S.No | Start | End | Bias | Virulence | Insertion elements | Prediction |
1 | APE00007 | APE00012 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00007 | 3 | 17 | -1.908451 | hypothetical protein | |
APE00008 | 3 | 15 | -1.924255 | hypothetical protein | |
APE00009 | 3 | 16 | -2.242724 | HTH-type transcriptional regulator LutR | |
APE00010 | 4 | 16 | -0.785759 | putative 2-dehydro-3-deoxygalactonokinase DgoK1 | |
APE00011 | 4 | 12 | -0.873478 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | |
APE00012 | 4 | 11 | -1.472968 | D-galactonate dehydratase |
2 | APE00060 | APE00087 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00060 | -1 | 15 | 3.378269 | HTH-type transcriptional regulator HdfR | |
APE00061 | -1 | 16 | 2.952901 | 4-oxalmesaconate hydratase | |
APE00062 | 0 | 17 | 3.201209 | 4-carboxy-4-hydroxy-2-oxoadipic acid aldolase | |
APE00063 | 1 | 16 | 3.744008 | 4-oxalomesaconate tautomerase | |
APE00064 | 0 | 18 | 3.080777 | hypothetical protein | |
APE00065 | 1 | 18 | 3.641201 | hypothetical protein | |
APE00066 | 1 | 20 | 4.048333 | hypothetical protein | |
APE00067 | 1 | 20 | 4.369280 | putative inner membrane transporter YicL | |
APE00068 | -1 | 22 | 4.852675 | PTS system N-acetylmuramic acid-specific EIIBC | |
APE00069 | -1 | 21 | 4.741460 | N-acetylmuramic acid 6-phosphate etherase | |
APE00070 | -1 | 20 | 4.491638 | Bicyclomycin resistance protein | |
APE00071 | -2 | 18 | 4.115471 | Outer membrane protein OprM | |
APE00072 | -1 | 19 | 3.896744 | hypothetical protein | |
APE00073 | -1 | 18 | 4.218434 | Multidrug resistance protein MexB | |
APE00074 | 1 | 15 | 3.484760 | Multidrug resistance protein MexA | |
APE00075 | 2 | 19 | 3.046637 | Acetyltransferase | |
APE00076 | 2 | 18 | 3.440618 | HTH-type transcriptional regulator BetI | |
APE00077 | 3 | 18 | 4.567436 | Multidrug resistance protein 3 | |
APE00078 | 0 | 18 | 3.843913 | HTH-type transcriptional regulator DmlR | |
APE00079 | 1 | 18 | 3.314565 | hypothetical protein | |
APE00080 | 0 | 19 | 3.366733 | hypothetical protein | |
APE00081 | 0 | 18 | 3.324841 | hypothetical protein | |
APE00082 | -1 | 18 | 3.898253 | HTH-type transcriptional regulator MtrA | |
APE00083 | 0 | 16 | 3.007162 | Lipoprotein 28 | |
APE00084 | 0 | 15 | 3.067466 | hypothetical protein | |
APE00085 | 0 | 15 | 2.949760 | RNA pyrophosphohydrolase | |
APE00086 | 0 | 16 | 3.377578 | hypothetical protein | |
APE00087 | -1 | 14 | 3.371967 | HTH-type transcriptional regulator CdhR |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00070 | TCRTETA | 68 | 1e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00073 | ACRIFLAVINRP | 1144 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00074 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00075 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00076 | HTHTETR | 70 | 7e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00077 | TCRTETB | 139 | 2e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
3 | APE00121 | APE00136 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00121 | 1 | 24 | -4.019910 | hypothetical protein | |
APE00122 | 2 | 31 | -6.263673 | Voltage-gated ClC-type chloride channel ClcB | |
APE00123 | 2 | 38 | -9.604900 | Bifunctional transcriptional activator/DNA | |
APE00124 | 1 | 40 | -11.103521 | hypothetical protein | |
APE00125 | 1 | 37 | -10.104741 | hypothetical protein | |
APE00126 | 2 | 39 | -10.302795 | hypothetical protein | |
APE00127 | 1 | 30 | -7.937615 | hypothetical protein | |
APE00128 | 0 | 23 | -6.156657 | putative multidrug ABC transporter ATP-binding | |
APE00129 | -1 | 17 | -4.083722 | putative multidrug ABC transporter permease | |
APE00130 | -1 | 13 | -1.168945 | Ribonuclease PH | |
APE00131 | -1 | 14 | -2.085861 | Orotate phosphoribosyltransferase | |
APE00132 | 0 | 16 | -2.433043 | Gluconolactonase | |
APE00133 | 0 | 17 | -2.901937 | Nucleoid occlusion factor SlmA | |
APE00134 | -1 | 15 | -1.856650 | Deoxyuridine 5'-triphosphate | |
APE00135 | -1 | 14 | -2.541877 | Coenzyme A biosynthesis bifunctional protein | |
APE00136 | -1 | 15 | -3.145198 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00127 | RTXTOXIND | 60 | 3e-12 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00129 | ABC2TRNSPORT | 45 | 2e-07 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00133 | HTHTETR | 52 | 1e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00135 | UREASE | 30 | 0.017 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. |
4 | APE00231 | APE00236 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00231 | -1 | 14 | 3.434405 | Cellulose biosynthesis protein BcsQ | |
APE00232 | -1 | 13 | 3.796744 | Cellulose synthase catalytic subunit | |
APE00233 | 0 | 15 | 4.696623 | Cellulose synthase catalytic subunit | |
APE00234 | 1 | 15 | 4.661993 | Cyclic di-GMP-binding protein | |
APE00235 | 2 | 16 | 4.194877 | hypothetical protein | |
APE00236 | 1 | 15 | 3.532634 | Cellulose synthase operon protein C |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00236 | SYCDCHAPRONE | 30 | 0.027 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD |
5 | APE00247 | APE00252 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00247 | -2 | 17 | 3.655396 | Cellulose synthase catalytic subunit | |
APE00248 | -1 | 17 | 3.739357 | Cellulose synthase catalytic subunit | |
APE00249 | -1 | 18 | 4.892118 | Cyclic di-GMP-binding protein | |
APE00250 | 0 | 14 | 4.488575 | Cyclic di-GMP-binding protein | |
APE00251 | -1 | 12 | 3.497376 | Endoglucanase | |
APE00252 | 0 | 12 | 3.063677 | Cellulose synthase operon protein C |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00247 | PF08280 | 27 | 0.047 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator |
6 | APE00281 | APE00307 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00281 | 5 | 16 | 3.409830 | Magnesium transporter MgtE | |
APE00283 | 7 | 15 | 4.658439 | hypothetical protein | |
APE00284 | 4 | 14 | 4.854263 | Nickel-responsive regulator | |
APE00285 | 4 | 13 | 5.385334 | Nickel import ATP-binding protein NikE | |
APE00286 | 1 | 15 | 4.224399 | Nickel import ATP-binding protein NikD | |
APE00287 | 0 | 14 | 3.485427 | Nickel transport system permease protein NikC | |
APE00288 | -1 | 15 | 2.839386 | Nickel transport system permease protein NikB | |
APE00289 | -2 | 15 | 2.126242 | Nickel-binding periplasmic protein | |
APE00290 | -1 | 15 | 1.835148 | HTH-type transcriptional activator AllS | |
APE00291 | -2 | 16 | 1.319167 | Phenolic acid decarboxylase PadC | |
APE00292 | -2 | 16 | 2.067142 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate | |
APE00293 | -2 | 17 | 2.081055 | Undecaprenyl-phosphate | |
APE00294 | 0 | 14 | 2.202264 | Bifunctional polymyxin resistance protein ArnA | |
APE00295 | 3 | 12 | 2.939881 | putative | |
APE00296 | 3 | 13 | 2.195815 | Undecaprenyl | |
APE00297 | 3 | 16 | 2.282649 | putative | |
APE00298 | 2 | 12 | 4.110052 | putative | |
APE00299 | 1 | 11 | 3.926774 | Putative transport protein YhhT | |
APE00300 | 1 | 10 | 3.486436 | putative MFS-type transporter YhhS | |
APE00301 | 1 | 12 | 3.427939 | Queuosine precursor transporter | |
APE00302 | 2 | 12 | 2.913288 | Sulfur carrier protein TusA | |
APE00303 | 1 | 11 | 2.635792 | Zinc/cadmium/lead-transporting P-type ATPase | |
APE00304 | 2 | 10 | 0.348118 | hypothetical protein | |
APE00305 | 4 | 12 | -0.309471 | hypothetical protein | |
APE00306 | 2 | 11 | 0.951274 | Ribosomal RNA small subunit methyltransferase D | |
APE00307 | 2 | 11 | 0.743937 | Signal recognition particle receptor FtsY |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00293 | ACRIFLAVINRP | 31 | 0.011 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00294 | NUCEPIMERASE | 108 | 5e-28 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00297 | BCTERIALGSPC | 32 | 2e-04 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00300 | TCRTETA | 51 | 4e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00302 | PF01206 | 103 | 3e-33 | SirA family protein | |
>PF01206#SirA family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00307 | IGASERPTASE | 51 | 9e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
7 | APE00599 | APE00611 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00599 | -1 | 18 | -3.289806 | Ribosomal RNA small subunit methyltransferase I | |
APE00600 | -1 | 18 | -3.453274 | hypothetical protein | |
APE00601 | -1 | 17 | -1.815661 | Glucitol operon repressor | |
APE00602 | -2 | 16 | -1.208939 | Galactitol 1-phosphate 5-dehydrogenase | |
APE00603 | -1 | 18 | -2.298682 | PTS system galactitol-specific EIIC component | |
APE00604 | -1 | 22 | -2.751570 | PTS system galactitol-specific EIIB component | |
APE00605 | -1 | 20 | -2.659237 | PTS system galactitol-specific EIIA component | |
APE00606 | -1 | 21 | -3.008136 | D-tagatose-1,6-bisphosphate aldolase subunit | |
APE00607 | 0 | 23 | -3.569703 | hypothetical protein | |
APE00608 | 0 | 20 | -3.973614 | PTS system fructose-specific EIIABC component | |
APE00609 | 0 | 16 | -2.568883 | Tagatose-6-phosphate kinase | |
APE00610 | 0 | 14 | -2.706133 | D-tagatose-1,6-bisphosphate aldolase subunit | |
APE00611 | 0 | 14 | -3.242340 | D-tagatose-1,6-bisphosphate aldolase subunit |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00602 | DHBDHDRGNASE | 34 | 7e-04 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00608 | BCTERIALGSPD | 30 | 0.026 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D |
8 | APE00643 | APE00660 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00643 | 0 | 14 | 3.546065 | hypothetical protein | |
APE00644 | 1 | 14 | 3.655237 | hypothetical protein | |
APE00645 | 1 | 13 | 3.501517 | Ribosomal RNA large subunit methyltransferase G | |
