| S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
| 1 | SB48_HM08orf00056 | SB48_HM08orf00097 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00056 | 1 | 18 | -7.213836 | hypothetical protein | |
| SB48_HM08orf00057 | 2 | 22 | -7.460296 | metallo-hydrolase | |
| SB48_HM08orf00059 | 4 | 30 | -8.944636 | peptidase S1 and S6 chymotrypsin/Hap | |
| SB48_HM08orf00061 | 5 | 36 | -11.609234 | hypothetical protein | |
| SB48_HM08orf00062 | 6 | 38 | -11.324555 | 50S rRNA methyltransferase | |
| SB48_HM08orf00063 | 7 | 43 | -12.116623 | hypothetical protein | |
| SB48_HM08orf00067 | 6 | 41 | -8.700027 | ATPase AAA | |
| SB48_HM08orf00068 | 5 | 40 | -8.119173 | GntR family transcriptional regulator | |
| SB48_HM08orf00070 | 6 | 38 | -8.108390 | transcriptional regulator | |
| SB48_HM08orf00073 | 5 | 38 | -7.811690 | threonine efflux protein | |
| SB48_HM08orf00074 | 5 | 33 | -6.538791 | tRNA synthetase subunit beta | |
| SB48_HM08orf00075 | 5 | 30 | -2.567189 | hypothetical protein | |
| SB48_HM08orf00077 | 5 | 28 | -2.256712 | hypothetical protein | |
| SB48_HM08orf00078 | 8 | 32 | -4.626493 | transposase | |
| SB48_HM08orf00079 | 8 | 30 | -5.453310 | hypothetical protein | |
| SB48_HM08orf00080 | 6 | 27 | -5.096833 | hypothetical protein | |
| SB48_HM08orf00081 | 6 | 26 | -5.036723 | integrase catalytic protein | |
| SB48_HM08orf00082 | 5 | 23 | -5.874470 | ATPase AAA | |
| SB48_HM08orf00083 | 2 | 21 | -6.103900 | hypothetical protein | |
| SB48_HM08orf00085 | 1 | 19 | -4.992122 | hypothetical protein | |
| SB48_HM08orf00086 | 0 | 16 | -5.589817 | hypothetical protein | |
| SB48_HM08orf00087 | 1 | 19 | -8.244845 | antibiotic biosynthesis monooxygenase | |
| SB48_HM08orf00088 | 2 | 21 | -9.414099 | hypothetical protein | |
| SB48_HM08orf00089 | 3 | 26 | -9.527914 | hypothetical protein | |
| SB48_HM08orf00090 | 8 | 39 | -12.784493 | hypothetical protein | |
| SB48_HM08orf00091 | 4 | 37 | -11.302275 | hypothetical protein | |
| SB48_HM08orf00092 | 3 | 30 | -8.828905 | transposase IS4 family protein | |
| SB48_HM08orf00093 | 1 | 30 | -8.097518 | hypothetical protein | |
| SB48_HM08orf00095 | 1 | 25 | -6.240783 | DNA methyltransferase | |
| SB48_HM08orf00096 | 1 | 23 | -6.035203 | hypothetical protein | |
| SB48_HM08orf00097 | -1 | 15 | -3.224901 | DEAD/DEAH box helicase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00059 | V8PROTEASE | 57 | 4e-11 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00079 | PF05272 | 25 | 0.006 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00085 | FbpA_PF05833 | 29 | 0.020 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
| 2 | SB48_HM08orf00208 | SB48_HM08orf00223 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00208 | 2 | 18 | -5.156114 | Cof-like hydrolase | |
| SB48_HM08orf00209 | 3 | 28 | -8.183044 | LmbE family protein | |
| SB48_HM08orf00211 | 4 | 31 | -10.342502 | hypothetical protein | |
| SB48_HM08orf00214 | 5 | 33 | -11.547010 | phosphomethylpyrimidine kinase | |
| SB48_HM08orf00215 | 7 | 45 | -14.957451 | major facilitator superfamily protein | |
| SB48_HM08orf00216 | 8 | 41 | -16.023534 | ABC transporter-like protein | |
| SB48_HM08orf00217 | 7 | 39 | -15.525593 | hypothetical protein | |
| SB48_HM08orf00220 | 4 | 32 | -12.883855 | hypothetical protein | |
| SB48_HM08orf00221 | 5 | 29 | -10.751631 | hypothetical protein | |
| SB48_HM08orf00222 | 5 | 28 | -10.338210 | ABC transporter | |
| SB48_HM08orf00223 | 4 | 24 | -8.948014 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00215 | TCRTETA | 32 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 3 | SB48_HM08orf00238 | SB48_HM08orf00281 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00238 | 2 | 18 | 1.688946 | hypothetical protein | |
| SB48_HM08orf00239 | 0 | 17 | 1.907480 | octanoyltransferase | |
| SB48_HM08orf00241 | 1 | 16 | -0.354976 | hypothetical protein | |
| SB48_HM08orf00243 | 1 | 17 | -0.007216 | hypothetical protein | |
| SB48_HM08orf00245 | 1 | 16 | -0.566968 | transcription factor, RsfA family | |
| SB48_HM08orf00246 | -1 | 17 | -0.064438 | hypothetical protein | |
| SB48_HM08orf00247 | -1 | 18 | 0.666597 | metal dependent phosphohydrolase | |
| SB48_HM08orf00248 | 1 | 17 | 2.794674 | hypothetical protein | |
| SB48_HM08orf00249 | 1 | 17 | 3.922854 | 4-oxalocrotonate tautomerase | |
| SB48_HM08orf00250 | 0 | 16 | 3.929509 | hypothetical protein | |
| SB48_HM08orf00251 | 0 | 16 | 3.788617 | zinc metalloprotease | |
| SB48_HM08orf00253 | -1 | 15 | 3.294207 | hypothetical protein | |
| SB48_HM08orf00256 | -1 | 15 | 2.979049 | penicillin-binding protein 2D | |
| SB48_HM08orf00258 | -1 | 15 | 2.534969 | agmatinase | |
| SB48_HM08orf00260 | -2 | 16 | 2.014404 | hypothetical protein | |
| SB48_HM08orf00261 | -2 | 16 | 3.110509 | arginyl-tRNA synthetase | |
| SB48_HM08orf00262 | -3 | 14 | 3.480514 | phospholipase D | |
| SB48_HM08orf00263 | -2 | 15 | 4.251573 | hypothetical protein | |
| SB48_HM08orf00266 | -2 | 15 | 4.067010 | hypothetical protein | |
| SB48_HM08orf00268 | -1 | 15 | 4.396687 | hypothetical protein | |
| SB48_HM08orf00270 | -3 | 9 | -0.557184 | acetyl-CoA acetyltransferase | |
| SB48_HM08orf00273 | -2 | 11 | -2.508827 | acyl-CoA dehydrogenase domain-containing | |
| SB48_HM08orf00274 | -1 | 12 | -3.380727 | acyl-CoA dehydrogenase | |
| SB48_HM08orf00276 | 1 | 15 | -4.884457 | TetR family transcriptional regulator | |
| SB48_HM08orf00279 | 2 | 15 | -4.960520 | methylmalonyl-CoA mutase | |
| SB48_HM08orf00281 | 4 | 20 | -8.255909 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00276 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00279 | 60KDINNERMP | 31 | 0.031 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00281 | PF03309 | 31 | 0.021 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| 4 | SB48_HM08orf00296 | SB48_HM08orf00340 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00296 | -3 | 14 | 3.041038 | response regulator receiver protein | |
| SB48_HM08orf00298 | -3 | 14 | 2.927965 | fructose-1,6-bisphosphate aldolase, class II | |
| SB48_HM08orf00301 | -2 | 13 | 3.244616 | transaldolase | |
| SB48_HM08orf00302 | -1 | 12 | 3.369093 | hypothetical protein | |
| SB48_HM08orf00305 | -1 | 11 | 3.027393 | UDP-N-acetylglucosamine | |
| SB48_HM08orf00306 | 1 | 15 | 1.646564 | fructose-1,6-bisphosphatase, class II | |
| SB48_HM08orf00309 | 0 | 15 | 0.657476 | hypothetical protein | |
| SB48_HM08orf00310 | 1 | 19 | 1.647118 | transcription termination factor Rho | |
| SB48_HM08orf00311 | 0 | 21 | 2.504978 | hypothetical protein | |
| SB48_HM08orf00312 | 0 | 19 | 2.481021 | hypothetical protein | |
| SB48_HM08orf00313 | -1 | 18 | 3.902786 | thymidine kinase | |
| SB48_HM08orf00314 | -2 | 16 | 4.462392 | hypothetical protein | |
| SB48_HM08orf00315 | -2 | 15 | 4.193914 | peptide chain release factor 1 | |
| SB48_HM08orf00316 | -3 | 14 | 3.914509 | N5-glutamine S-adenosyl-L-methionine-dependent | |
| SB48_HM08orf00320 | -3 | 14 | 3.661557 | stage II sporulation protein R | |
| SB48_HM08orf00323 | -3 | 16 | 4.285406 | Sua5/YciO/YrdC/YwlC family protein | |
| SB48_HM08orf00326 | -2 | 13 | 3.618814 | hypothetical protein | |
| SB48_HM08orf00328 | -2 | 15 | 3.515771 | protein tyrosine phosphatase | |
| SB48_HM08orf00329 | -2 | 14 | 3.353987 | methyl-accepting chemotaxis sensory transducer | |
| SB48_HM08orf00331 | -1 | 13 | 3.713246 | hypothetical protein | |
| SB48_HM08orf00332 | -1 | 13 | 2.987015 | sugar-phosphate isomerase, RpiB/LacA/LacB | |
| SB48_HM08orf00335 | -2 | 12 | 2.224210 | hypothetical protein | |
| SB48_HM08orf00337 | 0 | 15 | 0.536674 | glycine hydroxymethyltransferase | |
| SB48_HM08orf00338 | 2 | 20 | -0.865931 | hypothetical protein | |
| SB48_HM08orf00339 | 1 | 21 | -1.923720 | uracil phosphoribosyltransferase | |
| SB48_HM08orf00340 | 2 | 22 | -3.373347 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00296 | HTHFIS | 107 | 7e-31 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00306 | PF05272 | 32 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00326 | CHANLCOLICIN | 31 | 0.002 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00329 | TYPE4SSCAGA | 29 | 0.046 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| 5 | SB48_HM08orf00505 | SB48_HM08orf00548 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00505 | 0 | 19 | -3.715216 | hypothetical protein | |
| SB48_HM08orf00506 | 0 | 21 | -4.756779 | GMP synthase large subunit | |
| SB48_HM08orf00507 | 5 | 33 | -7.632776 | hypothetical protein | |
| SB48_HM08orf00508 | 3 | 29 | -6.823231 | hypothetical protein | |
| SB48_HM08orf00509 | 1 | 24 | -6.284914 | DNA-binding protein | |
| SB48_HM08orf00510 | 2 | 23 | -5.851599 | major facilitator superfamily protein | |
| SB48_HM08orf00511 | 2 | 18 | -5.676580 | hypothetical protein | |
| SB48_HM08orf00512 | 1 | 16 | -4.362534 | ABC transporter integral membrane protein | |
| SB48_HM08orf00513 | 1 | 16 | -4.015522 | ABC transporter-like protein | |
| SB48_HM08orf00514 | 1 | 14 | -2.371600 | ABC transporter periplasmic protein | |
| SB48_HM08orf00515 | 2 | 18 | -1.156573 | hypothetical protein | |
| SB48_HM08orf00516 | 1 | 15 | 0.632396 | DNA-binding protein | |
| SB48_HM08orf00518 | 1 | 15 | 1.093353 | hypothetical protein | |
| SB48_HM08orf00519 | -1 | 13 | -0.793553 | dehydrogenase | |
| SB48_HM08orf00522 | -1 | 13 | -1.007356 | N-acylglucosamine 2-epimerase | |
| SB48_HM08orf00520 | 1 | 17 | -1.670295 | hypothetical protein | |
| SB48_HM08orf00523 | 1 | 18 | -1.792464 | hypothetical protein | |
| SB48_HM08orf00524 | 5 | 20 | -3.238662 | SirA-like domain-containing protein | |
| SB48_HM08orf00528 | 3 | 19 | -2.734347 | hypothetical protein | |
| SB48_HM08orf00529 | 3 | 20 | -1.899001 | ATPase AAA | |
| SB48_HM08orf00530 | 2 | 19 | -2.139999 | integrase catalytic protein | |
| SB48_HM08orf00531 | 0 | 20 | -3.366067 | hypothetical protein | |
| SB48_HM08orf00532 | -1 | 20 | -3.332837 | Rrf2 family transcriptional regulator | |
| SB48_HM08orf00533 | 0 | 23 | -4.126956 | oxidoreductase | |
| SB48_HM08orf00535 | 1 | 20 | -6.018654 | hypothetical protein | |
| SB48_HM08orf00536 | 2 | 20 | -6.507721 | phenolic acid decarboxylase padC | |
| SB48_HM08orf00537 | 4 | 22 | -6.409582 | PadR-like family transcriptional regulator | |
| SB48_HM08orf00538 | 3 | 21 | -4.594895 | hypothetical protein | |
| SB48_HM08orf00539 | 3 | 21 | -4.597750 | GntR family transcriptional regulator | |
| SB48_HM08orf00540 | -1 | 15 | -2.684113 | ABC transporter-like protein | |
| SB48_HM08orf00541 | -1 | 14 | -0.947102 | membrane protein | |
| SB48_HM08orf00542 | -2 | 13 | 0.402235 | hypothetical protein | |
| SB48_HM08orf00543 | -1 | 14 | 0.530734 | hypothetical protein | |
| SB48_HM08orf00544 | -1 | 12 | 0.041080 | hypothetical protein | |
| SB48_HM08orf00545 | 0 | 14 | -0.360881 | membrane protein | |
| SB48_HM08orf00548 | 3 | 17 | -0.737266 | anion transporter |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00509 | RTXTOXIND | 25 | 0.030 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00510 | TCRTETB | 122 | 7e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00519 | DHBDHDRGNASE | 99 | 2e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00524 | PF01206 | 61 | 1e-16 | SirA family protein | |
>PF01206#SirA family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00533 | NUCEPIMERASE | 31 | 0.003 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00539 | CLENTEROTOXN | 27 | 0.013 | Clostridium enterotoxin signature. | |
>CLENTEROTOXN#Clostridium enterotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00540 | PF05272 | 30 | 0.008 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 6 | SB48_HM08orf00671 | SB48_HM08orf00755 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00671 | 0 | 18 | -4.036292 | glutamyl-tRNA(Gln) amidotransferase subunit A | |
| SB48_HM08orf00673 | 3 | 21 | -6.359714 | glutamyl-tRNA(Gln) amidotransferase subunit B | |
| SB48_HM08orf00675 | 4 | 23 | -7.362387 | hypothetical protein | |
| SB48_HM08orf00676 | 1 | 17 | -4.909359 | hypothetical protein | |
| SB48_HM08orf00678 | 1 | 17 | -4.713099 | general stress protein | |
| SB48_HM08orf00679 | -2 | 12 | -2.478558 | transposase | |
| SB48_HM08orf00680 | -3 | 14 | 3.044403 | hypothetical protein | |
| SB48_HM08orf00681 | -3 | 11 | 0.781214 | N-acetyltransferase | |
| SB48_HM08orf00684 | -3 | 9 | -0.580253 | hypothetical protein | |
| SB48_HM08orf00686 | -1 | 13 | -3.106240 | hypothetical protein | |
| SB48_HM08orf00690 | -1 | 13 | -3.283076 | sodium/proline symporter | |
| SB48_HM08orf00691 | 2 | 21 | -7.634759 | TrmA family RNA methyltransferase | |
| SB48_HM08orf00694 | 3 | 29 | -8.372234 | hypothetical protein | |
| SB48_HM08orf00695 | 3 | 28 | -8.150692 | RNA-binding S4 domain-containing protein | |
| SB48_HM08orf00696 | 4 | 27 | -7.030052 | hypothetical protein | |
| SB48_HM08orf00697 | 2 | 23 | -6.094480 | hypothetical protein | |
| SB48_HM08orf00701 | 3 | 24 | -8.140317 | PRD domain-containing protein | |
| SB48_HM08orf00703 | 3 | 24 | -6.946414 | transposase IS116/IS110/IS902 family protein | |
| SB48_HM08orf00705 | 5 | 31 | -10.813143 | PTS system fructose subfamily transporter | |
| SB48_HM08orf00706 | 4 | 30 | -10.124239 | PTS system sorbose subfamily transporter subunit | |
| SB48_HM08orf00708 | 4 | 30 | -10.653780 | hypothetical protein | |
| SB48_HM08orf00709 | 5 | 29 | -10.715809 | transposase IS4 family protein | |
| SB48_HM08orf00710 | 4 | 30 | -10.680341 | PTS system sorbose subfamily transporter subunit | |
| SB48_HM08orf00711 | 4 | 28 | -9.825871 | PTS system sorbose-specific transporter subunit | |
| SB48_HM08orf00712 | 5 | 29 | -10.212497 | PTS system mannose/fructose/sorbose family | |
| SB48_HM08orf00713 | 7 | 32 | -10.713099 | hypothetical protein | |
| SB48_HM08orf00714 | 7 | 32 | -10.096798 | transposase IS4 family protein | |
| SB48_HM08orf00715 | 6 | 32 | -9.377418 | hypothetical protein | |
| SB48_HM08orf00717 | 6 | 34 | -9.279461 | hypothetical protein | |
| SB48_HM08orf00718 | 6 | 37 | -9.395214 | hypothetical protein | |
| SB48_HM08orf00720 | 6 | 36 | -10.265383 | transposase family protein | |
| SB48_HM08orf00721 | 6 | 35 | -10.104174 | hypothetical protein | |
| SB48_HM08orf00722 | 6 | 34 | -10.457780 | hypothetical protein | |
| SB48_HM08orf00723 | 4 | 30 | -8.297328 | acetoin reductase | |
| SB48_HM08orf00724 | 3 | 26 | -7.754034 | hypothetical protein | |
| SB48_HM08orf00726 | 3 | 23 | -7.620091 | hypothetical protein | |
| SB48_HM08orf00728 | 4 | 24 | -5.168854 | hypothetical protein | |
| SB48_HM08orf00729 | 4 | 19 | -1.045427 | hypothetical protein | |
| SB48_HM08orf00730 | 4 | 17 | -1.432109 | short-chain dehydrogenase | |
| SB48_HM08orf00731 | 3 | 15 | 0.770224 | hypothetical protein | |
| SB48_HM08orf00732 | 2 | 14 | 0.146609 | hypothetical protein | |
| SB48_HM08orf00734 | 1 | 14 | -2.943814 | hypothetical protein | |
| SB48_HM08orf00735 | 1 | 16 | -3.001988 | molecular chaperone GroES | |
| SB48_HM08orf00736 | 0 | 17 | -4.749982 | DNA polymerase beta domain-containing protein | |
| SB48_HM08orf00739 | 0 | 16 | -4.762340 | oxidoreductase | |
| SB48_HM08orf00740 | 6 | 23 | -8.990962 | S-adenosyl-L-methionine-dependent | |
| SB48_HM08orf00741 | 8 | 25 | -9.020369 | transposase IS4 family protein | |
| SB48_HM08orf00742 | 6 | 24 | -6.275026 | hypothetical protein | |
| SB48_HM08orf00744 | 6 | 24 | -6.275026 | hypothetical protein | |
| SB48_HM08orf00745 | 7 | 24 | -7.938347 | hypothetical protein | |
| SB48_HM08orf00746 | 6 | 26 | -8.571028 | hypothetical protein | |
| SB48_HM08orf00747 | 7 | 28 | -8.732368 | hypothetical protein | |
| SB48_HM08orf00748 | 6 | 28 | -9.036697 | hypothetical protein | |
| SB48_HM08orf00750 | 7 | 36 | -13.601988 | hypothetical protein | |
| SB48_HM08orf00751 | 5 | 30 | -11.592531 | transposase IS4 family protein | |
| SB48_HM08orf00752 | 0 | 30 | -9.033822 | hypothetical protein | |
| SB48_HM08orf00753 | 0 | 25 | -6.210896 | hypothetical protein | |
| SB48_HM08orf00754 | 1 | 21 | -3.920725 | hypothetical protein | |
| SB48_HM08orf00755 | -1 | 13 | -3.897846 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00696 | ISCHRISMTASE | 39 | 3e-06 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00723 | DHBDHDRGNASE | 120 | 3e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00724 | TCRTETA | 81 | 7e-19 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00730 | DHBDHDRGNASE | 127 | 1e-37 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 7 | SB48_HM08orf00806 | SB48_HM08orf00952 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00806 | 0 | 22 | -3.662752 | deoxyribose-phosphate aldolase | |
| SB48_HM08orf00808 | 1 | 24 | -5.043758 | cytidine deaminase | |
| SB48_HM08orf00810 | 1 | 25 | -5.366082 | hypothetical protein | |
| SB48_HM08orf00811 | -1 | 19 | -3.848504 | 5-methyltetrahydropteroyltriglutamate-- | |
| SB48_HM08orf00812 | 2 | 20 | -3.951807 | hypothetical protein | |
| SB48_HM08orf00813 | -2 | 12 | -2.381162 | hypothetical protein | |
| SB48_HM08orf00814 | -2 | 12 | 1.254015 | hypothetical protein | |
| SB48_HM08orf00815 | -1 | 11 | 2.663512 | hypothetical protein | |
| SB48_HM08orf00819 | -1 | 12 | 2.780049 | guanosine monophosphate reductase | |
| SB48_HM08orf00820 | -1 | 12 | 3.122832 | hypothetical protein | |
| SB48_HM08orf00822 | -1 | 13 | 3.259678 | aliphatic sulfonates family ABC transporter | |
| SB48_HM08orf00823 | -2 | 14 | 3.430979 | alkanesulfonate monooxygenase | |
| SB48_HM08orf00824 | -1 | 14 | 0.194650 | ABC transporter integral membrane protein | |
| SB48_HM08orf00825 | 0 | 13 | -2.214319 | ABC transporter-like protein | |
| SB48_HM08orf00826 | 2 | 15 | -3.447082 | FMN reductase | |
| SB48_HM08orf00828 | 1 | 14 | -3.352906 | hypothetical protein | |
| SB48_HM08orf00830 | 1 | 15 | -3.404619 | nitrilase/cyanide hydratase and apolipoprotein | |
| SB48_HM08orf00832 | 2 | 18 | -4.937309 | hypothetical protein | |
| SB48_HM08orf00833 | 2 | 17 | -4.474777 | ATPase | |
| SB48_HM08orf00834 | 0 | 17 | -4.398448 | hypothetical protein | |
| SB48_HM08orf00835 | -2 | 18 | -4.534497 | auxin efflux carrier | |
| SB48_HM08orf00836 | 3 | 22 | -6.734018 | hypothetical protein | |
| SB48_HM08orf00838 | 3 | 24 | -7.232940 | hypothetical protein | |
| SB48_HM08orf00839 | 3 | 24 | -6.241890 | hypothetical protein | |
| SB48_HM08orf00840 | -1 | 20 | -4.056183 | hypothetical protein | |
| SB48_HM08orf00841 | -1 | 16 | -0.120279 | hypothetical protein | |
| SB48_HM08orf00843 | -1 | 12 | 0.486569 | hypothetical protein | |
| SB48_HM08orf00845 | -2 | 11 | 0.309380 | hypothetical protein | |
| SB48_HM08orf00846 | -2 | 11 | 0.331679 | aldehyde dehydrogenase | |
| SB48_HM08orf00847 | -2 | 12 | 0.530290 | hypothetical protein | |
| SB48_HM08orf00849 | 0 | 14 | 0.991711 | amidase | |
| SB48_HM08orf00850 | 0 | 18 | -2.996789 | hypothetical protein | |
| SB48_HM08orf00852 | 3 | 22 | -5.546621 | hypothetical protein | |
| SB48_HM08orf00853 | 3 | 24 | -5.044068 | hypothetical protein | |
| SB48_HM08orf00855 | 2 | 19 | -3.421712 | hypothetical protein | |
| SB48_HM08orf00859 | 0 | 16 | -2.332470 | peptidase P60 | |
| SB48_HM08orf00860 | 0 | 16 | -3.263642 | transposase IS4 | |
| SB48_HM08orf00861 | -1 | 14 | -2.002951 | HAD-superfamily hydrolase | |
| SB48_HM08orf00862 | 1 | 15 | -1.816503 | MarR family transcriptional regulator | |
| SB48_HM08orf00863 | 0 | 14 | -0.871098 | ABC transporter | |
| SB48_HM08orf00866 | 2 | 17 | -1.374833 | multidrug ABC transporter ATP-binding protein | |
| SB48_HM08orf00867 | 4 | 21 | -1.435006 | hypothetical protein | |
| SB48_HM08orf00868 | 1 | 17 | 0.793086 | hypothetical protein | |
| SB48_HM08orf00869 | -1 | 15 | 1.714417 | RNA-directed DNA polymerase | |
| SB48_HM08orf00870 | -1 | 14 | 3.121506 | hypothetical protein | |
| SB48_HM08orf00871 | -1 | 15 | 2.301255 | hypothetical protein | |
| SB48_HM08orf00872 | 0 | 14 | 2.406016 | transposase IS116/IS110/IS902 family protein | |
| SB48_HM08orf00874 | 1 | 17 | 0.039650 | beta-lactamase | |
| SB48_HM08orf00875 | 1 | 20 | -1.987508 | beta-N-acetylhexosaminidase | |
| SB48_HM08orf00879 | 7 | 30 | -4.992716 | hypothetical protein | |
| SB48_HM08orf00880 | 7 | 31 | -4.761761 | hypothetical protein | |
| SB48_HM08orf00881 | 7 | 34 | -6.763500 | hypothetical protein | |
| SB48_HM08orf00885 | 7 | 31 | -6.147249 | hypothetical protein | |
| SB48_HM08orf00886 | 4 | 26 | -7.144611 | hypothetical protein | |
| SB48_HM08orf00887 | 3 | 25 | -6.385233 | hypothetical protein | |
| SB48_HM08orf00891 | 1 | 21 | -6.334720 | cold-shock protein | |
| SB48_HM08orf00892 | 2 | 20 | -6.027544 | hypothetical protein | |
| SB48_HM08orf00893 | 0 | 16 | -4.392841 | beta-ketoacyl synthase | |
| SB48_HM08orf00894 | -1 | 18 | -5.128766 | histidine kinase | |
| SB48_HM08orf00895 | -1 | 22 | -1.935321 | hypothetical protein | |
| SB48_HM08orf00896 | -1 | 22 | -3.712311 | hypothetical protein | |
| SB48_HM08orf00898 | -2 | 18 | -3.434560 | hypothetical protein | |
| SB48_HM08orf00901 | -1 | 19 | -3.425117 | PTS glucitol transporter subunit IIA | |
| SB48_HM08orf00902 | -1 | 21 | -2.522714 | hypothetical protein | |
| SB48_HM08orf00904 | -1 | 20 | -2.490877 | hypothetical protein | |
| SB48_HM08orf00905 | -1 | 17 | -1.581849 | hypothetical protein | |
