| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | VC_0021 | VC_0043 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0021 | 2 | 17 | 1.305102 | glycyl-tRNA synthetase, alpha chain | |
| VC_0022 | 0 | 17 | 2.304296 | conserved hypothetical protein | |
| VC_0023 | -1 | 20 | 4.223960 | NADH dehydrogenase subunit II-related protein | |
| VC_0024 | -1 | 21 | 4.629693 | conserved hypothetical protein | |
| VC_0025 | 0 | 21 | 4.439260 | hypothetical protein | |
| VC_0026 | 1 | 22 | 5.206679 | zinc-binding alcohol dehydrogenase | |
| VC_0027 | 1 | 19 | 5.406216 | threonine dehydratase | |
| VC_0028 | 1 | 17 | 5.236991 | dihydroxy-acid dehydratase | |
| VC_0029 | 1 | 16 | 4.104272 | branched-chain amino acid amiotransferase | |
| VC_0030 | 0 | 16 | 3.383566 | acetolactate synthase II, small subunit | |
| VC_0031 | -1 | 17 | 3.082867 | acetolactate synthase II, large subunit | |
| VC_0032 | -2 | 17 | 1.526471 | ComM-related protein | |
| VC_0033 | -1 | 17 | 0.321549 | conserved hypothetical protein | |
| VC_0034 | -1 | 16 | 0.558023 | thiol:disulfide interchange protein | |
| VC_0035 | -2 | 15 | 0.693359 | conserved hypothetical protein | |
| VC_0036 | -1 | 16 | 0.773127 | FixG-related protein | |
| VC_0037 | -2 | 17 | 1.579956 | conserved hypothetical protein | |
| VC_0038 | -3 | 17 | 2.620906 | hypothetical protein | |
| VC_0039 | -2 | 15 | 3.309433 | SpoOM-related protein | |
| VC_0040 | -1 | 16 | 3.338064 | hemolysin, putative | |
| VC_0041 | -2 | 17 | 3.502061 | conserved hypothetical protein | |
| VC_0042 | -2 | 17 | 3.387164 | potassium uptake protein TrkH | |
| VC_0043 | -2 | 13 | 3.410713 | potassium uptake protein TrkA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0024 | PF01206 | 96 | 3e-30 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0026 | NUCEPIMERASE | 31 | 0.007 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0032 | HTHFIS | 37 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0035 | MALTOSEBP | 29 | 0.022 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 2 | VC_0123 | VC_0129 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0123 | 0 | 18 | 3.081498 | cyaY protein | |
| VC_0125 | -2 | 22 | 3.465918 | diaminopimelate decarboxylase | |
| VC_0126 | -1 | 24 | 4.020099 | diaminopimelate epimerase | |
| VC_0127 | -2 | 22 | 4.113370 | conserved hypothetical protein | |
| VC_0128 | -3 | 21 | 3.947032 | integrase/recombinase XerC | |
| VC_0129 | -3 | 20 | 3.451027 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0123 | MALTOSEBP | 26 | 0.024 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| 3 | VC_0451 | VC_0469 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0451 | 2 | 20 | 3.147618 | conserved hypothetical protein | |
| VC_0452 | 2 | 21 | 3.131919 | A/G-specific adenine glycosylase | |
| VC_0453 | 1 | 23 | 3.261712 | conserved hypothetical protein | |
| VC_0454 | 1 | 23 | 3.224413 | glutaminase family protein | |
| VC_0455 | 2 | 25 | 3.971797 | oxygen-independent coproporphyrinogen III | |
| VC_0456 | 3 | 22 | 3.444239 | HAM1 protein | |
| VC_0457 | 1 | 18 | 2.482494 | hypothetical protein | |
| VC_0458 | 3 | 17 | 2.777069 | conserved hypothetical protein | |
| VC_0459 | 3 | 18 | 2.738495 | conserved hypothetical protein | |
| VC_0460 | 4 | 19 | 2.632382 | pyrroline-5-carboxylate reductase | |
| VC_0461 | 4 | 20 | 2.124376 | conserved hypothetical protein | |
| VC_0462 | 3 | 22 | 2.341061 | twitching motility protein PilT | |
| VC_0463 | 2 | 21 | 2.475822 | twitching motility protein PilT | |
| VC_0464 | 0 | 19 | 2.586708 | transcriptional regulator, LuxR family | |
| VC_0465 | 0 | 18 | 2.309784 | tyrosyl-tRNA synthetase | |
| VC_0466 | -1 | 17 | 2.254523 | conserved hypothetical protein | |
| VC_0467 | -2 | 16 | 2.093623 | conserved hypothetical protein | |
| VC_0468 | -2 | 22 | 3.064761 | glutathione synthetase | |
| VC_0469 | -1 | 20 | 3.325769 | conserved hypothetical protein |
| 4 | VC_0479 | VC_0515 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0479 | 0 | 18 | -3.071491 | hypothetical protein | |
| VC_0480 | 1 | 20 | -2.072306 | conserved hypothetical protein | |
| VC_0481 | 3 | 17 | -2.062882 | LysE/YggA family protein | |
| VC_0482 | 1 | 17 | -0.907316 | chromosome initiation inhibitor | |
| VC_0483 | 0 | 17 | -0.298038 | conserved hypothetical protein | |
| VC_0484 | -2 | 14 | -0.054862 | hypothetical protein | |
| VC_0485 | 0 | 15 | -2.337381 | pyruvate kinase I | |
| VC_0486 | 1 | 16 | -3.399575 | transcriptional regulator, DeoR family | |
| VC_0487 | 2 | 20 | -4.458999 | glucosamine--fructose-6-phosphate | |
| VC_0488 | 5 | 26 | -6.403944 | extracellular solute-binding protein, putative | |
| VC_0489 | 8 | 31 | -7.538401 | hemolysin, putative | |
| VC_0490 | 12 | 34 | -9.304069 | conserved hypothetical protein | |
| VC_0491 | 11 | 29 | -8.217272 | hypothetical protein | |
| VC_0492 | 10 | 28 | -7.265687 | hypothetical protein | |
| VC_0493 | 9 | 26 | -5.381089 | hypothetical protein | |
| VC_0494 | 10 | 28 | -4.616948 | conserved hypothetical protein | |
| VC_0495 | 7 | 25 | -4.528903 | conserved hypothetical protein | |
| VC_0496 | 5 | 26 | -4.724720 | hypothetical protein | |
| VC_0497 | 4 | 27 | -3.686238 | transcriptional regulator | |
| VC_0498 | 3 | 24 | -2.991958 | ribonuclease HI, putative | |
| VC_0502 | 3 | 24 | -3.216066 | type IV pilin, putative | |
| VC_0503 | 3 | 21 | -2.427415 | conserved hypothetical protein | |
| VC_0504 | 5 | 23 | -1.183397 | hypothetical protein | |
| VC_0505 | 4 | 25 | -0.875691 | hypothetical protein | |
| VC_0506 | 4 | 22 | -1.918024 | hypothetical protein | |
| VC_0507 | 5 | 25 | -3.624044 | hypothetical protein | |
| VC_0508 | 4 | 30 | -7.208836 | hypothetical protein | |
| VC_0509 | 5 | 37 | -9.711169 | hypothetical protein | |
| VC_0510 | 6 | 41 | -11.237815 | DNA repair protein RadC-related protein | |
| VC_0511 | 6 | 43 | -11.390594 | hypothetical protein | |
| VC_0512 | 4 | 35 | -9.047828 | methyl-accepting chemotaxis protein | |
| VC_0513 | 5 | 35 | -9.386154 | transcriptional regulator, AraC/XylS family | |
| VC_0514 | 5 | 33 | -7.668911 | methyl-accepting chemotaxis protein | |
| VC_0515 | 3 | 23 | -4.634780 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0492 | LIPPROTEIN48 | 32 | 0.005 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0502 | BCTERIALGSPG | 46 | 5e-09 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0514 | CHANLCOLICIN | 38 | 1e-04 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 5 | VC_0596 | VC_0601 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0596 | 1 | 17 | 3.849394 | dnaK suppressor protein | |
| VC_0597 | 0 | 17 | 3.936882 | sugar fermentation stimulation protein | |
| VC_0598 | -1 | 16 | 3.650018 | hypothetical protein | |
| VC_0599 | -2 | 13 | 3.557954 | hypothetical protein | |
| VC_0600 | -2 | 13 | 3.422994 | hypothetical protein | |
| VC_0601 | -2 | 13 | 3.253859 | ATP-dependent helicase HrpB |
| 6 | VC_0630 | VC_0644 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0630 | 2 | 18 | -1.873283 | conserved hypothetical protein | |
| VC_0631 | 2 | 21 | -1.856067 | tyrosyl-tRNA synthetase | |
| VC_0632 | 2 | 23 | -1.610466 | D-alanyl-D-alanine | |
| VC_0633 | 1 | 27 | -2.017272 | outer membrane protein OmpU | |
| VC_0634 | -1 | 19 | -1.588381 | transcription elongation factor GreA | |
| VC_0635 | 0 | 20 | -1.498688 | conserved hypothetical protein | |
| VC_0636 | 0 | 21 | -1.469684 | cell division protein FtsJ | |
| VC_0637 | 1 | 21 | -1.012346 | cell division protein FtsH | |
| VC_0638 | 2 | 25 | -0.387363 | dihydropteroate synthase | |
| VC_0639 | 3 | 29 | -0.089556 | phosphoglucomutase/phosphomannomutase family | |
| VC_0640 | 5 | 30 | 0.538568 | preprotein translocase, SecG subunit | |
| VC_0641 | 6 | 32 | 0.685874 | **conserved hypothetical protein | |
| VC_0642 | 6 | 37 | 1.130050 | N utilization substance protein A | |
| VC_0643 | 6 | 32 | 1.478257 | initiation factor IF-2 | |
| VC_0644 | 4 | 26 | 1.302838 | ribosome-binding factor A |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0632 | BLACTAMASEA | 30 | 0.024 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0633 | ECOLIPORIN | 83 | 1e-19 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0637 | HTHFIS | 36 | 6e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0640 | SECGEXPORT | 137 | 1e-45 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0643 | TCRTETOQM | 74 | 1e-15 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| 7 | VC_0788 | VC_0845 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0788 | 2 | 17 | 1.599214 | DOPA-dioxygenase-related protein | |
| VC_0789 | 1 | 17 | 1.419066 | hypothetical protein | |
| VC_0790 | 2 | 15 | 0.934092 | transcriptional regulator CitB | |
| VC_0791 | 2 | 16 | 1.300413 | sensor kinase citA | |
| VC_0792 | 2 | 16 | 2.110205 | oxaloacetate decarboxylase, beta subunit | |
| VC_0794 | 2 | 17 | 2.239947 | hypothetical protein | |
| VC_0795 | 2 | 16 | 2.690313 | citrate/sodium symporter | |
| VC_0796 | 3 | 17 | 3.278853 | citrate (pro-3S)-lyase ligase | |
| VC_0797 | 2 | 19 | 4.509895 | citrate lyase, gamma subunit | |
| VC_0798 | 3 | 20 | 4.377289 | citrate lyase, beta subunit | |
| VC_0799 | 2 | 20 | 3.866247 | citrate lyase, alpha subunit | |
