288995 | putative iron ABC transporter, ATPase component | |
| CMM_1229 | 1 | 8 | 3.348352 | putative iron ABC transporter, substrate-binding |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1215 | PF05616 | 48 | 2e-07 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1219 | HTHTETR | 40 | 2e-06 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1222 | RTXTOXINA | 32 | 0.003 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1229 | SECGEXPORT | 30 | 0.008 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| 27 | CMM_1347 | CMM_1359 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1347 | 3 | 9 | 3.442475 | *NH3-dependent NAD+ synthetase | |
| CMM_1348 | 2 | 7 | 3.854518 | hypothetical protein | |
| CMM_1349 | 2 | 7 | 3.506386 | hypothetical protein | |
| CMM_1350 | 2 | 8 | 3.091464 | putative peptide methionine sulfoxide reductase | |
| CMM_1351 | 1 | 6 | 2.354661 | hypothetical protein | |
| CMM_1352 | 1 | 6 | 2.496159 | hypothetical protein | |
| CMM_1353 | 2 | 7 | 1.857658 | putative transcriptional regulator, MarR-family | |
| CMM_1354 | 0 | 8 | 0.287951 | putative secreted protein | |
| CMM_1355 | -3 | 11 | -0.216325 | putative ABC transporter, ATP-binding protein | |
| CMM_1356 | 2 | 6 | 1.455776 | putative thioesterase | |
| CMM_1357 | 2 | 7 | 1.573257 | putative acyl-CoA thioesterase II | |
| CMM_1358 | 2 | 8 | 1.086084 | conserved hypothetical protein | |
| CMM_1359 | 2 | 8 | 1.115594 | hemoglobin-like protein, truncated hemoglobin |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1351 | HTHFIS | 37 | 9e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1353 | PF05616 | 31 | 0.025 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1355 | LPSBIOSNTHSS | 165 | 3e-55 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 28 | CMM_1433 | CMM_1438 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1433 | 3 | 12 | 3.375202 | putative monooxygenase | |
| CMM_1434 | 5 | 11 | 3.334298 | putative polyprenyltransferase | |
| CMM_1435 | 5 | 10 | 2.707749 | putative acetyltransferase | |
| CMM_1436 | 3 | 9 | 0.368615 | putative N-acetyltransferase | |
| CMM_1437 | 3 | 9 | -0.255363 | hypothetical protein | |
| CMM_1438 | 2 | 8 | -2.186278 | cytochrome bd-type menaquinol oxidase subunit I |
| 29 | CMM_1832 | CMM_1840 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1832 | 1 | 7 | -3.320355 | putative GTP-binding protein | |
| CMM_1833 | 0 | 10 | -3.194655 | putative cytidylate kinase | |
| CMM_1834 | 1 | 14 | -3.476004 | putative prephenate dehydrogenase | |
| CMM_1835 | 0 | 15 | -3.043559 | putative pseudouridine synthase | |
| CMM_1836 | -1 | 16 | -3.095321 | conserved hypothetical protein, putative | |
| CMM_1837 | 1 | 14 | -4.174544 | conserved hypothetical protein | |
| CMM_1838 | 2 | 14 | -3.997878 | putative ATPase involved in partitioning | |
| CMM_PS_17 | 2 | 12 | -5.083250 | integrase/recombinase | |
| CMM_1839 | 1 | 8 | -4.418945 | putative NTP pyrophosphatase | |
| CMM_1840 | 1 | 8 | -3.863553 | putative CTP synthase |
| 30 | CMM_1895 | CMM_1917 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1895 | 1 | 8 | 3.173161 | conserved hypothetical protein | |
| CMM_1896 | 0 | 8 | 3.851789 | putative 2-oxoglutarate/malate translocator,DASS | |
| CMM_1897 | -1 | 6 | 3.923784 | putative ATP-dependent DNA helicase | |
| CMM_1898 | -2 | 8 | 3.540407 | putative membrane protein | |
| CMM_1899 | -2 | 8 | 3.458508 | 5-methyltetrahydropteroyltriglutamate- | |
| CMM_1900 | 0 | 7 | 3.457534 | adenine phosphoribosyltransferase | |
| CMM_1901 | 1 | 7 | 3.597782 | putative membrane protein | |
| CMM_1902 | 1 | 8 | 3.386949 | putative 2,5-diketo-D-gluconic acid reductase | |
| CMM_1903 | 0 | 8 | 3.336986 | putative lipoprotein signal peptidase | |
| CMM_1904 | -2 | 8 | 1.189501 | hypothetical protein | |
| CMM_1905 | -1 | 11 | 1.358775 | putative cysteine peptidase, family C56 | |
| CMM_1906 | -2 | 7 | 2.025390 | conserved hypothetical protein | |
| CMM_1907 | -2 | 6 | 2.080320 | putative DNA-binding ferritin-like protein | |
| CMM_1908 | -2 | 6 | 2.416991 | short chain dehydrogenase/oxidoreductase | |
| CMM_1909 | -2 | 6 | 2.314591 | hypothetical protein | |
| CMM_1910 | 0 | 7 | 3.385374 | putative two-component system sensor kinase | |
| CMM_1911 | 1 | 10 | 3.398861 | putative two-component system response | |
| CMM_1912 | 0 | 9 | 2.964869 | D-alanyl-D-alanine carboxypeptidase | |
| CMM_1913 | 2 | 7 | 3.151582 | putative DNA-invertase/recombinase | |
| CMM_1914 | 4 | 8 | 2.772052 | hypothetical protein | |
| CMM_1915 | 4 | 9 | 2.885223 | conserved membrane protein | |
| CMM_1916 | 3 | 9 | 2.080355 | putative FAD/FMN-containing dehydrogenase | |
| CMM_1917 | 2 | 8 | 1.962464 | putative DNA glycosylase |
| 31 | CMM_1953 | CMM_1971 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1953 | 2 | 8 | 3.645275 | hypothetical protein | |
| CMM_1954 | 0 | 8 | 3.037570 | putative sugar ABC transporter, binding protein | |
| CMM_1955 | -1 | 8 | 1.924468 | putative sugar ABC transporter, permease | |
| CMM_1956 | -1 | 9 | 1.568128 | putative sugar ABC transporter, permease | |
| CMM_1957 | -1 | 12 | 0.701241 | beta-galactosidase | |
| CMM_1958 | 0 | 12 | -0.004436 | putative sugar alcohol dehydrogenase | |
| CMM_1959 | -1 | 12 | -0.298854 | putative glutaredoxin | |
| CMM_1960 | -2 | 12 | -0.350852 | conserved hypothetical protein, putative | |
| CMM_1961 | 1 | 15 | 0.519721 | hypothetical membrane protein | |
| CMM_1962 | 3 | 16 | -0.000211 | putative protease II (Oligopeptidase B) | |
| CMM_1963 | 2 | 11 | 2.155935 | thiamine-phosphate | |
| CMM_1964 | 1 | 11 | 2.333331 | conserved hypothetical protein, putative fusion | |
| CMM_1965 | 1 | 13 | 2.418441 | putative sugar MFS permease | |
| CMM_1966 | -1 | 21 | -0.992622 | hypothetical membrane protein | |
| CMM_1967 | 0 | 23 | -1.642010 | putative DNA helicase | |
| CMM_1968 | 0 | 19 | -1.243299 | putative glutathione S-transferase | |
| CMM_1969 | 1 | 21 | -4.164471 | putative esterase | |
| CMM_1970 | 0 | 20 | -5.470635 | putative membrane protein | |
| CMM_1971 | 0 | 17 | -4.202869 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1958 | CHANLCOLICIN | 30 | 0.013 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1961 | SACTRNSFRASE | 31 | 0.001 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1965 | HTHFIS | 50 | 2e-09 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1969 | PF02370 | 36 | 8e-05 | M protein repeat | |
>PF02370#M protein repeat | |||||
| 32 | CMM_2004 | CMM_2012 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2004 | -1 | 10 | -3.118920 | hypothetical protein | |
| CMM_2005 | 0 | 11 | -3.462116 | putative 1-deoxy-D-xylulose 5-phosphate | |
| CMM_2006 | 3 | 14 | -3.713655 | putative peptidylprolyl isomerase | |
| CMM_2007 | 4 | 16 | -2.750780 | conserved hypothetical protein | |
| CMM_2008 | 2 | 11 | -0.931812 | putative 4-aminobutyrate aminotransferase | |
| CMM_2009 | 2 | 13 | -0.843364 | putative asparaginase II | |
| CMM_2010 | 1 | 13 | -0.267685 | conserved hypothetical protein | |
| CMM_2011 | -1 | 11 | -0.250687 | conserved membrane protein containing | |
| CMM_2012 | 2 | 10 | 1.069510 | conserved hypothetical protein |
| 33 | CMM_2160 | CMM_2169 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2160 | 0 | 6 | 3.032660 | hypothetical protein | |
| CMM_2161 | 0 | 7 | 4.223612 | putative permease | |
| CMM_2162 | 2 | 7 | 4.833984 | conserved membrane protein | |
| CMM_2163 | 1 | 8 | 4.730765 | hypothetical protein | |
| CMM_2164 | 4 | 8 | 4.880717 | conserved hypothetical protein | |
| CMM_2165 | 4 | 8 | 5.017666 | hypothetical protein | |
| CMM_2166 | 3 | 8 | 3.678385 | hypothetical protein | |
| CMM_2167 | 3 | 9 | 3.070172 | putative membrane-bound oxidoreductase | |
| CMM_2168 | 3 | 10 | 2.537155 | putative two-component system sensor kinase | |
| CMM_2169 | 3 | 10 | 2.780319 | putative two-component system response |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2161 | INFPOTNTIATR | 62 | 2e-13 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2168 | HTHFIS | 35 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 34 | CMM_2199 | CMM_2222 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2199 | 2 | 8 | 2.206409 | conserved hypothetical protein | |
| CMM_2200 | 2 | 7 | 2.312420 | putative | |
| CMM_2201 | 1 | 8 | 2.691169 | putative dimethyladenosine transferase | |
| CMM_2202 | 2 | 9 | 3.069831 | putative citrate synthase | |
| CMM_2203 | 2 | 8 | 2.960337 | putative dihydrolipoamide dehydrogenase (E3) | |
| CMM_2204 | 1 | 9 | 2.748194 | putative NAD(P)H oxidoreductase | |
| CMM_2205 | 0 | 17 | 0.831217 | putative Zn-dependant alcohol dehydrogenase | |
| CMM_2206 | -1 | 21 | -1.011092 | putative transcriptional regulator, TetR family | |