APE00646 | 0 | 13 | 3.832411 | Ribosomal RNA large subunit methyltransferase G | |
APE00647 | 0 | 13 | 4.242725 | 2,4-dienoyl-CoA reductase | |
APE00648 | -1 | 13 | 3.828141 | Autoinducer-2 kinase | |
APE00649 | 0 | 15 | 3.077468 | Transcriptional regulator LsrR | |
APE00650 | -1 | 16 | 2.575924 | Autoinducer 2 import ATP-binding protein LsrA | |
APE00651 | 1 | 15 | 1.622223 | Autoinducer 2 import system permease protein | |
APE00652 | 0 | 16 | 1.095777 | Autoinducer 2 import system permease protein | |
APE00653 | 0 | 16 | 0.649454 | Autoinducer 2-binding protein LsrB | |
APE00654 | 0 | 17 | 1.053445 | 3-hydroxy-5-phosphonooxypentane-2,4-dione | |
APE00655 | 0 | 14 | 2.614733 | (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione | |
APE00656 | 0 | 13 | 3.326317 | Putrescine aminotransferase | |
APE00657 | 0 | 15 | 3.938415 | Transcriptional regulator YqjI | |
APE00658 | 0 | 15 | 3.742847 | hypothetical protein | |
APE00659 | 0 | 16 | 3.625582 | NADPH-dependent ferric-chelate reductase | |
APE00660 | 0 | 14 | 3.058670 | Dihydroxyacetone kinase |
9 | APE00691 | APE00708 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00691 | 1 | 18 | 3.622507 | tRNA N6-adenosine threonylcarbamoyltransferase | |
APE00692 | 1 | 19 | 3.536308 | hypothetical protein | |
APE00693 | 2 | 21 | 4.252908 | Urease accessory protein UreG | |
APE00694 | 2 | 20 | 4.832425 | Urease accessory protein UreF | |
APE00695 | 1 | 20 | 3.988047 | Urease accessory protein UreE | |
APE00696 | 2 | 19 | 3.289922 | Urease subunit alpha | |
APE00698 | 0 | 20 | 1.993458 | Urease subunit beta | |
APE00699 | -1 | 15 | 0.355179 | Urease subunit gamma | |
APE00700 | -1 | 13 | 1.783965 | Urease accessory protein UreD | |
APE00701 | -1 | 12 | 0.322036 | putative glycerol-3-phosphate acyltransferase | |
APE00702 | -1 | 13 | 1.207684 | Dihydroneopterin aldolase | |
APE00703 | -1 | 12 | 2.956136 | Dihydroneopterin aldolase | |
APE00704 | 0 | 12 | 3.063677 | Undecaprenyl-diphosphatase | |
APE00705 | 0 | 12 | 3.359555 | Multifunctional CCA protein | |
APE00706 | 1 | 12 | 2.770274 | hypothetical protein | |
APE00707 | 2 | 11 | 3.197391 | Inorganic triphosphatase | |
APE00708 | 2 | 11 | 2.851404 | Bifunctional glutamine synthetase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00696 | UREASE | 1081 | 0.0 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. |
10 | APE00764 | APE00769 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00764 | 0 | 30 | -5.725079 | HTH-type transcriptional regulator DmlR | |
APE00765 | -1 | 31 | -6.797144 | Cystathionine beta-lyase | |
APE00766 | 0 | 36 | -8.086666 | Putative cystathionine beta-synthase | |
APE00767 | -1 | 31 | -7.852678 | hypothetical protein | |
APE00768 | -1 | 25 | -7.303465 | hypothetical protein | |
APE00769 | -2 | 21 | -6.865414 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00768 | SACTRNSFRASE | 30 | 0.004 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
11 | APE00817 | APE00832 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00817 | 2 | 16 | 3.206560 | 2-succinyl-6-hydroxy-2, | |
APE00818 | 2 | 17 | 2.425155 | hypothetical protein | |
APE00819 | 3 | 19 | 3.261304 | L-aspartate dehydrogenase | |
APE00820 | 3 | 15 | 0.963521 | L-aspartate dehydrogenase | |
APE00821 | 1 | 13 | 0.531773 | NAD/NADP-dependent betaine aldehyde | |
APE00822 | 0 | 17 | 0.245198 | Phenylacetaldehyde dehydrogenase | |
APE00823 | 0 | 18 | 0.403770 | hypothetical protein | |
APE00824 | 0 | 17 | 0.005690 | Acetolactate synthase isozyme 1 large subunit | |
APE00825 | 2 | 22 | -1.666116 | Porin D | |
APE00826 | 4 | 31 | -0.920352 | Metalloprotease LoiP | |
APE00827 | 5 | 38 | -1.626704 | Transketolase 1 | |
APE00828 | 5 | 31 | -3.150923 | D-erythrose-4-phosphate dehydrogenase | |
APE00829 | 2 | 29 | -3.485539 | D-erythrose-4-phosphate dehydrogenase | |
APE00830 | 2 | 30 | -2.753923 | Phosphoglycerate kinase | |
APE00831 | 1 | 29 | -2.185981 | Phosphoglycerate kinase | |
APE00832 | 2 | 20 | -1.602931 | Fructose-bisphosphate aldolase class 2 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00818 | DHBDHDRGNASE | 85 | 1e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
12 | APE00884 | APE00901 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00884 | 2 | 15 | 2.019485 | hypothetical protein | |
APE00885 | 0 | 13 | 1.461990 | hypothetical protein | |
APE00886 | 0 | 15 | 0.956137 | hypothetical protein | |
APE00887 | 1 | 14 | 2.126389 | hypothetical protein | |
APE00888 | 0 | 12 | 3.377917 | Arsenical pump membrane protein | |
APE00889 | -1 | 14 | 4.089090 | Arsenate reductase | |
APE00890 | -1 | 14 | 4.033711 | Di-/tripeptide transporter | |
APE00891 | -1 | 15 | 4.735503 | hypothetical protein | |
APE00892 | 0 | 15 | 4.756621 | Cation efflux system protein CusC | |
APE00893 | -1 | 14 | 3.487911 | Multidrug resistance protein MdtO | |
APE00894 | -2 | 14 | 1.019428 | Multidrug resistance protein MdtN | |
APE00895 | -1 | 15 | 0.071892 | Multidrug resistance protein MdtN | |
APE00896 | -1 | 14 | 0.612102 | hypothetical protein | |
APE00897 | 0 | 14 | 1.179727 | hypothetical protein | |
APE00898 | 2 | 16 | 2.016137 | putative protein YjdJ | |
APE00899 | 2 | 14 | 2.019360 | hypothetical protein | |
APE00900 | 3 | 15 | 1.830643 | Type 1 fimbrin D-mannose specific adhesin | |
APE00901 | 3 | 14 | 1.555504 | Protein FimG |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00890 | TCRTETB | 31 | 0.010 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00893 | TYPE3IMSPROT | 29 | 0.050 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00894 | RTXTOXIND | 61 | 6e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00895 | RTXTOXIND | 34 | 5e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00898 | SACTRNSFRASE | 28 | 0.002 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
13 | APE00912 | APE00919 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00912 | 3 | 16 | -1.618486 | hypothetical protein | |
APE00913 | 4 | 14 | -1.373939 | hypothetical protein | |
APE00914 | 4 | 14 | -2.212905 | Chaperone protein FimC | |
APE00915 | 3 | 14 | -2.905174 | Outer membrane usher protein HtrE | |
APE00916 | 3 | 16 | -5.127157 | Outer membrane usher protein YehB | |
APE00917 | 3 | 21 | -4.878984 | Fimbria adhesin protein | |
APE00918 | 1 | 20 | -5.268777 | hypothetical protein | |
APE00919 | -1 | 19 | -5.036605 | Cyclic di-GMP phosphodiesterase PdeH |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00915 | PF00577 | 426 | e-143 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00916 | PF00577 | 248 | 1e-77 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD |
14 | APE00963 | APE00990 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00963 | 1 | 16 | 3.483574 | Phosphoenolpyruvate-dependent phosphotransferase | |
APE00964 | 0 | 17 | 3.383320 | Phosphatidylglycerol--prolipoprotein | |
APE00965 | 3 | 17 | 3.962027 | Thymidylate synthase | |
APE00966 | 4 | 18 | 4.440620 | hypothetical protein | |
APE00967 | 2 | 14 | 2.914383 | hypothetical protein | |
APE00968 | 2 | 14 | 3.271769 | hypothetical protein | |
APE00969 | 2 | 15 | 4.000564 | hypothetical protein | |
APE00970 | 2 | 14 | 3.815818 | RecBCD enzyme subunit RecC | |
APE00971 | 2 | 14 | 3.412333 | RecBCD enzyme subunit RecC | |
APE00972 | 1 | 13 | 3.166902 | Protease 3 | |
APE00973 | 2 | 15 | 4.278164 | RecBCD enzyme subunit RecB | |
APE00974 | 1 | 16 | 4.186568 | RecBCD enzyme subunit RecD | |
APE00975 | 0 | 15 | 2.422923 | hypothetical protein | |
APE00976 | 0 | 15 | 2.619548 | Amino-acid acetyltransferase | |
APE00977 | 0 | 15 | 3.305786 | N-acetylmuramoyl-L-alanine amidase AmiC | |
APE00978 | 2 | 18 | 4.139297 | Threonine-phosphate decarboxylase | |
APE00979 | 1 | 15 | 4.214039 | L-threonine kinase | |
APE00980 | 0 | 13 | 4.157320 | putative propionate kinase | |
APE00981 | 1 | 15 | 4.736428 | Propanediol utilization protein PduV | |
APE00982 | -1 | 13 | 4.187191 | Propanediol utilization protein PduU | |
APE00983 | -1 | 14 | 4.421594 | hypothetical protein | |
APE00984 | 0 | 14 | 4.619704 | Ion-translocating oxidoreductase complex subunit | |
APE00985 | 1 | 17 | 4.148730 | Aldehyde-alcohol dehydrogenase | |
APE00986 | 1 | 20 | 3.953388 | hypothetical protein | |
APE00987 | 1 | 21 | 3.137289 | N-succinylglutamate 5-semialdehyde | |
APE00988 | 3 | 20 | 4.969966 | hypothetical protein | |
APE00989 | 1 | 18 | 4.674516 | hypothetical protein | |
APE00990 | 0 | 20 | 3.933502 | Carbon dioxide concentrating mechanism protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00963 | PHPHTRNFRASE | 593 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00966 | BCTERIALGSPH | 29 | 0.008 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00969 | BCTERIALGSPH | 26 | 0.035 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00980 | ACETATEKNASE | 559 | 0.0 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. |
15 | APE01007 | APE01042 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01007 | 1 | 17 | 3.779906 | HTH-type transcriptional activator RhaS | |
APE01009 | 2 | 18 | 5.053838 | Cobyrinate a,c-diamide synthase | |
APE01010 | 1 | 19 | 5.374782 | Cobalamin biosynthesis protein CobD | |
APE01011 | 0 | 22 | 5.197956 | Cobalt-precorrin-8 methylmutase | |
APE01012 | -1 | 19 | 5.797428 | Cobalt-precorrin-5B C(1)-methyltransferase | |
APE01013 | 0 | 22 | 5.724653 | Cobalt-precorrin-7 C(5)-methyltransferase | |
APE01014 | 0 | 20 | 5.572114 | Cobalt-precorrin-6B C(15)-methyltransferase | |
APE01015 | -2 | 18 | 4.919406 | Cobalt-precorrin-4 C(11)-methyltransferase | |
APE01016 | 1 | 18 | 5.300386 | Cobalt-precorrin-5A hydrolase | |
APE01017 | 1 | 18 | 4.988136 | hypothetical protein | |
APE01018 | 2 | 18 | 4.002289 | putative cobalt-factor III | |