| VC_0800 | 3 | 21 | 3.604082 | citX protein | |
| VC_0801 | 1 | 20 | 3.546504 | citG protein | |
| VC_0802 | 0 | 24 | 2.794643 | hypothetical protein | |
| VC_0803 | 1 | 24 | 2.675491 | RNA methyltransferase, TrmH family | |
| VC_0804 | -1 | 18 | 1.565329 | ferredoxin | |
| VC_0805 | -1 | 14 | -0.165659 | hypothetical protein | |
| VC_0806 | -1 | 11 | -2.186602 | conserved hypothetical protein | |
| VC_0807 | -1 | 17 | -4.755570 | hypothetical protein | |
| VC_0808 | -1 | 21 | -5.120199 | hypothetical protein | |
| VC_0809 | -1 | 21 | -5.022136 | hypothetical protein | |
| VC_0810 | 2 | 28 | -6.666582 | hypothetical protein | |
| VC_0811 | 2 | 28 | -6.161855 | hypothetical protein | |
| VC_0812 | 3 | 26 | -4.731851 | helicase-related protein | |
| VC_0813 | 6 | 33 | -7.215587 | tellurite resistance protein-related protein | |
| VC_0814 | 8 | 41 | -11.047405 | transcriptional regulator, putative | |
| VC_0815 | 9 | 43 | -12.662084 | hypothetical protein | |
| VC_0816 | 9 | 47 | -14.436741 | hypothetical protein | |
| VC_0817 | 10 | 48 | -14.354400 | transposase, putative | |
| VC_0819 | 9 | 50 | -15.139624 | aldehyde dehydrogenase | |
| VC_0820 | 9 | 47 | -14.673290 | ToxR-activated gene A protein | |
| VC_0821 | 7 | 45 | -13.848971 | hypothetical protein | |
| VC_0822 | 6 | 43 | -12.590953 | inner membrane protein, putative | |
| VC_0823 | 2 | 39 | -9.721847 | hypothetical protein | |
| VC_0824 | 1 | 36 | -8.750347 | tagD protein | |
| VC_0825 | 0 | 35 | -9.037530 | toxin co-regulated pilus biosynthesis protein I | |
| VC_0826 | 2 | 38 | -9.656725 | toxin co-regulated pilus biosynthesis protein P | |
| VC_0827 | 3 | 38 | -10.389866 | toxin co-regulated pilus biosynthesis protein H | |
| VC_0828 | 4 | 38 | -11.902766 | toxin co-regulated pilin | |
| VC_0829 | 5 | 38 | -13.320171 | toxin co-regulated pilus biosynthesis protein B | |
| VC_0830 | 5 | 41 | -14.372237 | toxin co-regulated pilus biosynthesis protein Q | |
| VC_0831 | 6 | 40 | -14.221059 | toxin co-regulated pilus biosynthesis outer | |
| VC_0832 | 6 | 42 | -14.516971 | toxin co-regulated pilus biosynthesis protein R | |
| VC_0833 | 6 | 43 | -14.862562 | toxin co-regulated pilus biosynthesis protein D | |
| VC_0834 | 5 | 44 | -14.665095 | toxin co-regulated pilus biosynthesis protein S | |
| VC_0835 | 6 | 43 | -14.324360 | toxin co-regulated pilus biosynthesis protein T | |
| VC_0836 | 5 | 44 | -14.568744 | toxin co-regulated pilus biosynthesis protein E | |
| VC_0837 | 5 | 46 | -15.194678 | toxin co-regulated pilus biosynthesis protein F | |
| VC_0838 | 6 | 43 | -15.252667 | TCP pilus virulence regulatory protein | |
| VC_0839 | 5 | 43 | -14.730220 | leader peptidase TcpJ | |
| VC_0840 | 7 | 42 | -12.116948 | accessory colonization factor AcfB | |
| VC_0841 | 6 | 37 | -10.213520 | accessory colonization factor AcfC | |
| VC_0842 | 5 | 33 | -9.452941 | conserved hypothetical protein | |
| VC_0843 | 4 | 31 | -8.493174 | tagE protein | |
| VC_0844 | 4 | 29 | -7.566229 | accessory colonization factor AcfA | |
| VC_0845 | 3 | 26 | -6.517032 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0790 | HTHFIS | 80 | 1e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0791 | PF06580 | 37 | 1e-04 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0796 | LPSBIOSNTHSS | 46 | 3e-08 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0828 | PF05946 | 312 | e-111 | Toxin-coregulated pilus subunit TcpA | |
>PF05946#Toxin-coregulated pilus subunit TcpA | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0829 | FLGBIOSNFLIP | 29 | 0.033 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0831 | BCTERIALGSPD | 41 | 8e-06 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0836 | BCTERIALGSPF | 66 | 4e-14 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0837 | PF06340 | 568 | 0.0 | Vibrio cholerae toxin co-regulated pilus biosynthesis pr... | |
>PF06340#Vibrio cholerae toxin co-regulated pilus biosynthesis | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0839 | PREPILNPTASE | 227 | 1e-76 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0844 | OMPADOMAIN | 51 | 7e-10 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| 8 | VC_0917 | VC_0929 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0917 | -1 | 21 | -3.018109 | UDP-N-acetylglucosamine 2-epimerase | |
| VC_0918 | 0 | 24 | -3.634247 | UDP-N-acetyl-D-mannosaminuronic acid | |
| VC_0919 | 2 | 26 | -3.981385 | serine acetyltransferase-related protein | |
| VC_0920 | 0 | 25 | -3.899636 | exopolysaccharide biosynthesis protein EpsF, | |
| VC_0921 | 0 | 24 | -3.100418 | polysaccharide export protein, putative | |
| VC_0922 | -1 | 24 | -2.571078 | hypothetical protein | |
| VC_0923 | -1 | 22 | -2.657714 | serine acetyltransferase-related protein | |
| VC_0924 | -1 | 21 | -4.635375 | capK protein, putative | |
| VC_0925 | -1 | 19 | -3.780728 | polysaccharide biosynthesis protein, putative | |
| VC_0926 | 0 | 15 | -4.006978 | hypothetical protein | |
| VC_0927 | 1 | 16 | -4.146482 | UDP-N-acetyl-D-mannosamine transferase | |
| VC_0928 | 0 | 16 | -4.296643 | hypothetical protein | |
| VC_0929 | 0 | 13 | -3.684125 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0918 | NUCEPIMERASE | 29 | 0.046 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0926 | PF06917 | 29 | 0.029 | Periplasmic pectate lyase | |
>PF06917#Periplasmic pectate lyase | |||||
| 9 | VC_0961 | VC_0973 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0961 | 2 | 22 | 0.001913 | phoH family protein | |
| VC_0962 | 2 | 24 | -0.549402 | conserved hypothetical protein | |
| VC_0963 | 1 | 23 | -1.543244 | VisC-related protein | |
| VC_0964 | 2 | 29 | -2.444952 | PTS system, glucose-specific IIA component | |
| VC_0965 | 2 | 20 | -1.980681 | phosphoenolpyruvate-protein phosphotransferase | |
| VC_0966 | 1 | 14 | -1.179920 | phosphocarrier protein HPr | |
| VC_0967 | -1 | 17 | -1.504798 | hypothetical protein | |
| VC_0968 | -1 | 17 | -2.083754 | cysteine synthase A | |
| VC_0969 | -1 | 14 | -1.870437 | cysZ protein | |
| VC_0970 | -2 | 15 | -1.801877 | cell division protein ZipA | |
| VC_0971 | -1 | 18 | -2.215164 | DNA ligase | |
| VC_0972 | 0 | 20 | -3.222211 | porin, putative | |
| VC_0973 | 0 | 21 | -3.503063 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0965 | PHPHTRNFRASE | 762 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0969 | ACRIFLAVINRP | 29 | 0.018 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0970 | TONBPROTEIN | 32 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0972 | ECOLNEIPORIN | 59 | 8e-12 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| 10 | VC_0993 | VC_0998 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0993 | 3 | 16 | -0.115805 | N-acetylglucosamine repressor | |
| VC_0994 | 3 | 16 | 0.242138 | N-acetylglucosamine-6-phosphate deacetylase | |
| VC_0995 | 3 | 16 | 0.674080 | PTS system, N-acetylglucosamine-specific IIABC | |
| VC_0996 | 2 | 15 | 0.931808 | hypothetical protein | |
| VC_0997 | 2 | 14 | 0.896065 | glutaminyl-tRNA synthetase | |
| VC_0998 | 3 | 15 | 1.252011 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0998 | IGASERPTASE | 45 | 3e-06 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 11 | VC_1274 | VC_1280 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1274 | 2 | 11 | -0.156409 | conserved hypothetical protein | |
| VC_1275 | 3 | 11 | -0.600830 | conserved hypothetical protein | |
| VC_1276 | 2 | 12 | -1.505228 | sensor histidine kinase | |
| VC_1277 | 3 | 14 | -1.715570 | transcriptional regulator, LuxR family | |
| VC_1278 | 3 | 15 | -2.037191 | transcriptional regulator, MarR family | |
| VC_1279 | 2 | 16 | -2.291971 | transporter, BCCT family | |
| VC_1280 | 1 | 18 | -3.161760 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1276 | PF06580 | 38 | 8e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1277 | HTHFIS | 69 | 5e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 12 | VC_1321 | VC_1338 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1321 | 2 | 13 | -0.533006 | hypothetical protein | |
| VC_1322 | 1 | 15 | -1.847351 | conserved hypothetical protein | |
| VC_1323 | 1 | 15 | -1.539326 | hypothetical protein | |
| VC_1324 | 0 | 15 | -2.777078 | hypothetical protein | |
| VC_1325 | 2 | 13 | -3.626192 | galactoside ABC transporter, periplasmic | |
| VC_1326 | 3 | 13 | -4.976122 | hypothetical protein | |
| VC_1327 | 2 | 14 | -2.531960 | galactoside ABC transporter, ATP-binding | |
| VC_1328 | 1 | 18 | -2.376011 | galactoside ABC transporter, permease protein | |
| VC_1329 | 1 | 18 | -1.359208 | opacity protein-related protein | |
| VC_1330 | 1 | 18 | 0.243291 | hypothetical protein | |
| VC_1331 | -1 | 20 | 2.816103 | hypothetical protein | |
| VC_1332 | -1 | 18 | 3.338936 | conserved hypothetical protein | |
| VC_1333 | 1 | 19 | 4.382728 | hypothetical protein | |
| VC_1334 | 2 | 20 | 4.980529 | conserved hypothetical protein | |
| VC_1335 | 3 | 21 | 5.054112 | transcriptional regulator, GntR family | |
| VC_1336 | 2 | 21 | 4.971790 | carboxyphosphonoenolpyruvate phosphonomutase | |
| VC_1337 | 0 | 18 | 4.216635 | methylcitrate synthase | |
| VC_1338 | 0 | 16 | 3.758404 | aconitate hydratase 1 |