| CMM_2207 | -1 | 16 | -3.726878 | putative membrane protein | |
| CMM_2208 | 0 | 15 | -4.246492 | putative SAM-dependent methyltransferase | |
| CMM_2209 | -1 | 19 | -4.815293 | putative phosphatase | |
| CMM_2210 | 1 | 22 | -5.428705 | putative methylisocitrate lyase/phosphonomutase | |
| CMM_2211 | 0 | 18 | -4.545680 | putative 2-methylcitrate dehydratase | |
| CMM_2212 | 0 | 10 | -3.928683 | putative duplicated acetyltransferase | |
| CMM_2213 | 0 | 13 | -2.681504 | hypothetical protein, putative perforin | |
| CMM_2214 | 0 | 11 | -3.134867 | conserved hypothetical protein | |
| CMM_2215 | 1 | 10 | -2.337535 | putative sugar acetyltransferase | |
| CMM_2216 | 3 | 16 | -4.544805 | putative transcriptional regulator, TetR family | |
| CMM_2217 | 6 | 22 | -6.221109 | putative membrane-bound tyrosin-protein | |
| CMM_2218 | 5 | 24 | -6.675544 | hypothetical secreted protein | |
| CMM_2219 | 6 | 24 | -6.923388 | conserved membrane protein | |
| CMM_2220 | 6 | 20 | -5.252379 | putative permease, DMT family | |
| CMM_2221 | 6 | 19 | -5.907405 | conserved hypothetical protein | |
| CMM_2222 | 3 | 12 | -2.971205 | putative methyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2204 | PF06776 | 30 | 0.036 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2207 | PREPILNPTASE | 28 | 0.027 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2221 | TCRTETOQM | 29 | 0.022 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 35 | CMM_2276 | CMM_2303 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2276 | 2 | 8 | 1.556876 | putative acetyltransferase | |
| CMM_2277 | 0 | 8 | 1.258959 | putative UTP-glucose-1-phosphate | |
| CMM_2278 | -2 | 8 | 0.365068 | putative 5-formyltetrahydrofolate cyclo-ligase | |
| CMM_2279 | -1 | 7 | 1.164887 | conserved hypothetical protein | |
| CMM_2280 | -3 | 6 | -0.522548 | putative large-conductance mechanosensitive | |
| CMM_2281 | 1 | 16 | -4.256356 | conserved hypothetical protein | |
| CMM_2282 | 3 | 22 | -6.479801 | *putative transcriptional regulator, Cro/CI | |
| CMM_2283 | 4 | 29 | -7.951455 | conserved hypothetical protein | |
| CMM_2284 | 6 | 34 | -9.582974 | conserved hypothetical protein, putative | |
| CMM_2285 | 7 | 39 | -11.531348 | putative cytosine/purine permease, NCS1 family | |
| CMM_2286 | 8 | 51 | -13.853978 | putative hydantoinase | |
| CMM_2287 | 9 | 53 | -14.265283 | conserved hypothetical protein | |
| CMM_2288 | 9 | 54 | -13.952479 | conserved hypothetical protein | |
| CMM_2289 | 10 | 52 | -13.518571 | putative ATPase | |
| CMM_2290 | 12 | 57 | -13.584579 | conserved hypothetical protein | |
| CMM_2291 | 11 | 56 | -13.136370 | conserved hypothetical protein, putative | |
| CMM_2292 | 11 | 57 | -13.956868 | hypothetical protein | |
| CMM_2293 | 11 | 50 | -13.169188 | putative transcriptional activator | |
| CMM_2294 | 10 | 49 | -13.679259 | putative serine protease, family S9A | |
| CMM_2295 | 9 | 50 | -13.961174 | putative restriction endonuclease | |
| CMM_2296 | 8 | 45 | -13.158507 | putative secreted hydrolase | |
| CMM_2297 | 7 | 47 | -14.430156 | putative iron-dependent repressor | |
| CMM_2298 | 8 | 44 | -14.411062 | conserved hypothetical protein | |
| CMM_2299 | 10 | 44 | -13.531201 | putative cold shock protein | |
| CMM_2300 | 8 | 38 | -11.423742 | hypothetical membrane protein | |
| CMM_2301 | 5 | 20 | -6.100939 | putative ATP-dependent DNA helicase | |
| CMM_2302 | 5 | 21 | -6.043967 | putative two component system response | |
| CMM_2303 | 2 | 11 | -1.965093 | putative two-component system sensor kinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2288 | YERSSTKINASE | 29 | 0.012 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2292 | IGASERPTASE | 30 | 0.047 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2295 | BCTERIALGSPG | 43 | 5e-08 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| 36 | CMM_PS_21 | CMM_2328 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_PS_21 | 4 | 9 | 4.074327 | putative sugar ABC transporter, ATP-binding | |
| CMM_2311 | 3 | 11 | 3.780958 | conserved hypothetical protein | |
| CMM_2312 | 4 | 10 | 3.438733 | putative tRNA/rRNA methyltransferase | |
| CMM_2313 | 2 | 9 | 2.748804 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate | |
| CMM_2314 | 3 | 9 | 2.918155 | putative transcriptional regulator, CarD family | |
| CMM_2315 | 2 | 13 | 0.994172 | hypothetical protein | |
| CMM_2316 | 2 | 10 | 0.905012 | putative two-component system response | |
| CMM_2317 | 1 | 10 | 0.816367 | putative two-component system sensor kinase | |
| CMM_2318 | 1 | 10 | 0.827721 | putative phosphate transport system regulator | |
| CMM_2319 | 2 | 11 | 0.621410 | phosphoglycerate mutase | |
| CMM_2320 | 2 | 10 | 1.576752 | putative membrane protein | |
| CMM_2321 | 2 | 7 | 1.432446 | putative aminomethyltransferase | |
| CMM_2323 | 2 | 8 | 1.500683 | conserved hypothetical protein | |
| CMM_2324 | 2 | 8 | 1.185497 | hypothetical protein | |
| CMM_2325 | 2 | 10 | 0.576720 | putative membrane protein | |
| CMM_2326 | 1 | 12 | -0.098396 | transcriptional regulator | |
| CMM_2327 | 3 | 14 | 0.446582 | putative acetyltransferase | |
| CMM_2328 | 2 | 11 | 0.825458 | putative NTP pyrophosphohydrolase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2314 | ACETATEKNASE | 29 | 0.030 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2318 | NUCEPIMERASE | 167 | 4e-51 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2320 | DHBDHDRGNASE | 103 | 1e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2321 | BACINVASINB | 34 | 0.001 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| 37 | CMM_2340 | CMM_2356 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2340 | -1 | 13 | 3.055077 | hypothetical protein predicted by | |
| CMM_2341 | 1 | 13 | 3.261435 | putative aldose-1-epimerase | |
| CMM_2342 | 3 | 11 | 4.259844 | putative DeoR-family transcriptional regulator | |
| CMM_2343 | 0 | 11 | 4.050030 | putative acetyltransferase/ siderophore binding | |
| CMM_2344 | 1 | 10 | 3.606614 | putative bifunctional methylenetetrahydrofolate | |
| CMM_2345 | 1 | 9 | 3.623462 | serine hydroxymethyltransferase | |
| CMM_2346 | 2 | 10 | 3.798784 | putative glycosidase | |
| CMM_2347 | 3 | 11 | 4.112504 | hypothetical protein | |
| CMM_2348 | 4 | 12 | 4.242616 | putative MFS permease | |
| CMM_2349 | 3 | 11 | 3.557301 | putative oxidoreductase | |
| CMM_2350 | 4 | 10 | 4.002702 | putative manganese transporter, NRAMP family | |
| CMM_2351 | 1 | 7 | 2.715518 | hypothetical protein | |
| CMM_2352 | -1 | 6 | 2.288228 | putative sugar MFS-permease | |
| CMM_2353 | 0 | 8 | 2.624659 | putative formyltetrahydrofolate deformylase | |
| CMM_2354 | 1 | 8 | 2.204611 | putative ABC-transporter, permease component | |
| CMM_2355 | 1 | 9 | 2.385181 | putative serine protease, peptidase family S8A | |
| CMM_2356 | 2 | 10 | 2.177884 | putative subtilisin-like serine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2349 | FERRIBNDNGPP | 60 | 1e-12 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2355 | cloacin | 29 | 0.042 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 38 | CMM_2456 | CMM_2478 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2456 | 2 | 9 | 2.168205 | conserved hypothetical protein | |
| CMM_2457 | 1 | 7 | 2.330789 | hypothetical protein | |
| CMM_2458 | 0 | 7 | 2.634303 | conserved hypothetical protein | |
| CMM_2459 | -1 | 6 | 2.383597 | hypothetical protein | |
| CMM_2460 | -1 | 9 | 1.227970 | hypothetical protein | |
| CMM_2461 | 2 | 8 | 1.107312 | conserved hypothetical protein | |
| CMM_2462 | 3 | 10 | 1.311217 | putative ATP-dependent helicase | |
| CMM_2463 | 3 | 9 | 1.153939 | putative transcriptional regulator, TetR family | |
| CMM_2464 | -1 | 8 | 0.648945 | conserved hypothetical protein | |
| CMM_2465 | -1 | 7 | 0.177884 | conserved hypothetical protein, putative | |
| CMM_2466 | -1 | 7 | -0.309938 | putative ATP-dependent helicase | |
| CMM_2467 | -2 | 7 | -0.718271 | putative endonuclease VIII/DNA glycosylase | |
| CMM_2468 | 3 | 9 | 1.804750 | putative cationic amino acid permease, APC | |
| CMM_2469 | 2 | 9 | 1.472659 | putative RNA polymerase sigma factor, | |
| CMM_2470 | 3 | 10 | 0.816698 | putative two-component system, sensor | |
| CMM_2471 | 0 | 10 | 0.331037 | hypothetical protein | |
| CMM_2472 | 0 | 10 | 0.392442 | hypothetical protein | |
| CMM_2473 | 0 | 12 | -0.395692 | putative transcriptional regulator | |
| CMM_2474 | 0 | 13 | -2.698896 | putative amidase | |
| CMM_2475 | 1 | 15 | -2.858959 | conserved hypothetical protein, putative | |
| CMM_2476 | 1 | 14 | -1.900130 | putative penicillin-binding protein | |
| CMM_2477 | 3 | 16 | -2.662000 | putative transcriptional regulator, MarR-family | |