APE01019 | 3 | 17 | 4.209419 | Cobalt-precorrin-6A reductase | |
APE01020 | 2 | 20 | 3.548028 | Sirohydrochlorin cobaltochelatase | |
APE01021 | 3 | 20 | 4.069145 | Cobalt-precorrin-2 C(20)-methyltransferase | |
APE01022 | 2 | 20 | 3.547028 | Cobalt transport protein CbiM | |
APE01023 | 3 | 21 | 4.343948 | Cobalt transport protein CbiN | |
APE01024 | 3 | 20 | 3.702218 | Cobalt transport protein CbiQ | |
APE01025 | 2 | 18 | 2.563715 | Cobalt import ATP-binding protein CbiO | |
APE01026 | 1 | 18 | 1.291765 | Cobyric acid synthase | |
APE01027 | 0 | 18 | -0.872625 | Bifunctional adenosylcobalamin biosynthesis | |
APE01028 | 1 | 20 | -1.232915 | Nicotinate-nucleotide--dimethylbenzimidazole | |
APE01029 | 1 | 25 | -2.920145 | hypothetical protein | |
APE01030 | 2 | 31 | -5.202572 | hypothetical protein | |
APE01031 | 3 | 31 | -5.608154 | hypothetical protein | |
APE01032 | 2 | 33 | -7.024435 | hypothetical protein | |
APE01033 | 3 | 39 | -8.656471 | hypothetical protein | |
APE01034 | 2 | 47 | -11.005673 | hypothetical protein | |
APE01035 | 4 | 56 | -15.002749 | hypothetical protein | |
APE01036 | 4 | 51 | -13.348480 | hypothetical protein | |
APE01037 | 2 | 36 | -8.945845 | hypothetical protein | |
APE01038 | 2 | 33 | -7.259526 | hypothetical protein | |
APE01039 | 0 | 30 | -4.947694 | hypothetical protein | |
APE01040 | 1 | 26 | -2.735424 | hypothetical protein | |
APE01041 | 2 | 27 | -2.174903 | hypothetical protein | |
APE01042 | 2 | 24 | -1.607727 | Actin cross-linking toxin VgrG1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01018 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01040 | PF05616 | 27 | 0.009 | Neisseria meningitidis TspB protein | |
>PF05616#Neisseria meningitidis TspB protein |
16 | APE01064 | APE01071 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01064 | -1 | 15 | 3.308038 | L-fucose-proton symporter | |
APE01065 | 0 | 14 | 4.943683 | L-fucose-proton symporter | |
APE01066 | 0 | 14 | 6.231410 | L-fuculose phosphate aldolase | |
APE01067 | 0 | 13 | 6.212549 | Lactaldehyde reductase | |
APE01068 | 3 | 15 | 6.786880 | Flap endonuclease Xni | |
APE01069 | 2 | 14 | 6.483963 | Anaerobic nitric oxide reductase transcription | |
APE01070 | 2 | 15 | 6.142246 | Methanesulfonate monooxygenase | |
APE01071 | 0 | 15 | 5.148127 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01069 | HTHFIS | 378 | e-127 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
17 | APE01126 | APE01144 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01126 | 0 | 13 | 3.245317 | Phenolic acid decarboxylase | |
APE01127 | 2 | 14 | 4.619519 | Protein VdcD | |
APE01129 | 3 | 15 | 4.863247 | Toxic protein HokE | |
APE01130 | 1 | 17 | 4.239898 | DNA mismatch repair protein MutS | |
APE01131 | 1 | 16 | 4.089485 | Hemin import ATP-binding protein HmuV | |
APE01132 | 1 | 19 | 3.714527 | Hemin transport system permease protein HmuU | |
APE01133 | -1 | 17 | 3.310644 | Hemin-binding periplasmic protein HmuT | |
APE01134 | 0 | 16 | 1.518650 | Hemin transport protein HemS | |
APE01135 | 0 | 15 | 0.441679 | hypothetical protein | |
APE01136 | 2 | 13 | 0.628693 | hypothetical protein | |
APE01137 | 1 | 13 | 0.243661 | hypothetical protein | |
APE01138 | 1 | 13 | 0.475084 | Acetolactate synthase isozyme 3 large subunit | |
APE01139 | 1 | 14 | -0.470608 | hypothetical protein | |
APE01140 | 1 | 13 | 1.541775 | HTH-type transcriptional regulator TsaR | |
APE01141 | 1 | 13 | 2.416846 | hypothetical protein | |
APE01142 | 1 | 14 | 3.051988 | Manganese transport system membrane protein | |
APE01143 | 1 | 15 | 3.445813 | Manganese transport system membrane protein | |
APE01144 | 0 | 14 | 3.324241 | Manganese transport system ATP-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01129 | HOKGEFTOXIC | 54 | 1e-14 | Hok/Gef cell toxic protein family signature. | |
>HOKGEFTOXIC#Hok/Gef cell toxic protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01133 | FERRIBNDNGPP | 36 | 7e-05 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01144 | PF07675 | 28 | 0.041 | Cleaved Adhesin | |
>PF07675#Cleaved Adhesin |
18 | APE01157 | APE01165 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01157 | -1 | 18 | 3.668494 | Formate hydrogenlyase transcriptional activator | |
APE01158 | -1 | 18 | 3.788780 | Carbamoyl dehydratase HypE | |
APE01159 | 0 | 18 | 2.852145 | Hydrogenase maturation factor HypD | |
APE01160 | 3 | 17 | 3.403381 | Hydrogenase maturation factor HypC | |
APE01161 | 3 | 16 | 3.970968 | Hydrogenase maturation factor HypB | |
APE01162 | 4 | 16 | 4.015635 | Hydrogenase maturation factor HypA | |
APE01163 | 1 | 22 | 3.566575 | Formate hydrogenlyase regulatory protein HycA | |
APE01164 | 1 | 22 | 3.811466 | Hydrogenase-4 component A | |
APE01165 | 0 | 22 | 3.656688 | Hydrogenase-4 component B |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01157 | HTHFIS | 377 | e-126 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
19 | APE01174 | APE01179 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01174 | -1 | 14 | 3.477353 | Aryl-phospho-beta-D-glucosidase BglH | |
APE01175 | 0 | 14 | 4.127707 | Aryl-phospho-beta-D-glucosidase BglA | |
APE01176 | 0 | 14 | 4.166690 | PTS system beta-glucoside-specific EIIBCA | |
APE01177 | -1 | 13 | 3.163918 | HTH-type transcriptional regulator AscG | |
APE01178 | 0 | 12 | 3.522969 | Hydrogenase-4 component A | |
APE01179 | 0 | 12 | 3.648186 | Carbamoyltransferase HypF |
20 | APE01188 | APE01198 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01188 | -2 | 18 | 3.101074 | PTS system glucitol/sorbitol-specific EIIA | |
APE01189 | -1 | 17 | 3.541922 | PTS system glucitol/sorbitol-specific EIIB | |
APE01190 | 0 | 17 | 2.819378 | PTS system glucitol/sorbitol-specific EIIC | |
APE01191 | 0 | 16 | 3.493691 | Membrane-bound lytic murein transglycosylase B | |
APE01192 | -1 | 16 | 2.184870 | hypothetical protein | |
APE01193 | -1 | 14 | 1.907734 | Manganese import ATP-binding protein ScaC | |
APE01194 | 1 | 17 | 0.742843 | Manganese transport system membrane protein | |
APE01195 | 2 | 20 | -0.345892 | Manganese-binding lipoprotein MntA | |
APE01196 | 4 | 21 | -0.864805 | Nicotinamide-nucleotide amidohydrolase PncC | |
APE01197 | 3 | 22 | -0.943703 | Protein RecA | |
APE01198 | 2 | 17 | -0.682967 | Regulatory protein RecX |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01194 | TYPE3IMSPROT | 28 | 0.040 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01195 | adhesinb | 238 | 1e-79 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. |
21 | APE01244 | APE01285 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01244 | 1 | 25 | -6.138673 | hypothetical protein | |
APE01245 | 1 | 25 | -6.740544 | hypothetical protein | |
APE01246 | 1 | 22 | -5.848181 | Outer membrane usher protein FimD | |
APE01247 | 0 | 20 | -5.236090 | putative fimbrial chaperone YadV | |
APE01248 | -1 | 15 | -1.779101 | hypothetical protein | |
APE01249 | -1 | 15 | 0.098815 | hypothetical protein | |
APE01250 | 0 | 19 | 3.551535 | Cyclohexadienyl dehydratase | |
APE01251 | 1 | 21 | 3.783468 | hypothetical protein | |
APE01252 | 0 | 19 | 3.733426 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE01253 | 0 | 20 | 3.952657 | Glyoxylate/hydroxypyruvate reductase A | |
APE01254 | 1 | 21 | 3.711691 | 4-hydroxy-3-prenylphenylpyruvate | |
APE01255 | 2 | 22 | 3.246651 | Vitamin B12 import ATP-binding protein BtuD | |
APE01256 | 0 | 21 | 2.770663 | L-cystine-binding protein FliY | |
APE01257 | -1 | 16 | 2.505116 | Validamycin A dioxygenase | |
APE01258 | -1 | 15 | 2.287420 | hypothetical protein | |
APE01259 | 0 | 14 | 1.538086 | Guanidinobutyrase | |
APE01260 | -1 | 11 | 0.481455 | hypothetical protein | |
APE01261 | 0 | 9 | 0.497475 | hypothetical protein | |
APE01262 | 0 | 11 | 0.241493 | multidrug efflux RND transporter permease | |
APE01263 | -1 | 23 | -5.693170 | Efflux pump periplasmic linker BepF | |
APE01264 | 1 | 29 | -6.856077 | Right origin-binding protein | |
APE01265 | 2 | 33 | -7.314772 | hypothetical protein | |
APE01266 | 3 | 46 | -10.556388 | HTH-type transcriptional regulator PgrR | |
APE01267 | 4 | 52 | -12.669655 | hypothetical protein | |
APE01268 | 4 | 55 | -13.472968 | hypothetical protein | |
APE01269 | 4 | 51 | -11.375313 | IS3 family transposase ISEc14 | |
APE01270 | 4 | 53 | -12.116719 | IS3 family transposase ISEam1 | |
APE01271 | 4 | 51 | -11.934031 | hypothetical protein | |
APE01272 | 2 | 37 | -8.999172 | hypothetical protein | |
APE01273 | 3 | 33 | -7.700290 | hypothetical protein | |
APE01274 | 3 | 17 | -2.043518 | Prophage integrase IntA | |
APE01276 | 3 | 15 | -0.141791 | SsrA-binding protein | |
APE01277 | 2 | 15 | -0.423934 | Ribosome association toxin RatA | |
APE01278 | 2 | 14 | -0.458069 | hypothetical protein | |
APE01279 | 2 | 14 | -0.701886 | Outer membrane protein assembly factor BamE | |
APE01280 | 1 | 16 | -0.198361 | DNA repair protein RecN | |
APE01281 | 1 | 15 | -1.640243 | NAD kinase | |
APE01282 | 0 | 16 | -2.479307 | Protein GrpE | |
APE01283 | 0 | 15 | -2.801221 | hypothetical protein | |
APE01284 | 1 | 21 | -3.607802 | Inner membrane protein YpjD | |
APE01285 | 1 | 22 | -3.136473 | Signal recognition particle protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01246 | PF00577 | 720 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01252 | DHBDHDRGNASE | 96 | 1e-25 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01262 | ACRIFLAVINRP | 1037 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01263 | RTXTOXIND | 53 | 1e-09 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01277 | FLGMOTORFLIM | 28 | 0.016 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. |