| 13 | VC_1377 | VC_1403 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1377 | 2 | 16 | 1.627878 | conserved hypothetical protein | |
| VC_1378 | 2 | 17 | 1.744519 | hypothetical protein | |
| VC_1379 | 1 | 18 | 1.868637 | hypothetical protein | |
| VC_1380 | 1 | 18 | 1.763981 | hypothetical protein | |
| VC_1381 | 2 | 17 | 2.367291 | hypothetical protein | |
| VC_1382 | 2 | 18 | 2.354568 | ATP-dependent helicase HrpA | |
| VC_1383 | -1 | 18 | 2.514183 | hypothetical protein | |
| VC_1384 | -1 | 18 | 2.594877 | hypothetical protein | |
| VC_1385 | 0 | 21 | 3.400243 | hypothetical protein | |
| VC_1386 | -1 | 20 | 3.683307 | heat shock protein 70 family protein | |
| VC_1387 | 1 | 19 | 3.892497 | hypothetical protein | |
| VC_1388 | 1 | 19 | 3.842338 | lipoate-protein ligase A | |
| VC_1389 | 0 | 17 | 1.983727 | hypothetical protein | |
| VC_1390 | 0 | 17 | 1.707266 | transcriptional regulator, LysR family | |
| VC_1391 | -3 | 15 | 0.035149 | multidrug transporter, putative | |
| VC_1392 | 0 | 17 | -1.189751 | deoxyribodipyrimidine photolyase, putative | |
| VC_1393 | 1 | 19 | -4.014276 | sugE protein | |
| VC_1394 | 2 | 19 | -4.162151 | methyl-accepting chemotaxis protein | |
| VC_1396 | 0 | 20 | -2.946260 | hypothetical protein | |
| VC_1397 | 1 | 19 | -3.038518 | chemotaxis protein CheA | |
| VC_1398 | 0 | 20 | -3.442485 | chemotaxis protein CheY | |
| VC_1399 | -1 | 20 | -3.748288 | chemotaxis protein methyltransferase CheR | |
| VC_1400 | 1 | 20 | -3.218057 | hypothetical protein | |
| VC_1401 | 0 | 20 | -3.326279 | protein-glutamate methylesterase CheB | |
| VC_1402 | -1 | 17 | -3.232744 | purine-binding chemotaxis protein Chew, | |
| VC_1403 | 1 | 18 | -3.211288 | methyl-accepting chemotaxis protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1384 | OMPADOMAIN | 58 | 6e-13 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1386 | SHAPEPROTEIN | 49 | 1e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1391 | TCRTETB | 121 | 5e-32 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1392 | TACYTOLYSIN | 30 | 0.019 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1397 | PF06580 | 33 | 0.005 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1398 | HTHFIS | 68 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1401 | HTHFIS | 72 | 7e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1402 | BINARYTOXINB | 30 | 0.027 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| 14 | VC_1414 | VC_1441 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1414 | -1 | 14 | -3.027824 | thermostable carboxypeptidase 1 | |
| VC_1415 | 1 | 18 | -4.056886 | hcp protein | |
| VC_1416 | 1 | 19 | -4.355368 | vgrG protein | |
| VC_1417 | 2 | 24 | -6.135968 | hypothetical protein | |
| VC_1418 | 2 | 24 | -6.166712 | hypothetical protein | |
| VC_1419 | 2 | 17 | -4.554096 | hypothetical protein | |
| VC_1420 | 1 | 16 | -3.116917 | hypothetical protein | |
| VC_1421 | 0 | 16 | -2.443981 | conserved hypothetical protein | |
| VC_1422 | -1 | 18 | -2.456980 | sodium/alanine symporter | |
| VC_1423 | 1 | 20 | -3.638549 | hypothetical protein | |
| VC_1424 | -1 | 20 | -3.630835 | spermidine/putrescine ABC transporter, | |
| VC_1425 | -1 | 18 | -3.839495 | spermidine/putrescine ABC transporter, | |
| VC_1426 | -2 | 13 | -3.997099 | spermidine/putrescine ABC transporter, permease | |
| VC_1427 | -2 | 11 | -4.087681 | spermidine/putrescine ABC transporter, permease | |
| VC_1428 | -1 | 13 | -3.776897 | spermidine/putrescine ABC transporter, | |
| VC_1429 | -1 | 12 | -4.048502 | hypothetical protein | |
| VC_1430 | 0 | 13 | -3.050333 | bax protein, putative | |
| VC_1431 | 0 | 13 | -2.879972 | hypothetical protein | |
| VC_1432 | -1 | 15 | -2.174823 | conserved hypothetical protein | |
| VC_1433 | -1 | 16 | -2.151496 | conserved hypothetical protein | |
| VC_1434 | -2 | 16 | -2.210930 | fumarate and nitrate reduction regulatory | |
| VC_1435 | -1 | 17 | -1.881954 | conserved hypothetical protein | |
| VC_1436 | -1 | 19 | -2.591760 | FixS-related protein | |
| VC_1437 | 1 | 19 | -2.027122 | cation transport ATPase, E1-E2 family | |
| VC_1438 | 3 | 22 | -2.262752 | hypothetical protein | |
| VC_1439 | 2 | 20 | -2.700606 | cytochrome c oxidase, subunit CcoP | |
| VC_1440 | 2 | 21 | -4.874766 | cytochrome c oxidase, subunit CcoQ | |
| VC_1441 | 0 | 16 | -3.092269 | cytochrome c oxidase, subunit CcoO |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1416 | PF03544 | 39 | 6e-05 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1423 | cloacin | 30 | 0.010 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1424 | MALTOSEBP | 28 | 0.048 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1425 | MYCMG045 | 40 | 9e-06 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1430 | FLGFLGJ | 29 | 0.025 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| 15 | VC_1452 | VC_1486 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1452 | 6 | 33 | -7.445087 | RstC protein | |
| VC_1453 | 3 | 27 | -4.844479 | RstB1 protein | |
| VC_1454 | 4 | 28 | -4.938306 | RstA1 protein | |
| VC_1455 | 5 | 27 | -3.894152 | transcriptional repressor RstR | |
| VC_1456 | 3 | 26 | -3.177454 | cholera enterotoxin, B subunit | |
| VC_1457 | 3 | 24 | -2.080501 | cholera enterotoxin, A subunit | |
| VC_1458 | 1 | 25 | -0.878016 | zona occludens toxin | |
| VC_1459 | 3 | 26 | -2.361074 | accessory cholera enterotoxin | |
| VC_1460 | 2 | 24 | -1.918216 | hypothetical protein | |
| VC_1461 | 0 | 21 | -2.971996 | colonization factor | |
| VC_1462 | -1 | 20 | -2.054330 | RstB2 protein | |
| VC_1463 | -1 | 23 | -1.839495 | RstA2 protein | |
| VC_1464 | 1 | 24 | -0.551045 | transcriptional repressor RstR | |
| VC_1465 | 2 | 25 | -0.042878 | hypothetical protein | |
| VC_1466 | 2 | 27 | -0.135791 | hypothetical protein | |
| VC_1467 | 3 | 25 | 0.373779 | hypothetical protein | |
| VC_1468 | 2 | 28 | -0.177878 | conserved hypothetical protein | |
| VC_1469 | 2 | 28 | 0.188658 | phage replication protein Cri | |
| VC_1471 | 2 | 26 | -0.616346 | hypothetical protein | |
| VC_1472 | 1 | 22 | -0.922194 | hypothetical protein | |
| VC_1473 | 1 | 22 | -1.767248 | hypothetical protein | |
| VC_1474 | 1 | 23 | -2.735449 | conserved hypothetical protein | |
| VC_1475 | 0 | 22 | -3.497742 | phage replication protein Cri | |
| VC_1477 | 3 | 25 | -5.463972 | transposase OrfAB, subunit A | |
| VC_1478 | 1 | 24 | -5.273921 | transposase OrfAB, subunit B | |
| VC_1479 | 3 | 23 | -5.500294 | hypothetical protein | |
| VC_1480 | 0 | 21 | -4.111306 | hypothetical protein | |
| VC_1481 | 0 | 20 | -3.854612 | conserved hypothetical protein | |
| VC_1482 | -1 | 20 | -3.639957 | ATP-dependent protease LA-related protein | |
| VC_1483 | -1 | 18 | -2.881124 | 3-hydroxydecanoyl-(acyl-carrier-protein) | |
| VC_1484 | -1 | 18 | -3.044708 | ribosome modulation factor | |
| VC_1485 | -1 | 17 | -3.088744 | hypothetical protein | |
| VC_1486 | 0 | 16 | -3.203618 | ABC transporter, ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1456 | ENTEROTOXINB | 239 | 7e-86 | Heat labile enterotoxin B chain signature. | |
>ENTEROTOXINB#Heat labile enterotoxin B chain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1457 | ENTEROTOXINA | 471 | e-173 | Heat-labile enterotoxin A chain signature. | |
>ENTEROTOXINA#Heat-labile enterotoxin A chain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1486 | PF05272 | 30 | 0.050 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 16 | VC_1567 | VC_1573 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1567 | 2 | 19 | 1.736920 | conserved hypothetical protein | |
| VC_1568 | 2 | 19 | 1.960859 | ABC transporter, ATP-binding protein | |
| VC_1569 | 3 | 20 | 1.541541 | hypothetical protein | |
| VC_1570 | 3 | 20 | 1.321404 | quinol oxidase, subunit II | |
| VC_1571 | 2 | 20 | 0.684650 | quinol oxidase, subunit I | |
| VC_1572 | 2 | 18 | -0.337272 | hypothetical protein | |
| VC_1573 | 2 | 19 | -0.668853 | fumarate hydratase, class II |
| 17 | VC_1747 | VC_1808 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1747 | 1 | 19 | -3.347518 | hypothetical protein | |
| VC_1748 | 0 | 17 | -3.061474 | hypothetical protein | |
| VC_1749 | 0 | 17 | -3.130837 | hypothetical protein | |
| VC_1750 | 1 | 18 | -2.784381 | hypothetical protein | |
| VC_1751 | -1 | 15 | -1.411160 | conserved hypothetical protein | |
| VC_1752 | -1 | 16 | 1.126317 | hypothetical protein | |
| VC_1753 | -1 | 14 | 0.481493 | paraquat-inducible protein A | |
| VC_1754 | -1 | 11 | -1.151219 | paraquat-inducible protein B | |
| VC_1755 | -1 | 12 | -1.366021 | conserved hypothetical protein | |
| VC_1756 | -1 | 14 | -2.355632 | periplasmic linker protein, putative | |
| VC_1757 | 0 | 19 | -3.361670 | transporter, AcrB/D/F family | |
| VC_1758 | 3 | 33 | -6.940356 | *integrase, phage family | |
| VC_1760 | 3 | 29 | -6.688972 | helicase, putative | |
| VC_1761 | 3 | 26 | -6.211379 | hypothetical protein | |
| VC_1762 | 2 | 24 | -5.731537 | hypothetical protein | |
| VC_1763 | 2 | 22 | -5.723999 | chemotaxis protein MotB-related protein | |
| VC_1764 | 2 | 19 | -5.327445 | hypothetical protein | |
| VC_1765 | 1 | 20 | -5.250386 | type I restriction enzyme HsdR, putative | |
| VC_1766 | 2 | 20 | -5.658193 | conserved hypothetical protein | |