| SB48_HM08orf00907 | 0 | 15 | -0.717963 | LacI family transcriptional regulator | |
| SB48_HM08orf00908 | 1 | 16 | -0.259421 | ribulose-phosphate 3-epimerase | |
| SB48_HM08orf00910 | 1 | 15 | -0.498989 | PfkB domain-containing protein | |
| SB48_HM08orf00911 | 2 | 20 | -1.755209 | hypothetical protein | |
| SB48_HM08orf00912 | 2 | 19 | -1.911511 | copper resistance protein CopC | |
| SB48_HM08orf00913 | 7 | 26 | -3.675248 | nuclear export factor GLE1 | |
| SB48_HM08orf00915 | 8 | 26 | -5.060898 | hypothetical protein | |
| SB48_HM08orf00916 | 10 | 28 | -5.780251 | hypothetical protein | |
| SB48_HM08orf00917 | 7 | 27 | -4.084444 | hypothetical protein | |
| SB48_HM08orf00918 | 4 | 25 | -2.628903 | pyridoxamine 5-phosphate oxidase-like | |
| SB48_HM08orf00922 | 4 | 25 | -2.158137 | hypothetical protein | |
| SB48_HM08orf00923 | 2 | 21 | -2.991523 | hypothetical protein | |
| SB48_HM08orf00925 | 1 | 23 | -3.009710 | hypothetical protein | |
| SB48_HM08orf00927 | 1 | 23 | -3.248717 | LacI family transcriptional regulator | |
| SB48_HM08orf00928 | 0 | 23 | -2.900322 | ribokinase | |
| SB48_HM08orf00929 | 0 | 20 | -1.814548 | RbsD or FucU transport | |
| SB48_HM08orf00931 | -1 | 19 | -1.803742 | ABC transporter-like protein | |
| SB48_HM08orf00932 | -1 | 18 | -1.104268 | ABC transporter integral membrane protein | |
| SB48_HM08orf00934 | -2 | 18 | -0.582548 | periplasmic binding protein/LacI transcriptional | |
| SB48_HM08orf00936 | -2 | 16 | 0.314375 | gluconate:proton symporter | |
| SB48_HM08orf00937 | -3 | 17 | 0.067077 | glycerate kinase | |
| SB48_HM08orf00940 | -2 | 19 | -3.037016 | hypothetical protein | |
| SB48_HM08orf00942 | 0 | 22 | -3.155579 | hypothetical protein | |
| SB48_HM08orf00943 | -1 | 23 | -3.018600 | alcohol dehydrogenase zinc-binding | |
| SB48_HM08orf00944 | 0 | 23 | -3.762794 | hypothetical protein | |
| SB48_HM08orf00946 | 1 | 29 | -5.166916 | hypothetical protein | |
| SB48_HM08orf00948 | 1 | 23 | -3.940529 | ribonucleoside triphosphate reductase | |
| SB48_HM08orf00949 | 1 | 23 | -2.237271 | hypothetical protein | |
| SB48_HM08orf00950 | -1 | 20 | -2.001400 | anaerobic ribonucleoside-triphosphate reductase | |
| SB48_HM08orf00951 | 1 | 20 | -1.841956 | hypothetical protein | |
| SB48_HM08orf00952 | 1 | 20 | -3.077141 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00832 | cloacin | 31 | 0.007 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00847 | TCRTETA | 69 | 8e-15 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00859 | BINARYTOXINB | 30 | 0.033 | Binary toxin B family signature. | |
>BINARYTOXINB#Binary toxin B family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00870 | NUCEPIMERASE | 35 | 5e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00874 | PF07675 | 32 | 0.006 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00885 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00907 | HTHTETR | 29 | 0.021 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00913 | adhesinb | 31 | 0.005 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00916 | FLGFLIH | 36 | 1e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00917 | FLGFLIH | 34 | 4e-05 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00925 | FLGFLIH | 27 | 0.002 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00934 | SUBTILISIN | 31 | 0.007 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00936 | RTXTOXINA | 30 | 0.027 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00937 | TYPE4SSCAGA | 31 | 0.012 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00940 | HTHFIS | 36 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 8 | SB48_HM08orf00998 | SB48_HM08orf01040 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00998 | 2 | 16 | -1.732412 | FMN reductase | |
| SB48_HM08orf00999 | 2 | 16 | -2.055649 | hypothetical protein | |
| SB48_HM08orf01000 | 4 | 20 | -2.683555 | hypothetical protein | |
| SB48_HM08orf01001 | 5 | 21 | -3.928328 | hypothetical protein | |
| SB48_HM08orf01002 | 6 | 29 | -5.607802 | cysteine synthase | |
| SB48_HM08orf01004 | 8 | 32 | -9.561584 | hypothetical protein | |
| SB48_HM08orf01005 | 7 | 36 | -10.425368 | hypothetical protein | |
| SB48_HM08orf01006 | 11 | 38 | -11.739126 | hypothetical protein | |
| SB48_HM08orf01007 | 9 | 37 | -11.443992 | hypothetical protein | |
| SB48_HM08orf01008 | 8 | 37 | -11.500218 | hypothetical protein | |
| SB48_HM08orf01009 | 8 | 36 | -11.851146 | hypothetical protein | |
| SB48_HM08orf01012 | 8 | 36 | -12.265982 | transposase IS4 | |
| SB48_HM08orf01013 | 5 | 31 | -9.345651 | hypothetical protein | |
| SB48_HM08orf01014 | 6 | 32 | -9.265303 | hypothetical protein | |
| SB48_HM08orf01016 | 6 | 30 | -8.253588 | hypothetical protein | |
| SB48_HM08orf01017 | 5 | 26 | -7.171742 | hypothetical protein | |
| SB48_HM08orf01018 | 6 | 24 | -6.620135 | hypothetical protein | |
| SB48_HM08orf01019 | 6 | 24 | -6.437237 | type I restriction-modification system, M | |
| SB48_HM08orf01020 | 5 | 23 | -6.494317 | type 11 methyltransferase | |
| SB48_HM08orf01021 | 4 | 18 | -5.293128 | HsdR family type I site-specific | |
| SB48_HM08orf01024 | 1 | 14 | -3.174309 | ATPase | |
| SB48_HM08orf01026 | -1 | 14 | -0.546984 | 5-methylcytosine restriction system | |
| SB48_HM08orf01027 | -4 | 15 | 0.998359 | hypothetical protein | |
| SB48_HM08orf01029 | -3 | 17 | 2.594806 | hypothetical protein | |
| SB48_HM08orf01030 | 0 | 23 | 5.120117 | fructose-bisphosphate aldolase | |
| SB48_HM08orf01032 | 0 | 24 | 5.720949 | major facilitator superfamily protein | |
| SB48_HM08orf01034 | 1 | 26 | 5.701495 | respiratory nitrate reductase subunit gamma | |
| SB48_HM08orf01035 | 0 | 24 | 5.515442 | nitrate reductase molybdenum cofactor assembly | |
| SB48_HM08orf01037 | 0 | 25 | 5.667260 | nitrate reductase | |
| SB48_HM08orf01040 | -1 | 21 | 4.614188 | nitrate reductase subunit alpha |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01032 | TCRTETA | 47 | 6e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01037 | TACYTOLYSIN | 30 | 0.025 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| 9 | SB48_HM08orf01062 | SB48_HM08orf01129 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01062 | 4 | 32 | -4.968354 | hypothetical protein | |
| SB48_HM08orf01063 | 4 | 33 | -6.390598 | transketolase | |
| SB48_HM08orf01064 | 5 | 35 | -8.342165 | transaldolase | |
| SB48_HM08orf01065 | 7 | 41 | -9.127715 | RpiB/LacA/LacB family sugar-phosphate isomerase | |
| SB48_HM08orf01066 | 7 | 41 | -9.264335 | hypothetical protein | |
| SB48_HM08orf01067 | 6 | 41 | -9.205421 | 3-hydroxybutyryl-CoA dehydrogenase | |
| SB48_HM08orf01069 | 6 | 38 | -8.615569 | transposase family protein | |
| SB48_HM08orf01070 | 6 | 36 | -7.651988 | IS4 family transposase | |
| SB48_HM08orf01071 | 5 | 38 | -6.798066 | hypothetical protein | |
| SB48_HM08orf01072 | 3 | 33 | -6.557198 | dihydroxyacetone kinase subunit DhaL | |
| SB48_HM08orf01074 | 0 | 22 | -4.466465 | hypothetical protein | |
| SB48_HM08orf01075 | 1 | 24 | -4.087683 | deoC/LacD aldolase family protein | |
| SB48_HM08orf01076 | 0 | 22 | -4.108616 | Glycerone kinase | |
| SB48_HM08orf01077 | -2 | 12 | -1.677697 | hypothetical protein | |
| SB48_HM08orf01078 | -2 | 13 | 0.136421 | hypothetical protein | |
| SB48_HM08orf01079 | -1 | 15 | 1.821315 | ATPase AAA | |
| SB48_HM08orf01080 | -1 | 14 | 4.097788 | hypothetical protein | |
| SB48_HM08orf01081 | -1 | 14 | 4.784019 | hypothetical protein | |
| SB48_HM08orf01082 | 0 | 13 | 4.615992 | AMP-dependent synthetase/ligase | |
| SB48_HM08orf01084 | 1 | 16 | 5.144133 | hypothetical protein | |
| SB48_HM08orf01086 | 0 | 17 | 5.038631 | hypothetical protein | |
| SB48_HM08orf01088 | 0 | 17 | 5.533489 | acetyl-CoA synthetase | |
| SB48_HM08orf01091 | 1 | 18 | 6.027168 | acyl-CoA dehydrogenase | |
| SB48_HM08orf01092 | 1 | 18 | 6.094085 | hypothetical protein | |
| SB48_HM08orf01097 | 1 | 17 | 5.612391 | biotin carboxylase | |
| SB48_HM08orf01098 | -1 | 15 | 4.845306 | acetyl-CoA carboxylase | |
| SB48_HM08orf01099 | 0 | 13 | 4.772958 | hydroxymethylglutaryl-CoA lyase | |
| SB48_HM08orf01101 | 1 | 12 | 3.806597 | 3-hydroxybutyryl-CoA dehydratase | |
| SB48_HM08orf01102 | 0 | 15 | 1.381177 | carboxyl transferase | |
| SB48_HM08orf01104 | -1 | 23 | -5.376082 | GCN5-like N-acetyltransferase | |
| SB48_HM08orf01106 | 0 | 26 | -5.268654 | hypothetical protein | |
| SB48_HM08orf01108 | 2 | 23 | -3.676062 | FAD-dependent pyridine nucleotide-disulfide | |
| SB48_HM08orf01110 | -2 | 17 | -1.431602 | hypothetical protein | |
| SB48_HM08orf01111 | -2 | 18 | -1.181712 | hypothetical protein | |
| SB48_HM08orf01112 | -2 | 13 | 0.638672 | hypothetical protein | |
| SB48_HM08orf01113 | -2 | 14 | 1.292153 | 30S ribosomal protein S14 | |
| SB48_HM08orf01115 | -2 | 13 | 1.801895 | hypothetical protein | |
| SB48_HM08orf01117 | -2 | 12 | 2.075622 | UvrD/REP helicase | |
| SB48_HM08orf01119 | 0 | 13 | 3.209292 | hypothetical protein | |
| SB48_HM08orf01122 | -1 | 16 | 3.215736 | xanthine permease | |
| SB48_HM08orf01123 | -2 | 17 | 2.851459 | hypothetical protein | |
| SB48_HM08orf01124 | -3 | 15 | 2.962964 | hypothetical protein | |
| SB48_HM08orf01125 | -3 | 17 | 2.534376 | hypothetical protein | |
| SB48_HM08orf01126 | -1 | 16 | 1.970403 | hypothetical protein | |
| SB48_HM08orf01127 | 0 | 16 | 1.120711 | amino acid permease | |
| SB48_HM08orf01128 | 2 | 19 | -0.838830 | hypothetical protein | |
| SB48_HM08orf01129 | 2 | 21 | -0.731133 | FMN reductase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01071 | TCRTETA | 55 | 2e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01079 | HTHFIS | 410 | e-142 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01098 | RTXTOXIND | 31 | 2e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01104 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| 10 | SB48_HM08orf01195 | SB48_HM08orf01206 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01195 | -1 | 17 | -3.973591 | nitroreductase | |
| SB48_HM08orf01197 | -1 | 18 | -4.450394 | helicase SNF2 | |
| SB48_HM08orf01199 | 2 | 31 | -7.606462 | hypothetical protein | |
| SB48_HM08orf01200 | 3 | 31 | -7.624157 | hypothetical protein | |
| SB48_HM08orf01201 | 4 | 32 | -7.078651 | CRISPR-associated protein | |
| SB48_HM08orf01202 | 3 | 31 | -7.033240 | CRISPR-associated protein Cas8 | |
| SB48_HM08orf01203 | 3 | 28 | -6.016983 | CRISPR-associated protein | |
| SB48_HM08orf01205 | 2 | 24 | -4.738068 | CRISPR-associated protein Cas4 | |
| SB48_HM08orf01206 | 2 | 23 | -3.715916 | CRISPR-associated protein Cas1 |
| 11 | SB48_HM08orf01283 | SB48_HM08orf01296 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01283 | -1 | 18 | -3.168160 | TrmA family RNA methyltransferase | |
| SB48_HM08orf01284 | 0 | 28 | -6.119940 | hypothetical protein | |
| SB48_HM08orf01285 | 0 | 28 | -5.971466 | hypothetical protein | |
| SB48_HM08orf01286 | 0 | 28 | -6.119470 | MarR family transcriptional regulator | |
| SB48_HM08orf01288 | 0 | 29 | -6.960012 | ABC transporter-like protein | |
| SB48_HM08orf01290 | 1 | 26 | -6.446024 | ATPase AAA | |
| SB48_HM08orf01292 | 2 | 23 | -6.291772 | hypothetical protein | |
| SB48_HM08orf01293 | 2 | 24 | -5.659404 | hypothetical protein | |
| SB48_HM08orf01294 | 1 | 21 | -4.431334 | hypothetical protein | |
| SB48_HM08orf01296 | 1 | 21 | -3.754659 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01288 | ACRIFLAVINRP | 31 | 0.020 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| 12 | SB48_HM08orf01312 | SB48_HM08orf01344 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01312 | 1 | 16 | -3.405909 | general substrate transporter | |
| SB48_HM08orf01313 | 1 | 18 | -4.155538 | hypothetical protein | |
| SB48_HM08orf01315 | -1 | 14 | -2.277907 | hypothetical protein | |
| SB48_HM08orf01316 | 0 | 15 | -2.398932 | hypothetical protein | |
| SB48_HM08orf01318 | 0 | 14 | -2.156975 | hypothetical protein | |
| SB48_HM08orf01319 | -1 | 13 | -2.226506 | membrane protein | |
| SB48_HM08orf01321 | 2 | 11 | -0.405353 | membrane protein | |
| SB48_HM08orf01323 | 1 | 11 | -0.156945 | sodium:dicarboxylate symporter | |
| SB48_HM08orf01324 | 1 | 11 | -0.655205 | hypothetical protein | |
| SB48_HM08orf01325 | 2 | 13 | -1.153428 | membrane protein | |
| SB48_HM08orf01326 | 1 | 14 | 0.003455 | XRE family transcriptional regulator | |
| SB48_HM08orf01328 | 2 | 9 | 0.716934 | hypothetical protein | |
| SB48_HM08orf01330 | 1 | 9 | 0.619636 | methyl-accepting chemotaxis sensory transducer | |
| SB48_HM08orf01332 | 1 | 10 | 0.924690 | hypothetical protein | |
| SB48_HM08orf01335 | 1 | 10 | 0.818653 | hypothetical protein | |
| SB48_HM08orf01336 | 1 | 11 | 1.266291 | hypothetical protein | |
| SB48_HM08orf01339 | 1 | 12 | 0.985634 | chromosome segregation ATPase | |
| SB48_HM08orf01340 | -1 | 12 | 1.391451 | hypothetical protein | |
| SB48_HM08orf01341 | 1 | 14 | 1.419812 | hypothetical protein | |
| SB48_HM08orf01343 | 3 | 17 | 0.890766 | hypothetical protein | |
| SB48_HM08orf01344 | 3 | 16 | 1.011539 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01312 | TCRTETA | 53 | 1e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01330 | CHANLCOLICIN | 32 | 0.010 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01339 | CHANLCOLICIN | 41 | 3e-05 | Channel forming colicin signature. | |
>CHANLCOLICIN#Channel forming colicin signature. | |||||
| 13 | SB48_HM08orf01374 | SB48_HM08orf01396 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01374 | -1 | 15 | 4.542940 | branched-chain amino acid transport system II | |
| SB48_HM08orf01376 | -1 | 15 | 4.765828 | hypothetical protein | |
| SB48_HM08orf01377 | -2 | 14 | 4.501953 | hypothetical protein | |
| SB48_HM08orf01378 | -2 | 14 | 4.199847 | dihydroxy-acid dehydratase | |
| SB48_HM08orf01380 | -2 | 14 | 3.965357 | hypothetical protein | |
| SB48_HM08orf01382 | -2 | 13 | 4.496338 | acetolactate synthase large subunit, | |
| SB48_HM08orf01383 | -2 | 10 | 3.182548 | acetolactate synthase small subunit | |
| SB48_HM08orf01386 | -2 | 10 | 3.071947 | ketol-acid reductoisomerase | |
| SB48_HM08orf01388 | -2 | 9 | 2.985894 | 2-isopropylmalate synthase | |
| SB48_HM08orf01389 | -2 | 10 | 2.866695 | 3-isopropylmalate dehydrogenase | |
| SB48_HM08orf01390 | -1 | 11 | 2.864095 | isopropylmalate isomerase | |
| SB48_HM08orf01393 | -1 | 13 | 2.334622 | isopropylmalate isomerase | |
| SB48_HM08orf01394 | 0 | 13 | 3.488197 | threonine dehydratase | |
| SB48_HM08orf01396 | -1 | 14 | 3.384222 | haloacid dehalogenase |
| 14 | SB48_HM08orf01415 | SB48_HM08orf01448 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01415 | -1 | 25 | -5.659279 | aldehyde dehydrogenase | |
| SB48_HM08orf01416 | 2 | 31 | -7.940612 | hypothetical protein | |
| SB48_HM08orf01418 | 2 | 30 | -8.177459 | polyprenyl synthetase | |
| SB48_HM08orf01419 | 3 | 28 | -6.792542 | hypothetical protein | |
| SB48_HM08orf01420 | 3 | 27 | -5.865297 | hypothetical protein | |
| SB48_HM08orf01421 | 5 | 29 | -3.926471 | signal transduction histidine kinase | |
| SB48_HM08orf01422 | 7 | 33 | -3.852317 | two component LuxR family transcriptional | |
| SB48_HM08orf01424 | 9 | 33 | -2.480938 | hypothetical protein | |
| SB48_HM08orf01425 | 7 | 37 | -8.438548 | ABC transporter-like protein | |
| SB48_HM08orf01426 | 6 | 38 | -10.420453 | hypothetical protein | |
| SB48_HM08orf01427 | 7 | 41 | -11.934316 | hypothetical protein | |
| SB48_HM08orf01428 | 8 | 47 | -17.550789 | hypothetical protein | |
| SB48_HM08orf01429 | 6 | 41 | -14.376652 | circular bacteriocin | |
| SB48_HM08orf01430 | 5 | 39 | -13.457955 | hypothetical protein | |
| SB48_HM08orf01431 | 2 | 33 | -8.448784 | ABC transporter-like protein | |
| SB48_HM08orf01432 | 2 | 32 | -7.435055 | hypothetical protein | |
| SB48_HM08orf01433 | 1 | 30 | -5.631617 | hypothetical protein | |
| SB48_HM08orf01435 | -2 | 18 | -2.145034 | hypothetical protein | |
| SB48_HM08orf01436 | -2 | 15 | -0.558509 | ABC transporter-like protein | |
| SB48_HM08orf01437 | -1 | 14 | 1.807031 | cell division protein FtsX | |
| SB48_HM08orf01438 | 2 | 15 | 4.185660 | hypothetical protein | |
| SB48_HM08orf01441 | 1 | 16 | 4.639618 | hypothetical protein | |
| SB48_HM08orf01443 | 1 | 16 | 4.826466 | anthranilate synthase subunit I | |
| SB48_HM08orf01444 | 1 | 15 | 5.301569 | anthranilate synthase subunit II | |
| SB48_HM08orf01445 | 2 | 16 | 5.377564 | anthranilate phosphoribosyltransferase | |
| SB48_HM08orf01446 | 2 | 14 | 4.562264 | Indole-3-glycerol phosphate synthase | |
| SB48_HM08orf01447 | 2 | 19 | 4.121761 | tryptophan synthase subunit beta | |
| SB48_HM08orf01448 | 3 | 17 | 1.795228 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01422 | HTHFIS | 60 | 6e-13 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01435 | RTXTOXIND | 48 | 4e-08 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| 15 | SB48_HM08orf01461 | SB48_HM08orf01477 | Y ![]() | N | Y | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01461 | 0 | 19 | -4.047297 | hypothetical protein | |
| SB48_HM08orf01466 | 0 | 20 | -4.436890 | A/G-specific adenine glycosylase | |
| SB48_HM08orf01468 | 1 | 24 | -5.995015 | hypothetical protein | |
| SB48_HM08orf01470 | 0 | 19 | -3.562110 | small, acid-soluble spore protein K | |
| SB48_HM08orf01471 | 0 | 20 | -3.824210 | ABC transporter-like protein | |
| SB48_HM08orf01472 | -3 | 15 | 1.338376 | transposase IS4 family protein | |
| SB48_HM08orf01475 | -3 | 14 | 2.618548 | hypothetical protein | |
| SB48_HM08orf01476 | -2 | 14 | 3.340576 | hypothetical protein | |
| SB48_HM08orf01477 | -2 | 14 | 3.281290 | glutamate synthase, NADH/NADPH small subunit |
| 16 | SB48_HM08orf01535 | SB48_HM08orf01585 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01535 | 3 | 22 | -0.194580 | hypothetical protein | |
| SB48_HM08orf01536 | 3 | 19 | 0.299225 | hypothetical protein | |
| SB48_HM08orf01539 | 3 | 20 | -0.051525 | *alcohol dehydrogenase | |
| SB48_HM08orf01540 | 5 | 21 | -1.761576 | hypothetical protein | |
| SB48_HM08orf01542 | 2 | 17 | -0.893432 | hypothetical protein | |
| SB48_HM08orf01543 | 3 | 25 | -2.482316 | hypothetical protein | |
| SB48_HM08orf01544 | 3 | 29 | -5.301855 | transporter | |
| SB48_HM08orf01546 | 3 | 34 | -6.303267 | hypothetical protein | |
| SB48_HM08orf01547 | 5 | 32 | -5.533565 | hypothetical protein | |
| SB48_HM08orf01550 | 5 | 31 | -5.741251 | major facilitator superfamily protein | |
| SB48_HM08orf01552 | 8 | 35 | -7.106346 | major facilitator superfamily protein | |
| SB48_HM08orf01554 | 7 | 28 | -6.689843 | hypothetical protein | |
| SB48_HM08orf01555 | 7 | 24 | -5.143938 | hypothetical protein | |
| SB48_HM08orf01556 | 7 | 24 | -5.604588 | hypothetical protein | |
| SB48_HM08orf01557 | 5 | 28 | -7.530559 | membrane protein | |
| SB48_HM08orf01558 | 5 | 24 | -5.990835 | hypothetical protein | |
| SB48_HM08orf01561 | 5 | 25 | -6.971528 | transposase IS4 family protein | |
| SB48_HM08orf01562 | 6 | 30 | -6.223577 | MarR family transcriptional regulator | |
| SB48_HM08orf01563 | 5 | 30 | -5.582223 | hypothetical protein | |
| SB48_HM08orf01564 | 5 | 30 | -5.839675 | hypothetical protein | |
| SB48_HM08orf01566 | 5 | 30 | -6.009991 | hypothetical protein | |
| SB48_HM08orf01567 | 6 | 33 | -8.368135 | ABC transporter ATP-binding protein | |
| SB48_HM08orf01568 | 5 | 33 | -7.711440 | hypothetical protein | |
| SB48_HM08orf01569 | 4 | 30 | -8.761139 | peptide ABC transporter permease | |
| SB48_HM08orf01570 | 5 | 27 | -9.898284 | hypothetical protein | |
| SB48_HM08orf01572 | 1 | 18 | -5.988173 | hypothetical protein | |
| SB48_HM08orf01573 | 1 | 17 | -4.504813 | transposase IS4 family protein | |
| SB48_HM08orf01574 | 0 | 17 | -1.688173 | hypothetical protein | |
| SB48_HM08orf01575 | 1 | 15 | -4.238692 | hypothetical protein | |
| SB48_HM08orf01576 | 1 | 17 | -5.157912 | hypothetical protein | |
| SB48_HM08orf01579 | 2 | 19 | -5.622821 | integral membrane sensor signal transduction | |
| SB48_HM08orf01580 | 5 | 28 | -8.735463 | winged helix family two component | |
| SB48_HM08orf01581 | 6 | 30 | -10.812927 | hypothetical protein | |
| SB48_HM08orf01582 | 5 | 30 | -10.951069 | hypothetical protein | |
| SB48_HM08orf01583 | 4 | 34 | -10.382881 | hypothetical protein | |
| SB48_HM08orf01584 | 3 | 28 | -7.752002 | transposase IS4 family protein | |
| SB48_HM08orf01585 | -2 | 19 | -5.143779 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01550 | TCRTETA | 40 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01552 | TCRTETA | 38 | 5e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01562 | FLGMRINGFLIF | 27 | 0.045 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01579 | PF06580 | 32 | 0.004 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01580 | HTHFIS | 101 | 3e-27 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01582 | FLGFLIH | 37 | 7e-05 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 17 | SB48_HM08orf01687 | SB48_HM08orf01745 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01687 | 3 | 24 | -4.150768 | hypothetical protein | |
| SB48_HM08orf01688 | 3 | 24 | -3.670015 | hypothetical protein | |
| SB48_HM08orf01689 | 4 | 26 | -3.887193 | hypothetical protein | |
| SB48_HM08orf01690 | -1 | 14 | 0.183059 | hypothetical protein | |
| SB48_HM08orf01692 | -1 | 13 | 0.652529 | methyl-accepting chemotaxis sensory transducer | |