22 | APE01345 | APE01386 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01345 | -1 | 13 | -3.258192 | Nitrogen regulatory protein P-II | |
APE01346 | -1 | 13 | -2.834037 | Flavohemoprotein | |
APE01347 | -1 | 16 | -3.002602 | Serine hydroxymethyltransferase | |
APE01348 | 0 | 19 | -2.879040 | Inner membrane protein YphA | |
APE01349 | 0 | 20 | -3.078030 | N-acetylglucosamine repressor | |
APE01350 | 0 | 17 | -1.842518 | hypothetical protein | |
APE01351 | 1 | 15 | -1.123889 | hypothetical protein | |
APE01352 | 0 | 15 | -0.807985 | Galactose-proton symporter | |
APE01353 | 0 | 14 | -0.991905 | D-xylose-proton symporter | |
APE01354 | 2 | 15 | 0.705189 | putative protein YphB | |
APE01355 | 3 | 14 | 1.827643 | putative 3-phenylpropionic acid transporter | |
APE01356 | 1 | 13 | 0.661419 | hypothetical protein | |
APE01357 | 1 | 15 | 1.205871 | hypothetical protein | |
APE01358 | 0 | 14 | 0.888885 | hypothetical protein | |
APE01359 | 0 | 14 | 1.183943 | hypothetical protein | |
APE01360 | -1 | 17 | -0.923420 | hypothetical protein | |
APE01361 | 1 | 22 | -1.760497 | Inositol-1-monophosphatase | |
APE01362 | 1 | 21 | -2.141248 | tRNA (cytidine/uridine-2'-O-)-methyltransferase | |
APE01363 | 3 | 21 | -3.481821 | HTH-type transcriptional regulator IscR | |
APE01365 | 1 | 18 | -0.529173 | Cysteine desulfurase IscS | |
APE01366 | 1 | 19 | -0.510427 | Cysteine desulfurase IscS | |
APE01367 | 2 | 18 | -0.210552 | Iron-sulfur cluster assembly scaffold protein | |
APE01368 | 0 | 16 | 0.751938 | Iron-binding protein IscA | |
APE01369 | 0 | 16 | 0.774140 | Co-chaperone protein HscB | |
APE01370 | -1 | 15 | 1.224670 | Chaperone protein HscA | |
APE01371 | -1 | 14 | -0.447043 | 2Fe-2S ferredoxin | |
APE01372 | -1 | 14 | 0.739634 | Protein IscX | |
APE01373 | -1 | 15 | 1.405819 | Peptidase B | |
APE01374 | -1 | 13 | 2.894594 | hypothetical protein | |
APE01375 | -1 | 12 | 4.358284 | hypothetical protein | |
APE01376 | 0 | 11 | 4.140445 | hypothetical protein | |
APE01377 | 0 | 11 | 3.725448 | 3-mercaptopyruvate sulfurtransferase | |
APE01378 | 0 | 11 | 3.566768 | hypothetical protein | |
APE01379 | -1 | 12 | 2.867964 | Alpha-2-macroglobulin | |
APE01380 | 0 | 11 | 1.836883 | Penicillin-binding protein 1C | |
APE01381 | 2 | 17 | -0.987083 | Nucleoside diphosphate kinase | |
APE01382 | 1 | 16 | -0.699669 | Dual-specificity RNA methyltransferase RlmN | |
APE01383 | 1 | 14 | -0.610477 | Cytoskeleton protein RodZ | |
APE01384 | 0 | 15 | -2.948867 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |
APE01386 | 0 | 14 | -3.322978 | Histidine--tRNA ligase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01350 | SALSPVBPROT | 31 | 0.017 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01351 | SYCDCHAPRONE | 30 | 0.007 | Gram-negative bacterial type III secretion SycD cha... | |
>SYCDCHAPRONE#Gram-negative bacterial type III secretion SycD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01370 | SHAPEPROTEIN | 110 | 2e-28 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
23 | APE01431 | APE01450 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01431 | -2 | 13 | 3.083567 | Ferredoxin--NADP reductase | |
APE01432 | -1 | 13 | 2.341159 | Glutamate synthase [NADPH] small chain | |
APE01433 | -1 | 14 | 1.842865 | GDP-mannose pyrophosphatase NudK | |
APE01434 | 0 | 13 | 1.932020 | hypothetical protein | |
APE01435 | 2 | 13 | 1.155188 | Transketolase 2 | |
APE01436 | 2 | 15 | 0.708393 | Transaldolase | |
APE01437 | 1 | 15 | 1.267792 | Transaldolase | |
APE01438 | 1 | 15 | 2.502076 | NADP-dependent malic enzyme | |
APE01439 | 1 | 16 | 3.171655 | Ethanolamine utilization protein EutS | |
APE01440 | 0 | 15 | 3.699665 | hypothetical protein | |
APE01441 | 1 | 16 | 4.549228 | Ethanolamine utilization protein EutQ | |
APE01442 | 2 | 14 | 4.777398 | hypothetical protein | |
APE01443 | 3 | 15 | 5.330749 | Ethanolamine utilization protein EutD | |
APE01444 | 3 | 12 | 3.594295 | Ethanolamine utilization protein EutM | |
APE01445 | 2 | 13 | 4.078535 | Ethanolamine utilization protein EutN | |
APE01446 | 1 | 14 | 3.888228 | Gamma-glutamyl phosphate reductase | |
APE01447 | 2 | 15 | 3.637306 | Cell division protein FtsA | |
APE01448 | 1 | 16 | 3.732895 | NAD-dependent methanol dehydrogenase | |
APE01449 | 0 | 14 | 2.822482 | hypothetical protein | |
APE01450 | -2 | 14 | 3.858197 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01447 | SHAPEPROTEIN | 46 | 8e-08 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein |
24 | APE01466 | APE01491 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01466 | 0 | 14 | 3.022391 | Sulfate/thiosulfate import ATP-binding protein | |
APE01467 | -2 | 12 | 1.391615 | Cysteine synthase B | |
APE01468 | -1 | 14 | -1.647932 | putative protein YybH | |
APE01469 | -1 | 16 | -1.786384 | Vitamin B6 salvage pathway transcriptional | |
APE01470 | 0 | 22 | -4.054190 | Pyridoxine/pyridoxal/pyridoxamine kinase | |
APE01471 | 0 | 24 | -5.111366 | hypothetical protein | |
APE01472 | -1 | 22 | -4.022271 | PTS system glucose-specific EIIA component | |
APE01473 | -1 | 15 | -1.796593 | Phosphoenolpyruvate-protein phosphotransferase | |
APE01474 | -1 | 10 | -0.190719 | Phosphocarrier protein HPr | |
APE01475 | -2 | 9 | -0.027167 | Cysteine synthase A | |
APE01476 | -1 | 10 | 0.416604 | Sulfate transporter CysZ | |
APE01477 | -2 | 10 | -0.226082 | Cell division protein ZipA | |
APE01478 | -1 | 10 | -0.635868 | DNA ligase | |
APE01479 | -1 | 13 | -1.985400 | hypothetical protein | |
APE01480 | -2 | 16 | -3.940169 | hypothetical protein | |
APE01481 | -2 | 17 | -4.905250 | HTH-type transcriptional regulator CynR | |
APE01486 | -3 | 16 | -4.780703 | ****Glutamate--tRNA ligase | |
APE01487 | -2 | 17 | -4.785973 | hypothetical protein | |
APE01488 | -2 | 16 | -4.847888 | hypothetical protein | |
APE01491 | -2 | 16 | -4.717752 | **putative cyclic di-GMP phosphodiesterase PdeA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01466 | PF05272 | 34 | 8e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01468 | BCTERIALGSPC | 27 | 0.023 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01473 | PHPHTRNFRASE | 746 | 0.0 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01477 | IGASERPTASE | 53 | 1e-09 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
25 | APE01593 | APE01603 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01593 | -2 | 11 | 3.023813 | L-rhamnonate dehydratase | |
APE01594 | -2 | 12 | 3.989608 | Inner membrane transport protein RhmT | |
APE01595 | -1 | 12 | 3.439079 | 2-keto-3-deoxy-L-rhamnonate aldolase | |
APE01596 | -2 | 10 | 2.273978 | 2-keto-3-deoxy-L-rhamnonate aldolase | |
APE01597 | -2 | 11 | 1.949426 | Anaerobic glycerol-3-phosphate dehydrogenase | |
APE01598 | -2 | 13 | 1.337520 | Anaerobic glycerol-3-phosphate dehydrogenase | |
APE01599 | 0 | 18 | -0.522695 | Anaerobic glycerol-3-phosphate dehydrogenase | |
APE01600 | 0 | 18 | -1.903671 | Glycerol-3-phosphate transporter | |
APE01601 | 2 | 18 | -1.795582 | Glycerophosphodiester phosphodiesterase, | |
APE01602 | 2 | 18 | -1.534386 | Carnitine monooxygenase reductase subunit | |
APE01603 | 2 | 15 | -1.426069 | Ribonucleoside-diphosphate reductase 1 subunit |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01596 | PHPHTRNFRASE | 35 | 9e-05 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01600 | TCRTETA | 30 | 0.013 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01601 | VACCYTOTOXIN | 29 | 0.039 | Helicobacter pylori vacuolating cytotoxin signature. | |
>VACCYTOTOXIN#Helicobacter pylori vacuolating cytotoxin signature. |
26 | APE01685 | APE01706 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01685 | -1 | 20 | 4.111112 | Beta-xylosidase | |
APE01686 | 2 | 23 | 5.793575 | Glycine betaine-binding protein YehZ | |
APE01687 | 3 | 22 | 5.968147 | Glycine betaine uptake system permease protein | |
APE01688 | 2 | 23 | 4.140417 | Glycine betaine uptake system ATP-binding | |
APE01689 | 2 | 20 | 2.984634 | Glycine betaine uptake system ATP-binding | |
APE01690 | 1 | 17 | 1.704390 | Glycine betaine uptake system permease protein | |
APE01691 | 0 | 19 | 0.387838 | hypothetical protein | |
APE01692 | 0 | 19 | 0.766821 | Sensor histidine kinase BtsS | |
APE01693 | 0 | 19 | 1.100069 | Sensor histidine kinase BtsS | |
APE01694 | -1 | 19 | 0.475084 | Transcriptional regulatory protein BtsR | |
APE01695 | -2 | 17 | 0.962586 | hypothetical protein | |
APE01696 | -2 | 17 | 1.870814 | Methionine--tRNA ligase | |
APE01697 | 0 | 12 | 3.800248 | Iron-sulfur cluster carrier protein | |
APE01698 | -1 | 12 | 4.262003 | putative N-acetyltransferase YafP | |
APE01699 | -1 | 13 | 3.923963 | Nickel/cobalt homeostasis protein RcnB | |
APE01700 | 0 | 14 | 5.234672 | HTH-type transcriptional regulator DmlR | |
APE01701 | 0 | 14 | 5.723065 | Adenine permease AdeQ | |
APE01702 | 0 | 15 | 5.545869 | Adenine deaminase 2 | |
APE01703 | -1 | 15 | 3.137654 | Hydrogen peroxide-inducible genes activator | |
APE01704 | -1 | 13 | 3.265755 | hypothetical protein | |
APE01706 | 0 | 13 | 3.495775 | Hydroxyethylthiazole kinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01693 | PF06580 | 213 | 2e-67 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01694 | HTHFIS | 71 | 3e-16 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01698 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01702 | UREASE | 35 | 0.001 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. |
27 | APE01727 | APE01792 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01727 | 1 | 21 | 3.566247 | putative lipid kinase YegS | |
APE01729 | 3 | 26 | 4.400188 | 23S rRNA 5-hydroxycytidine synthase | |
APE01730 | 3 | 25 | 5.214274 | Transcriptional regulatory protein BaeR | |
APE01731 | 3 | 26 | 5.103974 | Signal transduction histidine-protein kinase | |