| VC_1767 | 1 | 19 | -5.606399 | conserved hypothetical protein | |
| VC_1768 | 2 | 22 | -6.499162 | conserved hypothetical protein | |
| VC_1769 | 2 | 22 | -6.367183 | DNA methylase HsdM, putative | |
| VC_1770 | 2 | 28 | -6.702756 | hypothetical protein | |
| VC_1771 | 1 | 29 | -6.570125 | hypothetical protein | |
| VC_1772 | 2 | 30 | -5.892457 | hypothetical protein | |
| VC_1773 | 2 | 32 | -6.365798 | conserved hypothetical protein | |
| VC_1774 | 0 | 27 | -4.811054 | conserved hypothetical protein | |
| VC_1775 | -1 | 25 | -4.950606 | conserved hypothetical protein | |
| VC_1776 | -2 | 23 | -4.408566 | N-acetylneuraminate lyase, putative | |
| VC_1777 | -2 | 22 | -4.054410 | conserved hypothetical protein | |
| VC_1778 | -1 | 23 | -4.187179 | conserved hypothetical protein | |
| VC_1779 | 0 | 22 | -3.542990 | C4-dicarboxylate-binding periplasmic protein | |
| VC_1780 | 0 | 23 | -3.532656 | hypothetical protein | |
| VC_1781 | 0 | 23 | -2.656367 | conserved hypothetical protein | |
| VC_1782 | 1 | 22 | -2.867511 | ROK family protein | |
| VC_1783 | 2 | 24 | -3.117568 | N-acetylglucosamine-6-phosphate deacetylase | |
| VC_1784 | 2 | 24 | -3.195673 | neuraminidase | |
| VC_1785 | 5 | 31 | -3.510547 | transcriptional regulator | |
| VC_1786 | 5 | 29 | -3.718113 | DNA repair protein RadC, putative | |
| VC_1787 | 5 | 31 | -4.495929 | hypothetical protein | |
| VC_1788 | 4 | 31 | -5.039964 | hypothetical protein | |
| VC_1789 | 3 | 28 | -5.890203 | transposase OrfAB, subunit B | |
| VC_1790 | 3 | 31 | -6.848754 | transposase OrfAB, subunit A | |
| VC_1791 | 3 | 30 | -7.255779 | conserved hypothetical protein | |
| VC_1792 | 4 | 30 | -8.687979 | conserved hypothetical protein | |
| VC_1793 | 4 | 28 | -7.298325 | hypothetical protein | |
| VC_1794 | 2 | 25 | -4.599842 | hypothetical protein | |
| VC_1795 | 2 | 25 | -3.819653 | transcriptional regulator, putative | |
| VC_1796 | 1 | 25 | -4.167449 | middle operon regulator-related protein | |
| VC_1797 | 1 | 24 | -4.088955 | hypothetical protein | |
| VC_1798 | 1 | 25 | -4.048502 | eha protein | |
| VC_1799 | 1 | 23 | -3.823262 | hypothetical protein | |
| VC_1800 | 3 | 25 | -5.723138 | hypothetical protein | |
| VC_1801 | 3 | 25 | -6.021399 | hypothetical protein | |
| VC_1802 | 5 | 29 | -8.545020 | hypothetical protein | |
| VC_1803 | 5 | 26 | -7.955472 | hypothetical protein | |
| VC_1804 | 4 | 23 | -7.755886 | hypothetical protein | |
| VC_1805 | 4 | 24 | -7.550167 | hypothetical protein | |
| VC_1806 | 3 | 23 | -7.518601 | hypothetical protein | |
| VC_1808 | 3 | 26 | -8.601399 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1748 | IGASERPTASE | 30 | 0.011 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1756 | RTXTOXIND | 49 | 2e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1757 | ACRIFLAVINRP | 471 | e-152 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1763 | OMPADOMAIN | 30 | 0.007 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1764 | TYPE4SSCAGA | 32 | 0.008 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1782 | PF03309 | 28 | 0.034 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| 18 | VC_1832 | VC_1839 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1832 | 2 | 20 | -1.924216 | hypothetical protein | |
| VC_1833 | 2 | 20 | -2.054808 | quinolinate synthetase A | |
| VC_1834 | 2 | 21 | -2.163517 | conserved hypothetical protein | |
| VC_1835 | 2 | 21 | -2.560835 | peptidoglycan-associated lipoprotein | |
| VC_1836 | 0 | 20 | -2.609199 | tolB protein | |
| VC_1837 | 3 | 20 | -2.523421 | tolA protein | |
| VC_1838 | 2 | 18 | -2.529820 | tolR membrane protein | |
| VC_1839 | 2 | 18 | -1.773918 | tolQ protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1835 | OMPADOMAIN | 103 | 3e-29 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1837 | IGASERPTASE | 65 | 1e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1838 | adhesinmafb | 27 | 0.028 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 19 | VC_1848 | VC_1853 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1848 | 0 | 19 | -4.485959 | cysteinyl-tRNA synthetase | |
| VC_1849 | 1 | 25 | -5.756678 | peptidyl-prolyl cis-trans isomerase B | |
| VC_1850 | 0 | 23 | -4.639198 | conserved hypothetical protein | |
| VC_1851 | 1 | 20 | -3.871015 | conserved hypothetical protein | |
| VC_1852 | 0 | 21 | -3.482394 | conserved hypothetical protein | |
| VC_1853 | 0 | 21 | -3.246331 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1852 | SECA | 52 | 9e-11 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 20 | VC_1907 | VC_1919 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1907 | -1 | 14 | -3.342091 | cys regulon transcriptional activator | |
| VC_1908 | -2 | 14 | -3.925761 | hypothetical protein | |
| VC_1909 | -1 | 14 | -3.630796 | hypothetical protein | |
| VC_1910 | 4 | 27 | -2.540349 | tRNA-(MS[2]IO[6]A)-hydroxylase | |
| VC_1911 | 4 | 29 | -1.625627 | orotidine 5`-phosphate decarboxylase | |
| VC_1912 | 6 | 30 | -1.894293 | conserved hypothetical protein | |
| VC_1913 | 6 | 31 | -1.817508 | conserved hypothetical protein | |
| VC_1914 | 7 | 33 | -1.420615 | integration host factor, beta subunit | |
| VC_1915 | 5 | 24 | -0.774521 | ribosomal protein S1 | |
| VC_1916 | 2 | 15 | -0.504686 | cytidylate kinase | |
| VC_1917 | 2 | 15 | -0.765254 | conserved hypothetical protein | |
| VC_1918 | 3 | 21 | -0.666751 | peptidyl-prolyl cis-trans isomerse D | |
| VC_1919 | 3 | 21 | -0.463426 | DNA-binding protein HU-beta |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1914 | DNABINDINGHU | 118 | 1e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1919 | DNABINDINGHU | 120 | 1e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 21 | VC_1968 | VC_1985 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1968 | -2 | 11 | 3.227666 | transcriptional regulator, HTH_3 family | |
| VC_1969 | -1 | 12 | 3.940144 | hypothetical protein | |
| VC_1970 | -1 | 11 | 4.362699 | benzoate transport protein | |
| VC_1971 | 0 | 13 | 4.519537 | o-succinylbenzoic acid--CoA ligase | |
| VC_1972 | -1 | 14 | 3.942138 | o-succinylbenzoate-CoA synthase | |
| VC_1973 | -1 | 13 | 3.551131 | naphthoate synthase | |
| VC_1974 | 1 | 15 | 3.487603 | conserved hypothetical protein | |
| VC_1975 | 0 | 16 | 3.558205 | 2-succinyl-6-hydroxy-2, | |
| VC_1976 | 1 | 17 | 3.184376 | menaquinone-specific isochorismate synthase | |
| VC_1977 | 1 | 18 | 2.559122 | aspartate aminotransferase, putative | |
| VC_1978 | 2 | 15 | 1.991779 | conserved hypothetical protein | |
| VC_1979 | 1 | 13 | 2.075521 | deoxyguanosinetriphosphate triphosphohydrolase | |
| VC_1980 | 1 | 13 | 1.699608 | conserved hypothetical protein | |
| VC_1981 | 1 | 12 | 1.779252 | hypothetical protein | |
| VC_1982 | 0 | 12 | 1.556571 | hypothetical protein | |
| VC_1983 | -1 | 12 | 1.816602 | peptidase, putative | |
| VC_1984 | -1 | 13 | 2.682109 | ribonuclease D | |
| VC_1985 | -1 | 14 | 3.021970 | long-chain-fatty-acid--CoA ligase |
| 22 | VC_2284 | VC_2327 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2284 | -2 | 18 | -3.105219 | hypothetical protein | |
| VC_2285 | -2 | 13 | -2.486398 | GGDEF family protein | |
| VC_2286 | 1 | 18 | -2.091754 | conserved hypothetical protein | |
| VC_2287 | 2 | 22 | -1.727973 | DNA-damage-inducible protein P | |
| VC_2288 | 2 | 30 | -1.752969 | conserved hypothetical protein | |
| VC_2289 | 3 | 32 | -1.158116 | thiamin biosynthesis lipoprotein ApbE | |
| VC_2290 | 4 | 35 | -0.638275 | NADH:ubiquinone oxidoreductase, Na | |
| VC_2291 | 3 | 30 | -0.464811 | NADH:ubiquinone oxidoreductase, Na | |
| VC_2292 | 2 | 23 | -0.831710 | NADH:ubiquinone oxidoreductase, Na | |
| VC_2293 | 2 | 20 | -0.730748 | NADH:ubiquinone oxidoreductase, Na | |
| VC_2294 | 0 | 17 | -0.549578 | NADH:ubiquinone oxidoreductase, Na | |
| VC_2295 | 0 | 15 | -0.965724 | NADH:ubiquinone oxidoreductase, Na | |
| VC_2296 | -3 | 14 | -1.089220 | bolA protein | |
| VC_2297 | -2 | 12 | -1.237773 | conserved hypothetical protein | |
| VC_2298 | -2 | 14 | -1.018578 | lipoprotein, putative | |
| VC_2299 | -2 | 16 | -1.449462 | peptidyl-prolyl cis-trans isomerase A | |
| VC_2300 | -1 | 16 | -2.400476 | ampG protein, putative | |
| VC_2301 | -1 | 19 | -3.465726 | transcriptional activator, putative | |
| VC_2302 | -3 | 17 | -2.866876 | RNA polymerase sigma-70 factor, ECF subfamily | |
| VC_2303 | -1 | 17 | -1.171572 | conserved hypothetical protein | |
| VC_2304 | 0 | 17 | 0.812683 | hypothetical protein | |
| VC_2305 | 1 | 16 | 1.631581 | outer membrane protein OmpK | |
| VC_2306 | 4 | 17 | 2.918810 | hypothetical protein | |
| VC_2307 | 2 | 14 | 2.738074 | 2-dehydropantoate 2-reductase | |
| VC_2308 | 3 | 15 | 2.737417 | 4-methyl-5(B-hydroxyethyl)-thiazole | |
| VC_2309 | 2 | 15 | 1.435231 | aminotransferase, class V | |
| VC_2310 | 2 | 17 | -0.031251 | conserved hypothetical protein | |
| VC_2311 | -1 | 14 | 0.182319 | HesA/MoeB/ThiF family protein | |
| VC_2312 | 0 | 13 | -0.787779 | membrane-bound lytic murein transglycosylase A | |
| VC_2313 | 0 | 17 | -2.011445 | hypothetical protein | |
| VC_2314 | 1 | 16 | 1.140555 | hypothetical protein | |
| VC_2315 | 3 | 20 | 3.658963 | hypothetical protein | |
| VC_2316 | 3 | 20 | 3.829109 | N-acetylglutamate synthase | |