| CMM_2478 | 4 | 15 | -2.015492 | putative monooxygenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2456 | PF03309 | 30 | 0.017 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2457 | PF09025 | 28 | 0.046 | YopR Core | |
>PF09025#YopR Core | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2460 | RTXTOXIND | 31 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2463 | PF03544 | 40 | 9e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2475 | HTHFIS | 110 | 3e-30 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2477 | 56KDTSANTIGN | 25 | 0.042 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
| 39 | CMM_2560 | CMM_2570 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2560 | 2 | 7 | -1.795330 | hypothetical protein | |
| CMM_2561 | 1 | 7 | -3.967995 | putative transcriptional regulator, ArsR family | |
| CMM_2562 | 2 | 7 | -3.763255 | hypothetical protein | |
| CMM_2563 | 2 | 7 | -4.228667 | putative acetyltransferase | |
| CMM_2564 | 0 | 7 | -2.410753 | putative two-component system, sensor kinase | |
| CMM_2565 | -1 | 7 | -2.052260 | putative two-component system, response | |
| CMM_2566 | -2 | 7 | -0.277164 | hypothetical membrane protein | |
| CMM_2567 | -1 | 8 | 1.464715 | conserved membrane protein, putative exporter | |
| CMM_2568 | 1 | 12 | 2.506102 | conserved hypothetical protein | |
| CMM_2569 | 1 | 9 | 3.062511 | putative multidrug ABC transporter, permease | |
| CMM_2570 | 2 | 11 | 3.074535 | putative ABC transporter, ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2562 | PF05272 | 35 | 5e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2569 | PF03309 | 29 | 0.032 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| 40 | CMM_2596 | CMM_2628 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2596 | -1 | 12 | -3.125146 | putative ferredoxin/ferredoxin-NADP reductase | |
| CMM_2597 | 2 | 16 | -4.008375 | putative polyprenyl diphosphate synthase | |
| CMM_2598 | 3 | 17 | -5.035231 | putative menaquinone biosynthesis | |
| CMM_2599 | 5 | 21 | -4.181765 | putative sugar MFS permease | |
| CMM_2600 | 4 | 19 | -4.630395 | putative isochorismate synthase | |
| CMM_2601 | 4 | 20 | -4.586019 | menaquinone biosynthesis bifunctional protein | |
| CMM_2602 | 4 | 20 | -6.041554 | hypothetical membrane protein | |
| CMM_2603 | 4 | 19 | -6.468071 | hypothetical membrane protein | |
| CMM_2604 | 5 | 21 | -6.581162 | hypothetical protein | |
| CMM_2605 | 5 | 22 | -6.703973 | putative 1,4-dihydroxy-2-naphthoate | |
| CMM_2606 | 4 | 21 | -5.999868 | putative mutase | |
| CMM_2607 | 4 | 19 | -5.925035 | putative metallopeptidase, family M13 | |
| CMM_2608 | 4 | 17 | -5.797881 | putative transcriptional regulator, Cro/CI | |
| CMM_2609 | 7 | 18 | -5.175057 | putative xanthine/uracil family permease, NCS2 | |
| CMM_2610 | 6 | 16 | -5.693860 | conserved hypothetical protein, putative | |
| CMM_2611 | 5 | 17 | -5.238018 | putative cytosine permease, NCS1 family | |
| CMM_2612 | 7 | 19 | -5.579634 | putative transcriptional regulator, GntR-family | |
| CMM_2613 | 6 | 19 | -5.892464 | putative phosphatase | |
| CMM_2614 | 5 | 15 | -4.492805 | putative homocysteine S-methyltransferase | |
| CMM_2615 | 2 | 13 | -5.102302 | putative nucleoside-diphosphate-sugar epimerase | |
| CMM_2616 | 1 | 12 | -5.612893 | putative transcriptional regulator | |
| CMM_2617 | 1 | 12 | -5.840323 | putative MFS permease | |
| CMM_2618 | 1 | 11 | -5.842547 | putative aldo/keto reductase | |
| CMM_2619 | 1 | 11 | -5.110404 | putative transcriptional regulator, LysR-family | |
| CMM_2620 | 0 | 14 | -4.486989 | putative permease, DMT family | |
| CMM_2621 | 1 | 13 | -3.358514 | putative membrane protein | |
| CMM_2622 | 1 | 12 | -1.302625 | conserved hypothetical protein, putative | |
| CMM_2623 | 1 | 10 | -1.021682 | putative sugar kinase | |
| CMM_2624 | 0 | 9 | -0.380801 | putative ranscriptional regulator, LacI-family | |
| CMM_2625 | 1 | 12 | -2.612651 | putative sugar ABC transporter, substrate | |
| CMM_2626 | 2 | 13 | -4.053788 | putative sugar ABC transporter, permease | |
| CMM_2627 | 2 | 12 | -3.908705 | putative sugar ABC transporter, ATP-binding | |
| CMM_2628 | 2 | 12 | -3.463029 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2598 | SECYTRNLCASE | 519 | 0.0 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2611 | SECA | 32 | 0.003 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2617 | BINARYTOXINB | 28 | 0.041 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2620 | TCRTETOQM | 74 | 3e-16 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2621 | TCRTETOQM | 589 | 0.0 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 41 | CMM_2668 | CMM_2682 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2668 | 0 | 18 | -3.068452 | putative short chain | |
| CMM_2669 | -1 | 20 | -1.501361 | putative transcriptional regulator, TetR family | |
| CMM_PS_23 | -1 | 13 | 0.040253 | conserved hypothetical protein | |
| CMM_2670 | 0 | 11 | 0.040870 | hypothetical membrane protein | |
| CMM_2671 | 2 | 9 | 1.606568 | hypothetical membrane protein | |
| CMM_2672 | 2 | 9 | 2.273460 | putative L-alanine dehydrogenase | |
| CMM_2673 | 2 | 9 | 3.240122 | putative leucine-responsive regulatory | |
| CMM_2674 | 3 | 11 | 3.504317 | putative deoxynucleotide triphosphate deaminase | |
| CMM_2675 | 3 | 9 | 3.411938 | *hypothetical protein | |
| CMM_2676 | 1 | 9 | 3.617398 | hypothetical protein | |
| CMM_2677 | 1 | 14 | 3.057712 | putative ABC transporter, ATP-binding protein | |
| CMM_2678 | 1 | 11 | 3.406840 | hypothetical membrane protein | |
| CMM_2679 | 3 | 11 | 2.862463 | hypothetical membrane protein | |
| CMM_2680 | 4 | 8 | 3.464033 | putative transcriptional regulator, GntR family | |
| CMM_2681 | 4 | 8 | 3.773912 | putative gluconokinase | |
| CMM_2682 | 4 | 9 | 3.692418 | putative gluconate permease, GntP family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2676 | BLACTAMASEA | 272 | 6e-93 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2677 | HTHTETR | 47 | 9e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 42 | CMM_2734 | CMM_2741 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2734 | 2 | 10 | 1.871085 | 50S ribosomal protein L9 | |
| CMM_2735 | 2 | 10 | 1.703063 | 30S ribosomal protein S18 | |
| CMM_2736 | 3 | 12 | 2.843426 | single-strand binding protein | |
| CMM_2737 | 3 | 13 | 3.427368 | 30S ribosomal protein S6 | |
| CMM_2738 | 2 | 11 | 3.023594 | putative RNA nucleotidyltransferase | |
| CMM_2739 | 3 | 12 | 2.894730 | conserved hypothetical protein | |
| CMM_2740 | 2 | 9 | 2.339817 | conserved membrane protein, MOP family | |
| CMM_2741 | 2 | 8 | 1.641403 | putative thioredoxin reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2736 | BACINVASINB | 33 | 0.002 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2740 | HTHFIS | 51 | 7e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 43 | CMM_2783 | CMM_2792 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2783 | 2 | 8 | -1.923565 | ||
| CMM_2784 | 3 | 8 | -1.885074 | ||
| CMM_2785 | 2 | 10 | -2.642955 | ||
| CMM_2786 | 3 | 13 | -2.113783 | ||
| CMM_2787 | 0 | 12 | -1.603998 | ||
| CMM_2788 | 0 | 12 | -0.899208 | ||
| CMM_2789 | -1 | 11 | -0.149940 | ||
| CMM_2790 | 1 | 13 | 0.454959 | ||
| CMM_2791 | 3 | 16 | 0.799208 | ||
| CMM_2792 | 2 | 11 | 0.001994 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2785 | SACTRNSFRASE | 43 | 8e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2786 | ARGREPRESSOR | 27 | 0.037 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2789 | SECETRNLCASE | 31 | 2e-04 | Bacterial translocase SecE signature. | |
>SECETRNLCASE#Bacterial translocase SecE signature. | |||||
| 44 | CMM_2823 | CMM_2865 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2823 | 1 | 6 | 3.047189 | ||
| CMM_2824 | 0 | 8 | 2.974611 | ||
| CMM_2825 | 0 | 9 | 2.894785 | ||
| CMM_2826 | 1 | 9 | 3.074101 | ||
| CMM_2827 | 4 | 10 | 3.146302 | ||
| CMM_2828 | 3 | 10 | 2.837897 | ||
| CMM_2829 | 2 | 9 | 2.338439 | ||
| CMM_2830 | 1 | 10 | 2.968360 | ||
| CMM_2831 | 1 | 9 | 2.863716 | ||
| CMM_2832 | 1 | 13 | 2.858577 | ||
| CMM_2833 | 1 | 12 | 3.421665 | ||
| CMM_2834 | -2 | 13 | 2.962331 | ||
| CMM_2835 | 0 | 12 | 3.772185 | ||
| CMM_2836 | 0 | 9 | 3.029345 | ||
| CMM_2837 | 0 | 7 | 1.247204 | ||
| CMM_2838 | -1 | 6 | 0.409923 | ||
| CMM_2839 | 0 | 6 | -0.368894 | ||
| CMM_2840 | 1 | 8 | -0.381777 | ||
| CMM_2841 | 3 | 18 | -4.953748 | ||
| CMM_2842 | 4 | 26 | -7.159723 | ||
| CMM_2843 | 5 | 30 | -7.148062 | ||
| CMM_2844 | 6 | 20 | -6.248820 | ||
| CMM_2845 | 7 | 22 | -6.033275 | ||
| CMM_2846 | 6 | 21 | -5.159853 | ||
| CMM_2847 | 0 | 7 | -1.234716 | ||
| CMM_2848 | -2 | 7 | 0.306332 | ||
| CMM_2849 | -2 | 7 | 1.244714 | ||
| CMM_2850 | 3 | 9 | 3.318811 | ||
| CMM_2851 | 2 | 9 | 2.900524 | ||