| SB48_HM08orf01694 | -1 | 14 | 2.134173 | hypothetical protein | |
| SB48_HM08orf01695 | -1 | 13 | 2.398012 | hypothetical protein | |
| SB48_HM08orf01697 | -1 | 13 | 2.255618 | hypothetical protein | |
| SB48_HM08orf01698 | 0 | 11 | 2.035646 | oxidoreductase | |
| SB48_HM08orf01699 | 2 | 13 | 1.417169 | hypothetical protein | |
| SB48_HM08orf01702 | 0 | 12 | 1.673375 | hypothetical protein | |
| SB48_HM08orf01703 | -1 | 18 | 0.191989 | hypothetical protein | |
| SB48_HM08orf01704 | 0 | 22 | 0.207246 | hypothetical protein | |
| SB48_HM08orf01706 | 0 | 21 | 0.408457 | RNA polymerase sigma54 factor | |
| SB48_HM08orf01708 | 1 | 28 | 0.753243 | glutaredoxin | |
| SB48_HM08orf01710 | 1 | 29 | 0.888430 | DeoR family transcriptional regulator | |
| SB48_HM08orf01711 | 3 | 38 | 0.219151 | glyceraldehyde-3-phosphate dehydrogenase | |
| SB48_HM08orf01714 | 1 | 32 | 0.615456 | phosphoglycerate kinase | |
| SB48_HM08orf01715 | 0 | 29 | 0.038742 | triosephosphate isomerase | |
| SB48_HM08orf01716 | 2 | 24 | -0.121596 | phosphoglycerate mutase | |
| SB48_HM08orf01717 | 3 | 25 | -1.203996 | hypothetical protein | |
| SB48_HM08orf01719 | 3 | 25 | -1.598294 | enolase | |
| SB48_HM08orf01720 | 4 | 24 | -1.763290 | hypothetical protein | |
| SB48_HM08orf01722 | -1 | 11 | -0.449501 | hypothetical protein | |
| SB48_HM08orf01723 | -2 | 11 | 0.226949 | hypothetical protein | |
| SB48_HM08orf01724 | -2 | 13 | -0.698762 | preprotein translocase subunit SecG | |
| SB48_HM08orf01725 | -3 | 13 | -0.314413 | hypothetical protein | |
| SB48_HM08orf01727 | -3 | 13 | -0.932004 | carboxylesterase | |
| SB48_HM08orf01728 | -3 | 13 | -0.964247 | ribonuclease R | |
| SB48_HM08orf01732 | 0 | 17 | -3.033512 | SsrA-binding protein | |
| SB48_HM08orf01733 | 0 | 18 | -3.880894 | hypothetical protein | |
| SB48_HM08orf01735 | 1 | 20 | -3.631898 | glycosyl transferase family protein | |
| SB48_HM08orf01736 | 1 | 21 | -2.888824 | hypothetical protein | |
| SB48_HM08orf01738 | 1 | 22 | -1.878541 | hypothetical protein | |
| SB48_HM08orf01739 | 1 | 27 | -2.031106 | hypothetical protein | |
| SB48_HM08orf01740 | 2 | 25 | -1.050034 | hypothetical protein | |
| SB48_HM08orf01742 | 2 | 22 | -1.348346 | hypothetical protein | |
| SB48_HM08orf01743 | 2 | 23 | -1.290207 | peptidase S8 and S53 subtilisin kexin sedolisin | |
| SB48_HM08orf01745 | 3 | 20 | -3.434677 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01716 | FRAGILYSIN | 29 | 0.048 | Fragilysin metallopeptidase (M10C) enterotoxin signat... | |
>FRAGILYSIN#Fragilysin metallopeptidase (M10C) enterotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01724 | SECGEXPORT | 43 | 3e-09 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01735 | BCTERIALGSPD | 35 | 6e-04 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01743 | SUBTILISIN | 53 | 6e-10 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| 18 | SB48_HM08orf01811 | SB48_HM08orf01838 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01811 | 0 | 19 | 3.136829 | cell cycle protein | |
| SB48_HM08orf01813 | 1 | 19 | 4.294367 | hypothetical protein | |
| SB48_HM08orf01816 | 2 | 23 | 4.116336 | hypothetical protein | |
| SB48_HM08orf01818 | 2 | 23 | 4.073277 | hypothetical protein | |
| SB48_HM08orf01820 | 2 | 23 | 4.144044 | 3-hydroxyacyl-CoA dehydrogenase NAD-binding | |
| SB48_HM08orf01822 | 2 | 22 | 4.082671 | acetyl-CoA acetyltransferase | |
| SB48_HM08orf01824 | 4 | 23 | 2.548247 | hypothetical protein | |
| SB48_HM08orf01826 | 4 | 24 | 2.843244 | acyl-CoA dehydrogenase | |
| SB48_HM08orf01828 | 0 | 20 | 2.104227 | ArsC family protein | |
| SB48_HM08orf01829 | 1 | 20 | 1.789633 | glycine cleavage system protein H | |
| SB48_HM08orf01830 | 1 | 18 | 1.799870 | thioredoxin | |
| SB48_HM08orf01833 | 2 | 19 | 2.545391 | hypothetical protein | |
| SB48_HM08orf01835 | 0 | 16 | 2.180135 | hypothetical protein | |
| SB48_HM08orf01837 | 2 | 18 | 1.312758 | hypothetical protein | |
| SB48_HM08orf01838 | 2 | 19 | 1.580275 | iron ABC transporter ATP-binding protein |
| 19 | SB48_HM08orf01914 | SB48_HM08orf01923 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01914 | -1 | 19 | -4.025560 | MFS transporter | |
| SB48_HM08orf01916 | 5 | 27 | -6.461618 | hypothetical protein | |
| SB48_HM08orf01917 | 4 | 23 | -5.573728 | hypothetical protein | |
| SB48_HM08orf01919 | 4 | 24 | -6.097962 | hypothetical protein | |
| SB48_HM08orf01920 | 3 | 23 | -3.348147 | transposase IS4 family protein | |
| SB48_HM08orf01921 | 6 | 24 | -0.700548 | hypothetical protein | |
| SB48_HM08orf01922 | 3 | 20 | -0.109924 | hypothetical protein | |
| SB48_HM08orf01923 | 2 | 19 | 1.102062 | kinase associated protein B |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01914 | TCRTETA | 101 | 6e-26 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01922 | FLGFLIH | 32 | 1e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 20 | SB48_HM08orf01942 | SB48_HM08orf01994 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01942 | 0 | 23 | -3.298957 | helix-turn-helix domain-containing protein | |
| SB48_HM08orf01943 | -1 | 22 | -2.778614 | RNA binding S1 domain-containing protein | |
| SB48_HM08orf01944 | -2 | 20 | -1.694333 | hypothetical protein | |
| SB48_HM08orf01945 | -3 | 15 | -1.024485 | hypothetical protein | |
| SB48_HM08orf01947 | -2 | 15 | -0.414558 | hypothetical protein | |
| SB48_HM08orf01948 | -3 | 16 | 0.249740 | transcriptional regulator | |
| SB48_HM08orf01952 | -2 | 15 | 1.176949 | hypothetical protein | |
| SB48_HM08orf01953 | -2 | 14 | 2.542362 | phosphoglucose isomerase (PGI) | |
| SB48_HM08orf01955 | -1 | 14 | 3.989512 | Ion transport 2 domain-containing protein | |
| SB48_HM08orf01958 | -2 | 14 | 4.410906 | **hypothetical protein | |
| SB48_HM08orf01956 | -2 | 14 | 4.292749 | hypothetical protein | |
| SB48_HM08orf01959 | -3 | 13 | 4.041848 | ornithine cyclodeaminase/mu-crystallin | |
| SB48_HM08orf01963 | -3 | 13 | 4.095800 | aldehyde dehydrogenase | |
| SB48_HM08orf01965 | -2 | 15 | 3.002163 | FAD-dependent oxidoreductase | |
| SB48_HM08orf01967 | -2 | 14 | 2.746370 | transposase IS116/IS110/IS902 family protein | |
| SB48_HM08orf01972 | -2 | 13 | 2.150225 | membrane protein | |
| SB48_HM08orf01973 | -1 | 13 | 2.256898 | hypothetical protein | |
| SB48_HM08orf01975 | 0 | 12 | 2.264186 | 3-ketoacyl-ACP reductase | |
| SB48_HM08orf01977 | -3 | 10 | -0.778612 | hypothetical protein | |
| SB48_HM08orf01979 | -4 | 9 | 0.035040 | glycosyl transferase family 2 | |
| SB48_HM08orf01981 | -3 | 10 | -1.633211 | hypothetical protein | |
| SB48_HM08orf01983 | -3 | 13 | -3.225602 | hypothetical protein | |
| SB48_HM08orf01985 | -2 | 13 | -3.748810 | chemotaxis protein | |
| SB48_HM08orf01986 | 1 | 20 | -5.825918 | GntR family transcriptional regulator | |
| SB48_HM08orf01988 | 0 | 17 | -4.295855 | ATPase | |
| SB48_HM08orf01992 | 1 | 19 | -5.464272 | ABC transporter permease | |
| SB48_HM08orf01993 | 1 | 17 | -5.423053 | ABC transporter-like protein | |
| SB48_HM08orf01994 | 0 | 18 | -4.302039 | sugar ABC transporter ATP-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01975 | DHBDHDRGNASE | 142 | 2e-43 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01985 | GPOSANCHOR | 34 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 21 | SB48_HM08orf02016 | SB48_HM08orf02115 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02016 | 2 | 23 | -2.720445 | transposase IS4 family protein | |
| SB48_HM08orf02018 | 2 | 23 | -1.454552 | chloride channel protein | |
| SB48_HM08orf02019 | 5 | 30 | -6.003203 | hypothetical protein | |
| SB48_HM08orf02020 | 1 | 23 | -4.638705 | hypothetical protein | |
| SB48_HM08orf02021 | -1 | 16 | -5.156947 | hypothetical protein | |
| SB48_HM08orf02022 | 1 | 16 | -4.226988 | hypothetical protein | |
| SB48_HM08orf02025 | 1 | 18 | -3.993897 | *hypothetical protein | |
| SB48_HM08orf02027 | 1 | 17 | -4.041920 | hypothetical protein | |
| SB48_HM08orf02030 | 2 | 18 | -4.542603 | polysaccharide deacetylase | |
| SB48_HM08orf02033 | 1 | 15 | -2.373547 | hypothetical protein | |
| SB48_HM08orf02035 | 2 | 18 | -0.839603 | hypothetical protein | |
| SB48_HM08orf02038 | 0 | 14 | 0.846564 | hypothetical protein | |
| SB48_HM08orf02039 | -1 | 15 | 0.419628 | hypothetical protein | |
| SB48_HM08orf02040 | -1 | 14 | -0.504875 | *hypothetical protein | |
| SB48_HM08orf02042 | -2 | 18 | -4.306609 | sodium:solute symporter | |
| SB48_HM08orf02043 | 0 | 22 | -5.914734 | hypothetical protein | |
| SB48_HM08orf02044 | 0 | 23 | -5.978571 | amidohydrolase | |
| SB48_HM08orf02047 | 3 | 28 | -9.223457 | hypothetical protein | |
| SB48_HM08orf02048 | -2 | 16 | -3.815061 | AsnC family transcriptional regulator | |
| SB48_HM08orf02049 | -2 | 15 | -3.266366 | transposase | |
| SB48_HM08orf02051 | -2 | 13 | 1.268009 | hypothetical protein | |
| SB48_HM08orf02052 | -1 | 13 | 1.164367 | copper ion binding protein | |
| SB48_HM08orf02053 | 0 | 13 | 0.644886 | hypothetical protein | |
| SB48_HM08orf02055 | 1 | 14 | 0.508288 | copper-translocating P-type ATPase | |
| SB48_HM08orf02057 | 4 | 24 | -1.905426 | hypothetical protein | |
| SB48_HM08orf02058 | 3 | 19 | -1.321286 | hypothetical protein | |
| SB48_HM08orf02060 | 1 | 16 | -0.742563 | hypothetical protein | |
| SB48_HM08orf02061 | 0 | 13 | -0.255462 | hypothetical protein | |
| SB48_HM08orf02062 | -1 | 11 | 1.498877 | hypothetical protein | |
| SB48_HM08orf02063 | 0 | 12 | 2.563831 | hypothetical protein | |
| SB48_HM08orf02066 | 0 | 13 | 2.951630 | MgtC/SapB transporter | |
| SB48_HM08orf02068 | 1 | 14 | 3.468096 | membrane protein | |
| SB48_HM08orf02072 | 1 | 14 | 3.758401 | ********************1,4-dihydroxy-2-naphthoate | |
| SB48_HM08orf02074 | 1 | 17 | 4.946527 | isochorismate synthase | |
| SB48_HM08orf02076 | 1 | 18 | 5.346768 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- | |
| SB48_HM08orf02078 | 0 | 18 | 5.273514 | alpha/beta hydrolase | |
| SB48_HM08orf02079 | 0 | 18 | 3.688448 | naphthoate synthase | |
| SB48_HM08orf02082 | 0 | 17 | 3.297237 | hypothetical protein | |
| SB48_HM08orf02083 | 0 | 17 | 3.745466 | O-succinylbenzoate-CoA ligase | |
| SB48_HM08orf02084 | -2 | 17 | 1.392946 | o-succinylbenzoic acid (OSB) synthetase | |
| SB48_HM08orf02087 | -1 | 15 | -1.731142 | hypothetical protein | |
| SB48_HM08orf02088 | 0 | 16 | -0.650556 | adhesin | |
| SB48_HM08orf02089 | -1 | 17 | 1.451776 | hypothetical protein | |
| SB48_HM08orf02093 | -1 | 18 | 1.989410 | hypothetical protein | |
| SB48_HM08orf02095 | -1 | 16 | 1.624679 | ferritin Dps family protein | |
| SB48_HM08orf02097 | -1 | 18 | 2.068780 | hypothetical protein | |
| SB48_HM08orf02099 | 0 | 19 | 3.543301 | 7,8-dihydro-8-oxoguanine-triphosphatase | |
| SB48_HM08orf02101 | 0 | 19 | 2.995998 | sulfonate ABC transporter permease | |
| SB48_HM08orf02102 | -1 | 19 | 2.504250 | ABC transporter-like protein | |
| SB48_HM08orf02103 | 1 | 16 | 3.361077 | ABC transporter substrate-binding protein | |
| SB48_HM08orf02104 | 2 | 16 | 4.038333 | hypothetical protein | |
| SB48_HM08orf02106 | 1 | 16 | 4.524339 | gluconokinase | |
| SB48_HM08orf02107 | 0 | 13 | 3.640294 | hypothetical protein | |
| SB48_HM08orf02110 | -1 | 14 | 4.272408 | NADPH-dependent FMN reductase | |
| SB48_HM08orf02111 | 1 | 17 | 5.541863 | acyl-CoA thioester hydrolase | |
| SB48_HM08orf02112 | -1 | 15 | 3.395075 | hypothetical protein | |
| SB48_HM08orf02114 | -1 | 16 | 3.328940 | MutT/NUDIX family protein | |
| SB48_HM08orf02115 | 0 | 16 | 3.055771 | phosphoenolpyruvate carboxykinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02052 | ACRIFLAVINRP | 27 | 0.003 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02068 | ACRIFLAVINRP | 29 | 0.021 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02076 | PF03944 | 32 | 0.005 | delta endotoxin | |
>PF03944#delta endotoxin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02088 | ADHESNFAMILY | 188 | 3e-60 | Adhesin family signature. | |
>ADHESNFAMILY#Adhesin family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02095 | HELNAPAPROT | 163 | 1e-54 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02102 | PF05272 | 29 | 0.018 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 22 | SB48_HM08orf02225 | SB48_HM08orf02274 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02225 | 0 | 16 | 3.026843 | global transcriptional regulator, catabolite | |
| SB48_HM08orf02228 | -2 | 15 | 2.975764 | histone deacetylase superfamily | |
| SB48_HM08orf02230 | -2 | 15 | 2.762042 | acetoin utilization protein AcuB | |
| SB48_HM08orf02231 | -3 | 11 | 2.116862 | acetoin dehydrogenase | |
| SB48_HM08orf02232 | -2 | 13 | 1.813499 | hypothetical protein | |
| SB48_HM08orf02233 | -2 | 14 | 2.638852 | acetyl-CoA synthetase | |
| SB48_HM08orf02235 | -2 | 16 | 1.981411 | molybdenum ABC transporter substrate-binding | |
| SB48_HM08orf02236 | -1 | 17 | 3.439813 | molybdate ABC transporter permease | |
| SB48_HM08orf02237 | -1 | 18 | 3.671388 | ABC transporter-like protein | |
| SB48_HM08orf02238 | -1 | 20 | 4.866140 | hypothetical protein | |
| SB48_HM08orf02239 | 0 | 21 | 5.004284 | molybdenum cofactor biosynthesis protein A | |
| SB48_HM08orf02240 | 0 | 20 | 5.510254 | molybdenum cofactor synthesis domain-containing | |
| SB48_HM08orf02242 | 1 | 19 | 5.773899 | Molybdopterin-guanine dinucleotide biosynthesis | |
| SB48_HM08orf02244 | 0 | 17 | 5.193443 | molybdenum cofactor synthesis domain-containing | |
| SB48_HM08orf02246 | 0 | 20 | 4.522816 | molybdopterin-guanine dinucleotide biosynthesis | |
| SB48_HM08orf02248 | 1 | 21 | 4.117963 | molybdenum cofactor biosynthesis protein MoaE | |
| SB48_HM08orf02250 | 0 | 19 | 3.564124 | molybdopterin converting factor subunit 1 | |
| SB48_HM08orf02251 | 0 | 18 | 3.566184 | molybdenum cofactor biosynthesis protein C | |
| SB48_HM08orf02252 | -1 | 17 | 3.576685 | UBA/THIF-type NAD/FAD binding protein | |
| SB48_HM08orf02255 | -1 | 18 | 3.167687 | hypothetical protein | |
| SB48_HM08orf02257 | -2 | 17 | 3.172090 | formate dehydrogenase subunit alpha | |
| SB48_HM08orf02258 | -2 | 13 | 1.309638 | hypothetical protein | |
| SB48_HM08orf02259 | -3 | 13 | 1.376433 | formate dehydrogenase family accessory protein | |
| SB48_HM08orf02261 | 0 | 14 | 1.493159 | hypothetical protein | |
| SB48_HM08orf02263 | -1 | 13 | 1.065406 | hypothetical protein | |
| SB48_HM08orf02264 | -2 | 12 | 0.315897 | tyrosyl-tRNA synthetase | |
| SB48_HM08orf02266 | -2 | 12 | -0.048658 | Fis family PAS modulated sigma-54 specific | |
| SB48_HM08orf02265 | -2 | 13 | -1.105215 | hypothetical protein | |
| SB48_HM08orf02269 | -1 | 12 | -3.566358 | 1-pyrroline-5-carboxylate dehydrogenase | |
| SB48_HM08orf02270 | -1 | 10 | -4.724266 | proline dehydrogenase | |
| SB48_HM08orf02271 | 0 | 11 | -4.896720 | hypothetical protein | |
| SB48_HM08orf02272 | -2 | 10 | -4.014796 | 30S ribosomal protein S4 | |
| SB48_HM08orf02274 | -1 | 12 | -3.350475 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02266 | HTHFIS | 400 | e-138 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 23 | SB48_HM08orf02293 | SB48_HM08orf02326 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02293 | 0 | 18 | 3.064679 | sporulation protein YtfJ | |
| SB48_HM08orf02296 | -2 | 19 | 2.852052 | Redoxin domain-containing protein | |
| SB48_HM08orf02297 | 1 | 21 | 3.448160 | hypothetical protein | |
| SB48_HM08orf02299 | 1 | 20 | 3.426125 | N-6 DNA methylase | |
| SB48_HM08orf02301 | 4 | 20 | 3.029811 | hypothetical protein | |
| SB48_HM08orf02302 | 1 | 17 | 3.427561 | acetate kinase | |
| SB48_HM08orf02303 | 0 | 12 | 3.410240 | hypothetical protein | |
| SB48_HM08orf02306 | 0 | 14 | 3.041627 | protein EcsC | |
| SB48_HM08orf02307 | 0 | 15 | 2.255214 | UspA domain-containing protein | |
| SB48_HM08orf02309 | 0 | 15 | 2.056528 | hypothetical protein | |
| SB48_HM08orf02311 | 0 | 17 | 2.828401 | alanine dehydrogenase | |
| SB48_HM08orf02313 | -1 | 19 | 1.950843 | peptidase M24 | |
| SB48_HM08orf02314 | 0 | 20 | 1.333863 | beta-lactamase domain-containing protein | |
| SB48_HM08orf02318 | -1 | 19 | 2.873108 | hypothetical protein | |
| SB48_HM08orf02320 | 0 | 18 | 3.512307 | membrane protein | |
| SB48_HM08orf02321 | -1 | 18 | 3.663111 | oligoribonuclease | |
| SB48_HM08orf02322 | 0 | 17 | 3.635597 | sporulation protein | |
| SB48_HM08orf02324 | 1 | 16 | 3.976929 | hypothetical protein | |
| SB48_HM08orf02325 | 0 | 15 | 3.993554 | DNA polymerase III subunit epsilon | |
| SB48_HM08orf02326 | 0 | 17 | 3.333496 | malic protein NAD-binding protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02302 | ACETATEKNASE | 573 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02322 | BINARYTOXINA | 28 | 0.017 | Clostridial binary toxin A signature. | |
>BINARYTOXINA#Clostridial binary toxin A signature. | |||||
| 24 | SB48_HM08orf02389 | SB48_HM08orf02403 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02389 | 0 | 24 | -3.049719 | hypothetical protein | |
| SB48_HM08orf02391 | 0 | 18 | -3.403493 | hypothetical protein | |
| SB48_HM08orf02392 | 0 | 17 | -2.659738 | PadR-like family transcriptional regulator | |
| SB48_HM08orf02393 | 2 | 19 | -3.831179 | hypothetical protein | |
| SB48_HM08orf02394 | 3 | 21 | -3.874444 | antibiotic biosynthesis monooxygenase | |
| SB48_HM08orf02395 | 3 | 21 | -3.782697 | hypothetical protein | |
| SB48_HM08orf02396 | 2 | 19 | -3.199101 | hypothetical protein | |
| SB48_HM08orf02397 | 3 | 22 | -2.895506 | transposase IS116/IS110/IS902 family protein | |
| SB48_HM08orf02398 | 2 | 20 | -2.941922 | transposase IS4 family protein | |
| SB48_HM08orf02399 | 0 | 17 | 1.032159 | hypothetical protein | |
| SB48_HM08orf02402 | 1 | 17 | 3.160526 | small, acid-soluble spore protein I | |
| SB48_HM08orf02403 | 1 | 15 | 3.010034 | tRNA/rRNA methyltransferase SpoU |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02402 | DNABINDINGHU | 24 | 0.036 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 25 | SB48_HM08orf02474 | SB48_HM08orf02518 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02474 | 2 | 24 | -0.221289 | nucleoside-triphosphatase rdgB | |
| SB48_HM08orf02476 | 0 | 25 | -3.334453 | phosphodiesterase | |
| SB48_HM08orf02478 | 3 | 27 | -4.943979 | hypothetical protein | |
| SB48_HM08orf02479 | 2 | 24 | -4.952199 | *hypothetical protein | |
| SB48_HM08orf02480 | 7 | 30 | -4.816458 | hypothetical protein | |
| SB48_HM08orf02482 | 3 | 22 | -2.771460 | hypothetical protein | |
| SB48_HM08orf02483 | 2 | 19 | -2.391986 | hypothetical protein | |
| SB48_HM08orf02484 | 2 | 21 | -1.977153 | hypothetical protein | |
| SB48_HM08orf02487 | 1 | 17 | -1.918139 | hypothetical protein | |
| SB48_HM08orf02488 | -1 | 15 | -0.512593 | RNA-directed DNA polymerase | |
| SB48_HM08orf02490 | 1 | 15 | 1.833990 | hydrolase | |
| SB48_HM08orf02492 | 1 | 15 | 1.418759 | trigger factor | |
| SB48_HM08orf02493 | 1 | 15 | 2.163778 | hypothetical protein | |
| SB48_HM08orf02494 | 1 | 16 | 2.593721 | ATP-dependent Clp protease, ATP-binding subunit | |
| SB48_HM08orf02497 | -1 | 15 | 2.898012 | anti-sigma H sporulation factor LonB | |
| SB48_HM08orf02498 | 0 | 17 | 3.241738 | anti-sigma H sporulation factor LonB | |
| SB48_HM08orf02500 | -2 | 16 | 3.034431 | ribosome biogenesis GTP-binding protein YsxC | |
| SB48_HM08orf02503 | -1 | 16 | 3.619872 | hypothetical protein | |
| SB48_HM08orf02505 | -2 | 16 | 3.379888 | glutamyl-tRNA reductase | |
| SB48_HM08orf02507 | -2 | 14 | 3.918870 | cytochrome c assembly protein | |
| SB48_HM08orf02508 | -1 | 15 | 4.473614 | porphobilinogen deaminase | |
| SB48_HM08orf02510 | -1 | 13 | 3.369441 | uroporphyrinogen III synthase HEM4 | |
| SB48_HM08orf02511 | 0 | 13 | 2.817833 | hypothetical protein | |
| SB48_HM08orf02512 | 0 | 12 | 2.559628 | delta-aminolevulinic acid dehydratase | |
| SB48_HM08orf02514 | 0 | 14 | 2.280365 | glutamate-1-semialdehyde-2,1-aminomutase | |
| SB48_HM08orf02515 | 1 | 20 | 1.248627 | hypothetical protein | |
| SB48_HM08orf02518 | 2 | 18 | 2.743190 | stage VI sporulation protein D |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02494 | HTHFIS | 32 | 0.006 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02497 | HTHFIS | 57 | 1e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02498 | HTHFIS | 40 | 3e-05 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02518 | IGASERPTASE | 33 | 0.004 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 26 | SB48_HM08orf02547 | SB48_HM08orf02602 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02547 | 1 | 15 | 4.144301 | hypothetical protein | |
| SB48_HM08orf02551 | 2 | 16 | 4.009446 | fimbrial assembly family protein | |
| SB48_HM08orf02552 | -1 | 16 | 3.995778 | hypothetical protein | |
| SB48_HM08orf02553 | -1 | 15 | 2.526321 | peptidase A24A domain-containing protein | |
| SB48_HM08orf02557 | -2 | 14 | 1.202283 | hypothetical protein | |
| SB48_HM08orf02559 | -1 | 18 | 0.343290 | hypothetical protein | |
| SB48_HM08orf02560 | -2 | 16 | 0.550148 | hypothetical protein | |
| SB48_HM08orf02561 | 0 | 14 | 1.362499 | rod shape-determining protein MreB | |
| SB48_HM08orf02562 | 0 | 14 | 0.380730 | rod shape-determining protein MreC | |
| SB48_HM08orf02563 | 2 | 15 | 1.218646 | rod shape-determining protein MreD | |
| SB48_HM08orf02566 | 2 | 18 | 3.284390 | hypothetical protein | |