APE01732 | 4 | 26 | 4.705223 | Putative multidrug resistance protein MdtD | |
APE01733 | 2 | 23 | 3.789112 | Multidrug resistance protein MdtC | |
APE01734 | 1 | 20 | 2.733018 | Multidrug resistance protein MdtB | |
APE01735 | -1 | 13 | 0.331002 | Multidrug resistance protein MdtA | |
APE01736 | 1 | 14 | -0.428036 | C4-dicarboxylate transport protein | |
APE01737 | 1 | 13 | 0.482365 | Proton/sodium-glutamate symport protein | |
APE01738 | 1 | 14 | 1.919569 | hypothetical protein | |
APE01739 | 2 | 14 | 4.600611 | hypothetical protein | |
APE01740 | 2 | 14 | 3.899850 | Virulence transcriptional regulatory protein | |
APE01741 | 1 | 12 | 4.155966 | Adaptive-response sensory-kinase SasA | |
APE01742 | 2 | 14 | 4.011960 | hypothetical protein | |
APE01743 | 3 | 13 | 2.314237 | Chaperone protein DnaK | |
APE01744 | 2 | 11 | 1.260552 | DNA-3-methyladenine glycosylase 2 | |
APE01745 | 1 | 11 | -0.048241 | Uridine kinase | |
APE01746 | 0 | 9 | -0.253027 | dCTP deaminase | |
APE01747 | 0 | 12 | -2.479044 | hypothetical protein | |
APE01748 | 0 | 18 | -4.514222 | hypothetical protein | |
APE01749 | 2 | 45 | -11.038074 | UTP--glucose-1-phosphate uridylyltransferase | |
APE01750 | 3 | 59 | -14.912362 | hypothetical protein | |
APE01752 | 3 | 64 | -16.453453 | hypothetical protein | |
APE01753 | 4 | 76 | -20.355349 | hypothetical protein | |
APE01754 | 3 | 83 | -22.131578 | putative low molecular weight | |
APE01755 | 3 | 83 | -22.141234 | Putative tyrosine-protein kinase in cps region | |
APE01756 | 3 | 83 | -21.947516 | hypothetical protein | |
APE01757 | 5 | 81 | -20.421275 | Undecaprenyl phosphate | |
APE01758 | 6 | 86 | -21.596462 | hypothetical protein | |
APE01759 | 7 | 88 | -22.220532 | dTDP-glucose 4,6-dehydratase 2 | |
APE01760 | 8 | 86 | -23.984516 | dTDP-glucose 4,6-dehydratase 2 | |
APE01761 | 6 | 86 | -24.707582 | Glucose-1-phosphate thymidylyltransferase 2 | |
APE01762 | 8 | 86 | -26.063911 | dTDP-4-dehydrorhamnose 3,5-epimerase | |
APE01763 | 8 | 88 | -27.093203 | dTDP-4-dehydrorhamnose reductase | |
APE01764 | 7 | 85 | -27.943402 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate | |
APE01765 | 7 | 83 | -27.535316 | Putative O-antigen transporter | |
APE01766 | 8 | 81 | -26.774103 | hypothetical protein | |
APE01767 | 5 | 60 | -19.836008 | hypothetical protein | |
APE01768 | 3 | 48 | -15.960914 | hypothetical protein | |
APE01769 | 3 | 44 | -14.504527 | hypothetical protein | |
APE01770 | 3 | 44 | -13.923141 | hypothetical protein | |
APE01771 | 3 | 41 | -13.061741 | hypothetical protein | |
APE01772 | 2 | 41 | -12.996094 | 6-phosphogluconate dehydrogenase, | |
APE01773 | 0 | 47 | -15.306832 | UDP-glucose 6-dehydrogenase | |
APE01774 | 1 | 57 | -17.574738 | UDP-glucose 4-epimerase | |
APE01775 | 2 | 57 | -18.044072 | UDP-N-acetylglucosamine 4-epimerase | |
APE01776 | 1 | 59 | -17.983072 | UDP-N-acetylglucosamine 4-epimerase | |
APE01777 | 1 | 66 | -19.824710 | hypothetical protein | |
APE01778 | 2 | 68 | -20.012181 | hypothetical protein | |
APE01779 | 1 | 61 | -17.678971 | hypothetical protein | |
APE01780 | 1 | 48 | -12.223329 | hypothetical protein | |
APE01781 | 1 | 44 | -10.505404 | Vitamin B12 import ATP-binding protein BtuD | |
APE01782 | 0 | 39 | -7.925261 | N, | |
APE01783 | 5 | 26 | -3.089130 | hypothetical protein | |
APE01784 | 5 | 23 | -1.806143 | IS3 family transposase IS2 | |
APE01785 | 3 | 17 | -0.365159 | IS66 family transposase ISKox1 | |
APE01786 | 1 | 16 | 0.750988 | hypothetical protein | |
APE01787 | 2 | 20 | 1.468843 | hypothetical protein | |
APE01788 | 1 | 23 | 2.569317 | Histidine biosynthesis bifunctional protein | |
APE01789 | 0 | 24 | 3.719727 | Imidazole glycerol phosphate synthase subunit | |
APE01790 | -1 | 24 | 3.539551 | 1-(5-phosphoribosyl)-5-[(5- | |
APE01791 | -1 | 23 | 3.427365 | Imidazole glycerol phosphate synthase subunit | |
APE01792 | -1 | 19 | 3.897169 | Histidine biosynthesis bifunctional protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01730 | HTHFIS | 76 | 4e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01731 | BCTERIALGSPF | 35 | 4e-04 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01732 | TCRTETB | 123 | 5e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01733 | ACRIFLAVINRP | 890 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01734 | ACRIFLAVINRP | 899 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01735 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01740 | HTHFIS | 66 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01743 | SHAPEPROTEIN | 46 | 1e-07 | Bacterial cell shape determinant MreB/Mbl protein s... | |
>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01755 | GPOSANCHOR | 37 | 2e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01759 | NUCEPIMERASE | 150 | 6e-46 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01760 | NUCEPIMERASE | 34 | 7e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01763 | NUCEPIMERASE | 54 | 2e-10 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01774 | NUCEPIMERASE | 279 | 6e-98 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01775 | NUCEPIMERASE | 299 | e-105 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01776 | NUCEPIMERASE | 585 | 0.0 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01779 | GPOSANCHOR | 29 | 0.047 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01785 | GPOSANCHOR | 35 | 6e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
28 | APE01805 | APE01816 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01805 | 3 | 17 | 3.325646 | DNA gyrase inhibitor | |
APE01806 | 4 | 16 | 3.803876 | Inner membrane protein YeeA | |
APE01807 | 3 | 14 | 3.723324 | hypothetical protein | |
APE01808 | 3 | 15 | 5.156956 | Adenosylcobinamide-GDP ribazoletransferase | |
APE01809 | 2 | 15 | 5.557116 | Nicotinate-nucleotide--dimethylbenzimidazole | |
APE01810 | -1 | 15 | 4.265560 | Adenosylhomocysteinase | |
APE01811 | -1 | 15 | 3.105665 | hypothetical protein | |
APE01812 | 0 | 14 | 1.052926 | hypothetical protein | |
APE01813 | 0 | 12 | 0.382647 | HTH-type transcriptional regulator DmlR | |
APE01814 | 1 | 14 | -1.139879 | hypothetical protein | |
APE01815 | 1 | 15 | -3.509546 | Fosfomycin resistance protein AbaF | |
APE01816 | 1 | 17 | -3.238579 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01807 | FbpA_PF05833 | 28 | 0.011 | Fibronectin-binding protein | |
>FbpA_PF05833#Fibronectin-binding protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01815 | TCRTETB | 30 | 0.021 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
29 | APE01851 | APE01857 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01851 | -1 | 22 | -3.701132 | Inner membrane protein YedI | |
APE01852 | -1 | 22 | -4.252905 | putative diguanylate cyclase DgcQ | |
APE01853 | 0 | 18 | -4.183478 | putative diguanylate cyclase DgcQ | |
APE01855 | 1 | 22 | -5.884597 | hypothetical protein | |
APE01856 | 2 | 20 | -5.732545 | Protein DsrB | |
APE01857 | 1 | 20 | -5.322901 | Transcriptional regulatory protein RcsA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01851 | TCRTETOQM | 29 | 0.018 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family |
30 | APE01970 | APE01993 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01970 | 1 | 19 | -4.090313 | Cell division topological specificity factor | |
APE01971 | 0 | 20 | -3.549572 | Septum site-determining protein MinD | |
APE01972 | 0 | 20 | -3.180181 | Septum site-determining protein MinC | |
APE01973 | 4 | 18 | -1.991255 | Protein YcgL | |
APE01974 | 3 | 15 | 0.101875 | putative protein YcgM | |
APE01975 | 1 | 15 | -0.158921 | hypothetical protein | |
APE01976 | 0 | 14 | -0.390876 | hypothetical protein | |
APE01977 | 0 | 14 | -1.103371 | putative protein YeaR | |
APE01978 | -1 | 14 | 0.320215 | Disulfide bond formation protein B | |
APE01979 | -1 | 16 | 1.501733 | Na(+)/H(+) antiporter NhaB | |
APE01980 | -1 | 14 | 1.613184 | Fatty acid metabolism regulator protein | |
APE01981 | 0 | 18 | 2.531703 | hypothetical protein | |
APE01982 | 0 | 19 | 3.518946 | hypothetical protein | |
APE01983 | 1 | 20 | 5.015930 | D-amino acid dehydrogenase | |
APE01984 | 1 | 20 | 4.847988 | Alanine racemase, catabolic | |
APE01985 | 0 | 17 | 4.152781 | K(+)/H(+) antiporter NhaP2 | |
APE01986 | -1 | 17 | 3.847202 | K(+)/H(+) antiporter NhaP2 | |
APE01987 | 1 | 18 | 3.477339 | Murein tetrapeptide carboxypeptidase | |
APE01988 | 0 | 17 | 3.115669 | Murein tetrapeptide carboxypeptidase | |
APE01989 | 1 | 16 | 2.856036 | Endo-type membrane-bound lytic murein | |
APE01990 | 0 | 17 | 2.630761 | Ferrichrome outer membrane transporter/phage | |
APE01991 | 0 | 16 | 2.448361 | Periplasmic trehalase | |
APE01992 | 2 | 17 | 2.508316 | hypothetical protein | |
APE01993 | 3 | 18 | 3.253967 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01984 | ALARACEMASE | 538 | 0.0 | Alanine racemase signature. | |
>ALARACEMASE#Alanine racemase signature. |
31 | APE02003 | APE02047 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02003 | 1 | 21 | 3.498678 | Propionate kinase | |
APE02004 | 1 | 22 | 3.217270 | PFL-like enzyme TdcE | |
APE02005 | 1 | 20 | 1.677347 | Leu/Ile/Val/Thr-binding protein | |
APE02006 | 0 | 16 | 1.525769 | High-affinity branched-chain amino acid | |
APE02007 | -1 | 14 | 1.225943 | hypothetical protein | |
APE02008 | 1 | 14 | 1.442426 | Glutamine transport ATP-binding protein GlnQ | |
APE02009 | -1 | 14 | 1.576166 | High-affinity branched-chain amino acid | |
APE02010 | -3 | 13 | 1.852635 | HTH-type transcriptional regulator YjiE | |
APE02011 | -1 | 14 | 3.302616 | Phosphoenolpyruvate carboxykinase (ATP) | |
APE02012 | -2 | 17 | 2.369263 | hypothetical protein | |