| CMM_2852 | 3 | 10 | 2.676166 | ||
| CMM_2853 | 3 | 7 | 3.267691 | ||
| CMM_2854 | 4 | 7 | 3.064409 | ||
| CMM_2855 | 4 | 11 | 2.887993 | ||
| CMM_2856 | 4 | 10 | 2.457356 | ||
| CMM_2857 | 4 | 16 | 2.970872 | ||
| CMM_2858 | 4 | 13 | 3.041786 | ||
| CMM_2859 | 3 | 11 | 2.414477 | ||
| CMM_2860 | 3 | 11 | 1.675876 | ||
| CMM_2861 | 2 | 9 | 1.715921 | ||
| CMM_2862 | 1 | 9 | 1.120854 | ||
| CMM_2863 | 4 | 9 | 1.244415 | ||
| CMM_2864 | 3 | 9 | 1.405526 | ||
| CMM_2865 | 2 | 10 | 1.700742 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2825 | ISCHRISMTASE | 44 | 2e-07 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2831 | NUCEPIMERASE | 43 | 5e-07 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2833 | TCRTETB | 30 | 0.019 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2844 | TYPE4SSCAGA | 29 | 0.027 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2848 | DHBDHDRGNASE | 96 | 9e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2849 | RTXTOXINA | 31 | 0.014 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2850 | HELNAPAPROT | 28 | 0.005 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| 45 | CMM_2896 | CMM_2908 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2896 | 7 | 34 | -9.341969 | ||
| CMM_2897 | 7 | 35 | -10.009117 | ||
| CMM_2898 | 7 | 40 | -11.276492 | ||
| CMM_2899 | 8 | 48 | -12.223314 | ||
| CMM_2900 | 7 | 45 | -10.782212 | ||
| CMM_2901 | 7 | 45 | -10.219235 | ||
| CMM_PS_24 | 1 | 19 | -2.204300 | ||
| CMM_2902 | 0 | 18 | -2.108155 | ||
| CMM_2903 | 1 | 11 | -1.606605 | ||
| CMM_2904 | 1 | 9 | -0.677054 | ||
| CMM_2905 | 2 | 8 | 0.319524 | ||
| CMM_2906 | 2 | 8 | -0.198169 | ||
| CMM_2907 | 1 | 7 | -0.373738 | ||
| CMM_2908 | 2 | 5 | 0.203139 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2896 | PREPILNPTASE | 28 | 0.030 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 46 | CMM_0012 | CMM_0017 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0012 | 1 | 7 | -1.338834 | conserved membrane protein | |
| CMM_0013 | 0 | 7 | -1.398937 | putative sortase | |
| CMM_0014 | -1 | 8 | -1.196477 | para-aminobenzoate synthetase component II | |
| CMM_0015 | -2 | 9 | -1.056706 | penicillin-binding protein | |
| CMM_0016 | -3 | 9 | -1.140459 | putative cell division membrane protein | |
| CMM_0017 | -3 | 7 | 0.131898 | putative serine/threonine protein phosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0012 | 60KDINNERMP | 28 | 0.004 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0015 | YERSSTKINASE | 33 | 0.003 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0016 | YERSSTKINASE | 35 | 0.001 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0017 | PF06872 | 32 | 0.007 | EspG protein | |
>PF06872#EspG protein | |||||
| 47 | CMM_0084 | CMM_0093 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0084 | 3 | 25 | -7.017651 | putative two-component system sensor kinase | |
| CMM_0085 | 3 | 26 | -7.194950 | putative transport protein, RND family | |
| CMM_0086 | 2 | 28 | -6.978495 | putative cytochrome P450 | |
| CMM_0087 | 0 | 32 | -6.290160 | putative 3Fe-4S ferredoxin | |
| CMM_0088 | 0 | 30 | -5.810026 | putative ferredoxin reductase | |
| CMM_0089 | 1 | 32 | -5.787476 | putative beta-glucosidase, glycosyl hydrolase | |
| CMM_0090 | 1 | 30 | -5.729917 | putative LacI-family transcriptional regulator | |
| CMM_0091 | 1 | 32 | -4.962276 | beta-glucosidase, glycosyl hydrolase family 3 | |
| CMM_0092 | 0 | 30 | -4.790859 | beta-glucosidase, glycosyl hydrolase family 1 | |
| CMM_0093 | 0 | 30 | -4.945054 | putative beta-galactosidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0084 | SECFTRNLCASE | 29 | 0.031 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0087 | HTHTETR | 67 | 9e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0089 | HTHTETR | 28 | 0.036 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0091 | HTHFIS | 66 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0093 | ACRIFLAVINRP | 46 | 6e-07 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 48 | CMM_0117 | CMM_0125 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0117 | -2 | 8 | 1.196048 | putative RNA polymerase ECF-subfamily sigma | |
| CMM_0118 | -3 | 11 | 0.913788 | conserved hypothetical protein | |
| CMM_0119 | -2 | 9 | 1.406959 | putative sortase | |
| CMM_0120 | -1 | 10 | 1.477719 | hypothetical protein | |
| CMM_0121 | 0 | 10 | 1.616121 | hypothetical protein | |
| CMM_0122 | 0 | 10 | 2.007300 | hypothetical protein | |
| CMM_0123 | 0 | 7 | 1.914456 | putative pyroglutamylpeptidase | |
| CMM_0124 | 1 | 7 | 2.873239 | conserved hypothetical protein | |
| CMM_0125 | 3 | 10 | 3.544443 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0117 | TCRTETB | 119 | 1e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0118 | TETREPRESSOR | 54 | 5e-11 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0119 | HTHTETR | 65 | 5e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0120 | RTXTOXIND | 31 | 0.025 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0124 | NUCEPIMERASE | 36 | 7e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0125 | ENTSNTHTASED | 88 | 3e-23 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| 49 | CMM_0146 | CMM_0151 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0146 | 3 | 9 | 0.925404 | putative membrane protein | |
| CMM_0147 | 2 | 9 | 0.360096 | conserved hypothetical protein | |
| CMM_0148 | 2 | 8 | 0.161087 | hypothetical protein | |
| CMM_0149 | 2 | 7 | -0.144116 | putative transcriptional regulator, LacI-family | |
| CMM_0150 | 1 | 6 | 0.497333 | conserved hypothetical protein | |
| CMM_0151 | 1 | 11 | -0.256523 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0146 | PF06776 | 27 | 0.048 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0148 | cloacin | 34 | 5e-04 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0150 | INTIMIN | 39 | 2e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0151 | SHAPEPROTEIN | 138 | 2e-38 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 50 | CMM_0165 | CMM_0171 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0165 | -2 | 7 | 1.729537 | conserved hypothetical protein | |
| CMM_0166 | -3 | 6 | 1.253736 | putative Mn2+/Zn2+ ABC-type | |
| CMM_0167 | -2 | 7 | 1.987309 | conserved hypothetical protein | |
| CMM_0167a | -1 | 7 | -0.938877 | NAD-dependent aldehyde dehydrogenase | |
| CMM_0168 | -1 | 7 | -0.665438 | hypothetical protein | |
| CMM_0169 | 1 | 8 | -0.868219 | putative glycosyltransferase | |
| CMM_0170 | 1 | 7 | -0.408931 | hypothetical protein | |
| CMM_0171 | 0 | 9 | 0.151273 | O-acetylhomoserine (thiol)-lyase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0165 | PF05272 | 29 | 0.030 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0166 | FERRIBNDNGPP | 154 | 5e-47 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0169 | HTHFIS | 51 | 8e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0171 | SACTRNSFRASE | 38 | 6e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 51 | CMM_0186 | CMM_0193 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0186 | 2 | 13 | 1.574291 | hypothetical protein | |
| CMM_0187 | 4 | 13 | 1.382353 | putative glycosyl hydrolase, family 2 | |
| CMM_0188 | 3 | 12 | 1.006354 | putative dehydrogenase/oxidoreductase | |
| CMM_0189 | 2 | 10 | 2.312886 | putative drug exporter, RND family | |
| CMM_0190 | 2 | 8 | 3.021138 | putative transcriptional regulator, TetR-family | |
| CMM_0191 | -2 | 7 | 0.720861 | putative membrane protein | |
| CMM_0192 | -2 | 7 | -0.612336 | 3-hydroxyacyl-Coenzyme A dehydrogenase | |
| CMM_0193 | -1 | 7 | -1.706442 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0186 | SALSPVBPROT | 30 | 0.027 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0187 | HTHTETR | 50 | 9e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0188 | TCRTETB | 138 | 8e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0190 | TETREPRESSOR | 41 | 9e-07 | Tetracycline repressor protein signature. | |
>TETREPRESSOR#Tetracycline repressor protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0193 | HTHTETR | 65 | 6e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 52 | CMM_0238 | CMM_0245 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0238 | -3 | 7 | 1.180041 | hypothetical protein | |
| CMM_0239 | 0 | 7 | 1.696816 | putative MFS permease | |
| CMM_0240 | 2 | 10 | 2.492569 | conserved hypothetical protein | |
| CMM_0241 | 11 | 46 | -8.316713 | putative transcriptional regulator, MerR family | |
| CMM_0242 | 10 | 40 | -7.123587 | conserved hypothetical protein | |
| CMM_0243 | 10 | 40 | -6.700904 | putative membrane protein involved in chromosome | |
| CMM_0244 | 10 | 38 | -6.428382 | putative membrane protein involved in chromosome | |