| SB48_HM08orf02568 | 1 | 17 | 2.708336 | septation inhibitor protein | |
| SB48_HM08orf02569 | 2 | 19 | 2.976728 | septum site-determining protein MinD | |
| SB48_HM08orf02571 | 3 | 20 | 3.052269 | peptidase M23 | |
| SB48_HM08orf02573 | 2 | 19 | 3.182882 | peptidase M50 | |
| SB48_HM08orf02575 | 3 | 21 | 4.895532 | ribonuclease E | |
| SB48_HM08orf02578 | 3 | 19 | 3.392088 | 50S ribosomal protein L21 | |
| SB48_HM08orf02580 | 2 | 19 | 4.186474 | hypothetical protein | |
| SB48_HM08orf02581 | 1 | 17 | 4.339042 | 50S ribosomal protein L27 | |
| SB48_HM08orf02582 | 0 | 15 | 5.121673 | sporulation initiation phosphotransferase B | |
| SB48_HM08orf02583 | 0 | 14 | 5.176835 | GTPase CgtA | |
| SB48_HM08orf02585 | -1 | 12 | 4.054778 | hypothetical protein | |
| SB48_HM08orf02586 | -1 | 13 | 4.816760 | prephenate dehydratase | |
| SB48_HM08orf02587 | -1 | 13 | 5.068817 | transcriptional regulator | |
| SB48_HM08orf02589 | 1 | 14 | 4.919393 | spore coat assembly protein SafA | |
| SB48_HM08orf02592 | 3 | 18 | 4.879586 | aminoglycoside phosphotransferase | |
| SB48_HM08orf02594 | 2 | 18 | 4.662853 | hypothetical protein | |
| SB48_HM08orf02596 | 1 | 19 | 4.395477 | hypothetical protein | |
| SB48_HM08orf02597 | 1 | 17 | 4.628315 | hypothetical protein | |
| SB48_HM08orf02601 | 0 | 19 | 4.270057 | Holliday junction ATP-dependent DNA helicase | |
| SB48_HM08orf02602 | -1 | 18 | 4.196892 | Holliday junction DNA helicase RuvB |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02551 | cloacin | 30 | 0.014 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02553 | PREPILNPTASE | 190 | 4e-62 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02561 | SHAPEPROTEIN | 484 | e-175 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02585 | HTHTETR | 32 | 7e-04 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| 27 | SB48_HM08orf02630 | SB48_HM08orf02658 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02630 | -1 | 14 | 3.407392 | secretion protein HlyD family protein | |
| SB48_HM08orf02632 | 0 | 15 | 3.904763 | EmrB/QacA subfamily drug resistance transporter | |
| SB48_HM08orf02633 | 1 | 16 | 4.315688 | cell wall hydrolase/autolysin | |
| SB48_HM08orf02635 | 0 | 16 | 3.835973 | hypothetical protein | |
| SB48_HM08orf02636 | 0 | 15 | 3.642091 | hypothetical protein | |
| SB48_HM08orf02640 | 1 | 17 | 4.127481 | histidyl-tRNA synthetase | |
| SB48_HM08orf02642 | 1 | 17 | 3.683418 | aspartyl-tRNA synthetase | |
| SB48_HM08orf02643 | 0 | 14 | 3.237008 | hypothetical protein | |
| SB48_HM08orf02644 | -1 | 14 | 2.758081 | bile acid:sodium symporter | |
| SB48_HM08orf02647 | -3 | 11 | 0.501598 | UBA/THIF-type NAD/FAD binding protein | |
| SB48_HM08orf02651 | -3 | 13 | 1.010688 | ATPase AAA | |
| SB48_HM08orf02653 | -3 | 14 | 0.561626 | hypothetical protein | |
| SB48_HM08orf02654 | -2 | 12 | 1.538774 | short-chain dehydrogenase/reductase SDR | |
| SB48_HM08orf02655 | -3 | 12 | 1.354921 | hypothetical protein | |
| SB48_HM08orf02657 | -4 | 14 | 1.347214 | hypothetical protein | |
| SB48_HM08orf02658 | -3 | 18 | 3.141015 | BadM/Rrf2 family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02630 | RTXTOXIND | 80 | 1e-19 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02632 | TCRTETB | 158 | 2e-44 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02651 | PF05272 | 36 | 3e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02654 | DHBDHDRGNASE | 142 | 9e-44 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 28 | SB48_HM08orf02817 | SB48_HM08orf02836 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02817 | 1 | 16 | 3.865261 | hypothetical protein | |
| SB48_HM08orf02819 | 1 | 13 | 5.054540 | cytochrome C | |
| SB48_HM08orf02820 | 2 | 13 | 5.002663 | SAM-dependent methyltransferase | |
| SB48_HM08orf02821 | 2 | 14 | 3.995072 | NGG1p interacting factor 3 protein, NIF3 | |
| SB48_HM08orf02825 | 3 | 15 | 3.185627 | hydroxymethylbutenyl pyrophosphate reductase | |
| SB48_HM08orf02826 | 3 | 15 | 2.877413 | hypothetical protein | |
| SB48_HM08orf02827 | 3 | 15 | 2.440217 | hypothetical protein | |
| SB48_HM08orf02828 | 2 | 16 | 1.476800 | hypothetical protein | |
| SB48_HM08orf02831 | 1 | 17 | 2.280116 | DEAD/DEAH box helicase domain-containing | |
| SB48_HM08orf02834 | 1 | 18 | 2.114644 | apurinic endonuclease Apn1 | |
| SB48_HM08orf02836 | 2 | 16 | 1.733981 | hydrolase Nlp/P60 |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02836 | GPOSANCHOR | 46 | 3e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| 29 | SB48_HM08orf02888 | SB48_HM08orf03029 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02888 | -1 | 21 | 4.320387 | hypothetical protein | |
| SB48_HM08orf02890 | -1 | 19 | 4.195901 | hypothetical protein | |
| SB48_HM08orf02889 | -1 | 19 | 4.048888 | hypothetical protein | |
| SB48_HM08orf02891 | -1 | 18 | 4.754953 | glycine cleavage system T protein | |
| SB48_HM08orf02892 | -1 | 20 | 4.172712 | glycine dehydrogenase subunit 1 | |
| SB48_HM08orf02893 | 0 | 20 | 3.506837 | glycine dehydrogenase subunit 2 | |
| SB48_HM08orf02894 | 0 | 22 | 1.637456 | Rhodanese-like protein | |
| SB48_HM08orf02895 | 0 | 20 | 1.985379 | hypothetical protein | |
| SB48_HM08orf02896 | -1 | 21 | 2.183966 | octanoyltransferase | |
| SB48_HM08orf02897 | -1 | 17 | 1.941953 | hypothetical protein | |
| SB48_HM08orf02899 | -2 | 15 | 2.043229 | ribonucleotide-diphosphate reductase | |
| SB48_HM08orf02902 | 0 | 14 | 2.832121 | hypothetical protein | |
| SB48_HM08orf02903 | -1 | 14 | 2.493250 | ferredoxin--NADP reductase | |
| SB48_HM08orf02905 | -1 | 13 | 3.011600 | hypothetical protein | |
| SB48_HM08orf02908 | -1 | 12 | 3.310126 | betaine-aldehyde dehydrogenase | |
| SB48_HM08orf02909 | -1 | 14 | 2.464602 | 3-hydroxybutyryl-CoA dehydrogenase | |
| SB48_HM08orf02910 | 0 | 13 | 2.672184 | acetyl-CoA acetyltransferase | |
| SB48_HM08orf02911 | -1 | 13 | 1.171240 | PaaX family transcrtiptional regulator | |
| SB48_HM08orf02913 | 0 | 14 | 2.650449 | 2-nitropropane dioxygenase | |
| SB48_HM08orf02914 | -1 | 13 | 1.890302 | hypothetical protein | |
| SB48_HM08orf02915 | -2 | 14 | 1.624350 | hypothetical protein | |
| SB48_HM08orf02917 | 0 | 15 | 3.042187 | membrane protein | |
| SB48_HM08orf02919 | -1 | 15 | 3.262797 | membrane protein | |
| SB48_HM08orf02923 | 0 | 16 | 3.588450 | 3-dehydroquinate dehydratase | |
| SB48_HM08orf02924 | 0 | 17 | 2.750214 | peptidase M24 | |
| SB48_HM08orf02925 | 0 | 20 | 3.328392 | elongation factor P | |
| SB48_HM08orf02927 | 0 | 21 | 2.213286 | stage III sporulation protein AA | |
| SB48_HM08orf02928 | -1 | 18 | 0.830430 | stage III sporulation protein AB | |
| SB48_HM08orf02929 | 0 | 18 | 0.061924 | stage III sporulation protein AC | |
| SB48_HM08orf02931 | 0 | 16 | -0.029964 | stage III sporulation protein AD | |
| SB48_HM08orf02933 | 0 | 15 | -0.029491 | stage III sporulation protein AE | |
| SB48_HM08orf02934 | 2 | 12 | -1.211262 | stage III sporulation protein AF | |
| SB48_HM08orf02936 | 1 | 14 | 1.312657 | stage III sporulation protein AG | |
| SB48_HM08orf02938 | 0 | 16 | 1.643490 | hypothetical protein | |
| SB48_HM08orf02940 | 2 | 17 | 1.845167 | hypothetical protein | |
| SB48_HM08orf02939 | 1 | 16 | 2.720042 | hypothetical protein | |
| SB48_HM08orf02941 | 0 | 16 | 3.023116 | acetyl-CoA carboxylase, biotin carboxyl carrier | |
| SB48_HM08orf02942 | -1 | 14 | 2.953122 | acetyl-CoA carboxylase, biotin carboxylase | |
| SB48_HM08orf02943 | -1 | 16 | 2.201584 | hypothetical protein | |
| SB48_HM08orf02944 | -1 | 16 | 3.234881 | NusB antitermination factor | |
| SB48_HM08orf02945 | -1 | 15 | 3.929016 | Tetrahydrofolate dehydrogenase/cyclohydrolase, | |
| SB48_HM08orf02946 | -1 | 15 | 3.848437 | hypothetical protein | |
| SB48_HM08orf02948 | -2 | 15 | 3.482012 | exodeoxyribonuclease VII large subunit | |
| SB48_HM08orf02949 | 0 | 15 | 3.006141 | exodeoxyribonuclease VII small subunit | |
| SB48_HM08orf02951 | 0 | 14 | 2.673776 | polyprenyl synthetase | |
| SB48_HM08orf02952 | -1 | 14 | 1.863413 | 1-deoxy-D-xylulose-5-phosphate synthase | |
| SB48_HM08orf02954 | -1 | 14 | 1.088156 | hemolysin A | |
| SB48_HM08orf02956 | -1 | 13 | 1.078496 | arginine repressor ArgR | |
| SB48_HM08orf02957 | 0 | 14 | 1.918458 | DNA repair protein RecN | |
| SB48_HM08orf02958 | 0 | 15 | 1.957522 | stage IV sporulation protein B | |
| SB48_HM08orf02960 | -1 | 13 | 1.943603 | sporulation transcriptional activator Spo0A | |
| SB48_HM08orf02962 | 0 | 14 | 3.064679 | glycerophosphoryl diester phosphodiesterase | |
| SB48_HM08orf02965 | 1 | 14 | 3.954501 | hypothetical protein | |
| SB48_HM08orf02969 | 1 | 15 | 4.178110 | sigma54 specific transcriptional regulator | |
| SB48_HM08orf02971 | 1 | 17 | 4.523881 | Fis family transcriptional regulator | |
| SB48_HM08orf02972 | 0 | 17 | 5.053363 | hypothetical protein | |
| SB48_HM08orf02973 | 0 | 17 | 5.282935 | leucine dehydrogenase | |
| SB48_HM08orf02974 | 1 | 18 | 4.813054 | dihydrolipoamide dehydrogenase | |
| SB48_HM08orf02975 | 1 | 18 | 4.026648 | dehydrogenase E1 component | |
| SB48_HM08orf02977 | 0 | 18 | 3.804853 | transketolase central region | |
| SB48_HM08orf02979 | 0 | 18 | 3.937279 | hypothetical protein | |
| SB48_HM08orf02981 | 1 | 21 | 3.491248 | hypothetical protein | |
| SB48_HM08orf02983 | 0 | 21 | 3.489919 | 1-phosphofructokinase | |
| SB48_HM08orf02985 | 2 | 16 | 4.331143 | hypothetical protein | |
| SB48_HM08orf02986 | 0 | 17 | 4.282335 | hypothetical protein | |
| SB48_HM08orf02989 | 1 | 18 | 4.389644 | ErfK/YbiS/YcfS/YnhG family protein | |
| SB48_HM08orf02993 | 1 | 18 | 4.549828 | peptidase T-like protein | |
| SB48_HM08orf02994 | 0 | 18 | 4.642588 | hypothetical protein | |
| SB48_HM08orf02996 | 1 | 18 | 4.885941 | UMUC domain-containing protein DNA-repair | |
| SB48_HM08orf02999 | 0 | 21 | 4.665693 | glucose-6-phosphate 1-dehydrogenase | |
| SB48_HM08orf03002 | 2 | 21 | 7.025925 | ribonuclease Z | |
| SB48_HM08orf03004 | 1 | 23 | 7.163508 | pyrroline-5-carboxylate reductase | |
| SB48_HM08orf03005 | 1 | 25 | 6.734568 | hypothetical protein | |
| SB48_HM08orf03007 | 0 | 24 | 8.194772 | hypothetical protein | |
| SB48_HM08orf03009 | 1 | 24 | 7.894108 | oxidoreductase | |
| SB48_HM08orf03011 | 0 | 25 | 8.949870 | UMUC domain-containing protein DNA-repair | |
| SB48_HM08orf03013 | 1 | 27 | 6.694201 | hypothetical protein | |
| SB48_HM08orf03015 | 1 | 26 | 5.277868 | hypothetical protein | |
| SB48_HM08orf03017 | 1 | 25 | 5.042457 | glycoside hydrolase family protein | |
| SB48_HM08orf03019 | 5 | 23 | 1.890132 | hypothetical protein | |
| SB48_HM08orf03020 | 5 | 21 | 1.722997 | hypothetical protein | |
| SB48_HM08orf03023 | 5 | 21 | 1.018416 | toxic anion resistance family protein | |
| SB48_HM08orf03025 | 2 | 17 | 0.408708 | 5-bromo-4-chloroindolyl phosphate hydrolysis | |
| SB48_HM08orf03029 | 0 | 16 | 3.364979 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02941 | RTXTOXIND | 31 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02956 | ARGREPRESSOR | 206 | 1e-71 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02960 | HTHFIS | 85 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02969 | HTHFIS | 274 | 7e-88 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02971 | HTHFIS | 68 | 6e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03009 | DHBDHDRGNASE | 90 | 2e-23 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 30 | SB48_HM08orf03128 | SB48_HM08orf03162 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03128 | -1 | 13 | 3.267931 | cytidylate kinase | |
| SB48_HM08orf03131 | -2 | 15 | 3.167068 | RNA binding S1 domain-containing protein | |
| SB48_HM08orf03133 | -2 | 17 | 3.265785 | hypothetical protein | |
| SB48_HM08orf03134 | -2 | 16 | 2.360808 | membrane protein | |
| SB48_HM08orf03137 | -1 | 18 | 2.612004 | ribosome-associated GTPase EngA | |
| SB48_HM08orf03139 | -2 | 18 | 2.253585 | glycerol-3-phosphate dehydrogenase (NAD(P)+) | |
| SB48_HM08orf03140 | -1 | 17 | 2.030430 | protein YphE | |
| SB48_HM08orf03142 | -2 | 17 | 2.031346 | hypothetical protein | |
| SB48_HM08orf03143 | -2 | 17 | 2.029080 | hypothetical protein | |
| SB48_HM08orf03144 | -2 | 18 | 3.555677 | stage IV sporulation protein A | |
| SB48_HM08orf03146 | 1 | 17 | 2.650402 | histone family protein DNA-binding protein | |
| SB48_HM08orf03147 | 0 | 17 | 3.004293 | hypothetical protein | |
| SB48_HM08orf03149 | -1 | 14 | 1.119599 | transcription attenuation protein MtrB | |
| SB48_HM08orf03150 | -1 | 13 | 3.023628 | heptaprenyl diphosphate synthase subunit I | |
| SB48_HM08orf03152 | -1 | 12 | 3.404815 | ubiquinone/menaquinone biosynthesis | |
| SB48_HM08orf03154 | 0 | 13 | 2.842457 | heptaprenyl diphosphate synthase component II | |
| SB48_HM08orf03156 | 0 | 14 | 3.711629 | nucleoside diphosphate kinase | |
| SB48_HM08orf03157 | 0 | 15 | 3.363430 | chemotaxis protein CheR | |
| SB48_HM08orf03158 | 0 | 15 | 5.573818 | chorismate synthase | |
| SB48_HM08orf03160 | 0 | 15 | 4.289008 | 3-dehydroquinate synthase | |
| SB48_HM08orf03161 | 2 | 15 | 4.675221 | chorismate mutase | |
| SB48_HM08orf03162 | 0 | 14 | 3.704569 | histidinol-phosphate aminotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03137 | TCRTETOQM | 32 | 0.005 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03142 | BCTERIALGSPG | 28 | 0.024 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03146 | DNABINDINGHU | 132 | 2e-44 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
| 31 | SB48_HM08orf03186 | SB48_HM08orf03195 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03186 | 0 | 18 | 3.280365 | hypothetical protein | |
| SB48_HM08orf03188 | 0 | 18 | 3.993264 | MazG nucleotide pyrophosphohydrolase | |
| SB48_HM08orf03190 | 1 | 17 | 4.619536 | dihydrodipicolinate reductase | |
| SB48_HM08orf03193 | 1 | 17 | 4.265647 | LmbE family protein | |
| SB48_HM08orf03194 | 1 | 17 | 4.213475 | glycosyl transferase family protein | |
| SB48_HM08orf03195 | 0 | 15 | 3.445390 | tRNA cytidylyltransferase |
| 32 | SB48_HM08orf03244 | SB48_HM08orf03328 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03244 | 2 | 12 | 2.376170 | peptidase M32 carboxypeptidase Taq | |
| SB48_HM08orf03248 | 3 | 11 | 2.557134 | xanthine phosphoribosyltransferase | |
| SB48_HM08orf03250 | 2 | 15 | 2.959527 | xanthine permease | |
| SB48_HM08orf03252 | 2 | 13 | 1.194892 | hypothetical protein | |
| SB48_HM08orf03255 | 0 | 12 | 0.683727 | hypothetical protein | |
| SB48_HM08orf03257 | 0 | 13 | -0.034010 | dynamin | |
| SB48_HM08orf03259 | -1 | 21 | -7.137234 | MerR family transcriptional regulator | |
| SB48_HM08orf03262 | 0 | 23 | -8.111573 | glutamine synthetase | |
| SB48_HM08orf03264 | 4 | 31 | -10.600787 | hypothetical protein | |
| SB48_HM08orf03265 | 6 | 33 | -10.921921 | hypothetical protein | |
| SB48_HM08orf03266 | 7 | 35 | -11.856674 | hypothetical protein | |
| SB48_HM08orf03267 | 7 | 35 | -11.385560 | hypothetical protein | |
| SB48_HM08orf03268 | 6 | 27 | -8.077126 | hypothetical protein | |
| SB48_HM08orf03269 | 5 | 22 | -6.422500 | DNA polymerase III subunit epsilon | |
| SB48_HM08orf03271 | 5 | 26 | -6.162612 | hypothetical protein | |
| SB48_HM08orf03275 | 6 | 28 | -4.698259 | XRE family transcriptional regulator | |
| SB48_HM08orf03276 | 4 | 30 | -4.370265 | XRE family transcriptional regulator | |
| SB48_HM08orf03277 | 3 | 25 | -4.012947 | hypothetical protein | |
| SB48_HM08orf03278 | 6 | 24 | -4.220980 | hypothetical protein | |
| SB48_HM08orf03279 | 6 | 25 | -4.297781 | hypothetical protein | |
| SB48_HM08orf03280 | 5 | 27 | -4.549534 | hypothetical protein | |
| SB48_HM08orf03281 | 4 | 25 | -4.308794 | hypothetical protein | |
| SB48_HM08orf03282 | 4 | 24 | -3.990804 | hypothetical protein | |
| SB48_HM08orf03283 | 5 | 27 | -4.218610 | primosome subunit DnaD | |
| SB48_HM08orf03284 | 0 | 26 | -5.363711 | single-stranded DNA-binding protein | |
| SB48_HM08orf03286 | 1 | 29 | -7.917777 | hypothetical protein | |
| SB48_HM08orf03285 | 1 | 26 | -7.541382 | hypothetical protein | |
| SB48_HM08orf03287 | 2 | 27 | -6.584444 | hypothetical protein | |
| SB48_HM08orf03289 | 2 | 29 | -6.918292 | hypothetical protein | |
| SB48_HM08orf03290 | 4 | 33 | -7.432322 | hypothetical protein | |
| SB48_HM08orf03291 | 6 | 36 | -7.735321 | hypothetical protein | |
| SB48_HM08orf03292 | 5 | 35 | -7.091213 | hypothetical protein | |
| SB48_HM08orf03293 | 5 | 36 | -6.682713 | phage transcriptional regulator, ArpU family | |
| SB48_HM08orf03294 | 4 | 35 | -6.136162 | e integrase family site specific recombinase | |
| SB48_HM08orf03295 | 2 | 25 | -1.341059 | thetical protein | |
| SB48_HM08orf03296 | 2 | 18 | -1.060481 | hypothetical protein | |
| SB48_HM08orf03297 | 1 | 18 | -0.912207 | HNH endonuclease | |
| SB48_HM08orf03299 | 2 | 19 | -1.452108 | hypothetical protein | |
| SB48_HM08orf03300 | 3 | 19 | -1.534888 | hypothetical protein | |
| SB48_HM08orf03302 | 3 | 18 | -2.197493 | hypothetical protein | |
| SB48_HM08orf03303 | 2 | 19 | -3.711355 | phage portal protein, HK97 family | |
| SB48_HM08orf03304 | 3 | 22 | -4.225097 | Clp protease | |
| SB48_HM08orf03306 | 3 | 23 | -4.346203 | capsid protein | |
| SB48_HM08orf03307 | 2 | 22 | -4.595254 | DNA packaging protein | |
| SB48_HM08orf03308 | 2 | 21 | -5.302302 | phage head-tail adaptor | |
| SB48_HM08orf03309 | 2 | 22 | -2.770712 | head-tail adaptor protein | |
| SB48_HM08orf03310 | 2 | 24 | -3.207556 | hypothetical protein | |
| SB48_HM08orf03311 | 2 | 26 | -3.555227 | phage major tail protein | |
| SB48_HM08orf03312 | 3 | 29 | -4.867264 | hypothetical protein | |
| SB48_HM08orf03313 | 5 | 31 | -5.051462 | hypothetical protein | |
| SB48_HM08orf03316 | 5 | 32 | -5.153499 | tail length tape measure protein | |
| SB48_HM08orf03317 | 6 | 38 | -7.794217 | phage sipho tail superfamily | |
| SB48_HM08orf03318 | 7 | 40 | -8.162173 | hypothetical protein | |
| SB48_HM08orf03319 | 8 | 42 | -8.929677 | Hypothetical protein | |
| SB48_HM08orf03320 | 10 | 40 | -6.557577 | hypothetical protein | |
| SB48_HM08orf03321 | 6 | 31 | -6.017447 | hypothetical protein | |
| SB48_HM08orf03322 | 4 | 32 | -6.190129 | hypothetical protein | |
| SB48_HM08orf03323 | 3 | 31 | -6.110000 | hypothetical protein | |
| SB48_HM08orf03324 | 2 | 25 | -4.587313 | hypothetical protein | |
| SB48_HM08orf03326 | 0 | 25 | -4.849851 | hypothetical protein | |
| SB48_HM08orf03327 | 0 | 22 | -4.168025 | N-acetylmuramoyl-L-alanine amidase | |
| SB48_HM08orf03328 | 0 | 20 | -3.649554 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03248 | NUCEPIMERASE | 28 | 0.046 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03252 | PF04335 | 29 | 0.021 | VirB8 type IV secretion protein | |
>PF04335#VirB8 type IV secretion protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03257 | GPOSANCHOR | 32 | 0.023 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03281 | ARGREPRESSOR | 26 | 0.008 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| 33 | SB48_HM08orf03343 | SB48_HM08orf03375 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03343 | 2 | 15 | -2.568144 | response regulator receiver protein | |
| SB48_HM08orf03346 | 0 | 14 | -0.055565 | hypothetical protein | |
| SB48_HM08orf03347 | -1 | 16 | 1.828120 | hypothetical protein | |
| SB48_HM08orf03348 | -1 | 16 | 2.622983 | hypothetical protein | |
| SB48_HM08orf03352 | 0 | 17 | 3.450945 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | |
| SB48_HM08orf03354 | 0 | 20 | 3.862985 | hypothetical protein | |
| SB48_HM08orf03355 | 0 | 19 | 3.861365 | D-alanyl-D-alanine | |
| SB48_HM08orf03356 | 1 | 19 | 3.725680 | peptidase U61 LD-carboxypeptidase A | |
| SB48_HM08orf03358 | 0 | 17 | 2.700778 | hypothetical protein | |
| SB48_HM08orf03359 | -2 | 14 | 0.850811 | hypothetical protein | |
| SB48_HM08orf03361 | -1 | 13 | 0.216194 | hypothetical protein | |
| SB48_HM08orf03363 | -4 | 13 | 1.159917 | cold-shock DNA-binding domain-containing | |
| SB48_HM08orf03365 | -4 | 13 | 1.996011 | hypothetical protein | |
| SB48_HM08orf03366 | -2 | 12 | 2.672647 | manganese containing catalase | |
| SB48_HM08orf03367 | -2 | 13 | 2.313394 | hypothetical protein | |
| SB48_HM08orf03368 | -1 | 14 | 3.144002 | hypothetical protein | |
| SB48_HM08orf03369 | -2 | 14 | 3.719650 | N-acetyl-gamma-glutamyl-phosphate reductase | |
| SB48_HM08orf03370 | -1 | 16 | 4.093048 | arginine biosynthesis bifunctional protein ArgJ | |
| SB48_HM08orf03371 | -1 | 16 | 3.858894 | acetylglutamate kinase | |
| SB48_HM08orf03373 | -1 | 15 | 3.407256 | acetylornithine and succinylornithine | |
| SB48_HM08orf03374 | -2 | 15 | 3.415326 | carbamoyl-phosphate synthase small subunit | |
| SB48_HM08orf03375 | -2 | 16 | 3.312353 | carbamoyl-phosphate synthase large subunit |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03343 | HTHFIS | 94 | 6e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03371 | CARBMTKINASE | 52 | 7e-10 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 34 | SB48_HM08orf03398 | SB48_HM08orf03412 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03398 | 1 | 13 | 3.557233 | hypothetical protein | |
| SB48_HM08orf03399 | -1 | 12 | 4.071901 | FAD-dependent pyridine nucleotide-disulfide | |
| SB48_HM08orf03400 | -1 | 14 | 3.958988 | hypothetical protein | |
| SB48_HM08orf03402 | -2 | 14 | 3.796919 | hypothetical protein | |