| VC_2317 | 3 | 22 | 4.390190 | hypothetical protein | |
| VC_2318 | 3 | 23 | 4.777676 | hypothetical protein | |
| VC_2319 | 3 | 22 | 4.636193 | exodeoxyribonuclease V, 67 kDa subunit | |
| VC_2320 | 3 | 23 | 4.687384 | exodeoxyribonuclease V, 135 kDa subunit | |
| VC_2321 | 3 | 21 | 3.894431 | hypothetical protein | |
| VC_2322 | 3 | 21 | 3.784437 | exodeoxyribonuclease V, 125 kDa subunit | |
| VC_2323 | 2 | 18 | 2.524740 | conserved hypothetical protein | |
| VC_2324 | 2 | 19 | 2.524375 | transcriptional regulator, LysR family | |
| VC_2325 | 3 | 20 | 3.252946 | hypothetical protein | |
| VC_2326 | 3 | 20 | 2.690420 | conserved hypothetical protein | |
| VC_2327 | 2 | 17 | 2.201498 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2305 | CHANNELTSX | 81 | 6e-20 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2316 | CARBMTKINASE | 38 | 6e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 23 | VC_2371 | VC_2386 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2371 | 0 | 18 | 3.693173 | conserved hypothetical protein | |
| VC_2372 | 0 | 20 | 3.917474 | hypothetical protein | |
| VC_2373 | 0 | 20 | 4.058122 | glutamate synthase, large subunit | |
| VC_2374 | 1 | 19 | 4.043808 | glutamate synthase, small subunit | |
| VC_2375 | 0 | 19 | 4.006799 | hypothetical protein | |
| VC_2376 | 1 | 19 | 3.978453 | glutamate synthase, large subunit | |
| VC_2377 | 2 | 20 | 3.299592 | glutamate synthase, small subunit | |
| VC_2378 | 2 | 20 | 2.972454 | conserved hypothetical protein | |
| VC_2379 | 3 | 19 | 3.098074 | MTA/SAH nucleosidase | |
| VC_2380 | 4 | 19 | -0.391667 | cobalamin biosynthesis protein CbiB, putative | |
| VC_2381 | 4 | 23 | -5.905206 | conserved hypothetical protein | |
| VC_2382 | 3 | 28 | -8.516914 | conserved hypothetical protein | |
| VC_2383 | 4 | 30 | -9.410647 | transcriptional regulator, LysR family | |
| VC_2384 | -1 | 21 | -5.408275 | conserved hypothetical protein | |
| VC_2385 | 1 | 22 | -5.207207 | RNA-directed DNA polymerase | |
| VC_2386 | -1 | 18 | -3.059398 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2381 | FERRIBNDNGPP | 31 | 0.003 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
| 24 | VC_2408 | VC_2429 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2408 | 2 | 30 | 2.077258 | cell division protein FtsL | |
| VC_2409 | 4 | 39 | 2.265817 | conserved hypothetical protein | |
| VC_2410 | 5 | 40 | 2.222842 | hypothetical protein | |
| VC_2411 | 3 | 33 | 1.261928 | hypothetical protein | |
| VC_2412 | 2 | 29 | 1.735240 | pyruvate dehydrogenase, E3 component, lipoamide | |
| VC_2413 | 1 | 25 | 1.864733 | pyruvate dehydrogenase, E2 component, | |
| VC_2414 | -1 | 18 | 1.453324 | pyruvate dehydrogenase, E1 component | |
| VC_2415 | -2 | 11 | 0.908886 | pyruvate dehydrogenase complex repressor | |
| VC_2416 | -1 | 13 | 1.228822 | 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, | |
| VC_2417 | 0 | 18 | 3.211200 | single-stranded-DNA-specific exonuclease RecJ | |
| VC_2418 | 1 | 18 | 1.811299 | thiol:disulfide interchange protein DsbC | |
| VC_2419 | 1 | 20 | 2.631170 | integrase/recombinase XerD | |
| VC_2420 | 2 | 21 | 2.284451 | flavodoxin 2 | |
| VC_2421 | 2 | 20 | 2.736469 | ampD protein | |
| VC_2422 | 2 | 19 | 2.393707 | nicotinate-nucleotide pyrophosphorylase, | |
| VC_2423 | 1 | 19 | 1.672039 | fimbrial protein | |
| VC_2424 | 1 | 23 | 2.600111 | type IV pilus assembly protein PilB | |
| VC_2425 | -1 | 21 | 2.536832 | type IV pilin biogenesis protein PilC | |
| VC_2426 | -1 | 20 | 3.406882 | leader peptidase PilD | |
| VC_2427 | -1 | 18 | 3.199647 | conserved hypothetical protein | |
| VC_2428 | -2 | 19 | 3.259129 | conserved hypothetical protein | |
| VC_2429 | -2 | 18 | 3.219518 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2413 | RTXTOXIND | 30 | 0.032 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2423 | BCTERIALGSPG | 60 | 3e-14 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2425 | BCTERIALGSPF | 447 | e-158 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2426 | PREPILNPTASE | 359 | e-127 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 25 | VC_2527 | VC_2538 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2527 | 2 | 23 | 0.444679 | conserved hypothetical protein | |
| VC_2528 | 1 | 22 | 1.137955 | ABC transporter, ATP-binding protein | |
| VC_2529 | 1 | 22 | 1.981962 | RNA polymerase sigma-54 factor | |
| VC_2530 | 0 | 17 | 2.272708 | sigma-54 modulation protein, putative | |
| VC_2531 | -1 | 18 | 2.772471 | PTS system, nitrogen regulatory IIA component | |
| VC_2532 | -1 | 18 | 3.236495 | conserved hypothetical protein | |
| VC_2533 | -1 | 16 | 3.692312 | phosphocarrier protein NPr | |
| VC_2534 | -2 | 15 | 3.584725 | magnesium transporter | |
| VC_2535 | 0 | 15 | 3.311806 | pmbA protein | |
| VC_2536 | 2 | 17 | 4.027497 | conserved hypothetical protein | |
| VC_2537 | 1 | 16 | 3.854161 | thiamine ABC transporter, ATP-binding protein, | |
| VC_2538 | 0 | 15 | 3.483014 | thiamine ABC transporter, permease protein, |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2534 | SECYTRNLCASE | 33 | 0.002 | Preprotein translocase SecY subunit signature. | |
>SECYTRNLCASE#Preprotein translocase SecY subunit signature. | |||||
| 26 | VC_2686 | VC_2729 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2686 | 2 | 17 | 2.446473 | conserved hypothetical protein | |
| VC_2687 | 1 | 16 | 2.797078 | hypothetical protein | |
| VC_2688 | 0 | 17 | 2.979927 | glpX protein | |
| VC_2689 | -1 | 15 | 2.646294 | 6-phosphofructokinase, isozyme I | |
| VC_2690 | 0 | 18 | 3.084301 | conserved hypothetical protein | |
| VC_2691 | 0 | 18 | 3.162244 | periplasmic protein cpxP, putative | |
| VC_2692 | -1 | 17 | 2.693925 | transcriptional regulator CpxR | |
| VC_2693 | -1 | 14 | 1.900631 | sensor protein CpxA | |
| VC_2694 | -1 | 18 | 2.004219 | superoxide dismutase, Mn | |
| VC_2695 | 0 | 16 | 2.307186 | rRNA methylase, SpoU family | |
| VC_2696 | -1 | 16 | 2.166106 | fxsA protein | |
| VC_2697 | -3 | 14 | 2.384746 | GGDEF family protein | |
| VC_2698 | -2 | 16 | 2.405336 | aspartate ammonia-lyase | |
| VC_2699 | -2 | 15 | 3.088449 | C4-dicarboxylate transporter, anaerobic | |
| VC_2701 | -2 | 14 | 2.702655 | thiol:disulfide interchange protein DsbD | |
| VC_2702 | -1 | 17 | 2.290079 | transcriptional regulator, LuxR family | |
| VC_2703 | -1 | 17 | 1.765812 | conserved hypothetical protein | |
| VC_2704 | -3 | 18 | 0.984079 | hypothetical protein | |
| VC_2705 | -2 | 17 | 2.391612 | sodium/solute symporter, putative | |
| VC_2706 | 1 | 18 | 3.049730 | conserved hypothetical protein | |
| VC_2707 | 0 | 17 | 3.335194 | hypothetical protein | |
| VC_2708 | -1 | 16 | 3.332223 | guanylate kinase | |
| VC_2709 | -1 | 16 | 3.759315 | DNA-directed RNA polymerase, omega subunit | |
| VC_2710 | -1 | 18 | 3.565192 | guanosine-3',5'-bis(diphosphate) | |
| VC_2711 | 0 | 17 | 3.986073 | ATP-dependent DNA helicase RecG | |
| VC_2712 | 0 | 16 | 3.815045 | xanthine/uracil permease family protein | |
| VC_2713 | 1 | 18 | 4.340797 | osmolarity sensor protein EnvZ | |
| VC_2714 | 0 | 19 | 4.884395 | transcriptional regulator OmpR | |
| VC_2715 | -1 | 19 | 4.934328 | transcription elongation factor GreB | |
| VC_2716 | -1 | 17 | 4.729591 | conserved hypothetical protein | |
| VC_2717 | 0 | 14 | 4.277465 | hypothetical protein | |
| VC_2718 | 0 | 16 | 4.361564 | bioH protein | |
| VC_2719 | 0 | 15 | 4.080127 | ComF-related protein | |
| VC_2720 | 1 | 14 | 3.490500 | conserved hypothetical protein | |
| VC_2721 | 1 | 19 | 3.649873 | MutT/nudix family protein | |
| VC_2722 | 0 | 21 | 4.192872 | cysQ protein | |
| VC_2723 | 0 | 24 | 4.052717 | general secretion pathway protein N | |
| VC_2724 | 0 | 24 | 3.570472 | cholera toxin secretion protein EpsM | |
| VC_2725 | 0 | 23 | 3.035846 | general secretion pathway protein L | |
| VC_2726 | -1 | 25 | 3.632845 | general secretion pathway protein K | |
| VC_2727 | 0 | 23 | 3.777162 | general secretion pathway protein J | |
| VC_2728 | -1 | 19 | 3.316141 | general secretion pathway protein I | |
| VC_2729 | 0 | 18 | 3.188102 | general secretion pathway protein H |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2686 | IGASERPTASE | 28 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2692 | HTHFIS | 95 | 8e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2701 | TCRTETOQM | 31 | 0.020 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2702 | HTHFIS | 74 | 1e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2711 | SECA | 34 | 0.002 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2713 | PF06580 | 38 | 5e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2714 | HTHFIS | 99 | 5e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2727 | PilS_PF08805 | 32 | 8e-04 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2728 | BCTERIALGSPH | 30 | 0.001 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2729 | BCTERIALGSPH | 126 | 3e-39 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| 27 | VC_0402 | VC_0415 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0402 | -2 | 19 | 0.878151 | MSHA biogenesis protein MshL | |
| VC_0403 | -1 | 19 | 1.100625 | MSHA biogenesis protein MshM | |