| CMM_0245 | 10 | 35 | -5.773936 | putative acetyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0238 | TCRTETB | 71 | 2e-15 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0240 | DHBDHDRGNASE | 90 | 2e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0241 | TCRTETB | 25 | 0.044 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0244 | HTHFIS | 79 | 4e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0245 | GPOSANCHOR | 41 | 9e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 53 | CMM_0296 | CMM_0303 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0296 | -3 | 9 | 0.061592 | conserved hypothetical protein | |
| CMM_0297 | -3 | 11 | 1.022220 | putative thioredoxin reductase | |
| CMM_0298 | -2 | 11 | 1.858868 | ATPase with chaperone activity, ATP-binding | |
| CMM_0299 | 0 | 10 | 3.069082 | putative transcriptional regulator | |
| CMM_0300 | 0 | 8 | 3.347475 | conserved hypothetical protein | |
| CMM_0301 | 0 | 9 | 2.641851 | hypothetical protein | |
| CMM_0302 | -1 | 11 | 1.974632 | putative oxidoreductase | |
| CMM_0303 | -1 | 10 | 1.421391 | putative dipeptidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0296 | MALTOSEBP | 44 | 5e-07 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0300 | NUCEPIMERASE | 32 | 0.002 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0301 | HTHTETR | 55 | 3e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0303 | DHBDHDRGNASE | 56 | 1e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 54 | CMM_0331 | CMM_0337 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0331 | 0 | 9 | 5.157915 | putative sugar ABC transporter, permease | |
| CMM_0332 | -1 | 10 | 4.291314 | putative sugar ABC transporter, permease | |
| CMM_0333 | -1 | 8 | 3.270429 | putative glucosamine-6-phosphate isomerase | |
| CMM_0334 | -1 | 9 | 3.008252 | beta-galactosidase | |
| CMM_0335 | 0 | 9 | 2.411608 | putative acyl-CoA thioesterase | |
| CMM_0336 | 0 | 7 | 1.935792 | conserved hypothetical protein | |
| CMM_0337 | 1 | 9 | 1.825466 | putative transcriptional regulator, LacI family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0331 | ISCHRISMTASE | 58 | 1e-10 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0333 | ENTSNTHTASED | 97 | 2e-26 | Enterobactin synthetase component D signature. | |
>ENTSNTHTASED#Enterobactin synthetase component D signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0335 | cloacin | 34 | 0.002 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0337 | BLACTAMASEA | 34 | 0.001 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| 55 | CMM_0400 | CMM_0409 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0400 | -1 | 11 | 0.704143 | putative sugar ABC transporter, binding protein | |
| CMM_0401 | 0 | 11 | 0.473694 | putative sugar uptake ABC transporter, ATPase | |
| CMM_0402 | 0 | 10 | 0.607163 | transcriptional regulator, LacI family | |
| CMM_0403 | 0 | 8 | 1.091574 | manganese-containing catalase | |
| CMM_0404 | 1 | 8 | 1.562448 | hypothetical protein | |
| CMM_0405 | 1 | 7 | 1.712482 | putative phosphoketolase | |
| CMM_0406 | 1 | 8 | 1.163163 | hypothetical secreted protein, putative | |
| CMM_0407 | 2 | 12 | 1.444790 | putative hemagglutinin/hemolysin-related | |
| CMM_0408 | 2 | 12 | 0.392170 | conserved hypothetical protein | |
| CMM_0409 | 3 | 14 | -0.270906 | putative iron-siderophore ABC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0400 | DHBDHDRGNASE | 132 | 9e-40 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0401 | DHBDHDRGNASE | 67 | 3e-15 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0403 | TCRTETB | 29 | 0.050 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0404 | HTHFIS | 53 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0406 | TCRTETB | 131 | 2e-35 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0409 | DHBDHDRGNASE | 60 | 4e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 56 | CMM_0457 | CMM_0464 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0457 | 0 | 9 | -0.543296 | putative N-acetylglucosamine-6-phosphate | |
| CMM_0458 | 1 | 10 | -0.368797 | putative 3',5'-cyclic-nucleotide | |
| CMM_0459 | 2 | 9 | 1.454411 | hypothetical protein | |
| CMM_0460 | 2 | 9 | 1.555826 | putative membrane protein | |
| CMM_0461 | 2 | 15 | 1.853770 | putative ATP-dependent DNA helicase | |
| CMM_0462 | 1 | 12 | 3.060065 | putative adenine-specific DNA-modification | |
| CMM_0463 | 4 | 12 | 2.933008 | putative membrane protein | |
| CMM_0464 | 3 | 12 | 1.863550 | putative membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0457 | HTHTETR | 51 | 5e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0458 | TCRTETB | 148 | 3e-41 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0463 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0464 | NUCEPIMERASE | 58 | 9e-12 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 57 | CMM_0468 | CMM_0477 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0468 | -2 | 8 | 0.195568 | conserved hypothetical protein | |
| CMM_0469 | 0 | 7 | 1.118600 | conserved hypothetical protein | |
| CMM_0470 | 0 | 7 | 1.399369 | conserved hypothetical protein | |
| CMM_0471 | 0 | 6 | 1.378797 | putative lysophospholipase | |
| CMM_0472 | 2 | 9 | 3.136072 | putative acetyltransferase | |
| CMM_0473 | 2 | 10 | 2.228085 | conserved hypothetical protein | |
| CMM_0474 | 4 | 9 | 2.233440 | putative serine protease, family S53 | |
| CMM_0476 | 4 | 12 | 2.774113 | transcriptional regulator, TetR family | |
| CMM_0477 | 5 | 11 | 3.625103 | putative phospholipase C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0469 | DHBDHDRGNASE | 112 | 1e-31 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0471 | PF06580 | 32 | 0.006 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0473 | HTHFIS | 79 | 7e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0474 | BACINVASINB | 31 | 0.002 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0477 | FLGMOTORFLIN | 29 | 0.007 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| 58 | CMM_0500 | CMM_0503 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0500 | 3 | 6 | 3.079017 | putative 1-acylglycerol-3-phosphate | |
| CMM_0501 | 3 | 6 | 2.763318 | putative tRNA processing ribonuclease BN | |
| CMM_0502 | 1 | 7 | 1.076331 | Deoxyribodipyrimidine photo-lyase | |
| CMM_0503 | 1 | 9 | -0.107933 | putative glycosyl transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0500 | SACTRNSFRASE | 32 | 5e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0501 | PF05616 | 41 | 3e-05 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0502 | SUBTILISIN | 48 | 6e-08 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0503 | HTHTETR | 50 | 1e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 59 | CMM_0631 | CMM_0637 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0631 | -2 | 11 | 0.870312 | hypothetical membrane protein | |
| CMM_0632 | -2 | 9 | 2.161512 | putative exonuclease | |
| CMM_0633 | -1 | 5 | 2.702629 | putative dsDNA exonuclease subunit | |
| CMM_0634 | -2 | 7 | 2.721252 | putative serine/threonine-protein kinase | |
| CMM_0635 | -3 | 8 | 1.720781 | putative acyl-CoA ligase/aldehyde dehydrogenase | |
| CMM_0636 | -1 | 8 | 1.975759 | 3-oxoacyl-[acyl-carrier-protein] synthase | |
| CMM_0637 | -2 | 9 | 2.230963 | putative acetolactate synthase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0632 | PF06776 | 32 | 0.001 | Invasion associated locus B | |
>PF06776#Invasion associated locus B | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0635 | NUCEPIMERASE | 87 | 8e-22 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0637 | RTXTOXINA | 33 | 0.003 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0638 | PYOCINKILLER | 38 | 5e-05 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 60 | CMM_0670 | CMM_0678 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0670 | 1 | 9 | 3.062527 | putative membrane protein, possibly a | |
| CMM_0671 | 3 | 7 | 4.243251 | putative mannosyltransferase | |
| CMM_0672 | 3 | 9 | 4.804619 | putative glycosyltransferase | |
| CMM_0673 | 1 | 10 | 3.758344 | putative undecaprenyl-phosphate sugar | |
| CMM_0675 | -1 | 11 | 2.861892 | putative protein tyrosine kinase | |
| CMM_0676 | 0 | 12 | 2.650573 | putative acyltransferase | |
| CMM_0677 | 1 | 13 | 1.824650 | putative membrane-bound acyltransferase | |
| CMM_0678 | 2 | 13 | 1.597466 | putative esterase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0671 | ABC2TRNSPORT | 39 | 3e-05 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0673 | HTHTETR | 50 | 2e-09 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0674 | RTXTOXINA | 30 | 0.036 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0678 | YERSSTKINASE | 30 | 0.032 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| 61 | CMM_0818 | CMM_0825 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0818 | 1 | 8 | 0.962103 | conserved hypothetical protein | |