| SB48_HM08orf03405 | -2 | 14 | 3.943820 | glutamate 5-kinase | |
| SB48_HM08orf03407 | -2 | 12 | 3.223409 | gamma-glutamyl phosphate reductase | |
| SB48_HM08orf03408 | 1 | 11 | 3.451762 | permease | |
| SB48_HM08orf03409 | 2 | 13 | 2.902657 | hypothetical protein | |
| SB48_HM08orf03410 | 1 | 12 | 3.216391 | phosphodiesterase | |
| SB48_HM08orf03412 | 0 | 10 | 3.169633 | selenide, water dikinase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03405 | CARBMTKINASE | 60 | 3e-12 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
| 35 | SB48_HM08orf03512 | SB48_HM08orf03523 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03512 | -2 | 13 | 3.725340 | hypothetical protein | |
| SB48_HM08orf03515 | -1 | 14 | 3.897679 | mechanosensitive ion channel MscS | |
| SB48_HM08orf03516 | -2 | 14 | 4.557671 | Fis family GAF modulated sigma-54 specific | |
| SB48_HM08orf03517 | -1 | 18 | 5.355690 | dihydrolipoamide dehydrogenase | |
| SB48_HM08orf03518 | 0 | 18 | 4.900985 | hypothetical protein | |
| SB48_HM08orf03520 | -1 | 16 | 4.482916 | transketolase central region | |
| SB48_HM08orf03521 | -2 | 14 | 2.836652 | dehydrogenase E1 component | |
| SB48_HM08orf03522 | -2 | 15 | 3.263092 | hypothetical protein | |
| SB48_HM08orf03523 | -3 | 13 | 3.327255 | membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03516 | HTHFIS | 376 | e-126 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 36 | SB48_HM08orf03541 | SB48_HM08orf03550 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03541 | 0 | 18 | -4.175758 | hypothetical protein | |
| SB48_HM08orf03542 | 0 | 18 | -4.267261 | major facilitator superfamily protein | |
| SB48_HM08orf03543 | 1 | 24 | -6.269497 | TetR family transcriptional regulator | |
| SB48_HM08orf03546 | 1 | 27 | -7.905785 | hypothetical protein | |
| SB48_HM08orf03547 | 1 | 27 | -7.840006 | N-acetyltransferase GCN5 | |
| SB48_HM08orf03550 | 0 | 24 | -5.219635 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03542 | TCRTETA | 46 | 1e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03543 | HTHTETR | 80 | 1e-20 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03547 | SACTRNSFRASE | 28 | 0.018 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03550 | SECFTRNLCASE | 29 | 0.003 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| 37 | SB48_HM08orf03569 | SB48_HM08orf03599 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03569 | 0 | 21 | -3.357701 | GCN5-like N-acetyltransferase | |
| SB48_HM08orf03570 | 0 | 21 | -3.905775 | GNAT family acetyltransferase | |
| SB48_HM08orf03571 | 0 | 22 | -4.595488 | N-acetyltransferase | |
| SB48_HM08orf03573 | 0 | 22 | -6.626573 | sporulation protein | |
| SB48_HM08orf03576 | 3 | 31 | -6.853016 | hypothetical protein | |
| SB48_HM08orf03577 | 0 | 21 | -3.580201 | hypothetical protein | |
| SB48_HM08orf03578 | 2 | 22 | -3.776885 | hypothetical protein | |
| SB48_HM08orf03580 | 4 | 21 | -3.119459 | hypothetical protein | |
| SB48_HM08orf03581 | 2 | 24 | -3.138609 | hypothetical protein | |
| SB48_HM08orf03583 | 1 | 23 | -2.507313 | hypothetical protein | |
| SB48_HM08orf03584 | 1 | 21 | -1.167433 | type 11 methyltransferase | |
| SB48_HM08orf03586 | 4 | 26 | -2.175220 | hypothetical protein | |
| SB48_HM08orf03587 | 4 | 28 | -1.692603 | hypothetical protein | |
| SB48_HM08orf03590 | 2 | 22 | -2.733553 | hypothetical protein | |
| SB48_HM08orf03589 | 1 | 20 | -0.842344 | hypothetical protein | |
| SB48_HM08orf03591 | 1 | 19 | -1.039425 | isocitrate/isopropylmalate dehydrogenase | |
| SB48_HM08orf03592 | 0 | 19 | -0.092611 | isocitrate/isopropylmalate dehydrogenase | |
| SB48_HM08orf03593 | -1 | 18 | 0.002001 | hypothetical protein | |
| SB48_HM08orf03594 | -1 | 19 | -1.264977 | signal peptidase I | |
| SB48_HM08orf03595 | 0 | 19 | -0.843367 | short chain dehydrogenase | |
| SB48_HM08orf03596 | 1 | 23 | -1.974081 | hypothetical protein | |
| SB48_HM08orf03597 | 2 | 22 | -1.958152 | 2-nitropropane dioxygenase | |
| SB48_HM08orf03598 | 2 | 27 | -5.390606 | hypothetical protein | |
| SB48_HM08orf03599 | 0 | 25 | -6.160127 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03569 | SACTRNSFRASE | 28 | 0.013 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03571 | SACTRNSFRASE | 56 | 1e-12 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03595 | DHBDHDRGNASE | 34 | 2e-04 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03597 | MICOLLPTASE | 30 | 0.018 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
| 38 | SB48_HM08orf03722 | SB48_HM08orf03732 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03722 | 0 | 15 | 3.117758 | hypothetical protein | |
| SB48_HM08orf03724 | 1 | 15 | 3.798581 | hypothetical protein | |
| SB48_HM08orf03725 | 2 | 20 | 3.847677 | SirA-like domain-containing protein | |
| SB48_HM08orf03727 | 1 | 20 | 4.288417 | Histidine biosynthesis bifunctional protein | |
| SB48_HM08orf03729 | 2 | 17 | 4.617610 | imidazoleglycerol phosphate synthase, cyclase | |
| SB48_HM08orf03731 | 1 | 16 | 4.148772 | phosphoribosylformimino-5-aminoimidazole | |
| SB48_HM08orf03732 | 1 | 15 | 4.113172 | imidazole glycerol phosphate synthase, glutamine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03725 | PF01206 | 89 | 2e-27 | SirA family protein | |
>PF01206#SirA family protein | |||||
| 39 | SB48_HM08orf03841 | SB48_HM08orf03891 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03841 | 2 | 15 | 1.561309 | hypothetical protein | |
| SB48_HM08orf03843 | 0 | 14 | 1.097086 | methionine sulfoxide reductase B | |
| SB48_HM08orf03844 | 1 | 13 | 0.875897 | peptide methionine sulfoxide reductase | |
| SB48_HM08orf03846 | -1 | 13 | 0.815916 | Fmu (Sun) domain-containing protein | |
| SB48_HM08orf03850 | -3 | 14 | -1.033682 | hypothetical protein | |
| SB48_HM08orf03852 | -3 | 15 | -0.079975 | GDSL family lipase | |
| SB48_HM08orf03853 | -3 | 17 | 0.778965 | hemolysin D | |
| SB48_HM08orf03854 | -3 | 16 | 2.487121 | dihydrofolate reductase | |
| SB48_HM08orf03855 | -1 | 15 | 3.134248 | thymidylate synthase | |
| SB48_HM08orf03856 | 0 | 13 | 2.488572 | hypothetical protein | |
| SB48_HM08orf03858 | 1 | 12 | 3.169621 | hypothetical protein | |
| SB48_HM08orf03860 | 0 | 11 | 3.742058 | hypothetical protein | |
| SB48_HM08orf03862 | 1 | 10 | 3.519520 | PBS lyase | |
| SB48_HM08orf03864 | 0 | 12 | 2.696761 | ABC transporter-like protein | |
| SB48_HM08orf03865 | -1 | 13 | 1.919844 | phosphohydrolase | |
| SB48_HM08orf03867 | -2 | 13 | 2.489966 | hypothetical protein | |
| SB48_HM08orf03869 | -1 | 14 | 2.024115 | Formate--tetrahydrofolate ligase | |
| SB48_HM08orf03870 | 1 | 24 | -1.586484 | hypothetical protein | |
| SB48_HM08orf03871 | 1 | 21 | 0.184021 | DtxR familyiron (metal) dependent repressor | |
| SB48_HM08orf03872 | -1 | 17 | 2.904594 | cold-shock DNA-binding domain-containing | |
| SB48_HM08orf03873 | -2 | 18 | 3.738603 | hypothetical protein | |
| SB48_HM08orf03877 | -2 | 16 | 3.064679 | hypothetical protein | |
| SB48_HM08orf03876 | -2 | 15 | 2.694778 | small, acid-soluble spore protein L | |
| SB48_HM08orf03880 | -2 | 15 | 2.328317 | 5-3 exonuclease | |
| SB48_HM08orf03881 | -3 | 13 | 1.454373 | aluminum resistance protein | |
| SB48_HM08orf03883 | -2 | 11 | -0.170691 | GTP-binding protein HflX | |
| SB48_HM08orf03885 | -3 | 14 | -2.291205 | stage V sporulation protein K | |
| SB48_HM08orf03888 | -3 | 17 | -2.104538 | hypothetical protein | |
| SB48_HM08orf03890 | -1 | 17 | -2.732422 | RNA chaperone Hfq | |
| SB48_HM08orf03891 | 0 | 17 | -3.190569 | tRNA delta(2)-isopentenylpyrophosphate |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03858 | STREPKINASE | 27 | 0.046 | Streptococcus streptokinase protein signature. | |
>STREPKINASE#Streptococcus streptokinase protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03864 | PERTACTIN | 32 | 0.012 | Pertactin signature. | |
>PERTACTIN#Pertactin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03885 | HTHFIS | 35 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 40 | SB48_HM08orf04056 | SB48_HM08orf04084 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04056 | 2 | 14 | -0.289294 | response regulator receiver protein | |
| SB48_HM08orf04058 | 2 | 15 | 0.210449 | CheC, inhibitor of MCP methylation / FliN fusion | |
| SB48_HM08orf04059 | 1 | 17 | -0.586115 | flagellar motor switch protein FliM | |
| SB48_HM08orf04061 | 2 | 13 | 2.617178 | flagellar basal body-associated protein FliL | |
| SB48_HM08orf04062 | 3 | 14 | 3.001944 | hypothetical protein | |
| SB48_HM08orf04063 | 3 | 15 | 2.214849 | flagellar hook-basal body protein | |
| SB48_HM08orf04065 | 1 | 15 | 2.687117 | hypothetical protein | |
| SB48_HM08orf04068 | 1 | 13 | 2.313313 | flagellar hook capping protein | |
| SB48_HM08orf04070 | -1 | 11 | 0.812015 | flagellar hook-length control protein | |
| SB48_HM08orf04072 | -1 | 12 | -1.252921 | MgtE intracellular region | |
| SB48_HM08orf04074 | 0 | 10 | -0.666664 | flagellar export protein FliJ | |
| SB48_HM08orf04076 | 0 | 10 | -0.129171 | flagellar protein export ATPase FliI | |
| SB48_HM08orf04077 | 2 | 11 | -0.791386 | flagellar assembly protein FliH | |
| SB48_HM08orf04078 | 3 | 11 | -0.940792 | transposase IS4 family protein | |
| SB48_HM08orf04079 | 3 | 11 | -0.940792 | flagellar motor switch protein FliG | |
| SB48_HM08orf04082 | 3 | 11 | -1.378400 | flagellar M-ring protein FliF | |
| SB48_HM08orf04084 | 3 | 12 | -1.380473 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04056 | HTHFIS | 102 | 4e-29 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04058 | FLGMOTORFLIN | 121 | 9e-36 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04059 | FLGMOTORFLIM | 345 | e-120 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04063 | FLGHOOKAP1 | 46 | 5e-08 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04065 | MYCMG045 | 30 | 0.002 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04072 | RTXTOXIND | 31 | 0.005 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04074 | FLGFLIJ | 34 | 1e-04 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04077 | FLGFLIH | 36 | 1e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04079 | FLGMOTORFLIG | 383 | e-135 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04082 | FLGMRINGFLIF | 306 | e-100 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04084 | FLGHOOKFLIE | 62 | 3e-16 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| 41 | SB48_HM08orf04307 | SB48_HM08orf04328 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04307 | 2 | 13 | 1.512516 | hypothetical protein | |
| SB48_HM08orf04309 | 2 | 13 | 1.359844 | stage V sporulation protein D | |
| SB48_HM08orf04310 | 3 | 15 | 0.603665 | penicillin-binding protein transpeptidase | |
| SB48_HM08orf04313 | 0 | 12 | -0.145818 | cell division protein FtsL | |
| SB48_HM08orf04314 | 1 | 14 | 1.008559 | S-adenosyl-methyltransferase MraW | |
| SB48_HM08orf04316 | 1 | 15 | 0.448834 | MraZ protein | |
| SB48_HM08orf04317 | 1 | 13 | 0.194146 | hypothetical protein | |
| SB48_HM08orf04319 | 0 | 14 | 1.032159 | hypothetical protein | |
| SB48_HM08orf04322 | 0 | 13 | 0.798427 | hypothetical protein | |
| SB48_HM08orf04324 | 0 | 17 | 0.188726 | 2-dehydropantoate 2-reductase | |
| SB48_HM08orf04325 | 3 | 13 | 0.658262 | hypothetical protein | |
| SB48_HM08orf04326 | 4 | 13 | 1.202977 | N-acetyltransferase GCN5 | |
| SB48_HM08orf04328 | 5 | 13 | 1.584628 | transcription factor, RsfA family |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04328 | IGASERPTASE | 31 | 0.003 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| 42 | SB48_HM08orf04468 | SB48_HM08orf04497 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04468 | 2 | 20 | 0.920834 | hypothetical protein | |
| SB48_HM08orf04469 | 1 | 20 | 0.994504 | hypothetical protein | |
| SB48_HM08orf04471 | 1 | 19 | 1.312102 | hypothetical protein | |
| SB48_HM08orf04472 | 1 | 19 | 1.350853 | abortive infection protein | |
| SB48_HM08orf04474 | 1 | 19 | 1.599347 | hypothetical protein | |
| SB48_HM08orf04477 | 3 | 23 | 1.837770 | ATPase AAA-2 domain-containing protein | |
| SB48_HM08orf04481 | 3 | 19 | 0.216194 | hypothetical protein | |
| SB48_HM08orf04482 | 2 | 16 | -5.471906 | sporulation protein Spo0E | |
| SB48_HM08orf04483 | 3 | 19 | -6.765328 | hypothetical protein | |
| SB48_HM08orf04485 | 1 | 13 | -5.313979 | hypothetical protein | |
| SB48_HM08orf04487 | 2 | 16 | -5.638393 | methylated-DNA--protein-cysteine | |
| SB48_HM08orf04488 | 2 | 18 | -7.312679 | hypothetical protein | |
| SB48_HM08orf04490 | 1 | 18 | -7.055498 | transposase IS4 family protein | |
| SB48_HM08orf04491 | 3 | 20 | -2.891277 | hypothetical protein | |
| SB48_HM08orf04493 | 3 | 20 | -1.420540 | histidine kinase | |
| SB48_HM08orf04495 | 9 | 26 | -0.133974 | hypothetical protein | |
| SB48_HM08orf04496 | 4 | 18 | 1.919641 | hypothetical protein | |
| SB48_HM08orf04497 | 4 | 17 | 1.778590 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04477 | HTHFIS | 34 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04493 | PF06580 | 31 | 0.012 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| 43 | SB48_HM08orf04513 | SB48_HM08orf04551 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04513 | -1 | 19 | -3.010087 | hypothetical protein | |
| SB48_HM08orf04514 | -1 | 18 | -1.641509 | oxidoreductase domain-containing protein | |
| SB48_HM08orf04517 | 0 | 19 | 3.094282 | hypothetical protein | |
| SB48_HM08orf04516 | 0 | 21 | 3.468370 | hypothetical protein | |
| SB48_HM08orf04519 | 0 | 17 | 1.102855 | general stress protein | |
| SB48_HM08orf04520 | 1 | 20 | 0.941282 | hypothetical protein | |
| SB48_HM08orf04522 | 1 | 21 | 0.029535 | hypothetical protein | |
| SB48_HM08orf04523 | 1 | 21 | -1.198887 | membrane protein | |
| SB48_HM08orf04524 | 2 | 21 | -3.664099 | hypothetical protein | |
| SB48_HM08orf04525 | 2 | 22 | -4.257497 | dihydropteridine reductase | |
| SB48_HM08orf04526 | 4 | 27 | -6.494881 | hypothetical protein | |
| SB48_HM08orf04527 | 4 | 26 | -5.197833 | BadM/Rrf2 family transcriptional regulator | |
| SB48_HM08orf04529 | 3 | 22 | -3.552122 | hypothetical protein | |
| SB48_HM08orf04530 | 3 | 22 | -2.184363 | fumarylacetoacetate hydrolase | |
| SB48_HM08orf04532 | 3 | 22 | -3.496266 | hypothetical protein | |
| SB48_HM08orf04533 | 3 | 21 | -3.868028 | hypothetical protein | |
| SB48_HM08orf04535 | 3 | 22 | -3.195645 | hypothetical protein | |
| SB48_HM08orf04536 | 2 | 20 | -2.816896 | short-chain dehydrogenase/reductase SDR | |
| SB48_HM08orf04539 | 1 | 24 | -3.861942 | hypothetical protein | |
| SB48_HM08orf04541 | 1 | 23 | -4.454852 | general substrate transporter | |
| SB48_HM08orf04542 | 0 | 24 | -4.202912 | hypothetical protein | |
| SB48_HM08orf04543 | -1 | 25 | -3.725444 | hypothetical protein | |
| SB48_HM08orf04546 | 1 | 26 | -4.808532 | tate dehydrogenase | |
| SB48_HM08orf04547 | 7 | 27 | -9.328483 | hypothetical protein | |
| SB48_HM08orf04549 | 1 | 17 | -4.841304 | hypothetical protein | |
| SB48_HM08orf04550 | 1 | 18 | -5.123094 | hypothetical protein | |
| SB48_HM08orf04551 | 1 | 19 | -3.900970 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04519 | HELNAPAPROT | 163 | 6e-55 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04536 | DHBDHDRGNASE | 120 | 9e-35 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04541 | TCRTETA | 51 | 7e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04543 | 60KDINNERMP | 25 | 0.017 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| 44 | SB48_HM08orf04591 | SB48_HM08orf04603 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04591 | 4 | 20 | -3.551483 | chromate transporter | |
| SB48_HM08orf04592 | 7 | 29 | -6.043083 | RNA-directed DNA polymerase | |
| SB48_HM08orf04594 | 6 | 33 | -7.302066 | acetoacetyl-CoA synthetase | |
| SB48_HM08orf04595 | 10 | 46 | -10.463414 | hypothetical protein | |
| SB48_HM08orf04596 | 10 | 44 | -9.300561 | hypothetical protein | |
| SB48_HM08orf04597 | 11 | 44 | -9.034823 | AAA ATPase | |
| SB48_HM08orf04598 | 10 | 42 | -8.287809 | hypothetical protein | |
| SB48_HM08orf04600 | 5 | 27 | -5.481119 | hypothetical protein | |
| SB48_HM08orf04601 | 5 | 21 | -3.494461 | hypothetical protein | |
| SB48_HM08orf04603 | 3 | 14 | -2.495866 | hypothetical protein |
| 45 | SB48_HM08orf04629 | SB48_HM08orf04688 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04629 | -2 | 28 | -3.972358 | hypothetical protein | |
| SB48_HM08orf04630 | 1 | 29 | -6.536319 | hypothetical protein | |
| SB48_HM08orf04633 | 4 | 31 | -7.766656 | hypothetical protein | |
| SB48_HM08orf04634 | 3 | 32 | -8.203530 | hypothetical protein | |
| SB48_HM08orf04636 | 5 | 38 | -9.879044 | hypothetical protein | |
| SB48_HM08orf04638 | 11 | 44 | -12.497570 | hypothetical protein | |
| SB48_HM08orf04640 | 8 | 40 | -11.386479 | hypothetical protein | |
| SB48_HM08orf04641 | 1 | 21 | -3.733113 | hypothetical protein | |
| SB48_HM08orf04642 | -1 | 14 | -1.599712 | hypothetical protein | |
| SB48_HM08orf04643 | -2 | 14 | -0.432668 | hypothetical protein | |
| SB48_HM08orf04644 | -2 | 15 | -0.023556 | hypothetical protein | |
| SB48_HM08orf04645 | -2 | 14 | 0.532451 | hypothetical protein | |
| SB48_HM08orf04647 | -1 | 14 | -0.303422 | esterase | |
| SB48_HM08orf04648 | 1 | 15 | -1.571083 | phosphoesterase HXTX | |
| SB48_HM08orf04649 | 3 | 21 | -2.119048 | GCN5-like N-acetyltransferase | |
| SB48_HM08orf04650 | 5 | 29 | -3.903536 | hypothetical protein | |
| SB48_HM08orf04652 | 2 | 24 | -4.585950 | hypothetical protein | |
| SB48_HM08orf04654 | 4 | 27 | -5.117139 | protein YjcC | |
| SB48_HM08orf04659 | 3 | 30 | -4.261328 | hypothetical protein | |
| SB48_HM08orf04662 | 1 | 28 | -3.419220 | hypothetical protein | |
| SB48_HM08orf04664 | -2 | 19 | -0.372416 | hypothetical protein | |
| SB48_HM08orf04665 | -1 | 17 | 0.221284 | hypothetical protein | |
| SB48_HM08orf04667 | 2 | 18 | 2.212827 | hypothetical protein | |
| SB48_HM08orf04668 | 1 | 16 | 2.335284 | hypothetical protein | |
| SB48_HM08orf04669 | 0 | 13 | 1.969296 | stage V sporulation protein AE | |
| SB48_HM08orf04671 | 0 | 12 | 1.552839 | stage V sporulation protein AD | |
| SB48_HM08orf04673 | 1 | 16 | -1.824570 | stage V sporulation protein AC | |
| SB48_HM08orf04675 | -1 | 15 | -1.288375 | hypothetical protein | |
| SB48_HM08orf04677 | -3 | 19 | -0.989375 | hypothetical protein | |
| SB48_HM08orf04678 | 1 | 17 | -0.544516 | hypothetical protein | |
| SB48_HM08orf04679 | 2 | 18 | -0.442745 | hypothetical protein | |
| SB48_HM08orf04680 | 0 | 14 | 0.601246 | hypothetical protein | |
| SB48_HM08orf04682 | -1 | 13 | 1.930786 | hypothetical protein | |
| SB48_HM08orf04683 | 0 | 18 | 1.352350 | hypothetical protein | |
| SB48_HM08orf04685 | 0 | 17 | 1.092521 | hypothetical protein | |
| SB48_HM08orf04686 | -2 | 18 | 1.429735 | hypothetical protein | |
| SB48_HM08orf04687 | -2 | 17 | 2.831453 | enoyl-acyl carrier protein reductase | |
| SB48_HM08orf04688 | -1 | 19 | 3.421567 | metallophosphatase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04629 | TYPE3IMQPROT | 24 | 0.021 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04649 | AUTOINDCRSYN | 31 | 0.001 | Autoinducer synthesis protein signature. | |
>AUTOINDCRSYN#Autoinducer synthesis protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04682 | IGASERPTASE | 30 | 0.007 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04687 | DHBDHDRGNASE | 54 | 8e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 46 | SB48_HM08orf04703 | SB48_HM08orf04711 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04703 | 6 | 28 | -5.702828 | hypothetical protein | |
| SB48_HM08orf04704 | 4 | 30 | -5.377587 | hypothetical protein | |
| SB48_HM08orf04705 | 4 | 28 | -4.590211 | hypothetical protein | |
| SB48_HM08orf04707 | 5 | 29 | -5.140449 | hypothetical protein | |
| SB48_HM08orf04709 | 4 | 30 | -3.710791 | hypothetical protein | |
| SB48_HM08orf04710 | 6 | 30 | -2.447132 | hypothetical protein | |
| SB48_HM08orf04711 | 8 | 25 | 1.562847 | hypothetical protein |
| 47 | SB48_HM08orf04761 | SB48_HM08orf04775 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04761 | 1 | 14 | 3.074466 | ABC transporter-like protein | |
| SB48_HM08orf04762 | 0 | 13 | 3.122670 | oligopeptide/dipeptide ABC transporter ATPase | |
| SB48_HM08orf04764 | 1 | 11 | 2.726270 | hypothetical protein | |
| SB48_HM08orf04766 | 0 | 11 | 4.160608 | hypothetical protein | |
| SB48_HM08orf04769 | 0 | 12 | 4.448762 | 3-oxoacyl-ACP synthase | |
| SB48_HM08orf04772 | 1 | 15 | 3.085435 | 3-oxoacyl-ACP synthase | |
| SB48_HM08orf04773 | 1 | 16 | 3.089334 | hypothetical protein | |
| SB48_HM08orf04774 | 1 | 16 | 3.149899 | hypothetical protein | |
| SB48_HM08orf04775 | 0 | 16 | 3.438263 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04775 | NUCEPIMERASE | 35 | 2e-04 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| 48 | SB48_HM08orf04884 | SB48_HM08orf04891 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04884 | 1 | 22 | -4.657630 | hypothetical protein | |
| SB48_HM08orf04886 | 1 | 22 | -4.447437 | hypothetical protein | |
| SB48_HM08orf04887 | 1 | 21 | -4.931167 | hypothetical protein | |
| SB48_HM08orf04888 | -1 | 25 | -5.234916 | hypothetical protein | |
| SB48_HM08orf04889 | -3 | 23 | -3.664099 | MarR family transcriptional regulator | |