| VC_0404 | -2 | 17 | 0.409731 | MSHA biogenesis protein MshN | |
| VC_0405 | 0 | 18 | 0.182807 | MSHA biogenesis protein MshE | |
| VC_0406 | 1 | 20 | -0.690493 | MSHA biogenesis protein MshG | |
| VC_0407 | 3 | 21 | -0.875888 | MSHA biogenesis protein MshF | |
| VC_0408 | 4 | 21 | -0.673216 | MSHA pilin protein MshB | |
| VC_0409 | 3 | 22 | -1.677878 | MSHA pilin protein MshA | |
| VC_0410 | 2 | 17 | -0.795547 | MSHA pilin protein MshC | |
| VC_0411 | 2 | 16 | -0.874164 | MSHA pilin protein MshD | |
| VC_0412 | 1 | 15 | -0.748060 | hypothetical protein | |
| VC_0413 | 1 | 15 | -0.572063 | hypothetical protein | |
| VC_0414 | -1 | 14 | -0.309087 | hypothetical protein | |
| VC_0415 | -2 | 16 | 1.751826 | rod shape-determining protein MreB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0402 | BCTERIALGSPD | 214 | 7e-64 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0406 | BCTERIALGSPF | 282 | 5e-94 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0408 | BCTERIALGSPG | 42 | 3e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0409 | BCTERIALGSPG | 48 | 9e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0410 | BCTERIALGSPG | 41 | 3e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0411 | BCTERIALGSPG | 41 | 4e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0412 | BCTERIALGSPH | 31 | 0.003 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0414 | TYPE4SSCAGA | 31 | 0.042 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0415 | SHAPEPROTEIN | 567 | 0.0 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 28 | VC_0628 | VC_0633 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0628 | -1 | 10 | -0.459716 | conserved hypothetical protein | |
| VC_0629 | 0 | 10 | -0.799446 | multidrug resistance protein, putative | |
| VC_0630 | 2 | 18 | -1.873283 | conserved hypothetical protein | |
| VC_0631 | 2 | 21 | -1.856067 | tyrosyl-tRNA synthetase | |
| VC_0632 | 2 | 23 | -1.610466 | D-alanyl-D-alanine | |
| VC_0633 | 1 | 27 | -2.017272 | outer membrane protein OmpU |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0628 | RTXTOXIND | 49 | 2e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0629 | ACRIFLAVINRP | 488 | e-157 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0632 | BLACTAMASEA | 30 | 0.024 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0633 | ECOLIPORIN | 83 | 1e-19 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 29 | VC_0852 | VC_0864 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0852 | 1 | 17 | 0.205010 | DNA repair protein RecN | |
| VC_0853 | 1 | 19 | -0.278164 | conserved hypothetical protein | |
| VC_0854 | 1 | 20 | -0.955550 | heat shock protein GrpE | |
| VC_0855 | -2 | 20 | -2.997401 | dnaK protein | |
| VC_0856 | -2 | 20 | -4.346609 | dnaJ protein | |
| VC_0857 | 0 | 29 | -7.313440 | fimbrial assembly protein PilE, putative | |
| VC_0858 | 0 | 24 | -5.104517 | type IV pilin, putative | |
| VC_0859 | -1 | 22 | -4.363604 | hypothetical protein | |
| VC_0860 | -2 | 21 | -3.855002 | hypothetical protein | |
| VC_0861 | -1 | 13 | -0.950606 | type IV pilin, putative | |
| VC_0862 | -2 | 14 | -0.910688 | hypothetical protein | |
| VC_0863 | -1 | 14 | -0.627503 | conserved hypothetical protein | |
| VC_0864 | -1 | 11 | 2.121446 | yfhC protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0852 | PF06580 | 33 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0855 | SHAPEPROTEIN | 141 | 4e-39 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0857 | BCTERIALGSPG | 48 | 4e-10 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0858 | BCTERIALGSPH | 35 | 5e-05 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0859 | BCTERIALGSPG | 30 | 0.004 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0861 | BCTERIALGSPG | 37 | 4e-06 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0864 | cloacin | 30 | 0.004 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| 30 | VC_0965 | VC_0976 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_0965 | 2 | 20 | -1.980681 | phosphoenolpyruvate-protein phosphotransferase | |
| VC_0966 | 1 | 14 | -1.179920 | phosphocarrier protein HPr | |
| VC_0967 | -1 | 17 | -1.504798 | hypothetical protein | |
| VC_0968 | -1 | 17 | -2.083754 | cysteine synthase A | |
| VC_0969 | -1 | 14 | -1.870437 | cysZ protein | |
| VC_0970 | -2 | 15 | -1.801877 | cell division protein ZipA | |
| VC_0971 | -1 | 18 | -2.215164 | DNA ligase | |
| VC_0972 | 0 | 20 | -3.222211 | porin, putative | |
| VC_0973 | 0 | 21 | -3.503063 | hypothetical protein | |
| VC_0974 | 0 | 19 | -1.659634 | transcriptional regulator, MerR family | |
| VC_0975 | 1 | 19 | -1.683481 | conserved hypothetical protein | |
| VC_0976 | 0 | 19 | -1.693964 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0965 | PHPHTRNFRASE | 762 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0969 | ACRIFLAVINRP | 29 | 0.018 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0970 | TONBPROTEIN | 32 | 0.002 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0972 | ECOLNEIPORIN | 59 | 8e-12 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_0976 | IGASERPTASE | 33 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 31 | VC_1081 | VC_1089 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1081 | 0 | 16 | -2.691522 | response regulator | |
| VC_1082 | 1 | 16 | -2.731956 | response regulator | |
| VC_1083 | 1 | 14 | -2.852794 | hypothetical protein | |
| VC_1084 | 0 | 15 | -2.622524 | sensory box sensor histidine kinase | |
| VC_1085 | 0 | 15 | -2.725452 | sensor histidine kinase | |
| VC_1086 | 0 | 10 | -2.767083 | response regulator | |
| VC_1087 | 1 | 10 | -2.440929 | response regulator | |
| VC_1088 | 1 | 13 | -1.906405 | sensor histidine kinase | |
| VC_1089 | 0 | 15 | -0.975105 | periplasmic binding protein-related protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1081 | HTHFIS | 55 | 2e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1082 | HTHFIS | 58 | 4e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1086 | HTHFIS | 89 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1087 | HTHFIS | 97 | 6e-24 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1089 | TYPE3IMSPROT | 30 | 0.011 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 32 | VC_1311 | VC_1318 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1311 | -2 | 10 | 0.749775 | conserved hypothetical protein | |
| VC_1312 | -2 | 10 | 0.489024 | alanine racemase, putative | |
| VC_1313 | -2 | 9 | 0.129479 | methyl-accepting chemotaxis protein | |
| VC_1314 | -2 | 12 | -0.289011 | transporter, putative | |
| VC_1315 | -2 | 13 | -0.211867 | sensor histidine kinase | |
| VC_1316 | 0 | 10 | -0.332894 | chemotaxis protein CheY, putative | |
| VC_1317 | 0 | 10 | -0.459092 | conserved hypothetical protein | |
| VC_1318 | 1 | 12 | -0.680105 | outer membrane protein OmpV |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1311 | VACCYTOTOXIN | 30 | 0.016 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1312 | ALARACEMASE | 190 | 7e-59 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1316 | HTHFIS | 62 | 3e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1318 | ECOLIPORIN | 30 | 0.007 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
| 33 | VC_1391 | VC_1411 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1391 | -3 | 15 | 0.035149 | multidrug transporter, putative | |
| VC_1392 | 0 | 17 | -1.189751 | deoxyribodipyrimidine photolyase, putative | |
| VC_1393 | 1 | 19 | -4.014276 | sugE protein | |
| VC_1394 | 2 | 19 | -4.162151 | methyl-accepting chemotaxis protein | |
| VC_1396 | 0 | 20 | -2.946260 | hypothetical protein | |
| VC_1397 | 1 | 19 | -3.038518 | chemotaxis protein CheA | |
| VC_1398 | 0 | 20 | -3.442485 | chemotaxis protein CheY | |
| VC_1399 | -1 | 20 | -3.748288 | chemotaxis protein methyltransferase CheR | |
| VC_1400 | 1 | 20 | -3.218057 | hypothetical protein | |
| VC_1401 | 0 | 20 | -3.326279 | protein-glutamate methylesterase CheB | |
| VC_1402 | -1 | 17 | -3.232744 | purine-binding chemotaxis protein Chew, | |
| VC_1403 | 1 | 18 | -3.211288 | methyl-accepting chemotaxis protein | |
| VC_1404 | 0 | 19 | -2.280853 | hypothetical protein | |
| VC_1405 | 0 | 17 | -1.385021 | methyl-accepting chemotaxis protein | |
| VC_1406 | 0 | 18 | -0.891092 | methyl-accepting chemotaxis protein | |
| VC_1407 | 0 | 17 | -0.324422 | ATP-dependent RNA helicase RhlE | |
| VC_1408 | -1 | 16 | -1.350366 | transcriptional regulator, TetR family | |
| VC_1409 | -1 | 13 | -0.855592 | multidrug resistance protein, putative | |
| VC_1410 | -2 | 9 | -1.005788 | multidrug resistance protein VceA | |
| VC_1411 | -2 | 8 | -0.478681 | multidrug resistance protein VceB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1391 | TCRTETB | 121 | 5e-32 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1392 | TACYTOLYSIN | 30 | 0.019 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1397 | PF06580 | 33 | 0.005 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1398 | HTHFIS | 68 | 1e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1401 | HTHFIS | 72 | 7e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1402 | BINARYTOXINB | 30 | 0.027 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1405 | FRAGILYSIN | 30 | 0.024 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1406 | BACSURFANTGN | 29 | 0.049 | Yersinia/Haemophilus virulence surface antigen sign... | |