| CMM_0819 | 2 | 8 | 1.549094 | putative cystathionine beta-synthase | |
| CMM_0820 | 5 | 9 | 0.448183 | Ribonuclease H | |
| CMM_0821 | 4 | 9 | 0.119352 | putative transcriptional regulator, LacI-family | |
| CMM_0822 | 4 | 9 | 0.255129 | putative L-ribulokinase | |
| CMM_0823 | 5 | 7 | -0.918476 | putative L-ribulose-5-phosphate 4-epimerase | |
| CMM_0824 | 6 | 7 | -0.781680 | putative L-arabinose isomerase | |
| CMM_0825 | 5 | 7 | -0.566477 | putative sugar ABC transporter, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0818 | LPSBIOSNTHSS | 33 | 2e-04 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0819 | PF03544 | 35 | 9e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0820 | PF03544 | 37 | 2e-04 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0825 | MICOLLPTASE | 101 | 2e-23 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| 62 | CMM_0894 | CMM_0902 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0894 | 3 | 12 | -0.267793 | putative peptide ABC transporter, | |
| CMM_0895 | 1 | 11 | 0.432258 | putative MFS permease | |
| CMM_0896 | 1 | 12 | 0.546305 | putative peptide ABC transporter, ATP-binding | |
| CMM_0897 | 2 | 12 | 0.267209 | putative peptide ABC transporter, ATP-binding | |
| CMM_0898 | -3 | 13 | 0.449958 | Riboflavin synthase beta chain | |
| CMM_0899 | -1 | 12 | -0.268035 | 3,4-dihydroxy-2-butanone 4-phosphate | |
| CMM_0900 | -2 | 13 | -0.100449 | diaminohydroxyphosphoribosylaminopyrimidine | |
| CMM_0901 | -2 | 11 | -1.240008 | putative hydrolase | |
| CMM_0902 | -2 | 10 | -1.297592 | putative exonuclease III |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0894 | NUCEPIMERASE | 32 | 0.001 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0896 | ACETATEKNASE | 492 | e-177 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0897 | ICENUCLEATIN | 128 | 1e-31 | Ice nucleation protein signature. | |
>ICENUCLEATIN#Ice nucleation protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0900 | IGASERPTASE | 45 | 1e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0902 | CARBMTKINASE | 30 | 0.016 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 63 | CMM_0991 | CMM_0996 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_0991 | -2 | 10 | 1.350912 | conserved hypothetical protein | |
| CMM_0992 | -1 | 9 | 1.586835 | hypothetical protein | |
| CMM_0993 | -1 | 9 | 1.601364 | putative L-asparagine permease, APC family | |
| CMM_0994 | -3 | 9 | 0.081423 | hypothetical protein | |
| CMM_0995 | -2 | 7 | 0.434106 | putative MFS permease | |
| CMM_0996 | -2 | 7 | 0.745862 | putative transcriptional regulator, MarR family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0991 | RTXTOXIND | 31 | 0.019 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0994 | PF01206 | 27 | 0.035 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0995 | HTHFIS | 44 | 2e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_0996 | PF06580 | 36 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 64 | CMM_1037 | CMM_1049 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1037 | -2 | 7 | 1.580400 | putative K+ channel protein, beta subunit | |
| CMM_1038 | -2 | 7 | 0.877118 | putative potassium channel protein subunit | |
| CMM_1039 | 0 | 7 | 2.357167 | putative transcriptional regulator, TetR family | |
| CMM_1040 | 0 | 7 | 1.890977 | putative short chain dehydrogenase | |
| CMM_1041 | 1 | 7 | 2.817456 | conserved membrane protein, TerC family | |
| CMM_1042 | 1 | 7 | 3.494102 | putative membrane protein | |
| CMM_1043 | 2 | 10 | 3.991634 | putative Zn-dependant hydrolase | |
| CMM_1044 | 0 | 10 | 3.581825 | *putative serine protease, family S51 | |
| CMM_1045 | 0 | 8 | 2.010360 | putative uracil-DNA glycosylase | |
| CMM_1046 | 1 | 8 | 2.118782 | putative acetyltransferase | |
| CMM_1047 | 0 | 8 | 2.192738 | putative membrane bound protease | |
| CMM_1048 | 0 | 9 | 1.209064 | putative hexulose-6-phosphate synthase | |
| CMM_1049 | 0 | 14 | -0.811116 | putative 6-phospho-3-hexuloisomerase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1037 | RTXTOXINA | 31 | 0.025 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1042 | TCRTETA | 53 | 7e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1043 | HTHTETR | 74 | 1e-18 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1044 | CHLAMIDIAOM6 | 33 | 0.003 | Chlamydia cysteine-rich outer membrane protein 6 si... | |
>CHLAMIDIAOM6#Chlamydia cysteine-rich outer membrane protein 6 | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1045 | HTHFIS | 43 | 1e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1049 | HTHFIS | 91 | 2e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 65 | CMM_1054 | CMM_1061 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1054 | -1 | 8 | -1.646730 | putative siderophore-interacting protein | |
| CMM_1055 | 2 | 12 | -0.056254 | putative short chain alcohol dehydrogenase | |
| CMM_1056 | 3 | 13 | 0.210291 | hypothetical protein | |
| CMM_1057 | 3 | 10 | -0.218396 | putative pyridine nucleotide-disulphide | |
| CMM_1058 | 2 | 9 | -1.093721 | putative enoyl-CoA hydratase | |
| CMM_1059 | 2 | 10 | -1.999835 | putative F420-dependent NADP reductase | |
| CMM_1060 | 2 | 16 | -1.106053 | conserved hypothetical protein | |
| CMM_1061 | 1 | 14 | -0.073460 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1054 | SECA | 1125 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1055 | INTIMIN | 27 | 0.045 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1059 | PF06580 | 52 | 3e-09 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1061 | ACRIFLAVINRP | 28 | 0.017 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 66 | CMM_1109 | CMM_1115 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1109 | 5 | 28 | -8.562334 | conserved hypothetical protein | |
| CMM_1110 | 4 | 29 | -8.475603 | putative ATP-dependent RNA helicase | |
| CMM_1111 | 0 | 8 | -3.241403 | conserved hypothetical protein | |
| CMM_1112 | -1 | 9 | -2.745441 | putative membrane protein | |
| CMM_1113 | -1 | 9 | -2.381453 | conserved hypothetical protein | |
| CMM_1114 | -1 | 8 | -0.934004 | putative ATP-dependant DNA helicase/nuclease | |
| CMM_1115 | -2 | 8 | -0.584610 | putative ATP-dependent DNA helicase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1109 | ACETATEKNASE | 29 | 0.032 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1112 | PF06340 | 32 | 0.004 | Vibrio cholerae toxin co-regulated pilus biosynthesis pr... | |
>PF06340#Vibrio cholerae toxin co-regulated pilus biosynthesis | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1114 | HTHTETR | 61 | 9e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1115 | DHBDHDRGNASE | 107 | 6e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 67 | CMM_1136 | CMM_1147 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1136 | 1 | 8 | 1.907126 | putative transcriptional regulator, TetR family | |
| CMM_1137 | 1 | 6 | 2.728104 | putative carboxylesterase | |
| CMM_1138 | 2 | 8 | 3.164991 | hypothetical protein | |
| CMM_1139 | -1 | 7 | 1.745469 | putative hydrolase | |
| CMM_1140 | -1 | 7 | 0.762073 | putative acetyltransferase | |
| CMM_1141 | 0 | 8 | 1.454411 | hypothetical membrane protein | |
| CMM_1142 | -1 | 7 | 1.153294 | putative ATP-dependent RNA helicase | |
| CMM_1143 | -1 | 6 | 1.172795 | putative methyltransferase | |
| CMM_1145 | -2 | 7 | 0.831667 | putative transcriptional regulator, Cro/CI | |
| CMM_1146 | -1 | 7 | 1.257613 | hypothetical membrane protein | |
| CMM_1147 | -2 | 7 | 0.831519 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1137 | cloacin | 45 | 9e-07 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1142 | DHBDHDRGNASE | 122 | 4e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1143 | DHBDHDRGNASE | 116 | 1e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1144 | TCRTETA | 32 | 0.005 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1147 | PF06438 | 31 | 0.006 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
| 68 | CMM_1237 | CMM_1242 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1237 | 0 | 8 | 2.332658 | 2-oxoglutarate dehydrogenase E1 component | |
| CMM_1238 | -1 | 6 | 1.486827 | conserved membrane protein | |
| CMM_1239 | -1 | 8 | -0.687667 | conserved membrane protein | |
| CMM_1240 | -2 | 7 | -1.480472 | putative oxidoreductase | |
| CMM_1241 | -1 | 7 | -1.317002 | conserved hypothetical protein | |