| SB48_HM08orf04890 | 1 | 18 | -4.257258 | hypothetical protein | |
| SB48_HM08orf04891 | 2 | 19 | -3.787173 | hypothetical protein |
| 49 | SB48_HM08orf04970 | SB48_HM08orf05024 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04970 | -2 | 13 | -4.516988 | membrane protein | |
| SB48_HM08orf04972 | -1 | 12 | -4.775092 | hypothetical protein | |
| SB48_HM08orf04973 | 1 | 15 | -5.380827 | hypothetical protein | |
| SB48_HM08orf04975 | 0 | 15 | -5.471201 | hypothetical protein | |
| SB48_HM08orf04976 | 0 | 14 | -5.373082 | CDP-glycerol:poly(glycerophosphate) | |
| SB48_HM08orf04978 | 0 | 18 | -5.026719 | ABC-2 type transporter | |
| SB48_HM08orf04980 | -2 | 13 | 0.434011 | CDP-glycerol:poly(glycerophosphate) | |
| SB48_HM08orf04984 | 1 | 18 | 3.072265 | CDP-glycerol:glycerophosphate | |
| SB48_HM08orf04985 | 2 | 22 | 3.636405 | hypothetical protein | |
| SB48_HM08orf04986 | 2 | 21 | 3.693931 | glycerol-3-phosphate cytidylyltransferase | |
| SB48_HM08orf04987 | 2 | 21 | 3.570719 | hypothetical protein | |
| SB48_HM08orf04990 | 2 | 20 | 2.893864 | excinuclease ABC subunit A | |
| SB48_HM08orf04992 | 1 | 13 | -2.890035 | excinuclease ABC subunit B | |
| SB48_HM08orf04993 | 1 | 17 | -8.981864 | hypothetical protein | |
| SB48_HM08orf04995 | 1 | 19 | -8.948522 | hypothetical protein | |
| SB48_HM08orf04997 | -1 | 13 | -6.930932 | HD superfamily-like hydrolase | |
| SB48_HM08orf05001 | 0 | 14 | -6.729560 | hypothetical protein | |
| SB48_HM08orf05002 | -1 | 14 | -5.978306 | transposase IS4 family protein | |
| SB48_HM08orf05004 | -2 | 13 | -2.732916 | multidrug transporter | |
| SB48_HM08orf05005 | -2 | 10 | -1.588141 | hypothetical protein | |
| SB48_HM08orf05007 | -3 | 10 | -0.334806 | hypothetical protein | |
| SB48_HM08orf05008 | -1 | 12 | 1.673093 | glycosyl transferase | |
| SB48_HM08orf05009 | 1 | 15 | 3.025829 | hypothetical protein | |
| SB48_HM08orf05011 | 2 | 13 | 3.169501 | phosphate ABC transporter ATPase | |
| SB48_HM08orf05013 | 2 | 14 | 3.426656 | phosphate ABC transporter ATPase | |
| SB48_HM08orf05016 | 3 | 16 | 2.554001 | phosphate ABC transporter inner membrane subunit | |
| SB48_HM08orf05017 | 3 | 13 | 2.067073 | phosphate ABC transporter permease | |
| SB48_HM08orf05020 | 4 | 14 | 1.401407 | hypothetical protein | |
| SB48_HM08orf05023 | 3 | 15 | 1.373858 | hypothetical protein | |
| SB48_HM08orf05024 | 2 | 16 | 1.216738 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04986 | LPSBIOSNTHSS | 42 | 8e-08 | Lipopolysaccharide core biosynthesis protein signat... | |
>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein | |||||
| 50 | SB48_HM08orf05070 | SB48_HM08orf05092 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05070 | -1 | 15 | 3.399278 | peptide chain release factor 2 | |
| SB48_HM08orf05071 | -1 | 17 | 3.938507 | hypothetical protein | |
| SB48_HM08orf05074 | -1 | 18 | 4.402259 | preprotein translocase subunit SecA | |
| SB48_HM08orf05075 | 0 | 19 | 3.518070 | hypothetical protein | |
| SB48_HM08orf05076 | -1 | 18 | 3.812978 | hypothetical protein | |
| SB48_HM08orf05079 | 0 | 16 | 3.158137 | gamma-glutamyltransferase | |
| SB48_HM08orf05080 | 0 | 17 | -0.441254 | hypothetical protein | |
| SB48_HM08orf05081 | 0 | 17 | -0.675779 | hypothetical protein | |
| SB48_HM08orf05083 | 1 | 18 | -1.025301 | sigma-54 modulation protein | |
| SB48_HM08orf05084 | 0 | 16 | 0.148012 | flagellar protein | |
| SB48_HM08orf05085 | 0 | 15 | -0.170445 | flagellar protein FliS | |
| SB48_HM08orf05086 | 0 | 15 | 1.015499 | hypothetical protein | |
| SB48_HM08orf05088 | 4 | 22 | 2.240649 | flagellar protein FlaG | |
| SB48_HM08orf05092 | 3 | 25 | 1.273148 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05070 | PRPHPHLPASEC | 29 | 0.033 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05074 | SECA | 1216 | 0.0 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 51 | SB48_HM08orf05111 | SB48_HM08orf05138 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05111 | 0 | 21 | -3.450270 | alanine glycine permease | |
| SB48_HM08orf05110 | 2 | 24 | -4.992567 | hypothetical protein | |
| SB48_HM08orf05112 | 2 | 25 | -4.419598 | MFS transporter | |
| SB48_HM08orf05113 | 2 | 25 | -5.686966 | hypothetical protein | |
| SB48_HM08orf05115 | 3 | 25 | -6.251455 | L-arabinose operon protein | |
| SB48_HM08orf05116 | 2 | 21 | -5.645597 | methyltransferase | |
| SB48_HM08orf05118 | 2 | 21 | -4.813214 | glycerol-3-phosphate responsive antiterminator | |
| SB48_HM08orf05119 | 2 | 16 | -2.946250 | flagellin | |
| SB48_HM08orf05120 | -1 | 14 | -0.839603 | hypothetical protein | |
| SB48_HM08orf05121 | -2 | 17 | 1.637526 | hypothetical protein | |
| SB48_HM08orf05122 | -2 | 18 | 2.413050 | carbon storage regulator | |
| SB48_HM08orf05123 | -2 | 15 | 1.914836 | Flagellar assembly factor FliW | |
| SB48_HM08orf05125 | -2 | 14 | 2.529250 | flagellar hook-associated protein 3 | |
| SB48_HM08orf05127 | -1 | 14 | 4.263204 | flagellar hook-associated protein FlgK | |
| SB48_HM08orf05129 | 2 | 17 | 4.464620 | FlgN family protein | |
| SB48_HM08orf05131 | 1 | 18 | 4.060695 | anti-sigma-28 factor FlgM family protein | |
| SB48_HM08orf05133 | 0 | 19 | 4.107214 | hypothetical protein | |
| SB48_HM08orf05134 | -1 | 16 | 4.015825 | phosphoribosyltransferase | |
| SB48_HM08orf05138 | 0 | 17 | 3.989253 | helicase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05112 | TCRTETA | 57 | 5e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05119 | FLAGELLIN | 136 | 1e-37 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05120 | SECA | 58 | 5e-11 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05125 | FLAGELLIN | 72 | 2e-16 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05127 | FLGHOOKAP1 | 195 | 1e-57 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 52 | SB48_HM08orf05220 | SB48_HM08orf05239 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05220 | 1 | 23 | -4.002670 | GABA permease | |
| SB48_HM08orf05221 | 2 | 26 | -7.013895 | class III aminotransferase | |
| SB48_HM08orf05222 | 3 | 30 | -8.797810 | hypothetical protein | |
| SB48_HM08orf05225 | 3 | 31 | -9.267950 | transposase IS4 | |
| SB48_HM08orf05227 | 2 | 29 | -9.374453 | hypothetical protein | |
| SB48_HM08orf05228 | 1 | 23 | -8.380573 | hypothetical protein | |
| SB48_HM08orf05229 | 0 | 21 | -6.204436 | bifunctional protein: transcriptional | |
| SB48_HM08orf05230 | 2 | 21 | -3.074233 | hypothetical protein | |
| SB48_HM08orf05231 | 3 | 20 | -2.803440 | hypothetical protein | |
| SB48_HM08orf05232 | 1 | 19 | -2.532711 | hypothetical protein | |
| SB48_HM08orf05235 | 2 | 21 | -2.886189 | allantoin permease | |
| SB48_HM08orf05236 | 2 | 24 | -2.827869 | allantoinase | |
| SB48_HM08orf05237 | 4 | 30 | -4.999837 | hypothetical protein | |
| SB48_HM08orf05239 | 3 | 31 | -6.179586 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05236 | UREASE | 42 | 6e-06 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 53 | SB48_HM08orf05350 | SB48_HM08orf05377 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05350 | -1 | 12 | 3.315477 | *hypothetical protein | |
| SB48_HM08orf05351 | -1 | 12 | 3.397368 | sodium:pantothenate symporter | |
| SB48_HM08orf05354 | -1 | 14 | 2.383803 | sodium:pantothenate symporter | |
| SB48_HM08orf05357 | -1 | 12 | 1.938553 | hypothetical protein | |
| SB48_HM08orf05358 | -2 | 11 | 2.366192 | UTP-glucose-1-phosphate uridylyltransferase | |
| SB48_HM08orf05360 | -3 | 15 | 3.833333 | carbohydrate kinase | |
| SB48_HM08orf05361 | -1 | 21 | 4.053736 | hypothetical protein | |
| SB48_HM08orf05363 | -1 | 19 | 4.251652 | hypothetical protein | |
| SB48_HM08orf05365 | -2 | 17 | 3.790785 | hypothetical protein | |
| SB48_HM08orf05367 | -2 | 16 | 4.198700 | homoserine dehydrogenase | |
| SB48_HM08orf05368 | -1 | 15 | 3.721303 | threonine synthase | |
| SB48_HM08orf05369 | -1 | 13 | 3.609225 | homoserine kinase | |
| SB48_HM08orf05371 | -2 | 11 | 2.608988 | ABC transporter-like protein | |
| SB48_HM08orf05373 | -2 | 11 | 2.783464 | NMT1/THI5-like domain-containing protein | |
| SB48_HM08orf05375 | -2 | 12 | 3.669797 | ABC transporter integral membrane protein | |
| SB48_HM08orf05376 | -2 | 14 | 3.922943 | hypothetical protein | |
| SB48_HM08orf05377 | -2 | 13 | 3.881839 | amidase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05371 | PF05272 | 28 | 0.038 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 54 | SB48_HM08orf05473 | SB48_HM08orf05483 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05473 | 0 | 22 | -6.457904 | hypothetical protein | |
| SB48_HM08orf05474 | 0 | 21 | -5.813449 | hypothetical protein | |
| SB48_HM08orf05475 | -2 | 21 | -5.559775 | hypothetical protein | |
| SB48_HM08orf05476 | 0 | 24 | -5.769402 | KpsF/GutQ family protein | |
| SB48_HM08orf05477 | 0 | 29 | -7.445086 | 2-dehydro-3-deoxyphosphooctonate aldolase | |
| SB48_HM08orf05480 | 2 | 36 | -9.331267 | PTS sugar transporter | |
| SB48_HM08orf05479 | 4 | 37 | -8.651759 | hypothetical protein | |
| SB48_HM08orf05481 | 4 | 36 | -8.748367 | 6-phospho-beta-glucosidase | |
| SB48_HM08orf05482 | 6 | 39 | -8.883921 | PTS cellobiose transporter subunit IIC | |
| SB48_HM08orf05483 | 2 | 30 | -7.694815 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05473 | TYPE3IMSPROT | 32 | 0.003 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| 55 | SB48_HM08orf05520 | SB48_HM08orf05535 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05520 | 2 | 18 | -2.883097 | GntR family transcriptional regulator | |
| SB48_HM08orf05521 | 3 | 19 | -4.098922 | L-lactate transport | |
| SB48_HM08orf05522 | 5 | 26 | -6.262891 | hypothetical protein | |
| SB48_HM08orf05523 | 5 | 25 | -6.261164 | amino acid permease | |
| SB48_HM08orf05524 | 4 | 25 | -6.930556 | acetamidase/Formamidase | |
| SB48_HM08orf05526 | 4 | 25 | -8.323076 | hypothetical protein | |
| SB48_HM08orf05527 | 7 | 27 | -8.527017 | two component AraC family transcriptional | |
| SB48_HM08orf05528 | 8 | 33 | -8.986021 | hypothetical protein | |
| SB48_HM08orf05530 | 4 | 29 | -8.502625 | hypothetical protein | |
| SB48_HM08orf05531 | 5 | 29 | -8.195575 | hypothetical protein | |
| SB48_HM08orf05532 | 5 | 25 | -6.872559 | hypothetical protein | |
| SB48_HM08orf05533 | 2 | 20 | -3.882100 | hypothetical protein | |
| SB48_HM08orf05534 | 2 | 19 | -2.945774 | hypothetical protein | |
| SB48_HM08orf05535 | 3 | 16 | -0.963099 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05527 | HTHFIS | 74 | 1e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05528 | PF06580 | 164 | 3e-51 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05531 | FLGFLIH | 27 | 0.008 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 56 | SB48_HM08orf05552 | SB48_HM08orf05563 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05552 | -2 | 13 | 3.077959 | hypothetical protein | |
| SB48_HM08orf05551 | -2 | 12 | 3.378185 | hypothetical protein | |
| SB48_HM08orf05555 | -2 | 13 | 3.174718 | alpha-xylosidase | |
| SB48_HM08orf05557 | -2 | 11 | 3.524863 | hypothetical protein | |
| SB48_HM08orf05558 | -2 | 12 | 4.098742 | Fis family PAS modulated sigma-54 specific | |
| SB48_HM08orf05559 | -1 | 15 | 3.534009 | alcohol dehydrogenase | |
| SB48_HM08orf05560 | 1 | 17 | 3.248909 | hypothetical protein | |
| SB48_HM08orf05561 | 1 | 17 | 3.524282 | hypothetical protein | |
| SB48_HM08orf05563 | 0 | 17 | 3.632723 | methylmalonate semialdehyde dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05552 | GPOSANCHOR | 43 | 3e-06 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05558 | HTHFIS | 414 | e-142 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 57 | SB48_HM08orf05671 | SB48_HM08orf05688 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05671 | 2 | 15 | -3.246958 | ornithine cyclodeaminase | |
| SB48_HM08orf05672 | 0 | 15 | -2.719877 | hypothetical protein | |
| SB48_HM08orf05673 | -1 | 16 | -2.636358 | hypothetical protein | |
| SB48_HM08orf05674 | -1 | 13 | -1.568222 | hypothetical protein | |
| SB48_HM08orf05677 | 1 | 12 | -1.508420 | aldo/keto reductase | |
| SB48_HM08orf05678 | 2 | 16 | -2.099802 | hypothetical protein | |
| SB48_HM08orf05680 | 2 | 15 | -2.109379 | transcriptional regulator | |
| SB48_HM08orf05681 | 5 | 17 | -1.736857 | hypothetical protein | |
| SB48_HM08orf05682 | 5 | 17 | -1.554654 | amino acid permease | |
| SB48_HM08orf05683 | 5 | 18 | -2.107219 | hypothetical protein | |
| SB48_HM08orf05684 | 5 | 18 | -2.174667 | CRISPR-associated protein | |
| SB48_HM08orf05685 | 5 | 18 | -2.426183 | hypothetical protein | |
| SB48_HM08orf05686 | 5 | 19 | -2.550996 | glycoside hydrolase family protein | |
| SB48_HM08orf05687 | 0 | 22 | -4.891580 | hypothetical protein | |
| SB48_HM08orf05688 | 0 | 20 | -3.318611 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05674 | FLGFLIH | 34 | 6e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 58 | SB48_HM08orf05700 | SB48_HM08orf05834 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05700 | 2 | 19 | -1.321286 | hypothetical protein | |
| SB48_HM08orf05702 | 2 | 20 | -2.123843 | hypothetical protein | |
| SB48_HM08orf05705 | 2 | 21 | -2.884933 | ATPase AAA | |
| SB48_HM08orf05707 | 2 | 22 | -3.512302 | hypothetical protein | |
| SB48_HM08orf05709 | 3 | 21 | -5.347140 | hypothetical protein | |
| SB48_HM08orf05710 | 2 | 20 | -5.641246 | hypothetical protein | |
| SB48_HM08orf05712 | 3 | 19 | -5.342546 | hypothetical protein | |
| SB48_HM08orf05713 | 3 | 18 | -5.164090 | PTS galactitol transporter subunit IIB | |
| SB48_HM08orf05714 | 2 | 18 | -5.084250 | hypothetical protein | |
| SB48_HM08orf05715 | 3 | 20 | -5.219713 | hypothetical protein | |
| SB48_HM08orf05717 | 2 | 19 | -5.454190 | phosphosugar isomerase | |
| SB48_HM08orf05718 | 2 | 20 | -5.865545 | PTS system mannose/fructose/sorbose family | |
| SB48_HM08orf05719 | 3 | 24 | -5.705482 | PTS system sorbose-specific transporter subunit | |
| SB48_HM08orf05720 | 2 | 26 | -5.348434 | PTS system sorbose subfamily transporter subunit | |
| SB48_HM08orf05721 | 3 | 28 | -5.771375 | PTS mannose transporter subunit IIA | |
| SB48_HM08orf05722 | 3 | 27 | -5.911478 | hypothetical protein | |
| SB48_HM08orf05723 | 3 | 31 | -4.754667 | hypothetical protein | |
| SB48_HM08orf05724 | 3 | 29 | -4.637631 | permease | |
| SB48_HM08orf05726 | 2 | 27 | -4.843484 | 5-oxoprolinase | |
| SB48_HM08orf05727 | 3 | 26 | -6.512786 | hydantoinase/oxoprolinase | |
| SB48_HM08orf05728 | 1 | 25 | -6.639025 | XRE family transcriptional regulator | |
| SB48_HM08orf05729 | 2 | 25 | -4.305165 | hypothetical protein | |
| SB48_HM08orf05731 | 0 | 23 | -4.207301 | GntR family transcriptional regulator | |
| SB48_HM08orf05733 | 0 | 22 | -3.217028 | glucosamine/galactosamine-6-phosphate isomerase | |
| SB48_HM08orf05736 | 0 | 20 | -2.873641 | hypothetical protein | |
| SB48_HM08orf05737 | 0 | 21 | -2.512814 | PTS system mannose/fructose/sorbose family | |
| SB48_HM08orf05738 | 1 | 22 | -5.451136 | PTS system sorbose-specific transporter subunit | |
| SB48_HM08orf05739 | 4 | 29 | -9.644857 | PTS N-acetylgalactosamine transporter subunit | |
| SB48_HM08orf05740 | 9 | 41 | -13.285224 | PTS system fructose subfamily transporter | |
| SB48_HM08orf05742 | 9 | 39 | -13.283226 | hypothetical protein | |
| SB48_HM08orf05744 | 7 | 36 | -12.037532 | hypothetical protein | |
| SB48_HM08orf05745 | 8 | 33 | -9.812618 | hypothetical protein | |
| SB48_HM08orf05746 | 8 | 31 | -8.535031 | hypothetical protein | |
| SB48_HM08orf05747 | 7 | 27 | -6.015510 | hypothetical protein | |
| SB48_HM08orf05748 | 5 | 20 | -2.694483 | hypothetical protein | |
| SB48_HM08orf05749 | 5 | 23 | -2.239457 | hypothetical protein | |
| SB48_HM08orf05750 | 5 | 22 | -2.200769 | hypothetical protein | |
| SB48_HM08orf05752 | 3 | 21 | -1.693942 | hypothetical protein | |
| SB48_HM08orf05754 | 2 | 21 | -1.590814 | type 11 methyltransferase | |
| SB48_HM08orf05755 | 3 | 24 | -1.566701 | Zn-dependent protease | |
| SB48_HM08orf05756 | 7 | 34 | 1.765978 | hypothetical protein | |
| SB48_HM08orf05757 | 5 | 32 | 1.459741 | hypothetical protein | |
| SB48_HM08orf05758 | 3 | 31 | -2.086836 | hypothetical protein | |
| SB48_HM08orf05759 | 3 | 26 | -3.098947 | hypothetical protein | |
| SB48_HM08orf05761 | 3 | 27 | -5.900772 | hypothetical protein | |
| SB48_HM08orf05762 | 3 | 27 | -6.201055 | hypothetical protein | |
| SB48_HM08orf05763 | 3 | 27 | -6.254112 | hypothetical protein | |
| SB48_HM08orf05764 | 3 | 27 | -6.228365 | hypothetical protein | |
| SB48_HM08orf05767 | 3 | 27 | -6.312694 | hypothetical protein | |
| SB48_HM08orf05768 | 6 | 30 | -7.566448 | transposase family protein | |
| SB48_HM08orf05769 | 2 | 27 | -3.399089 | hypothetical protein | |
| SB48_HM08orf05771 | 1 | 18 | -1.288691 | hypothetical protein | |
| SB48_HM08orf05772 | 2 | 20 | -1.565992 | hypothetical protein | |
| SB48_HM08orf05773 | 2 | 19 | -2.932012 | hypothetical protein | |
| SB48_HM08orf05775 | 2 | 19 | -2.239423 | lysophospholipase | |
| SB48_HM08orf05778 | 1 | 16 | -2.133341 | hypothetical protein | |
| SB48_HM08orf05780 | 1 | 15 | -2.430281 | molecular chaperone GroES | |
| SB48_HM08orf05781 | 2 | 19 | -4.075606 | hypothetical protein | |
| SB48_HM08orf05784 | 2 | 19 | -4.057414 | NagC protein | |
| SB48_HM08orf05785 | 2 | 21 | -3.743871 | short-chain dehydrogenase/reductase SDR | |
| SB48_HM08orf05787 | 0 | 19 | -3.657313 | Actin-like ATPase domain-containing protein | |
| SB48_HM08orf05788 | 0 | 19 | -3.422597 | xylose transporter | |
| SB48_HM08orf05790 | 1 | 18 | -3.192289 | hypothetical protein | |
| SB48_HM08orf05792 | 0 | 18 | -2.934317 | hypothetical protein | |
| SB48_HM08orf05793 | 0 | 18 | -3.260432 | lambda repressor-like DNA-binding | |
| SB48_HM08orf05795 | 0 | 18 | -3.375325 | hypothetical protein | |
| SB48_HM08orf05796 | 0 | 18 | -3.733900 | xylulokinase | |
| SB48_HM08orf05798 | 3 | 26 | -7.170302 | xylose isomerase | |
| SB48_HM08orf05800 | 5 | 29 | -8.206507 | sugar (Glycoside-Pentoside-Hexuronide) | |
| SB48_HM08orf05801 | 5 | 30 | -8.806563 | ha-xylosidase | |
| SB48_HM08orf05802 | 7 | 39 | -11.118460 | hypothetical protein | |
| SB48_HM08orf05803 | 8 | 42 | -12.401988 | ose repressor | |
| SB48_HM08orf05804 | 10 | 47 | -14.144705 | ATP-dependent OLD family endonuclease | |
| SB48_HM08orf05807 | 10 | 52 | -15.140449 | hypothetical protein | |
| SB48_HM08orf05808 | 10 | 55 | -16.177304 | nucleotide sugar dehydrogenase | |
| SB48_HM08orf05809 | 15 | 61 | -17.669605 | mannose-6-phosphate isomerase | |
| SB48_HM08orf05811 | 13 | 56 | -17.127999 | glycosyltransferase | |
| SB48_HM08orf05813 | 8 | 49 | -14.391302 | hypothetical protein | |
| SB48_HM08orf05814 | 7 | 43 | -12.465832 | polysaccharide polymerase | |
| SB48_HM08orf05815 | 4 | 31 | -9.392521 | membrane protein | |
| SB48_HM08orf05816 | 3 | 24 | -6.399562 | polysaccharide synthesis sugar transferase | |
| SB48_HM08orf05817 | 0 | 14 | -3.264744 | UTP--glucose-1-phosphate uridylyltransferase | |
| SB48_HM08orf05818 | -2 | 12 | -2.636064 | protein-tyrosine-phosphatase | |
| SB48_HM08orf05819 | -1 | 10 | -2.371006 | tyrosine protein kinase | |
| SB48_HM08orf05820 | -2 | 13 | -3.117603 | lipopolysaccharide biosynthesis protein | |
| SB48_HM08orf05821 | -3 | 14 | -2.337090 | hypothetical protein | |
| SB48_HM08orf05823 | -3 | 15 | -0.995927 | hypothetical protein | |
| SB48_HM08orf05825 | -1 | 16 | -3.105059 | RNA polymerase sigma24 factor | |
| SB48_HM08orf05826 | -1 | 25 | 4.918969 | ComK family protein | |
| SB48_HM08orf05827 | 0 | 27 | 5.816645 | hypothetical protein | |
| SB48_HM08orf05828 | 1 | 29 | 6.084927 | hypothetical protein | |
| SB48_HM08orf05829 | 1 | 26 | 5.676931 | hypothetical protein | |
| SB48_HM08orf05831 | 2 | 23 | 5.245513 | hypothetical protein | |
| SB48_HM08orf05834 | 1 | 21 | 4.575996 | 5-methyltetrahydrofolate--homocysteine |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05705 | HTHFIS | 395 | e-135 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05710 | ACRIFLAVINRP | 27 | 0.007 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05715 | PF05043 | 31 | 0.023 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05722 | HTHFIS | 156 | 1e-42 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05767 | FLGFLGJ | 35 | 0.001 | Flagellar protein FlgJ signature. | |
>FLGFLGJ#Flagellar protein FlgJ signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05784 | YERSINIAYOPE | 38 | 2e-05 | Yersinia virulence determinant YopE protein signature. | |
>YERSINIAYOPE#Yersinia virulence determinant YopE protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05785 | DHBDHDRGNASE | 130 | 3e-39 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05795 | INTIMIN | 39 | 7e-05 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05796 | BCTLIPOCALIN | 29 | 0.030 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05800 | TCRTETB | 30 | 0.018 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| 59 | SB48_HM08orf05935 | SB48_HM08orf05949 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05935 | -3 | 12 | 3.446807 | NADH-dependent butanol dehydrogenase A | |
| SB48_HM08orf05938 | -3 | 11 | 3.496314 | Spore germination protein | |
| SB48_HM08orf05940 | -2 | 10 | 3.564108 | hypothetical protein | |
| SB48_HM08orf05941 | -2 | 10 | 4.081245 | dihydropyrimidinase | |