APE02013 | -2 | 18 | 3.009087 | PCP degradation transcriptional activation | |
APE02014 | -2 | 18 | 1.852670 | Proline/betaine transporter | |
APE02015 | -2 | 20 | 1.763599 | Aconitate isomerase | |
APE02016 | -1 | 14 | 1.769987 | HTH-type transcriptional regulator CynR | |
APE02017 | 0 | 12 | 2.200626 | hypothetical protein | |
APE02018 | 2 | 14 | 4.918180 | Dual-specificity RNA pseudouridine synthase | |
APE02019 | 1 | 14 | 4.612476 | hypothetical protein | |
APE02020 | 0 | 16 | 2.746617 | hypothetical protein | |
APE02021 | -1 | 18 | 0.573551 | hypothetical protein | |
APE02022 | 0 | 24 | -2.066008 | hypothetical protein | |
APE02023 | 1 | 27 | -4.220810 | hypothetical protein | |
APE02024 | 2 | 33 | -7.643104 | Outer membrane protein A | |
APE02025 | 2 | 40 | -10.100460 | hypothetical protein | |
APE02026 | 8 | 63 | -15.102754 | hypothetical protein | |
APE02027 | 6 | 63 | -16.300188 | hypothetical protein | |
APE02028 | 6 | 65 | -16.643107 | hypothetical protein | |
APE02029 | 6 | 66 | -16.811503 | hypothetical protein | |
APE02030 | 6 | 64 | -15.938045 | hypothetical protein | |
APE02031 | 8 | 61 | -14.012494 | hypothetical protein | |
APE02032 | 8 | 66 | -18.288492 | hypothetical protein | |
APE02033 | 11 | 65 | -19.002024 | hypothetical protein | |
APE02034 | 10 | 56 | -17.324323 | hypothetical protein | |
APE02035 | 11 | 61 | -16.866725 | hypothetical protein | |
APE02036 | 11 | 61 | -16.273333 | hypothetical protein | |
APE02037 | 6 | 50 | -12.621376 | hypothetical protein | |
APE02038 | 6 | 46 | -10.092256 | hypothetical protein | |
APE02039 | 2 | 25 | -3.268325 | hypothetical protein | |
APE02040 | 1 | 24 | -2.406090 | hypothetical protein | |
APE02041 | 1 | 17 | 0.442542 | hypothetical protein | |
APE02042 | 1 | 16 | 0.866663 | hypothetical protein | |
APE02043 | -1 | 13 | 2.129814 | hypothetical protein | |
APE02044 | -2 | 12 | 2.733669 | hypothetical protein | |
APE02045 | -1 | 17 | 1.670499 | hypothetical protein | |
APE02046 | 0 | 16 | 1.889238 | hypothetical protein | |
APE02047 | -1 | 18 | 3.201152 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02003 | ACETATEKNASE | 501 | e-180 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02012 | SACTRNSFRASE | 44 | 3e-08 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02014 | TCRTETA | 38 | 5e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02017 | PF05272 | 29 | 0.011 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02024 | OMPADOMAIN | 102 | 8e-29 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02030 | PF05704 | 28 | 0.024 | Capsular polysaccharide synthesis protein | |
>PF05704#Capsular polysaccharide synthesis protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02031 | PF05272 | 30 | 0.019 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
32 | APE02070 | APE02080 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02070 | 3 | 15 | 1.684396 | Sodium-potassium/proton antiporter ChaA | |
APE02071 | 3 | 17 | 3.738289 | Putative cation transport regulator ChaB | |
APE02072 | 4 | 16 | 4.691990 | Glutathione-specific | |
APE02073 | 4 | 15 | 4.475774 | hypothetical protein | |
APE02074 | 1 | 15 | 5.441244 | Protein YchN | |
APE02075 | 0 | 15 | 5.533056 | Nitrate regulatory protein | |
APE02076 | 0 | 17 | 6.604962 | Nitrate/nitrite binding protein NrtA | |
APE02077 | 0 | 16 | 5.927713 | Bicarbonate transport system permease protein | |
APE02078 | 0 | 16 | 5.550350 | Nitrate import ATP-binding protein NrtD | |
APE02079 | -1 | 14 | 5.041405 | Nitric oxide reductase FlRd-NAD(+) reductase | |
APE02080 | -2 | 12 | 3.840453 | hypothetical protein |
33 | APE02091 | APE02127 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02091 | -2 | 26 | -4.500796 | HTH-type transcriptional regulator LrpC | |
APE02097 | -2 | 28 | -5.506756 | **Formyltetrahydrofolate deformylase | |
APE02098 | 0 | 33 | -6.078832 | hypothetical protein | |
APE02099 | -1 | 32 | -5.960334 | putative NTE family protein | |
APE02100 | 0 | 28 | -5.326885 | putative NTE family protein | |
APE02101 | 0 | 27 | -5.501072 | Regulator of RpoS | |
APE02102 | 1 | 28 | -5.349559 | UTP--glucose-1-phosphate uridylyltransferase | |
APE02103 | 2 | 27 | -4.958124 | DNA-binding protein H-NS | |
APE02104 | 1 | 23 | -4.374593 | Thymidine kinase | |
APE02105 | 1 | 23 | -3.703645 | Aldehyde-alcohol dehydrogenase | |
APE02106 | -1 | 11 | -2.949270 | hypothetical protein | |
APE02107 | -2 | 11 | -2.554630 | Periplasmic oligopeptide-binding protein | |
APE02108 | -1 | 12 | -2.253783 | Periplasmic oligopeptide-binding protein | |
APE02109 | -1 | 14 | -2.196542 | Oligopeptide transport system permease protein | |
APE02110 | 0 | 12 | -1.710350 | Oligopeptide transport system permease protein | |
APE02111 | 0 | 12 | -2.074878 | Oligopeptide transport ATP-binding protein OppD | |
APE02112 | 0 | 13 | -3.903848 | Vitamin B12 import ATP-binding protein BtuD | |
APE02113 | 0 | 15 | -4.382059 | hypothetical protein | |
APE02114 | 0 | 15 | -3.139254 | hypothetical protein | |
APE02115 | -1 | 16 | -2.741108 | Cardiolipin synthase A | |
APE02116 | 1 | 22 | -3.346078 | hypothetical protein | |
APE02117 | 0 | 17 | -1.585838 | Protein YceI | |
APE02118 | 0 | 15 | -0.359702 | Protein YciI | |
APE02119 | -1 | 16 | -0.386190 | Protein TonB | |
APE02120 | -1 | 16 | -3.164050 | putative ketoamine kinase | |
APE02121 | 0 | 18 | -4.055211 | hypothetical protein | |
APE02122 | 0 | 19 | -4.543328 | ATP-dependent 6-phosphofructokinase isozyme 2 | |
APE02123 | 1 | 26 | -7.057914 | hypothetical protein | |
APE02124 | 2 | 29 | -6.311678 | hypothetical protein | |
APE02125 | 2 | 24 | -3.797365 | Threonine--tRNA ligase | |
APE02126 | 4 | 23 | -2.735102 | Translation initiation factor IF-3 | |
APE02127 | 3 | 22 | -2.094211 | 50S ribosomal protein L35 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02098 | SECA | 58 | 1e-12 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02101 | HTHFIS | 88 | 3e-21 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02108 | FLGHOOKAP1 | 29 | 0.018 | Flagellar hook-associated protein signature. | |
>FLGHOOKAP1#Flagellar hook-associated protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02112 | HTHFIS | 31 | 0.008 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02119 | TONBPROTEIN | 221 | 1e-74 | Gram-negative bacterial tonB protein signature. | |
>TONBPROTEIN#Gram-negative bacterial tonB protein signature. |
34 | APE02153 | APE02169 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02153 | 1 | 19 | -4.582495 | 1,4-dihydroxy-2-naphthoyl-CoA hydrolase | |
APE02154 | 2 | 18 | -2.022704 | hypothetical protein | |
APE02155 | 0 | 16 | -1.067196 | hypothetical protein | |
APE02156 | 0 | 15 | -0.131347 | hypothetical protein | |
APE02157 | -1 | 15 | 0.465521 | hypothetical protein | |
APE02158 | 1 | 14 | 2.303931 | 2-hydroxypropyl-CoM lyase | |
APE02159 | 0 | 16 | 3.430647 | Multidrug resistance protein MdtH | |
APE02160 | 0 | 15 | 3.453985 | Fe(3+) dicitrate transport ATP-binding protein | |
APE02161 | 0 | 15 | 3.272063 | Hemin transport system permease protein HmuU | |
APE02162 | 0 | 17 | 4.796071 | hypothetical protein | |
APE02163 | 1 | 18 | 4.797585 | hypothetical protein | |
APE02164 | 0 | 16 | 5.432889 | HTH-type transcriptional regulator HdfR | |
APE02165 | 1 | 16 | 5.315535 | hypothetical protein | |
APE02166 | 2 | 17 | 4.988551 | hypothetical protein | |
APE02167 | 2 | 18 | 5.257426 | Multidrug resistance protein MdtA | |
APE02168 | 3 | 18 | 3.276377 | hypothetical protein | |
APE02169 | 2 | 16 | 2.159952 | Nickel and cobalt resistance protein CnrA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02154 | HTHTETR | 27 | 0.005 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02159 | TCRTETA | 66 | 5e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02160 | PF05272 | 28 | 0.030 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02165 | NUCEPIMERASE | 37 | 6e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02166 | HTHTETR | 70 | 4e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02167 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02168 | ACRIFLAVINRP | 75 | 2e-18 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02169 | ACRIFLAVINRP | 354 | e-110 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
35 | APE02183 | APE02215 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02183 | 0 | 19 | 4.074918 | Fumarase D | |
APE02184 | 1 | 19 | 4.981592 | HTH-type transcriptional repressor NicS | |
APE02185 | 1 | 20 | 6.018328 | hypothetical protein | |
APE02186 | 3 | 21 | 6.108587 | D-galactonate transporter | |
APE02187 | 3 | 19 | 6.441188 | Quinate/shikimate dehydrogenase | |
APE02188 | 1 | 18 | 6.265284 | hypothetical protein | |
APE02189 | 0 | 18 | 5.563283 | putative ABC transporter ATP-binding protein | |
APE02190 | -2 | 19 | 5.160183 | putative ABC transporter permease protein | |
APE02191 | -2 | 19 | 4.325992 | hypothetical protein | |
APE02192 | -2 | 19 | 4.823016 | hypothetical protein | |
APE02193 | -1 | 18 | 4.751274 | hypothetical protein | |
APE02194 | 0 | 18 | 4.748824 | 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic | |
APE02195 | 1 | 19 | 5.646986 | 2,3-dihydroxyphenylpropionate/2, | |
APE02196 | 2 | 18 | 5.407698 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- | |
APE02197 | 1 | 17 | 6.710153 | 2-keto-4-pentenoate hydratase | |
APE02198 | 1 | 16 | 6.383373 | Acetaldehyde dehydrogenase | |
APE02199 | 3 | 17 | 6.886801 | 4-hydroxy-2-oxovalerate aldolase | |
APE02200 | 2 | 17 | 7.427662 | 3-(3-hydroxy-phenyl)propionate transporter | |
APE02201 | 2 | 19 | 7.094928 | hypothetical protein | |
APE02202 | 0 | 18 | 7.132423 | Thiosulfate sulfurtransferase GlpE | |