| CMM_1242 | -2 | 8 | -2.178779 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1237 | NUCEPIMERASE | 41 | 7e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1240 | ABC2TRNSPORT | 33 | 7e-04 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1241 | PF06580 | 45 | 4e-07 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1242 | HTHFIS | 66 | 9e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 69 | CMM_1330 | CMM_1338 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1330 | -1 | 9 | 0.449699 | conserved hypothetical protein | |
| CMM_1331 | -1 | 7 | -0.028116 | DNA polymerase IV | |
| CMM_1332 | -1 | 7 | 0.679757 | putative membrane protein | |
| CMM_1333 | -1 | 8 | 0.647969 | UDP-glucose 6-dehydrogenase | |
| CMM_1334 | -2 | 9 | -0.692390 | maltooligosyl trehalose trehalohydrolase | |
| CMM_1335 | -2 | 8 | -0.433425 | maltooligosyltrehalose synthase | |
| CMM_1336 | -2 | 8 | -0.903315 | putative glucan debranching enzyme | |
| CMM_1337 | -2 | 9 | -1.147194 | conserved hypothetical protein | |
| CMM_1338 | -1 | 9 | -1.809077 | putative ABC-type transporter, permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1330 | TCRTETA | 53 | 1e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1331 | HTHFIS | 39 | 1e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1334 | HTHFIS | 43 | 5e-07 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1337 | DHBDHDRGNASE | 72 | 5e-17 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1338 | HTHTETR | 55 | 1e-11 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 70 | CMM_1456 | CMM_1467 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1456 | 1 | 8 | -1.508609 | putative phosphatase | |
| CMM_1457 | 0 | 9 | 1.780608 | oxygen-independent coproporphyrinogen III | |
| CMM_1458 | 0 | 11 | 1.827257 | conserved hypothetical protein | |
| CMM_1459 | -1 | 11 | 1.510794 | conserved hypothetical protein | |
| CMM_1460 | -2 | 10 | 1.295775 | putative transcriptional regulator, HrcA family | |
| CMM_1461 | -2 | 10 | 1.005650 | chaperone | |
| CMM_1462 | -3 | 9 | 0.429963 | conserved hypothetical protein | |
| CMM_1463 | 1 | 12 | -3.285233 | putative HIT family hydrolase | |
| CMM_1464 | -1 | 9 | -2.604161 | putative phosphate starvation-induced ATPase | |
| CMM_1465 | -1 | 9 | -2.163145 | putative metal-dependent hydrolase | |
| CMM_1466 | 0 | 10 | -1.861890 | conserved membrane protein | |
| CMM_1467 | 0 | 10 | -1.190061 | GTP-binding protein, era family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1456 | PF03544 | 32 | 0.003 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1461 | HELNAPAPROT | 75 | 5e-20 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1462 | RTXTOXINA | 33 | 0.020 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1463 | IGASERPTASE | 32 | 0.005 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1467 | HTHFIS | 31 | 0.012 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 71 | CMM_1490 | CMM_1496 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1490 | -2 | 10 | -0.187845 | hypothetical protein | |
| CMM_1491 | -1 | 8 | 0.802968 | *putative polypeptide deformylase | |
| CMM_1492 | 2 | 10 | 0.840178 | conserved membrane protein, putative transporter | |
| CMM_1493 | 2 | 11 | 0.758965 | putative glycosyltransferase | |
| CMM_1494 | 1 | 10 | 0.622168 | *putative membrane-bound acyltranferase | |
| CMM_1495 | 1 | 11 | 0.661664 | putative GDP-mannose 4,6-dehydratase | |
| CMM_1496 | 2 | 11 | 2.328228 | putative glycosyltransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1490 | TYPE3IMRPROT | 26 | 0.019 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1492 | CARBMTKINASE | 40 | 4e-06 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1495 | LPSBIOSNTHSS | 31 | 0.001 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1496 | IGASERPTASE | 37 | 3e-04 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 72 | CMM_1553 | CMM_1562 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1553 | -1 | 11 | -0.594702 | putative 3-oxoacyl-CoA thiolase | |
| CMM_1554 | 0 | 10 | -0.685893 | putative ribonuclease D | |
| CMM_1555 | 2 | 11 | -0.991130 | conserved hypothetical protein | |
| CMM_1556 | 5 | 11 | 1.109508 | putative pyrimidine reductase | |
| CMM_1557 | 4 | 10 | 1.205570 | conserved hypothetical protein putatively | |
| CMM_1558 | 2 | 10 | 0.684004 | Thiosulfate sulfurtransferase | |
| CMM_1559 | 1 | 10 | 0.416044 | putative ATPase | |
| CMM_1560 | -1 | 9 | -0.022116 | putative ammonium transporter, Amt family | |
| CMM_1561 | -1 | 8 | 0.413894 | probable oxidoreductase | |
| CMM_1562 | -1 | 9 | -0.325191 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1553 | UREASE | 32 | 0.005 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1554 | NUCEPIMERASE | 34 | 4e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1555 | TCRTETOQM | 111 | 7e-28 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1556 | ECOLNEIPORIN | 29 | 0.022 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1560 | PYOCINKILLER | 31 | 0.004 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1562 | PF07675 | 28 | 0.019 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| 73 | CMM_1942 | CMM_1949 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_1942 | -2 | 7 | 1.367699 | hypothetical protein | |
| CMM_1943 | -2 | 9 | 1.142123 | hypothetical protein | |
| CMM_1944 | -1 | 7 | 1.008112 | hypothetical protein | |
| CMM_1945 | -1 | 8 | 0.568666 | hypothetical protein | |
| CMM_1946 | -2 | 10 | 0.319007 | putative short chain | |
| CMM_1947 | -3 | 9 | -0.131632 | hypothetical protein | |
| CMM_1948 | -3 | 9 | -0.005299 | hypothetical protein | |
| CMM_1949 | -3 | 8 | 0.228328 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1942 | V8PROTEASE | 42 | 2e-06 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1947 | V8PROTEASE | 32 | 0.003 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1948 | V8PROTEASE | 43 | 1e-06 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_1949 | TCRTETB | 44 | 1e-06 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 74 | CMM_2058 | CMM_2066 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2058 | 0 | 8 | -1.089593 | hypothetical protein with peptidoglycan binding | |
| CMM_2059 | 0 | 8 | -1.865300 | hypothetical protein | |
| CMM_2060 | 0 | 9 | -1.018222 | putative gamma-aminobutyrate permease, APC | |
| CMM_2061 | 0 | 9 | -0.374307 | conserved hypothetical protein, phosphoglycerate | |
| CMM_2062 | 0 | 8 | 1.283575 | conserved hypothetical protein | |
| CMM_2063 | 1 | 8 | 2.197916 | conserved hypothetical protein | |
| CMM_2064 | 1 | 8 | 2.854164 | hypothetical protein | |
| CMM_2065 | 1 | 6 | 2.968705 | hypothetical protein | |
| CMM_2066 | 2 | 8 | 2.854995 | putative GTP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2058 | BCTERIALGSPF | 29 | 0.013 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2062 | HELNAPAPROT | 107 | 2e-32 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2063 | DHBDHDRGNASE | 113 | 2e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2065 | PF06580 | 36 | 2e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2066 | HTHFIS | 56 | 2e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 75 | CMM_2088 | CMM_2093 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2088 | 0 | 8 | 2.765029 | hypothetical protein | |
| CMM_2089 | 0 | 7 | 2.866752 | putative amino acid permease, APC family | |
| CMM_PS_18 | 0 | 7 | 2.325377 | conserved hypothetical protein | |
| CMM_2090 | 0 | 7 | 1.413817 | conserved hypothetical protein | |
| CMM_2091 | 0 | 8 | 1.335866 | putative anti-sigma regulatory factor (Ser/Thr | |
| CMM_2092 | 0 | 8 | 1.411108 | putative anti-sigma factor antagonist | |
| CMM_2093 | 1 | 9 | 1.301744 | putative glycosyl transferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2088 | PHPHTRNFRASE | 33 | 0.001 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2090 | DHBDHDRGNASE | 79 | 6e-20 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2093 | PF04183 | 477 | e-162 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2094 | PF05616 | 29 | 0.030 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| 76 | CMM_2153 | CMM_2161 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2153 | -2 | 10 | 1.928559 | putative UDP-glucose 4-epimerase | |
| CMM_2154 | -2 | 9 | 1.775204 | hypothetical protein | |
| CMM_2155 | -1 | 8 | -0.087896 | putative short chain | |
| CMM_2156 | 0 | 7 | 0.211248 | hypothetical membrane protein | |
| CMM_2157 | 0 | 6 | 1.011728 | hypothetical protein | |
| CMM_2158 | -1 | 7 | 1.100555 | hypothetical protein | |
| CMM_2159 | -1 | 8 | 0.823773 | hypothetical protein | |
| CMM_2160 | 0 | 6 | 3.032660 | hypothetical protein | |
| CMM_2161 | 0 | 7 | 4.223612 | putative permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2153 | NUCEPIMERASE | 92 | 3e-23 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2157 | BCTERIALGSPC | 30 | 0.016 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2158 | YERSSTKINASE | 42 | 3e-06 | Yersinia serine/threonine protein kinase signature. | |