| SB48_HM08orf05942 | -2 | 10 | 4.466194 | dihydroorotate dehydrogenase family protein | |
| SB48_HM08orf05943 | -2 | 12 | 3.936474 | dihydropyrimidine dehydrogenase subunit A | |
| SB48_HM08orf05944 | -1 | 12 | 3.295287 | cytosine/purines uracil thiamine allantoin | |
| SB48_HM08orf05946 | -3 | 13 | 3.567583 | hydantoinase/carbamoylase family amidase | |
| SB48_HM08orf05947 | -2 | 15 | 3.744172 | iron-containing alcohol dehydrogenase | |
| SB48_HM08orf05949 | -2 | 12 | 3.453984 | class III aminotransferase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05941 | UREASE | 32 | 0.007 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| 60 | SB48_HM08orf05962 | SB48_HM08orf05978 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05962 | 2 | 21 | -5.527696 | hypothetical protein | |
| SB48_HM08orf05963 | 8 | 31 | -7.716650 | hypothetical protein | |
| SB48_HM08orf05965 | 8 | 33 | -8.176805 | hypothetical protein | |
| SB48_HM08orf05966 | 8 | 33 | -8.289802 | hypothetical protein | |
| SB48_HM08orf05967 | 7 | 34 | -8.071457 | hypothetical protein | |
| SB48_HM08orf05969 | 10 | 38 | -8.586314 | transposase | |
| SB48_HM08orf05970 | 9 | 41 | -4.411316 | hypothetical protein | |
| SB48_HM08orf05972 | 8 | 38 | -4.744845 | hypothetical protein | |
| SB48_HM08orf05974 | 5 | 36 | -4.736739 | hypothetical protein | |
| SB48_HM08orf05975 | -1 | 22 | -3.348215 | hypothetical protein | |
| SB48_HM08orf05976 | -2 | 16 | -2.593584 | hypothetical protein | |
| SB48_HM08orf05977 | -1 | 18 | -2.482784 | hypothetical protein | |
| SB48_HM08orf05978 | 2 | 21 | -0.611426 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05962 | SYCDCHAPRONE | 34 | 5e-04 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
| 61 | SB48_HM08orf06011 | SB48_HM08orf06103 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf06011 | 1 | 19 | 3.780100 | hypothetical protein | |
| SB48_HM08orf06014 | 3 | 17 | 1.138578 | ACT domain-containing protein | |
| SB48_HM08orf06015 | 2 | 14 | -1.182538 | hypothetical protein | |
| SB48_HM08orf06016 | 2 | 16 | -4.666302 | hypothetical protein | |
| SB48_HM08orf06018 | 2 | 22 | -5.390466 | alkylhydroperoxidase | |
| SB48_HM08orf06020 | 2 | 25 | -6.326733 | class I and II aminotransferase | |
| SB48_HM08orf06022 | 5 | 30 | -7.715207 | hypothetical protein | |
| SB48_HM08orf06026 | 5 | 31 | -7.869953 | hypothetical protein | |
| SB48_HM08orf06028 | 5 | 30 | -8.060015 | hypothetical protein | |
| SB48_HM08orf06029 | 2 | 26 | -5.013924 | hypothetical protein | |
| SB48_HM08orf06030 | -2 | 15 | -1.309378 | hypothetical protein | |
| SB48_HM08orf06031 | -2 | 16 | -1.021021 | transposase IS4 family protein | |
| SB48_HM08orf06032 | -2 | 14 | 0.539426 | hypothetical protein | |
| SB48_HM08orf06033 | 0 | 13 | 4.084466 | hypothetical protein | |
| SB48_HM08orf06034 | 1 | 13 | 4.926541 | sugar epimerase | |
| SB48_HM08orf06038 | 1 | 14 | 4.766462 | phosphomevalonate kinase | |
| SB48_HM08orf06040 | 2 | 17 | 4.023781 | hypothetical protein | |
| SB48_HM08orf06041 | 4 | 16 | 4.854802 | hypothetical protein | |
| SB48_HM08orf06044 | 3 | 17 | 5.108704 | diphosphomevalonate decarboxylase | |
| SB48_HM08orf06045 | 0 | 14 | 4.663192 | hypothetical protein | |
| SB48_HM08orf06047 | 0 | 13 | 3.613202 | mevalonate kinase | |
| SB48_HM08orf06050 | 0 | 14 | 3.248781 | hypothetical protein | |
| SB48_HM08orf06052 | 0 | 13 | 3.490605 | hypothetical protein | |
| SB48_HM08orf06054 | 0 | 12 | 2.575681 | hypothetical protein | |
| SB48_HM08orf06055 | 0 | 12 | 2.404415 | glucosamine--fructose-6-phosphate | |
| SB48_HM08orf06056 | 1 | 14 | 1.609533 | cation transporter | |
| SB48_HM08orf06059 | 0 | 15 | 1.528647 | NERD nuclease | |
| SB48_HM08orf06061 | -1 | 16 | 1.069114 | membrane protein | |
| SB48_HM08orf06065 | -2 | 19 | -0.499262 | hypothetical protein | |
| SB48_HM08orf06064 | -1 | 17 | 2.543380 | hypothetical protein | |
| SB48_HM08orf06066 | -3 | 14 | 3.513215 | hypothetical protein | |
| SB48_HM08orf06067 | -2 | 13 | 3.630388 | diguanylate cyclase | |
| SB48_HM08orf06070 | -2 | 15 | 4.804755 | hypothetical protein | |
| SB48_HM08orf06071 | -2 | 13 | 4.807754 | hypothetical protein | |
| SB48_HM08orf06072 | -2 | 14 | 5.206340 | AMP-dependent synthetase | |
| SB48_HM08orf06074 | 1 | 18 | 5.278364 | glycerol dehydrogenase | |
| SB48_HM08orf06077 | 1 | 17 | 6.355818 | YbaK/prolyl-tRNA synthetase associated | |
| SB48_HM08orf06078 | 1 | 16 | 5.817319 | hypothetical protein | |
| SB48_HM08orf06079 | 1 | 14 | 4.648389 | siroheme synthase | |
| SB48_HM08orf06081 | 0 | 17 | 3.591760 | hypothetical protein | |
| SB48_HM08orf06080 | -2 | 14 | 3.337903 | hypothetical protein | |
| SB48_HM08orf06084 | -2 | 14 | 2.951471 | cobalamin biosynthesis protein CbiX | |
| SB48_HM08orf06085 | -3 | 14 | 1.272086 | uroporphyrin-III C-methyltransferase | |
| SB48_HM08orf06086 | -4 | 17 | 0.079881 | hypothetical protein | |
| SB48_HM08orf06087 | -2 | 17 | 0.833708 | phosphoadenosine phosphosulfate reductase | |
| SB48_HM08orf06088 | 3 | 19 | 0.524766 | peptidase G2 | |
| SB48_HM08orf06090 | 2 | 20 | 1.047388 | hypothetical protein | |
| SB48_HM08orf06093 | 1 | 21 | 3.263092 | hypothetical protein | |
| SB48_HM08orf06095 | 0 | 19 | 2.730129 | hypothetical protein | |
| SB48_HM08orf06096 | 0 | 18 | 3.125395 | hypothetical protein | |
| SB48_HM08orf06097 | 0 | 18 | 3.379144 | hypothetical protein | |
| SB48_HM08orf06099 | 0 | 19 | 3.024965 | succinate-semialdehyde dehdyrogenase | |
| SB48_HM08orf06100 | 1 | 22 | 3.160464 | aminoglycoside phosphotransferase | |
| SB48_HM08orf06102 | 1 | 15 | 2.913986 | thioesterase | |
| SB48_HM08orf06103 | 0 | 16 | 3.477629 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06034 | NUCEPIMERASE | 28 | 0.023 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06047 | FLGPRINGFLGI | 30 | 0.011 | Flagellar P-ring protein signature. | |
>FLGPRINGFLGI#Flagellar P-ring protein signature. | |||||
| 62 | SB48_HM08orf06196 | SB48_HM08orf06283 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf06196 | 2 | 17 | -3.530934 | hypothetical protein | |
| SB48_HM08orf06197 | 2 | 16 | -3.319291 | hypothetical protein | |
| SB48_HM08orf06201 | -1 | 14 | 1.004754 | D-isomer specific 2-hydroxyacid dehydrogenase | |
| SB48_HM08orf06202 | 2 | 17 | -0.587161 | hypothetical protein | |
| SB48_HM08orf06203 | 2 | 16 | -0.785706 | hypothetical protein | |
| SB48_HM08orf06204 | 3 | 23 | -3.854918 | selenium metabolism protein YedF | |
| SB48_HM08orf06205 | 3 | 25 | -4.123819 | hypothetical protein | |
| SB48_HM08orf06207 | 3 | 26 | -4.958621 | acetyl-CoA acetyltransferase | |
| SB48_HM08orf06208 | 7 | 32 | -7.705331 | hypothetical protein | |
| SB48_HM08orf06209 | 6 | 36 | -10.016129 | hypothetical protein | |
| SB48_HM08orf06210 | 7 | 36 | -10.587699 | transposase family protein | |
| SB48_HM08orf06211 | 7 | 36 | -10.238981 | hypothetical protein | |
| SB48_HM08orf06212 | 7 | 36 | -10.256170 | abortive infection protein | |
| SB48_HM08orf06214 | 8 | 36 | -10.318493 | hypothetical protein | |
| SB48_HM08orf06215 | 10 | 39 | -11.525485 | GCN5-like N-acetyltransferase | |
| SB48_HM08orf06216 | 10 | 38 | -11.728899 | major facilitator superfamily protein | |
| SB48_HM08orf06217 | 9 | 42 | -12.337849 | hypothetical protein | |
| SB48_HM08orf06218 | 6 | 32 | -12.553196 | hypothetical protein | |
| SB48_HM08orf06219 | 6 | 32 | -11.988450 | hypothetical protein | |
| SB48_HM08orf06220 | 5 | 33 | -12.007091 | hypothetical protein | |
| SB48_HM08orf06221 | 5 | 33 | -11.847602 | NUDIX hydrolase | |
| SB48_HM08orf06223 | 5 | 36 | -12.066900 | hypothetical protein | |
| SB48_HM08orf06224 | 4 | 34 | -11.548449 | transposase IS4 family protein | |
| SB48_HM08orf06225 | 4 | 21 | -5.736390 | GCN5-like N-acetyltransferase | |
| SB48_HM08orf06226 | 4 | 21 | -5.794970 | hypothetical protein | |
| SB48_HM08orf06227 | 2 | 16 | -2.343291 | hypothetical protein | |
| SB48_HM08orf06228 | 2 | 17 | -2.182787 | GCN5-like N-acetyltransferase | |
| SB48_HM08orf06229 | 2 | 16 | -1.406241 | hypothetical protein | |
| SB48_HM08orf06231 | 2 | 18 | -1.148595 | major facilitator superfamily protein | |
| SB48_HM08orf06232 | 0 | 21 | -2.238965 | hypothetical protein | |
| SB48_HM08orf06234 | 1 | 22 | -2.272874 | luciferase family oxidoreductase, group 1 | |
| SB48_HM08orf06235 | 3 | 25 | -4.590555 | hypothetical protein | |
| SB48_HM08orf06236 | 3 | 25 | -4.720409 | ArsR family transcriptional regulator | |
| SB48_HM08orf06237 | 2 | 25 | -4.338567 | hypothetical protein | |
| SB48_HM08orf06238 | 1 | 23 | -4.126391 | ATP-grasp fold domain-containing protein | |
| SB48_HM08orf06241 | 1 | 25 | -3.690534 | MFS transporter | |
| SB48_HM08orf06242 | 1 | 22 | -2.854513 | hypothetical protein | |
| SB48_HM08orf06244 | 0 | 21 | -0.463039 | hypothetical protein | |
| SB48_HM08orf06246 | -1 | 22 | 0.065076 | TetR family transcriptional regulator | |
| SB48_HM08orf06245 | 0 | 18 | -1.295942 | hypothetical protein | |
| SB48_HM08orf06247 | 0 | 19 | -1.670473 | isochorismatase hydrolase | |
| SB48_HM08orf06249 | 1 | 20 | -2.037362 | hypothetical protein | |
| SB48_HM08orf06250 | 1 | 20 | -2.584176 | major facilitator superfamily protein | |
| SB48_HM08orf06252 | 1 | 20 | -3.862073 | hypothetical protein | |
| SB48_HM08orf06253 | 2 | 20 | -5.334124 | methyl-accepting chemotaxis sensory transducer | |
| SB48_HM08orf06255 | 3 | 21 | -6.037796 | hypothetical protein | |
| SB48_HM08orf06256 | 3 | 21 | -6.189465 | PadR-like family transcriptional regulator | |
| SB48_HM08orf06257 | 3 | 24 | -6.424074 | hypothetical protein | |
| SB48_HM08orf06258 | 4 | 28 | -4.994532 | hypothetical protein | |
| SB48_HM08orf06260 | 4 | 31 | -5.310742 | methyl-accepting chemotaxis sensory transducer | |
| SB48_HM08orf06261 | 5 | 33 | -6.209980 | Silent information regulator protein Sir2 | |
| SB48_HM08orf06262 | 5 | 35 | -7.127168 | hypothetical protein | |
| SB48_HM08orf06263 | 5 | 29 | -6.156467 | LysR family transcriptional regulator | |
| SB48_HM08orf06264 | 5 | 27 | -6.235252 | MFS transporter | |
| SB48_HM08orf06265 | 6 | 30 | -9.773159 | hypothetical protein | |
| SB48_HM08orf06266 | 5 | 31 | -10.192387 | transposase IS4 family protein | |
| SB48_HM08orf06267 | 5 | 31 | -10.192387 | hypothetical protein | |
| SB48_HM08orf06269 | 6 | 32 | -10.101784 | transposase IS4 family protein | |
| SB48_HM08orf06270 | 8 | 35 | -12.385056 | hypothetical protein | |
| SB48_HM08orf06271 | 7 | 33 | -10.662141 | major facilitator superfamily protein | |
| SB48_HM08orf06273 | 4 | 28 | -8.496440 | hypothetical protein | |
| SB48_HM08orf06274 | 4 | 24 | -7.543328 | transposase IS4 family protein | |
| SB48_HM08orf06275 | 3 | 25 | -6.739243 | transposase family protein | |
| SB48_HM08orf06276 | 2 | 25 | -7.206324 | hypothetical protein | |
| SB48_HM08orf06278 | 2 | 25 | -6.951877 | oxidoreductase | |
| SB48_HM08orf06279 | 3 | 26 | -8.194659 | hypothetical protein | |
| SB48_HM08orf06281 | -1 | 17 | -4.348654 | acyl-ACP thioesterase | |
| SB48_HM08orf06283 | -1 | 19 | -3.522999 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06215 | SACTRNSFRASE | 48 | 1e-09 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06216 | TCRTETA | 53 | 1e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06241 | TCRTETA | 48 | 3e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06246 | HTHTETR | 50 | 6e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06247 | ISCHRISMTASE | 47 | 1e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06250 | TCRTETB | 70 | 2e-15 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06264 | TCRTETB | 58 | 2e-11 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06276 | ANTHRAXTOXNA | 25 | 0.019 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 63 | SB48_HM08orf06298 | SB48_HM08orf06363 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf06298 | 3 | 20 | -2.083991 | Sporulation stage 0, Spo0E-like regulatory | |
| SB48_HM08orf06299 | 4 | 25 | -4.657630 | hypothetical protein | |
| SB48_HM08orf06301 | 4 | 28 | -4.301006 | arginase | |
| SB48_HM08orf06302 | 6 | 30 | -4.935321 | lyzozyme M1 | |
| SB48_HM08orf06303 | 5 | 31 | -5.132538 | hypothetical protein | |
| SB48_HM08orf06304 | 3 | 28 | -4.093065 | hypothetical protein | |
| SB48_HM08orf06305 | 3 | 28 | -3.725444 | hypothetical protein | |
| SB48_HM08orf06306 | 3 | 26 | -2.577933 | hypothetical protein | |
| SB48_HM08orf06307 | 3 | 25 | -2.182094 | hypothetical protein | |
| SB48_HM08orf06308 | 3 | 25 | -2.212507 | hypothetical protein | |
| SB48_HM08orf06312 | 3 | 26 | -2.998556 | hypothetical protein | |
| SB48_HM08orf06313 | 6 | 26 | -3.503465 | hypothetical protein | |
| SB48_HM08orf06315 | 5 | 26 | -3.617711 | hypothetical protein | |
| SB48_HM08orf06316 | 6 | 26 | -3.515408 | hypothetical protein | |
| SB48_HM08orf06317 | 3 | 20 | -2.542616 | hypothetical protein | |
| SB48_HM08orf06318 | 4 | 21 | -2.479031 | hypothetical protein | |
| SB48_HM08orf06319 | 4 | 21 | -1.518654 | hypothetical protein | |
| SB48_HM08orf06320 | 3 | 20 | -0.621309 | hypothetical protein | |
| SB48_HM08orf06321 | 3 | 19 | 0.041496 | hypothetical protein | |
| SB48_HM08orf06322 | 2 | 20 | -0.146193 | hypothetical protein | |
| SB48_HM08orf06323 | 3 | 21 | -0.240963 | hypothetical protein | |
| SB48_HM08orf06324 | 2 | 20 | -0.567469 | hypothetical protein | |
| SB48_HM08orf06326 | 2 | 21 | -0.239741 | hypothetical protein | |
| SB48_HM08orf06328 | 1 | 22 | -1.518225 | hypothetical protein | |
| SB48_HM08orf06329 | 4 | 33 | -6.525638 | hypothetical protein | |
| SB48_HM08orf06330 | 4 | 34 | -7.723435 | hypothetical protein | |
| SB48_HM08orf06331 | 4 | 34 | -7.907810 | hypothetical protein | |
| SB48_HM08orf06332 | 2 | 32 | -6.771387 | hypothetical protein | |
| SB48_HM08orf06333 | 3 | 31 | -7.180994 | hypothetical protein | |
| SB48_HM08orf06334 | 3 | 31 | -6.445407 | hypothetical protein | |
| SB48_HM08orf06335 | 3 | 31 | -5.811619 | methyltransferase | |
| SB48_HM08orf06336 | 4 | 30 | -5.392621 | hypothetical protein | |
| SB48_HM08orf06337 | 5 | 32 | -4.600351 | type I restriction endonuclease subunit M | |
| SB48_HM08orf06338 | 5 | 33 | -5.135168 | hypothetical protein | |
| SB48_HM08orf06339 | 5 | 25 | -3.541382 | hypothetical protein | |
| SB48_HM08orf06341 | 4 | 23 | -4.622253 | DUTPase | |
| SB48_HM08orf06340 | 5 | 25 | -4.026026 | hypothetical protein | |
| SB48_HM08orf06342 | 4 | 25 | -3.469929 | hypothetical protein | |
| SB48_HM08orf06343 | 4 | 25 | -3.854203 | hypothetical protein | |
| SB48_HM08orf06344 | 4 | 25 | -4.002904 | DNA helicase | |
| SB48_HM08orf06345 | 4 | 28 | -5.077815 | hypothetical protein | |
| SB48_HM08orf06347 | 5 | 28 | -4.124076 | hypothetical protein | |
| SB48_HM08orf06348 | 3 | 28 | -5.239819 | hypothetical protein | |
| SB48_HM08orf06349 | 7 | 30 | -8.635100 | hypothetical protein | |
| SB48_HM08orf06350 | 8 | 24 | -8.520687 | hypothetical protein | |
| SB48_HM08orf06351 | 4 | 26 | -6.542442 | hypothetical protein | |
| SB48_HM08orf06352 | 3 | 27 | -6.774678 | hypothetical protein | |
| SB48_HM08orf06353 | 3 | 25 | -6.439898 | hypothetical protein | |
| SB48_HM08orf06354 | 3 | 28 | -6.516641 | hypothetical protein | |
| SB48_HM08orf06355 | 3 | 29 | -7.241395 | hypothetical protein | |
| SB48_HM08orf06357 | 3 | 32 | -7.786827 | phage antirepressor protein | |
| SB48_HM08orf06358 | 5 | 38 | -8.270334 | thetical protein | |
| SB48_HM08orf06359 | 4 | 32 | -7.686578 | hypothetical protein | |
| SB48_HM08orf06360 | 4 | 29 | -7.333681 | hypothetical protein | |
| SB48_HM08orf06362 | 4 | 25 | -6.205994 | hypothetical protein | |
| SB48_HM08orf06363 | 2 | 14 | -3.118414 | membrane protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06326 | UREASE | 31 | 0.021 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06347 | TONBPROTEIN | 30 | 0.013 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. | |||||
| 64 | SB48_HM08orf06376 | SB48_HM08orf06400 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf06376 | -4 | 14 | 3.809729 | hypothetical protein | |
| SB48_HM08orf06377 | -4 | 15 | 3.700014 | oxidoreductase | |
| SB48_HM08orf06378 | -3 | 16 | 3.712783 | hypothetical protein | |
| SB48_HM08orf06379 | -4 | 16 | 3.437517 | ATP-binding protein | |
| SB48_HM08orf06381 | -2 | 16 | 2.604066 | cysteine ABC transporter ATP-binding protein | |
| SB48_HM08orf06382 | -2 | 17 | 1.335884 | hypothetical protein | |
| SB48_HM08orf06384 | 0 | 16 | 1.606047 | cytochrome d ubiquinol oxidase subunit II | |
| SB48_HM08orf06385 | 1 | 15 | 1.105473 | cytochrome bd ubiquinol oxidase subunit I | |
| SB48_HM08orf06387 | 2 | 13 | 1.868931 | hypothetical protein | |
| SB48_HM08orf06388 | 1 | 14 | 2.070618 | polysaccharide deacetylase | |
| SB48_HM08orf06392 | 1 | 18 | 2.729109 | hypothetical protein | |
| SB48_HM08orf06393 | 0 | 18 | 3.668321 | KinB-signaling pathway activation protein | |
| SB48_HM08orf06394 | -1 | 17 | 3.144862 | spore germination protein GerD | |
| SB48_HM08orf06397 | -1 | 19 | 4.038411 | ParA/MinD ATPase-like protein | |
| SB48_HM08orf06398 | -1 | 18 | 3.839358 | N-acetylmuramoyl-L-alanine amidase CwlD | |
| SB48_HM08orf06399 | 0 | 17 | 3.677236 | hypothetical protein | |
| SB48_HM08orf06400 | -1 | 14 | 3.129171 | amino acid permease |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06377 | DHBDHDRGNASE | 136 | 9e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| 65 | SB48_HM08orf06493 | SB48_HM08orf06531 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf06493 | -1 | 16 | 3.225922 | glutamyl-tRNA synthetase | |
| SB48_HM08orf06495 | -3 | 15 | 1.719224 | glutamyl-tRNA synthetase | |
| SB48_HM08orf06496 | -4 | 20 | 2.010731 | hypothetical protein | |
| SB48_HM08orf06498 | -3 | 18 | 3.039117 | hypothetical protein | |
| SB48_HM08orf06501 | -1 | 15 | 3.362730 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate | |
| SB48_HM08orf06502 | -2 | 14 | 2.167356 | 2-C-methyl-D-erythritol 4-phosphate | |
| SB48_HM08orf06503 | -2 | 14 | 1.780317 | twitching motility protein PilT | |
| SB48_HM08orf06504 | -1 | 14 | 2.194465 | hypothetical protein | |
| SB48_HM08orf06506 | -2 | 14 | 2.280462 | DNA repair protein RadA | |
| SB48_HM08orf06507 | -1 | 14 | -0.019508 | ATPase AAA | |
| SB48_HM08orf06508 | 0 | 19 | -4.490627 | ATP:guanido phosphotransferase | |
| SB48_HM08orf06510 | 1 | 18 | -4.438001 | UvrB/UvrC protein | |
| SB48_HM08orf06511 | 2 | 19 | -6.230820 | transcriptional repressor CtsR | |
| SB48_HM08orf06512 | -2 | 20 | -3.889757 | hypothetical protein | |
| SB48_HM08orf06513 | -1 | 20 | -3.580201 | hypothetical protein | |
| SB48_HM08orf06514 | -3 | 12 | 0.485130 | hypothetical protein | |
| SB48_HM08orf06521 | -3 | 12 | 1.761296 | **pro-sigmaK processing inhibitor BofA | |
| SB48_HM08orf06523 | -1 | 14 | -3.507826 | hypothetical protein | |
| SB48_HM08orf06524 | -2 | 15 | -3.373211 | recombination protein RecR | |
| SB48_HM08orf06526 | -1 | 15 | -4.232170 | hypothetical protein | |
| SB48_HM08orf06528 | 1 | 19 | -4.904044 | DNA polymerase III subunits gamma and tau | |
| SB48_HM08orf06530 | 4 | 26 | -7.151894 | CMP/dCMP deaminase zinc-binding protein | |
| SB48_HM08orf06531 | 5 | 29 | -8.666587 | transposase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06507 | HTHFIS | 36 | 4e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06526 | 60KDINNERMP | 26 | 0.032 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| 66 | SB48_HM08orf06617 | SB48_HM08orf06622 | Y ![]() | N | N | Genomic Island |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf06617 | -1 | 15 | -3.121878 | hypothetical protein | |
| SB48_HM08orf06618 | 0 | 15 | -3.738315 | ribose-phosphate pyrophosphokinase | |
| SB48_HM08orf06619 | 1 | 16 | -5.495632 | UDP-N-acetylglucosamine pyrophosphorylase | |
| SB48_HM08orf06620 | 4 | 26 | -10.353612 | hypothetical protein | |
| SB48_HM08orf06621 | 1 | 23 | -7.863855 | peptide ABC transporter ATP-binding protein | |
| SB48_HM08orf06622 | 0 | 18 | -4.362641 | hypothetical protein |
| 67 | SB48_HM08orf00171 | SB48_HM08orf00175 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00171 | -2 | 12 | 0.752227 | metal ABC transporter substrate-binding protein | |
| SB48_HM08orf00172 | -1 | 12 | 1.652250 | sensor histidine kinase | |
| SB48_HM08orf00173 | -1 | 12 | 1.142855 | LytTR family two component transcriptional | |
| SB48_HM08orf00174 | -1 | 14 | 1.246926 | carbon starvation protein CstA | |
| SB48_HM08orf00175 | 1 | 16 | -2.113187 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00171 | adhesinb | 33 | 0.001 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00172 | PF06580 | 219 | 5e-68 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00173 | HTHFIS | 67 | 5e-15 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00175 | ANTHRAXTOXNA | 27 | 0.001 | Anthrax toxin LF subunit signature. | |
>ANTHRAXTOXNA#Anthrax toxin LF subunit signature. | |||||
| 68 | SB48_HM08orf00276 | SB48_HM08orf00283 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00276 | 1 | 15 | -4.884457 | TetR family transcriptional regulator | |
| SB48_HM08orf00279 | 2 | 15 | -4.960520 | methylmalonyl-CoA mutase | |
| SB48_HM08orf00281 | 4 | 20 | -8.255909 | hypothetical protein | |