APE02203 | 0 | 17 | 5.942066 | 3-mercaptopropionate dioxygenase | |
APE02204 | 1 | 18 | 6.432984 | HTH-type transcriptional regulator GltC | |
APE02205 | 1 | 19 | 6.280085 | Methanesulfonate monooxygenase | |
APE02206 | 2 | 18 | 5.892740 | Putative acyl-CoA dehydrogenase YdbM | |
APE02207 | -1 | 16 | 3.351965 | Putative aliphatic sulfonates-binding protein | |
APE02208 | -1 | 14 | 2.873738 | hypothetical protein | |
APE02209 | 0 | 15 | 4.265093 | hypothetical protein | |
APE02210 | 0 | 17 | 4.825528 | Vitamin B12 import ATP-binding protein BtuD | |
APE02211 | 0 | 16 | 4.555740 | Aliphatic sulfonates import ATP-binding protein | |
APE02212 | 0 | 16 | 4.583415 | Metal-pseudopaline receptor CntO | |
APE02213 | 1 | 18 | 6.653310 | putative siderophore transport system | |
APE02214 | -1 | 19 | 5.774523 | putative siderophore transport system permease | |
APE02215 | -2 | 18 | 3.663918 | Iron-uptake system permease protein FeuC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02184 | HTHTETR | 66 | 2e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02186 | TCRTETA | 48 | 6e-08 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02197 | PF06438 | 28 | 0.042 | Heme acquisition protein HasAp | |
>PF06438#Heme acquisition protein HasAp | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02200 | TCRTETB | 49 | 2e-08 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02210 | PF05272 | 29 | 0.005 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
36 | APE02224 | APE02289 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02224 | -1 | 14 | 3.235965 | Multidrug resistance protein MdtM | |
APE02225 | -2 | 16 | 3.259723 | hypothetical protein | |
APE02226 | -2 | 17 | 3.451274 | putative MFS-type transporter YcaD | |
APE02227 | -2 | 16 | 3.398684 | Hippurate hydrolase | |
APE02228 | -2 | 16 | 2.812418 | Formate dehydrogenase H | |
APE02229 | -1 | 14 | 2.388224 | Hydroxycarboxylate dehydrogenase B | |
APE02230 | 0 | 15 | 1.398134 | hypothetical protein | |
APE02231 | -1 | 18 | 2.823777 | hypothetical protein | |
APE02232 | 0 | 18 | 3.207280 | Spermidine/putrescine import ATP-binding protein | |
APE02233 | 0 | 19 | 3.794471 | hypothetical protein | |
APE02234 | 0 | 21 | 4.286500 | Gluconate 2-dehydrogenase subunit 3 | |
APE02235 | 0 | 22 | 4.801631 | Gluconate 2-dehydrogenase flavoprotein | |
APE02236 | 1 | 22 | 5.889763 | Gluconate 2-dehydrogenase flavoprotein | |
APE02237 | 2 | 23 | 5.951274 | Gluconate 2-dehydrogenase cytochrome c subunit | |
APE02238 | 4 | 23 | 6.372054 | Heme exporter protein B | |
APE02239 | 3 | 22 | 5.249325 | Heme exporter protein C | |
APE02240 | 3 | 21 | 5.790139 | Heme exporter protein D | |
APE02241 | 2 | 14 | 3.485149 | Cytochrome c-type biogenesis protein CcmE | |
APE02242 | 0 | 12 | -0.977936 | Cytochrome c-type biogenesis protein CcmF | |
APE02243 | 1 | 31 | -6.866472 | Thiol:disulfide interchange protein DsbE | |
APE02244 | 1 | 37 | -9.048726 | hypothetical protein | |
APE02245 | 1 | 45 | -11.978019 | hypothetical protein | |
APE02246 | 4 | 57 | -16.619940 | hypothetical protein | |
APE02247 | 3 | 53 | -13.763141 | hypothetical protein | |
APE02248 | 3 | 52 | -12.819429 | Sensor protein RstB | |
APE02249 | 3 | 52 | -12.645978 | Alkaline phosphatase synthesis transcriptional | |
APE02250 | 1 | 46 | -10.943060 | hypothetical protein | |
APE02251 | 0 | 31 | -6.435882 | hypothetical protein | |
APE02252 | 0 | 24 | -4.654392 | Multidrug efflux pump subunit AcrB | |
APE02253 | -1 | 14 | 0.193893 | hypothetical protein | |
APE02254 | -1 | 18 | 2.952089 | hypothetical protein | |
APE02255 | -1 | 21 | 3.847383 | Diacetyl reductase [(S)-acetoin forming] | |
APE02256 | 0 | 20 | 4.282765 | Acetolactate synthase, catabolic | |
APE02257 | 1 | 23 | 5.045729 | Alpha-acetolactate decarboxylase | |
APE02258 | 1 | 24 | 6.529505 | HTH-type transcriptional regulator BenM | |
APE02259 | 0 | 23 | 6.846993 | D-beta-hydroxybutyrate dehydrogenase | |
APE02260 | -1 | 21 | 6.652055 | hypothetical protein | |
APE02261 | -1 | 20 | 6.306465 | hypothetical protein | |
APE02262 | 0 | 21 | 6.440948 | 3-hydroxybutyryl-CoA dehydrogenase | |
APE02263 | 0 | 16 | 2.270347 | Acetyl-CoA acetyltransferase | |
APE02264 | -1 | 13 | 0.390325 | putative succinyl-CoA:3-ketoacid coenzyme A | |
APE02265 | -1 | 13 | 1.398701 | putative succinyl-CoA:3-ketoacid coenzyme A | |
APE02266 | -1 | 15 | 0.933799 | HTH-type transcriptional regulator CynR | |
APE02267 | -3 | 14 | 0.999968 | hypothetical protein | |
APE02268 | -2 | 14 | 1.070655 | hypothetical protein | |
APE02269 | 0 | 16 | 3.644573 | hypothetical protein | |
APE02270 | -1 | 17 | 3.524729 | hypothetical protein | |
APE02271 | 0 | 21 | 2.888211 | Riboflavin transport system permease protein | |
APE02272 | 0 | 20 | 4.996973 | Vitamin B12 import ATP-binding protein BtuD | |
APE02273 | 0 | 16 | 4.162921 | hypothetical protein | |
APE02274 | 1 | 16 | 3.943749 | hypothetical protein | |
APE02275 | 1 | 16 | 3.809668 | Creatinine amidohydrolase | |
APE02276 | 1 | 16 | 3.515707 | Putative aminoacrylate peracid reductase RutC | |
APE02277 | 1 | 16 | 4.668879 | Pterin deaminase | |
APE02278 | 1 | 17 | 3.059203 | Carnitine monooxygenase reductase subunit | |
APE02279 | 2 | 16 | 1.258292 | HTH-type transcriptional regulator HdfR | |
APE02281 | 1 | 18 | 1.225247 | hypothetical protein | |
APE02282 | 1 | 17 | 1.390145 | Riboflavin-binding protein RibY | |
APE02283 | 1 | 17 | 1.476993 | Isoxanthopterin deaminase | |
APE02284 | 0 | 20 | -1.483409 | Validamycin A dioxygenase | |
APE02285 | 0 | 20 | -2.541984 | hypothetical protein | |
APE02286 | -1 | 16 | 1.269999 | HTH-type transcriptional regulator DmlR | |
APE02287 | 0 | 16 | 3.336354 | Drug efflux pump JefA | |
APE02288 | 2 | 15 | 3.607741 | hypothetical protein | |
APE02289 | 2 | 16 | 3.148896 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02224 | TCRTETA | 51 | 4e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02226 | TCRTETA | 31 | 0.006 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02232 | PF05272 | 28 | 0.044 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02249 | HTHFIS | 78 | 7e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02252 | ACRIFLAVINRP | 1059 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02255 | DHBDHDRGNASE | 99 | 3e-27 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02259 | DHBDHDRGNASE | 115 | 4e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02261 | ABC2TRNSPORT | 30 | 0.014 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02272 | PF05272 | 29 | 0.023 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02283 | FERRIBNDNGPP | 32 | 0.003 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02287 | TCRTETB | 58 | 9e-13 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02288 | TCRTETB | 29 | 0.007 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
37 | APE02298 | APE02306 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02298 | 0 | 15 | -3.532398 | Glycerol-3-phosphate regulon repressor | |
APE02299 | 2 | 17 | -4.369100 | Threonine efflux protein | |
APE02300 | -1 | 21 | -3.642390 | Carbonic anhydrase 1 | |
APE02301 | 0 | 24 | -2.331772 | hypothetical protein | |
APE02302 | 0 | 22 | 0.014587 | hypothetical protein | |
APE02303 | 1 | 19 | 2.412163 | hypothetical protein | |
APE02304 | 0 | 20 | 4.106529 | hypothetical protein | |
APE02305 | 1 | 18 | 3.972107 | hypothetical protein | |
APE02306 | 0 | 15 | 3.088739 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02298 | ARGREPRESSOR | 30 | 0.004 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. |
38 | APE02337 | APE02349 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02337 | -1 | 18 | -3.345254 | hypothetical protein | |
APE02338 | -2 | 16 | -2.832637 | Transcriptional regulator SlyA | |
APE02339 | -1 | 15 | -2.856562 | putative diguanylate cyclase DgcT | |
APE02340 | -1 | 14 | -0.789326 | Outer membrane lipoprotein SlyB | |
APE02341 | -1 | 13 | -0.977860 | Anhydro-N-acetylmuramic acid kinase | |
APE02342 | 0 | 14 | -2.015817 | Membrane-bound lysozyme inhibitor of C-type | |
APE02343 | -1 | 17 | -2.048319 | Pyridoxine/pyridoxamine 5'-phosphate oxidase | |
APE02344 | -1 | 18 | -3.360632 | Tyrosine--tRNA ligase | |
APE02345 | 0 | 15 | -3.030207 | Pyridoxal kinase PdxY | |
APE02346 | 1 | 17 | -3.674823 | Glutathione S-transferase GstA | |
APE02347 | 0 | 16 | -3.401115 | hypothetical protein | |
APE02348 | 1 | 16 | -2.191386 | Dipeptide and tripeptide permease A | |
APE02349 | 2 | 15 | 1.882963 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02348 | TCRTETB | 38 | 7e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
39 | APE02423 | APE02440 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02423 | -2 | 14 | 3.348835 | putative lipoprotein YgdR | |
APE02424 | -2 | 13 | 2.774905 | L-asparagine permease 2 | |
APE02425 | 0 | 15 | 3.251429 | HTH-type transcriptional regulator PgrR | |
APE02426 | 0 | 15 | 2.800879 | hypothetical protein | |
APE02427 | 0 | 14 | 2.887979 | hypothetical protein | |
APE02428 | -1 | 16 | 1.960635 | N-acetylcysteine deacetylase | |
APE02429 | -1 | 14 | 0.946797 | Putative monooxygenase MoxC | |
APE02430 | 0 | 17 | 2.895097 | hypothetical protein | |
APE02431 | 2 | 16 | 3.776039 | hypothetical protein | |
APE02432 | 2 | 16 | 3.571178 | hypothetical protein | |
APE02433 | 0 | 18 | 3.379682 | hypothetical protein | |
APE02434 | 0 | 17 | 3.729641 | Glutamine transport ATP-binding protein GlnQ | |
APE02435 | -2 | 17 | 4.851834 | hypothetical protein | |
APE02436 | -2 | 19 | 4.098482 | hypothetical protein | |
APE02437 | 0 | 16 | 5.217745 | Tautomerase PptA | |
APE02438 | 0 | 15 | 5.220835 | hypothetical protein | |
APE02439 | 1 | 14 | 4.674961 | hypothetical protein | |