>BACSURFANTGN#Yersinia/Haemophilus virulence surface antigen | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1408 | HTHTETR | 62 | 3e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1410 | RTXTOXIND | 111 | 4e-29 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1411 | TCRTETB | 102 | 2e-25 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 34 | VC_1423 | VC_1430 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1423 | 1 | 20 | -3.638549 | hypothetical protein | |
| VC_1424 | -1 | 20 | -3.630835 | spermidine/putrescine ABC transporter, | |
| VC_1425 | -1 | 18 | -3.839495 | spermidine/putrescine ABC transporter, | |
| VC_1426 | -2 | 13 | -3.997099 | spermidine/putrescine ABC transporter, permease | |
| VC_1427 | -2 | 11 | -4.087681 | spermidine/putrescine ABC transporter, permease | |
| VC_1428 | -1 | 13 | -3.776897 | spermidine/putrescine ABC transporter, | |
| VC_1429 | -1 | 12 | -4.048502 | hypothetical protein | |
| VC_1430 | 0 | 13 | -3.050333 | bax protein, putative |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1423 | cloacin | 30 | 0.010 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1424 | MALTOSEBP | 28 | 0.048 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1425 | MYCMG045 | 40 | 9e-06 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1430 | FLGFLGJ | 29 | 0.025 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| 35 | VC_1445 | VC_1457 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1445 | -1 | 14 | -2.320681 | sensor histidine kinase/response regulator | |
| VC_1446 | -1 | 11 | 0.104752 | toxin secretion transporter, putative | |
| VC_1447 | -1 | 11 | -0.172846 | RTX toxin transporter | |
| VC_1448 | 0 | 11 | -0.421582 | RTX toxin transporter | |
| VC_1449 | 0 | 11 | -0.203093 | hypothetical protein | |
| VC_1450 | 0 | 11 | -0.276760 | RTX toxin activating protein | |
| VC_1451 | 0 | 12 | -0.670225 | RTX toxin RtxA | |
| VC_1452 | 6 | 33 | -7.445087 | RstC protein | |
| VC_1453 | 3 | 27 | -4.844479 | RstB1 protein | |
| VC_1454 | 4 | 28 | -4.938306 | RstA1 protein | |
| VC_1455 | 5 | 27 | -3.894152 | transcriptional repressor RstR | |
| VC_1456 | 3 | 26 | -3.177454 | cholera enterotoxin, B subunit | |
| VC_1457 | 3 | 24 | -2.080501 | cholera enterotoxin, A subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1445 | HTHFIS | 79 | 1e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1447 | RTXTOXIND | 380 | e-130 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1450 | RTXTOXINC | 70 | 4e-18 | Gram-negative bacterial RTX toxin-activating protein C... | |
>RTXTOXINC#Gram-negative bacterial RTX toxin-activating protein C | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1451 | RTXTOXINA | 65 | 9e-12 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1456 | ENTEROTOXINB | 239 | 7e-86 | Heat labile enterotoxin B chain signature. | |
>ENTEROTOXINB#Heat labile enterotoxin B chain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1457 | ENTEROTOXINA | 471 | e-173 | Heat-labile enterotoxin A chain signature. | |
>ENTEROTOXINA#Heat-labile enterotoxin A chain signature. | |||||
| 36 | VC_1602 | VC_1607 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1602 | -2 | 12 | -0.461882 | chemotaxis protein CheV | |
| VC_1603 | -2 | 13 | 0.265151 | hypothetical protein | |
| VC_1604 | -1 | 13 | 0.920398 | response regulator | |
| VC_1605 | -1 | 12 | 0.798229 | sensor kinase citA, putative | |
| VC_1606 | 1 | 13 | 0.886353 | conserved hypothetical protein | |
| VC_1607 | 0 | 12 | 0.750669 | conserved hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1602 | HTHFIS | 69 | 5e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1604 | HTHFIS | 82 | 4e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1605 | PF06580 | 38 | 9e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1607 | RTXTOXIND | 46 | 2e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 37 | VC_1643 | VC_1653 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1643 | -1 | 15 | -0.664891 | methyl-accepting chemotaxis protein | |
| VC_1644 | -1 | 19 | -2.032196 | hypothetical protein | |
| VC_1645 | 0 | 16 | -1.666207 | conserved hypothetical protein | |
| VC_1646 | -1 | 15 | -1.968150 | hypothetical protein | |
| VC_1647 | -1 | 14 | -1.856492 | conserved hypothetical protein | |
| VC_1648 | -1 | 16 | -3.013547 | hypothetical protein | |
| VC_1649 | -1 | 16 | -3.083903 | trypsin, putative | |
| VC_1650 | -2 | 13 | -2.077298 | collagenase | |
| VC_1651 | -3 | 14 | -2.326816 | response regulator VieB | |
| VC_1652 | -2 | 15 | -2.209343 | response regulator VieA | |
| VC_1653 | -3 | 14 | -2.100041 | sensory box sensor histidine kinase/response |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1643 | FLAGELLIN | 31 | 0.015 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1645 | BONTOXILYSIN | 28 | 0.029 | Bontoxilysin signature. | |
>BONTOXILYSIN#Bontoxilysin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1649 | V8PROTEASE | 38 | 5e-05 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1650 | MICOLLPTASE | 522 | e-173 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1651 | HTHFIS | 48 | 9e-08 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1652 | HTHFIS | 62 | 2e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1653 | HTHFIS | 59 | 5e-11 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 38 | VC_1673 | VC_1679 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1673 | -1 | 14 | 1.533579 | transporter, AcrB/D/F family | |
| VC_1674 | -1 | 14 | 1.637919 | periplasmic linker protein, putative | |
| VC_1675 | -3 | 16 | 1.455644 | multidrug resistance protein, putative | |
| VC_1676 | -2 | 16 | 0.832453 | phage shock protein C | |
| VC_1677 | -2 | 17 | 0.585175 | phage shock protein B | |
| VC_1678 | -2 | 15 | 0.757646 | phage shock protein A | |
| VC_1679 | -1 | 17 | 1.062779 | psp operon transcriptional activator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1673 | ACRIFLAVINRP | 492 | e-159 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1674 | RTXTOXIND | 41 | 4e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1675 | RTXTOXIND | 44 | 7e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1679 | HTHFIS | 359 | e-124 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 39 | VC_1741 | VC_1748 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1741 | 1 | 19 | 0.578081 | transcriptional regulator, TetR family | |
| VC_1742 | 1 | 19 | 0.229861 | hypothetical protein | |
| VC_1743 | 0 | 16 | 0.133569 | hypothetical protein | |
| VC_1744 | 0 | 16 | -0.904214 | conserved hypothetical protein | |
| VC_1745 | 0 | 16 | -1.631828 | succinate-semialdehyde dehydrogenase | |
| VC_1746 | 0 | 16 | -2.929416 | transcriptional regulator, TetR family | |
| VC_1747 | 1 | 19 | -3.347518 | hypothetical protein | |
| VC_1748 | 0 | 17 | -3.061474 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1741 | HTHTETR | 66 | 2e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1745 | VACCYTOTOXIN | 29 | 0.049 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1746 | HTHTETR | 62 | 4e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1748 | IGASERPTASE | 30 | 0.011 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 40 | VC_1756 | VC_1764 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1756 | -1 | 14 | -2.355632 | periplasmic linker protein, putative | |
| VC_1757 | 0 | 19 | -3.361670 | transporter, AcrB/D/F family | |
| VC_1758 | 3 | 33 | -6.940356 | *integrase, phage family | |
| VC_1760 | 3 | 29 | -6.688972 | helicase, putative | |
| VC_1761 | 3 | 26 | -6.211379 | hypothetical protein | |
| VC_1762 | 2 | 24 | -5.731537 | hypothetical protein | |
| VC_1763 | 2 | 22 | -5.723999 | chemotaxis protein MotB-related protein | |
| VC_1764 | 2 | 19 | -5.327445 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1756 | RTXTOXIND | 49 | 2e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1757 | ACRIFLAVINRP | 471 | e-152 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1763 | OMPADOMAIN | 30 | 0.007 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1764 | TYPE4SSCAGA | 32 | 0.008 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 41 | VC_1831 | VC_1838 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1831 | 0 | 15 | -2.502665 | sensor histidine kinase | |
| VC_1832 | 2 | 20 | -1.924216 | hypothetical protein | |
| VC_1833 | 2 | 20 | -2.054808 | quinolinate synthetase A | |
| VC_1834 | 2 | 21 | -2.163517 | conserved hypothetical protein | |
| VC_1835 | 2 | 21 | -2.560835 | peptidoglycan-associated lipoprotein | |
| VC_1836 | 0 | 20 | -2.609199 | tolB protein | |
| VC_1837 | 3 | 20 | -2.523421 | tolA protein | |
| VC_1838 | 2 | 18 | -2.529820 | tolR membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1831 | HTHFIS | 61 | 7e-12 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1835 | OMPADOMAIN | 103 | 3e-29 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1837 | IGASERPTASE | 65 | 1e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1838 | adhesinmafb | 27 | 0.028 | Neisseria meningitidis: adhesin MafB signature. | |