| SB48_HM08orf00283 | 1 | 12 | -2.770150 | ABC transporter-like protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00276 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00279 | 60KDINNERMP | 31 | 0.031 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00281 | PF03309 | 31 | 0.021 | Bvg accessory factor | |
>PF03309#Bvg accessory factor | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00283 | PF05272 | 35 | 1e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| 69 | SB48_HM08orf00362 | SB48_HM08orf00370 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00362 | -2 | 16 | 0.069887 | peptidase M23 | |
| SB48_HM08orf00363 | -2 | 17 | 1.244756 | hypothetical protein | |
| SB48_HM08orf00364 | -2 | 17 | 1.686474 | sporulation transcriptional regulator SpoIIID | |
| SB48_HM08orf00365 | -3 | 14 | 1.907480 | hypothetical protein | |
| SB48_HM08orf00366 | -3 | 14 | 2.546702 | cell shape determining protein, MreB/Mrl family | |
| SB48_HM08orf00369 | -2 | 20 | 3.126029 | flagellar basal-body rod protein FlgF | |
| SB48_HM08orf00370 | 1 | 22 | 1.626187 | flagellar hook-basal body protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00362 | RTXTOXIND | 39 | 2e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00366 | SHAPEPROTEIN | 476 | e-172 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00369 | FLGHOOKAP1 | 37 | 6e-05 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00370 | FLGHOOKAP1 | 30 | 0.008 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 70 | SB48_HM08orf00580 | SB48_HM08orf00589 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00580 | -2 | 13 | -0.334136 | ABC-2 type transporter | |
| SB48_HM08orf00581 | -2 | 13 | 0.693958 | ABC-2 type transporter | |
| SB48_HM08orf00583 | -2 | 13 | 0.938869 | ABC transporter-like protein | |
| SB48_HM08orf00585 | -1 | 15 | 1.276410 | signal transduction histidine kinase | |
| SB48_HM08orf00586 | -3 | 15 | 0.752491 | two component LuxR family transcriptional | |
| SB48_HM08orf00589 | -3 | 17 | 1.270607 | major facilitator superfamily protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00580 | ABC2TRNSPORT | 56 | 6e-11 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00581 | ABC2TRNSPORT | 33 | 0.001 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00585 | PF06580 | 31 | 0.005 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00586 | HTHFIS | 81 | 3e-19 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00589 | TCRTETA | 63 | 4e-13 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| 71 | SB48_HM08orf00913 | SB48_HM08orf00925 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00913 | 7 | 26 | -3.675248 | nuclear export factor GLE1 | |
| SB48_HM08orf00915 | 8 | 26 | -5.060898 | hypothetical protein | |
| SB48_HM08orf00916 | 10 | 28 | -5.780251 | hypothetical protein | |
| SB48_HM08orf00917 | 7 | 27 | -4.084444 | hypothetical protein | |
| SB48_HM08orf00918 | 4 | 25 | -2.628903 | pyridoxamine 5-phosphate oxidase-like | |
| SB48_HM08orf00922 | 4 | 25 | -2.158137 | hypothetical protein | |
| SB48_HM08orf00923 | 2 | 21 | -2.991523 | hypothetical protein | |
| SB48_HM08orf00925 | 1 | 23 | -3.009710 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00913 | adhesinb | 31 | 0.005 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00916 | FLGFLIH | 36 | 1e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00917 | FLGFLIH | 34 | 4e-05 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00925 | FLGFLIH | 27 | 0.002 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 72 | SB48_HM08orf00934 | SB48_HM08orf00940 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf00934 | -2 | 18 | -0.582548 | periplasmic binding protein/LacI transcriptional | |
| SB48_HM08orf00936 | -2 | 16 | 0.314375 | gluconate:proton symporter | |
| SB48_HM08orf00937 | -3 | 17 | 0.067077 | glycerate kinase | |
| SB48_HM08orf00940 | -2 | 19 | -3.037016 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00934 | SUBTILISIN | 31 | 0.007 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00936 | RTXTOXINA | 30 | 0.027 | Gram-negative bacterial RTX toxin determinant A family... | |
>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00937 | TYPE4SSCAGA | 31 | 0.012 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf00940 | HTHFIS | 36 | 2e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 73 | SB48_HM08orf01037 | SB48_HM08orf01057 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01037 | 0 | 25 | 5.667260 | nitrate reductase | |
| SB48_HM08orf01040 | -1 | 21 | 4.614188 | nitrate reductase subunit alpha | |
| SB48_HM08orf01041 | -1 | 16 | 1.249772 | hypothetical protein | |
| SB48_HM08orf01042 | -1 | 13 | 1.560842 | hypothetical protein | |
| SB48_HM08orf01044 | -1 | 13 | 1.668631 | hypothetical protein | |
| SB48_HM08orf01046 | -1 | 14 | 1.138957 | ABC transporter-like protein | |
| SB48_HM08orf01048 | 0 | 14 | 0.238012 | ABC transporter | |
| SB48_HM08orf01049 | -2 | 16 | 0.314873 | TetR family transcriptional regulator | |
| SB48_HM08orf01050 | -1 | 17 | 0.018084 | amino acid permease | |
| SB48_HM08orf01052 | -2 | 18 | 1.895088 | hypothetical protein | |
| SB48_HM08orf01053 | -3 | 13 | 1.195641 | hypothetical protein | |
| SB48_HM08orf01055 | -3 | 12 | 1.452595 | type III restriction protein res subunit | |
| SB48_HM08orf01057 | -2 | 11 | 1.165945 | ATPase AAA |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01037 | TACYTOLYSIN | 30 | 0.025 | Bacterial thiol-activated pore-forming cytolysin sig... | |
>TACYTOLYSIN#Bacterial thiol-activated pore-forming cytolysin | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01046 | PF05272 | 30 | 0.010 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01048 | ABC2TRNSPORT | 54 | 2e-10 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01049 | HTHTETR | 80 | 8e-21 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01057 | HTHFIS | 377 | e-129 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 74 | SB48_HM08orf01234 | SB48_HM08orf01250 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf01234 | -2 | 14 | 1.287245 | methyltransferase | |
| SB48_HM08orf01237 | 0 | 14 | 2.255005 | quorum-sensing autoinducer 2 (AI-2), LuxS | |
| SB48_HM08orf01239 | 0 | 13 | 2.734179 | pyridoxal-5-phosphate-dependent protein subunit | |
| SB48_HM08orf01240 | -1 | 14 | 1.539553 | Cys/Met metabolism pyridoxal-phosphate-dependent | |
| SB48_HM08orf01241 | -1 | 12 | 1.035252 | hypothetical protein | |
| SB48_HM08orf01243 | 0 | 11 | 1.139486 | membrane integrity integral inner membrane | |
| SB48_HM08orf01246 | 0 | 12 | 1.410178 | hypothetical protein | |
| SB48_HM08orf01250 | -2 | 13 | 0.479592 | MreB/Mrl family cell shape determining protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01234 | NUCEPIMERASE | 30 | 0.007 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01237 | LUXSPROTEIN | 197 | 8e-68 | Bacterial autoinducer-2 (AI-2) production protein Lu... | |
>LUXSPROTEIN#Bacterial autoinducer-2 (AI-2) production protein LuxS | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01246 | RTXTOXIND | 34 | 0.001 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf01250 | SHAPEPROTEIN | 433 | e-155 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
| 75 | SB48_HM08orf02542 | SB48_HM08orf02553 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02542 | -1 | 13 | 2.710069 | type II secretion system protein E | |
| SB48_HM08orf02544 | -1 | 14 | 2.845506 | twitching motility protein | |
| SB48_HM08orf02545 | -1 | 14 | 2.670501 | type II secretion system F domain-containing | |
| SB48_HM08orf02546 | 0 | 13 | 2.832317 | hypothetical protein | |
| SB48_HM08orf02547 | 1 | 15 | 4.144301 | hypothetical protein | |
| SB48_HM08orf02551 | 2 | 16 | 4.009446 | fimbrial assembly family protein | |
| SB48_HM08orf02552 | -1 | 16 | 3.995778 | hypothetical protein | |
| SB48_HM08orf02553 | -1 | 15 | 2.526321 | peptidase A24A domain-containing protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02542 | SECA | 29 | 0.042 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02545 | BCTERIALGSPF | 304 | e-103 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02546 | BCTERIALGSPG | 41 | 2e-07 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02551 | cloacin | 30 | 0.014 | Cloacin signature. | |
>cloacin#Cloacin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02553 | PREPILNPTASE | 190 | 4e-62 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family | |||||
| 76 | SB48_HM08orf02956 | SB48_HM08orf02971 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf02956 | -1 | 13 | 1.078496 | arginine repressor ArgR | |
| SB48_HM08orf02957 | 0 | 14 | 1.918458 | DNA repair protein RecN | |
| SB48_HM08orf02958 | 0 | 15 | 1.957522 | stage IV sporulation protein B | |
| SB48_HM08orf02960 | -1 | 13 | 1.943603 | sporulation transcriptional activator Spo0A | |
| SB48_HM08orf02962 | 0 | 14 | 3.064679 | glycerophosphoryl diester phosphodiesterase | |
| SB48_HM08orf02965 | 1 | 14 | 3.954501 | hypothetical protein | |
| SB48_HM08orf02969 | 1 | 15 | 4.178110 | sigma54 specific transcriptional regulator | |
| SB48_HM08orf02971 | 1 | 17 | 4.523881 | Fis family transcriptional regulator |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02956 | ARGREPRESSOR | 206 | 1e-71 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02960 | HTHFIS | 85 | 5e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02969 | HTHFIS | 274 | 7e-88 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf02971 | HTHFIS | 68 | 6e-17 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 77 | SB48_HM08orf03542 | SB48_HM08orf03550 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf03542 | 0 | 18 | -4.267261 | major facilitator superfamily protein | |
| SB48_HM08orf03543 | 1 | 24 | -6.269497 | TetR family transcriptional regulator | |
| SB48_HM08orf03546 | 1 | 27 | -7.905785 | hypothetical protein | |
| SB48_HM08orf03547 | 1 | 27 | -7.840006 | N-acetyltransferase GCN5 | |
| SB48_HM08orf03550 | 0 | 24 | -5.219635 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03542 | TCRTETA | 46 | 1e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03543 | HTHTETR | 80 | 1e-20 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03547 | SACTRNSFRASE | 28 | 0.018 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf03550 | SECFTRNLCASE | 29 | 0.003 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
| 78 | SB48_HM08orf04041 | SB48_HM08orf04085 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04041 | -1 | 10 | 1.915254 | CheA signal transduction histidine kinase | |
| SB48_HM08orf04042 | -1 | 12 | 2.279019 | CheB methylesterase | |
| SB48_HM08orf04045 | -2 | 13 | 1.872465 | cobyrinic acid ac-diamide synthase | |
| SB48_HM08orf04046 | -2 | 15 | 1.674394 | flagellar biosynthesis regulator FlhF | |
| SB48_HM08orf04048 | -3 | 16 | 2.051288 | flagellar biosynthesis protein FlhA | |
| SB48_HM08orf04049 | -1 | 14 | 0.776587 | flagellar biosynthesis protein FlhB | |
| SB48_HM08orf04051 | -2 | 14 | 0.816617 | flagellar biosynthesis protein FliR | |
| SB48_HM08orf04052 | 1 | 15 | 0.303193 | flagellar biosynthetic protein FliQ | |
| SB48_HM08orf04053 | 1 | 14 | -0.504226 | flagellar biosynthetic protein FliP | |
| SB48_HM08orf04055 | 1 | 16 | -0.215953 | flagella biosynthesis protein FliZ | |
| SB48_HM08orf04056 | 2 | 14 | -0.289294 | response regulator receiver protein | |
| SB48_HM08orf04058 | 2 | 15 | 0.210449 | CheC, inhibitor of MCP methylation / FliN fusion | |
| SB48_HM08orf04059 | 1 | 17 | -0.586115 | flagellar motor switch protein FliM | |
| SB48_HM08orf04061 | 2 | 13 | 2.617178 | flagellar basal body-associated protein FliL | |
| SB48_HM08orf04062 | 3 | 14 | 3.001944 | hypothetical protein | |
| SB48_HM08orf04063 | 3 | 15 | 2.214849 | flagellar hook-basal body protein | |
| SB48_HM08orf04065 | 1 | 15 | 2.687117 | hypothetical protein | |
| SB48_HM08orf04068 | 1 | 13 | 2.313313 | flagellar hook capping protein | |
| SB48_HM08orf04070 | -1 | 11 | 0.812015 | flagellar hook-length control protein | |
| SB48_HM08orf04072 | -1 | 12 | -1.252921 | MgtE intracellular region | |
| SB48_HM08orf04074 | 0 | 10 | -0.666664 | flagellar export protein FliJ | |
| SB48_HM08orf04076 | 0 | 10 | -0.129171 | flagellar protein export ATPase FliI | |
| SB48_HM08orf04077 | 2 | 11 | -0.791386 | flagellar assembly protein FliH | |
| SB48_HM08orf04078 | 3 | 11 | -0.940792 | transposase IS4 family protein | |
| SB48_HM08orf04079 | 3 | 11 | -0.940792 | flagellar motor switch protein FliG | |
| SB48_HM08orf04082 | 3 | 11 | -1.378400 | flagellar M-ring protein FliF | |
| SB48_HM08orf04084 | 3 | 12 | -1.380473 | hypothetical protein | |
| SB48_HM08orf04085 | 1 | 13 | -1.041308 | flagellar basal-body rod protein FlgC |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04041 | PF06580 | 41 | 1e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04049 | TYPE3IMSPROT | 376 | e-132 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04051 | TYPE3IMRPROT | 152 | 1e-47 | Type III secretion system inner membrane R protein ... | |
>TYPE3IMRPROT#Type III secretion system inner membrane R protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04052 | TYPE3IMQPROT | 65 | 8e-18 | Type III secretion system inner membrane Q protein ... | |
>TYPE3IMQPROT#Type III secretion system inner membrane Q protein | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04053 | FLGBIOSNFLIP | 264 | 6e-92 | Escherichia coli: Flagellar biosynthetic protein Fl... | |
>FLGBIOSNFLIP#Escherichia coli: Flagellar biosynthetic protein FliP | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04056 | HTHFIS | 102 | 4e-29 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04058 | FLGMOTORFLIN | 121 | 9e-36 | Flagellar motor switch protein FliN signature. | |
>FLGMOTORFLIN#Flagellar motor switch protein FliN signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04059 | FLGMOTORFLIM | 345 | e-120 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04063 | FLGHOOKAP1 | 46 | 5e-08 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04065 | MYCMG045 | 30 | 0.002 | Hypothetical mycoplasma lipoprotein (MG045) signature. | |
>MYCMG045#Hypothetical mycoplasma lipoprotein (MG045) signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04072 | RTXTOXIND | 31 | 0.005 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04074 | FLGFLIJ | 34 | 1e-04 | Flagellar FliJ protein signature. | |
>FLGFLIJ#Flagellar FliJ protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04077 | FLGFLIH | 36 | 1e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04079 | FLGMOTORFLIG | 383 | e-135 | Flagellar motor switch protein FliG signature. | |
>FLGMOTORFLIG#Flagellar motor switch protein FliG signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04082 | FLGMRINGFLIF | 306 | e-100 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04084 | FLGHOOKFLIE | 62 | 3e-16 | Flagellar hook-basal body complex protein FliE signa... | |
>FLGHOOKFLIE#Flagellar hook-basal body complex protein FliE | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04085 | FLGHOOKAP1 | 27 | 0.038 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 79 | SB48_HM08orf04138 | SB48_HM08orf04147 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04138 | 3 | 15 | 3.588702 | chromosome partitioning protein Smc | |
| SB48_HM08orf04139 | -2 | 14 | 3.546773 | ribonuclease III | |
| SB48_HM08orf04140 | -1 | 15 | 3.859171 | acyl carrier protein | |
| SB48_HM08orf04141 | 0 | 16 | 4.473353 | 3-ketoacyl-ACP reductase | |
| SB48_HM08orf04143 | -1 | 15 | 4.355364 | malonyl CoA-ACP transacylase | |
| SB48_HM08orf04144 | 0 | 15 | 3.881672 | phosphate acyltransferase | |
| SB48_HM08orf04145 | 0 | 16 | 4.068299 | DeoR family transcriptional regulator | |
| SB48_HM08orf04147 | 0 | 15 | 3.704720 | ATP-dependent DNA helicase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04138 | GPOSANCHOR | 59 | 8e-11 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04141 | DHBDHDRGNASE | 148 | 4e-46 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04145 | ARGREPRESSOR | 26 | 0.048 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04147 | SECA | 34 | 0.003 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| 80 | SB48_HM08orf04221 | SB48_HM08orf04226 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf04221 | 0 | 12 | 1.326304 | TetR family transcriptional regulator | |
| SB48_HM08orf04222 | 0 | 12 | 1.857988 | EmrB/QacA subfamily drug resistance transporter | |
| SB48_HM08orf04223 | 0 | 11 | 1.140980 | DeoR family transcriptional regulator | |
| SB48_HM08orf04224 | 2 | 17 | -0.029445 | 5-formyltetrahydrofolate cyclo-ligase | |
| SB48_HM08orf04225 | 1 | 17 | 1.892265 | hypothetical protein | |
| SB48_HM08orf04226 | 0 | 18 | 2.227396 | hypothetical protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04221 | HTHTETR | 70 | 3e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04222 | TCRTETB | 128 | 2e-34 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04223 | TCRTETB | 119 | 1e-31 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf04226 | FLGFLIH | 31 | 4e-04 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| 81 | SB48_HM08orf05119 | SB48_HM08orf05127 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05119 | 2 | 16 | -2.946250 | flagellin | |
| SB48_HM08orf05120 | -1 | 14 | -0.839603 | hypothetical protein | |
| SB48_HM08orf05121 | -2 | 17 | 1.637526 | hypothetical protein | |
| SB48_HM08orf05122 | -2 | 18 | 2.413050 | carbon storage regulator | |
| SB48_HM08orf05123 | -2 | 15 | 1.914836 | Flagellar assembly factor FliW | |
| SB48_HM08orf05125 | -2 | 14 | 2.529250 | flagellar hook-associated protein 3 | |
| SB48_HM08orf05127 | -1 | 14 | 4.263204 | flagellar hook-associated protein FlgK |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05119 | FLAGELLIN | 136 | 1e-37 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05120 | SECA | 58 | 5e-11 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05125 | FLAGELLIN | 72 | 2e-16 | Flagellin signature. | |
>FLAGELLIN#Flagellin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05127 | FLGHOOKAP1 | 195 | 1e-57 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
| 82 | SB48_HM08orf05591 | SB48_HM08orf05602 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05591 | -2 | 17 | -1.731415 | D-xylulose kinase | |
| SB48_HM08orf05592 | 0 | 18 | -0.990402 | sugar transporter | |
| SB48_HM08orf05594 | 0 | 14 | 1.666469 | alcohol dehydrogenase | |
| SB48_HM08orf05597 | 2 | 17 | 1.950536 | hypothetical protein | |
| SB48_HM08orf05599 | 2 | 17 | 1.840825 | hypothetical protein | |
| SB48_HM08orf05600 | 1 | 15 | 2.085354 | transposase | |
| SB48_HM08orf05602 | -1 | 20 | 1.392997 | Mg chelatase subunit ChlI |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05591 | BCTLIPOCALIN | 29 | 0.033 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05592 | TCRTETA | 42 | 3e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05600 | FLGFLIH | 43 | 6e-07 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05602 | HTHFIS | 43 | 2e-06 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
| 83 | SB48_HM08orf05659 | SB48_HM08orf05668 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf05659 | -3 | 10 | -0.031073 | PTS modulated transcriptional regulator, MtlR | |
| SB48_HM08orf05660 | -1 | 13 | 2.504027 | MFS transporter | |
| SB48_HM08orf05663 | -2 | 12 | 2.046774 | alcohol dehydrogenase | |
| SB48_HM08orf05665 | -1 | 17 | 1.808552 | hypothetical protein | |
| SB48_HM08orf05666 | -1 | 16 | 1.775710 | hypothetical protein | |
| SB48_HM08orf05667 | 1 | 15 | 0.955737 | L-carnitine dehydratase/bile acid-inducible | |
| SB48_HM08orf05668 | -1 | 14 | -0.407543 | butyryl-CoA dehydrogenase |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05659 | PF05043 | 32 | 0.008 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05660 | TCRTETA | 34 | 9e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05663 | PHPHTRNFRASE | 29 | 0.020 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf05668 | CHANNELTSX | 31 | 0.008 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
| 84 | SB48_HM08orf06241 | SB48_HM08orf06250 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
| LocusTag | DNBias | CDNBias | %GCBias | Product | |
| SB48_HM08orf06241 | 1 | 25 | -3.690534 | MFS transporter | |
| SB48_HM08orf06242 | 1 | 22 | -2.854513 | hypothetical protein | |
| SB48_HM08orf06244 | 0 | 21 | -0.463039 | hypothetical protein | |
| SB48_HM08orf06246 | -1 | 22 | 0.065076 | TetR family transcriptional regulator | |
| SB48_HM08orf06245 | 0 | 18 | -1.295942 | hypothetical protein | |
| SB48_HM08orf06247 | 0 | 19 | -1.670473 | isochorismatase hydrolase | |
| SB48_HM08orf06249 | 1 | 20 | -2.037362 | hypothetical protein | |
| SB48_HM08orf06250 | 1 | 20 | -2.584176 | major facilitator superfamily protein |
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06241 | TCRTETA | 48 | 3e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06246 | HTHTETR | 50 | 6e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06247 | ISCHRISMTASE | 47 | 1e-08 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
| ORFs having significant similarity with Known Virulence factors | |||||
| LocusTag | Hits | Score | E-value | Comments | |
| SB48_HM08orf06250 | TCRTETB | 70 | 2e-15 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||