>YERSSTKINASE#Yersinia serine/threonine protein kinase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2159 | PF05616 | 37 | 4e-05 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2161 | INFPOTNTIATR | 62 | 2e-13 | Macrophage infectivity potentiator signature. | |
>INFPOTNTIATR#Macrophage infectivity potentiator signature. | |||||
| 77 | CMM_2260 | CMM_2267 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2260 | -2 | 11 | 1.428419 | putative ribonucleoside-diphosphate reductase | |
| CMM_2261 | -1 | 11 | 0.825868 | putative MFS permease | |
| CMM_2262 | 1 | 9 | 1.052690 | hypothetical protein | |
| CMM_2263 | 1 | 8 | 0.188382 | putative aldo/keto reductase | |
| CMM_2264 | 1 | 7 | 0.506319 | hypothetical membrane protein | |
| CMM_2265 | 0 | 7 | -0.077880 | putative secreted serine protease, family S1C | |
| CMM_2266 | -1 | 8 | 0.416527 | putative alpha-L-arabinofuranosidase | |
| CMM_2267 | -2 | 7 | -0.235566 | putative L-arabinose ABC transporter, permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2260 | SUBTILISIN | 165 | 1e-49 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2262 | RTXTOXIND | 28 | 0.025 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2265 | HTHTETR | 38 | 2e-05 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2267 | PYOCINKILLER | 33 | 0.002 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 78 | CMM_2312 | CMM_2319 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2312 | 4 | 10 | 3.438733 | putative tRNA/rRNA methyltransferase | |
| CMM_2313 | 2 | 9 | 2.748804 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate | |
| CMM_2314 | 3 | 9 | 2.918155 | putative transcriptional regulator, CarD family | |
| CMM_2315 | 2 | 13 | 0.994172 | hypothetical protein | |
| CMM_2316 | 2 | 10 | 0.905012 | putative two-component system response | |
| CMM_2317 | 1 | 10 | 0.816367 | putative two-component system sensor kinase | |
| CMM_2318 | 1 | 10 | 0.827721 | putative phosphate transport system regulator | |
| CMM_2319 | 2 | 11 | 0.621410 | phosphoglycerate mutase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2314 | ACETATEKNASE | 29 | 0.030 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2318 | NUCEPIMERASE | 167 | 4e-51 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2320 | DHBDHDRGNASE | 103 | 1e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2321 | BACINVASINB | 34 | 0.001 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
| 79 | CMM_2427 | CMM_2444 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2427 | -1 | 8 | -3.548955 | 50S ribosomal protein L16 | |
| CMM_2428 | -1 | 9 | -3.119761 | 30S ribosomal protein S3 | |
| CMM_2429 | -2 | 10 | -1.200105 | 50S ribosomal protein L22 | |
| CMM_2430 | -2 | 8 | 0.655126 | 30S ribosomal protein S19 | |
| CMM_2431 | -3 | 7 | -0.174798 | 50S ribosomal protein L2 | |
| CMM_2432 | -3 | 8 | -1.168445 | 50S ribosomal protein L23 | |
| CMM_2433 | -1 | 8 | -1.748878 | 50S ribosomal protein L4 | |
| CMM_2434 | -2 | 8 | -1.877143 | 50S ribosomal protein L3 | |
| CMM_2435 | -1 | 10 | -2.378210 | 30S ribosomal protein S10 | |
| CMM_2436 | -1 | 8 | -2.157033 | putative topoisomerase IB | |
| CMM_2437 | -3 | 5 | 0.104332 | elongation factor EF-Tu | |
| CMM_2438 | -2 | 3 | 0.501863 | elongation factor EF-G | |
| CMM_2439 | -2 | 5 | 1.717914 | 30S ribosomal protein S7 | |
| CMM_2440 | -1 | 6 | 1.370866 | 30S ribosomal protein S12 | |
| CMM_2441 | -2 | 7 | 0.696312 | hypothetical membrane protein | |
| CMM_2442 | -1 | 6 | 0.312448 | hypothetical membrane protein | |
| CMM_2443 | 0 | 9 | -1.201285 | putative polar amino acid ABC transporter, | |
| CMM_2444 | -1 | 9 | -1.382836 | putative polar amino acid ABC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2427 | SACTRNSFRASE | 41 | 6e-07 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2431 | adhesinmafb | 28 | 0.021 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2432 | TCRTETA | 29 | 0.022 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2433 | PF05616 | 29 | 0.009 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2434 | V8PROTEASE | 64 | 1e-13 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2437 | PF06580 | 31 | 0.006 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2438 | MALTOSEBP | 41 | 6e-06 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2443 | cloacin | 34 | 0.002 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2444 | PYOCINKILLER | 29 | 0.043 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
| 80 | CMM_2456 | CMM_2463 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2456 | 2 | 9 | 2.168205 | conserved hypothetical protein | |
| CMM_2457 | 1 | 7 | 2.330789 | hypothetical protein | |
| CMM_2458 | 0 | 7 | 2.634303 | conserved hypothetical protein | |
| CMM_2459 | -1 | 6 | 2.383597 | hypothetical protein | |
| CMM_2460 | -1 | 9 | 1.227970 | hypothetical protein | |
| CMM_2461 | 2 | 8 | 1.107312 | conserved hypothetical protein | |
| CMM_2462 | 3 | 10 | 1.311217 | putative ATP-dependent helicase | |
| CMM_2463 | 3 | 9 | 1.153939 | putative transcriptional regulator, TetR family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2456 | PF03309 | 30 | 0.017 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2457 | PF09025 | 28 | 0.046 | YopR Core | |
>PF09025#YopR Core | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2460 | RTXTOXIND | 31 | 0.017 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2463 | PF03544 | 40 | 9e-06 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| 81 | CMM_2531 | CMM_2536 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2531 | 0 | 8 | 0.426851 | putative acetyltransferase | |
| CMM_2532 | 1 | 7 | -0.539363 | conserved hypothetical protein | |
| CMM_2533 | 1 | 7 | -0.510882 | putative sugar ABC transporter, permease | |
| CMM_2534 | 2 | 6 | -0.083398 | putative sugar ABC transporter, permease | |
| CMM_2535 | 2 | 5 | -0.156268 | conserved membrane protein, putative | |
| CMM_2536 | -2 | 7 | -1.038935 | putative sugar ABC transporter, substrate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2531 | TCRTETA | 51 | 5e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2533 | ABC2TRNSPORT | 36 | 9e-05 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2535 | SUBTILISIN | 107 | 3e-27 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2536 | SUBTILISIN | 110 | 3e-28 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| 82 | CMM_2569 | CMM_2574 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2569 | 1 | 9 | 3.062511 | putative multidrug ABC transporter, permease | |
| CMM_2570 | 2 | 11 | 3.074535 | putative ABC transporter, ATP-binding protein | |
| CMM_2571 | 0 | 11 | 2.218935 | conserved hypothetical protein, putative | |
| CMM_2572 | -1 | 9 | 1.455862 | conserved hypothetical protein | |
| CMM_2573 | -2 | 8 | 0.938777 | putative zinc-dependant oxidoreductase | |
| CMM_2574 | -2 | 7 | -0.379629 | putative carboxylesterase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2569 | PF03309 | 29 | 0.032 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2571 | SACTRNSFRASE | 42 | 2e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2573 | ALARACEMASE | 278 | 3e-91 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2574 | ALARACEMASE | 284 | 9e-96 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| 83 | CMM_2844 | CMM_2850 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2844 | 6 | 20 | -6.248820 | ||
| CMM_2845 | 7 | 22 | -6.033275 | ||
| CMM_2846 | 6 | 21 | -5.159853 | ||
| CMM_2847 | 0 | 7 | -1.234716 | ||
| CMM_2848 | -2 | 7 | 0.306332 | ||
| CMM_2849 | -2 | 7 | 1.244714 | ||
| CMM_2850 | 3 | 9 | 3.318811 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2844 | TYPE4SSCAGA | 29 | 0.027 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2848 | DHBDHDRGNASE | 96 | 9e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2849 | RTXTOXINA | 31 | 0.014 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2850 | HELNAPAPROT | 28 | 0.005 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| 84 | CMM_2892 | CMM_2896 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| CMM_2892 | -1 | 11 | 1.714396 | ||
| CMM_2893 | 1 | 10 | 0.691648 | ||
| CMM_2894 | 0 | 10 | 0.634219 | ||
| CMM_2895 | -2 | 10 | -1.084056 | ||
| CMM_2896 | 7 | 34 | -9.341969 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2892 | ACRIFLAVINRP | 50 | 2e-08 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2893 | DHBDHDRGNASE | 107 | 2e-30 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2894 | HTHTETR | 57 | 3e-12 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| CMM_2896 | PREPILNPTASE | 28 | 0.030 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||