>adhesinmafb#Neisseria meningitidis: adhesin MafB signature. | |||||
| 42 | VC_1919 | VC_1926 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_1919 | 3 | 21 | -0.463426 | DNA-binding protein HU-beta | |
| VC_1920 | 1 | 14 | -0.120043 | ATP-dependent protease LA | |
| VC_1921 | 1 | 12 | -0.116011 | ATP-dependent Clp protease, ATP-binding subunit | |
| VC_1922 | 0 | 12 | 0.484751 | ATP-dependent Clp protease, proteolytic subunit | |
| VC_1923 | 0 | 11 | 0.472927 | trigger factor | |
| VC_1924 | -1 | 11 | 0.635184 | hypothetical protein | |
| VC_1925 | -1 | 12 | 0.802057 | C4-dicarboxylate transport sensor protein | |
| VC_1926 | -2 | 13 | 1.052050 | C4-dicarboxylate transport transcriptional |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1919 | DNABINDINGHU | 120 | 1e-39 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1920 | HTHFIS | 31 | 0.018 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1925 | ANTHRAXTOXNA | 31 | 0.018 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_1926 | HTHFIS | 447 | e-157 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 43 | VC_2062 | VC_2067 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2062 | 1 | 17 | -0.783143 | protein-glutamate methylesterase CheB | |
| VC_2063 | 2 | 15 | -0.423782 | chemotaxis protein CheA | |
| VC_2064 | -1 | 14 | -0.104404 | chemotaxis protein CheZ | |
| VC_2065 | 0 | 13 | 0.328532 | chemotaxis protein CheY | |
| VC_2066 | 0 | 13 | 0.604950 | RNA polymerase sigma factor for flagellar operon | |
| VC_2067 | -1 | 11 | 0.462123 | MinD-related protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2062 | HTHFIS | 66 | 7e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2063 | PF06580 | 41 | 9e-06 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2065 | HTHFIS | 88 | 1e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2067 | CABNDNGRPT | 29 | 0.025 | NodO calcium binding signature. | |
>CABNDNGRPT#NodO calcium binding signature. | |||||
| 44 | VC_2120 | VC_2147 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2120 | -1 | 18 | 1.112103 | flagellar biosynthetic protein FlhB | |
| VC_2121 | 1 | 16 | 0.692439 | flagellar biosynthetic protein FliR | |
| VC_2122 | 1 | 17 | 0.852283 | flagellar biosynthetic protein FliQ | |
| VC_2123 | -1 | 12 | 2.548448 | flagellar biosynthetic protein FliP | |
| VC_2124 | -1 | 13 | 2.607272 | flagellar protein FliO | |
| VC_2125 | 0 | 13 | 3.066947 | flagellar motor switch protein FliN | |
| VC_2126 | -1 | 12 | 3.238536 | flagellar motor switch protein FliM | |
| VC_2127 | -1 | 13 | 3.247331 | flagellar protein FliL, putative | |
| VC_2128 | -1 | 12 | 2.985710 | flagellar hook-length control protein FliK, | |
| VC_2129 | 0 | 14 | 2.029213 | flagellar protein FliJ, putative | |
| VC_2130 | -2 | 13 | 2.336112 | flagellum-specific ATP synthase FliI | |
| VC_2131 | -2 | 13 | 1.926047 | flagellar assembly protein FliH, putative | |
| VC_2132 | -2 | 13 | 1.624292 | flagellar motor switch protein FliG | |
| VC_2133 | -2 | 12 | 1.522172 | flagellar M-ring protein FliF | |
| VC_2134 | -2 | 13 | 0.829430 | flagellar hook-basal body complex protein FliE | |
| VC_2135 | -2 | 13 | 1.731009 | sigma-54 dependent response regulator | |
| VC_2136 | -1 | 13 | 1.540991 | sensory box sensor histidine kinase | |
| VC_2137 | -1 | 14 | 1.465499 | sigma-54 dependent transcriptional activator | |
| VC_2138 | -1 | 15 | 1.202676 | flagellar protein FliS | |
| VC_2139 | -1 | 13 | 1.424799 | flagellar rod protein FlaI, putative | |
| VC_2140 | -1 | 11 | 1.671774 | flagellar hook-associated protein FliD | |
| VC_2141 | -1 | 10 | 0.933319 | flagellin FlaG | |
| VC_2142 | 0 | 11 | 0.712749 | flagellin FlaB | |
| VC_2143 | 0 | 10 | 0.338348 | flagellin FlaD | |
| VC_2144 | 1 | 14 | 0.379655 | flagellin FlaE | |
| VC_2145 | 0 | 16 | -0.511465 | tyrA protein | |
| VC_2146 | 4 | 20 | -1.429148 | conserved hypothetical protein | |
| VC_2147 | 1 | 18 | 0.534626 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2120 | TYPE3IMSPROT | 346 | e-120 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2121 | TYPE3IMRPROT | 121 | 2e-35 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2122 | TYPE3IMQPROT | 55 | 8e-14 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2123 | FLGBIOSNFLIP | 280 | 3e-97 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2125 | FLGMOTORFLIN | 108 | 1e-33 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2126 | FLGMOTORFLIM | 250 | 2e-83 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2128 | FLGHOOKFLIK | 56 | 2e-10 | Flagellar hook-length control protein signature. | |
>FLGHOOKFLIK#Flagellar hook-length control protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2129 | FLGFLIJ | 40 | 1e-06 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2131 | FLGFLIH | 67 | 2e-15 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2132 | FLGMOTORFLIG | 283 | 3e-96 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2133 | FLGMRINGFLIF | 290 | 3e-93 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2134 | FLGHOOKFLIE | 62 | 3e-16 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2135 | HTHFIS | 498 | e-176 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2136 | PF06580 | 32 | 0.003 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2137 | HTHFIS | 507 | e-180 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2140 | GPOSANCHOR | 37 | 2e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2142 | FLAGELLIN | 185 | 4e-56 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2143 | FLAGELLIN | 191 | 3e-58 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2144 | FLAGELLIN | 206 | 5e-64 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2147 | IGASERPTASE | 30 | 0.002 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 45 | VC_2187 | VC_2202 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2187 | -1 | 14 | -0.295700 | flagellin FlaC | |
| VC_2188 | 0 | 14 | 0.063426 | flagellin core protein A | |
| VC_2189 | 0 | 14 | 0.082398 | hypothetical protein | |
| VC_2190 | 0 | 15 | 0.344041 | flagellar hook-associated protein FlgL | |
| VC_2191 | 1 | 13 | 0.936945 | flagellar hook-associated protein FlgM | |
| VC_2192 | 1 | 13 | 0.946830 | flagellar protein FlgJ | |
| VC_2193 | 1 | 15 | 0.886415 | flagellar P-ring protein FlgI | |
| VC_2194 | 0 | 15 | 0.338564 | flagellar L-ring protein FlgH | |
| VC_2195 | 0 | 16 | 0.284217 | flagellar basal-body rod protein FlgG | |
| VC_2196 | 0 | 15 | -0.191296 | flagellar basal-body rod protein FlgF | |
| VC_2197 | 1 | 15 | -1.591077 | flagellar hook protein FlgE | |
| VC_2198 | 1 | 16 | -2.017866 | basal-body rod modification protein FlgD | |
| VC_2199 | 2 | 16 | -2.136398 | flagellar basal-body rod protein FlgC | |
| VC_2200 | 2 | 15 | -2.297544 | flagellar basal-body rod protein FlgB | |
| VC_2201 | 1 | 16 | -2.144579 | chemotaxis protein methyltransferase CheR | |
| VC_2202 | 1 | 13 | -1.853360 | chemotaxis protein CheV |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2187 | FLAGELLIN | 191 | 4e-58 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2188 | FLAGELLIN | 194 | 3e-59 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2190 | FLAGELLIN | 29 | 0.031 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2191 | FLGHOOKAP1 | 537 | 0.0 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2192 | FLGFLGJ | 401 | e-143 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2193 | FLGPRINGFLGI | 425 | e-151 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2194 | FLGLRINGFLGH | 136 | 1e-41 | Flagellar L-ring protein signature. | |
>FLGLRINGFLGH#Flagellar L-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2195 | FLGHOOKAP1 | 43 | 5e-07 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2197 | FLGHOOKAP1 | 40 | 2e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2199 | FLGHOOKAP1 | 32 | 5e-04 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2202 | HTHFIS | 65 | 7e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 46 | VC_2727 | VC_2734 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| VC_2727 | 0 | 23 | 3.777162 | general secretion pathway protein J | |
| VC_2728 | -1 | 19 | 3.316141 | general secretion pathway protein I | |
| VC_2729 | 0 | 18 | 3.188102 | general secretion pathway protein H | |
| VC_2730 | -1 | 16 | 2.917850 | general secretion pathway protein G | |
| VC_2731 | -1 | 15 | 2.996597 | general secretion pathway protein F | |
| VC_2732 | -1 | 13 | 1.934879 | general secretion pathway protein E | |
| VC_2734 | -2 | 12 | 1.553917 | general secretion pathway protein C |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2727 | PilS_PF08805 | 32 | 8e-04 | PilS N terminal | |
>PilS_PF08805#PilS N terminal | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2728 | BCTERIALGSPH | 30 | 0.001 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2729 | BCTERIALGSPH | 126 | 3e-39 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2730 | BCTERIALGSPG | 229 | 4e-81 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2731 | BCTERIALGSPF | 564 | 0.0 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| VC_2734 | BCTERIALGSPC | 341 | e-120 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||