APE02440 | 0 | 14 | 4.259944 | Diacetylchitobiose uptake system ATP-binding |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02439 | ARGDEIMINASE | 26 | 0.044 | Bacterial arginine deiminase signature. | |
>ARGDEIMINASE#Bacterial arginine deiminase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02440 | PF05272 | 30 | 0.007 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
40 | APE02464 | APE02474 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02464 | 2 | 16 | -1.230333 | Formate dehydrogenase, nitrate-inducible, major | |
APE02465 | 0 | 15 | -0.894456 | Formate dehydrogenase, nitrate-inducible, | |
APE02466 | 0 | 17 | 1.076372 | Formate dehydrogenase, nitrate-inducible, | |
APE02467 | -1 | 16 | 3.621769 | Polyphosphate:ADP phosphotransferase 3 | |
APE02468 | -2 | 17 | 4.925556 | hypothetical protein | |
APE02469 | -2 | 16 | 5.430667 | hypothetical protein | |
APE02470 | -1 | 15 | 5.400004 | hypothetical protein | |
APE02471 | -2 | 13 | 5.131871 | hypothetical protein | |
APE02472 | -2 | 13 | 4.351101 | Alkanal monooxygenase alpha chain | |
APE02473 | -1 | 13 | 3.552900 | Glutathione import ATP-binding protein GsiA | |
APE02474 | 0 | 11 | 3.087739 | hypothetical protein |
41 | APE02493 | APE02498 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02493 | 2 | 18 | -1.664069 | Trehalose synthase/amylase TreS | |
APE02494 | 2 | 21 | -3.092558 | hypothetical protein | |
APE02495 | 3 | 23 | -3.634468 | 3-phenylpropionate-dihydrodiol/cinnamic | |
APE02496 | 2 | 25 | -6.709977 | hypothetical protein | |
APE02497 | 2 | 20 | -2.649439 | hypothetical protein | |
APE02498 | 2 | 19 | 0.688548 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02495 | DHBDHDRGNASE | 65 | 3e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
42 | APE02515 | APE02547 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02515 | 2 | 18 | 1.476419 | HTH-type transcriptional regulator DmlR | |
APE02516 | 1 | 13 | 4.744672 | hypothetical protein | |
APE02517 | 0 | 12 | 4.591625 | hypothetical protein | |
APE02518 | 0 | 12 | 4.559702 | hypothetical protein | |
APE02519 | 0 | 13 | 4.525012 | Peptidoglycan D,D-transpeptidase MrdA | |
APE02520 | 1 | 13 | 5.398982 | Gamma-glutamyl-L-1-hydroxyisopropylamide | |
APE02521 | 1 | 13 | 4.326722 | hypothetical protein | |
APE02522 | 0 | 13 | 1.775815 | PqqA peptide cyclase | |
APE02523 | 1 | 14 | 1.638297 | PqqA binding protein | |
APE02524 | 2 | 14 | 2.791786 | Pyrroloquinoline-quinone synthase | |
APE02525 | 2 | 14 | 3.362622 | Coenzyme PQQ synthesis protein B | |
APE02526 | 2 | 16 | 3.757300 | hypothetical protein | |
APE02527 | 2 | 16 | 5.201081 | Haloalkane dehalogenase | |
APE02528 | 3 | 15 | 4.787084 | Transcriptional regulatory protein OmpR | |
APE02529 | 0 | 13 | 4.249653 | Sensor histidine kinase RcsC | |
APE02530 | -1 | 14 | 3.088571 | hypothetical protein | |
APE02531 | 0 | 16 | 2.685043 | Thiol-disulfide oxidoreductase ResA | |
APE02532 | 0 | 15 | 2.609204 | HTH-type transcriptional regulator YofA | |
APE02533 | -1 | 16 | 2.996092 | L-2,4-diaminobutyrate decarboxylase | |
APE02534 | -3 | 15 | 3.353548 | Diaminobutyrate--2-oxoglutarate | |
APE02535 | 0 | 13 | 3.967751 | Putative thiamine biosynthesis protein | |
APE02536 | 0 | 14 | 4.900549 | Riboflavin transport system permease protein | |
APE02537 | 1 | 15 | 4.718496 | hypothetical protein | |
APE02538 | 0 | 14 | 4.425701 | Aliphatic sulfonates import ATP-binding protein | |
APE02539 | 0 | 13 | 2.062385 | Aminopyrimidine aminohydrolase | |
APE02541 | 1 | 14 | 1.758414 | hypothetical protein | |
APE02542 | 0 | 16 | 1.376330 | Inositol 2-dehydrogenase/D-chiro-inositol | |
APE02543 | 0 | 16 | 0.326274 | Inosose dehydratase | |
APE02544 | -1 | 16 | -0.858164 | hypothetical protein | |
APE02545 | 2 | 25 | -4.048726 | Diguanylate cyclase DgcM | |
APE02546 | 4 | 28 | -4.870909 | hypothetical protein | |
APE02547 | 2 | 22 | -2.807206 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02528 | HTHFIS | 96 | 4e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
43 | APE02556 | APE02612 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02556 | 2 | 20 | -1.661076 | hypothetical protein | |
APE02557 | 3 | 36 | -4.997553 | hypothetical protein | |
APE02558 | 2 | 40 | -6.931462 | hypothetical protein | |
APE02559 | 1 | 43 | -7.260847 | HTH-type transcriptional regulator NimR | |
APE02560 | 2 | 52 | -10.426360 | hypothetical protein | |
APE02561 | 3 | 52 | -10.749406 | Putative phosphoserine phosphatase 2 | |
APE02562 | -1 | 36 | -6.304247 | Leucine efflux protein | |
APE02563 | 0 | 31 | -5.038618 | hypothetical protein | |
APE02564 | -1 | 25 | -3.100930 | HTH-type transcriptional regulator NimR | |
APE02565 | -1 | 17 | -0.937885 | hypothetical protein | |
APE02566 | 0 | 14 | 2.337628 | hypothetical protein | |
APE02567 | 1 | 12 | 1.459749 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |
APE02568 | 1 | 14 | -0.654077 | Colistin resistance protein EmrB | |
APE02569 | 1 | 14 | -0.477944 | Colistin resistance protein EmrB | |
APE02570 | 1 | 12 | 1.252989 | Colistin resistance protein EmrA | |
APE02571 | 0 | 15 | 0.609651 | hypothetical protein | |
APE02572 | 1 | 14 | 3.366444 | Aspartate-semialdehyde dehydrogenase | |
APE02573 | 2 | 18 | 6.011515 | hypothetical protein | |
APE02574 | 2 | 21 | 6.631163 | hypothetical protein | |
APE02575 | 2 | 20 | 6.215023 | 1-carboxybiuret hydrolase subunit AtzE | |
APE02576 | 2 | 18 | 4.949580 | hypothetical protein | |
APE02577 | 1 | 18 | 4.375620 | Oxamate amidohydrolase proenzyme | |
APE02578 | 2 | 20 | 2.748799 | hypothetical protein | |
APE02579 | 2 | 19 | 4.271521 | L-cystine-binding protein FliY | |
APE02580 | 2 | 18 | 4.802564 | hypothetical protein | |
APE02581 | 2 | 18 | 4.586063 | L-cystine transport system permease protein | |
APE02582 | 1 | 17 | 4.112896 | Glutamine transport ATP-binding protein GlnQ | |
APE02583 | 0 | 17 | 4.849095 | (S)-ureidoglycine--glyoxylate transaminase | |
APE02584 | 0 | 15 | 4.843639 | N-carbamoyl-L-amino acid hydrolase | |
APE02585 | 0 | 14 | 3.262832 | NADH:quinone reductase | |
APE02586 | 0 | 13 | 2.271091 | HTH-type transcriptional regulator DmlR | |
APE02587 | 0 | 12 | 2.322544 | hypothetical protein | |
APE02588 | -1 | 11 | 2.127536 | NADPH dehydrogenase | |
APE02589 | 0 | 12 | 1.150549 | NADPH dehydrogenase | |
APE02590 | -1 | 14 | -1.109332 | hypothetical protein | |
APE02591 | -1 | 16 | -3.413378 | Putative metabolite transport protein YjhB | |
APE02592 | -1 | 19 | -4.789325 | hypothetical protein | |
APE02593 | -1 | 23 | -5.993881 | hypothetical protein | |
APE02594 | -1 | 26 | -4.943234 | hypothetical protein | |
APE02595 | 1 | 30 | -5.919635 | hypothetical protein | |
APE02596 | 1 | 25 | -3.754267 | Major exported protein | |
APE02597 | 0 | 24 | -3.806435 | hypothetical protein | |
APE02598 | 0 | 28 | -5.196059 | hypothetical protein | |
APE02599 | 1 | 32 | -6.489545 | hypothetical protein | |
APE02600 | 1 | 36 | -8.982059 | HTH-type transcriptional regulator GntR | |
APE02601 | 2 | 37 | -10.112556 | hypothetical protein | |
APE02602 | 2 | 38 | -11.347022 | Ascorbate-specific PTS system EIIA component | |
APE02603 | 2 | 37 | -11.075527 | Ascorbate-specific PTS system EIIB component | |
APE02604 | 2 | 34 | -9.192517 | hypothetical protein | |
APE02605 | 1 | 33 | -8.262781 | Ascorbate-specific PTS system EIIC component | |
APE02606 | 2 | 41 | -9.719028 | D-allulose-6-phosphate 3-epimerase | |
APE02607 | 2 | 45 | -9.384006 | PTS system | |
APE02608 | 1 | 45 | -8.314599 | PTS system mannose-specific EIIBCA component | |
APE02609 | 1 | 46 | -8.120344 | PTS system fructose-specific EIIB'BC component | |
APE02610 | -2 | 41 | -6.140625 | Homoserine/homoserine lactone efflux protein | |
APE02611 | -2 | 39 | -5.740908 | hypothetical protein | |
APE02612 | -2 | 32 | -3.952841 | HTH-type transcriptional regulator DmlR |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02568 | TCRTETB | 27 | 0.044 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02569 | TCRTETB | 66 | 3e-14 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02570 | RTXTOXIND | 107 | 4e-28 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02573 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02578 | BCTERIALGSPD | 29 | 0.020 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02582 | PF05272 | 29 | 0.015 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02591 | TCRTETA | 62 | 1e-12 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02594 | HTHTETR | 67 | 3e-16 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02599 | TCRTETA | 44 | 9e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02611 | TCRTETA | 30 | 0.017 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
44 | APE02622 | APE02635 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02622 | 2 | 24 | -3.617767 | Ribose import binding protein RbsB | |
APE02623 | -1 | 20 | -3.309684 | Ribokinase | |
APE02624 | -3 | 20 | -3.605404 | hypothetical protein | |
APE02625 | -2 | 21 | -3.314049 | Aminopyrimidine aminohydrolase | |
APE02626 | -2 | 21 | -3.312170 | hypothetical protein | |
APE02627 | -2 | 20 | -3.283631 | Potassium binding protein Kbp | |
APE02628 | -1 | 22 | -4.328390 | Phosphoglycerate transporter protein | |
APE02629 | -2 | 30 | -4.617274 | Phosphoglycerate transport regulatory protein | |
APE02630 | -1 | 30 | -4.927991 | Phosphoglycerate transport system sensor protein | |
APE02631 | -1 | 32 | -4.307822 | Phosphoglycerate transport system sensor protein | |
APE02632 | 0 | 31 | -4.186218 | C4-dicarboxylate transport transcriptional | |
APE02633 | 0 | 33 | -4.828115 | hypothetical protein | |
APE02634 | 1 | 30 | -3.444888 | HTH-type transcriptional regulator PgrR | |
APE02635 | 1 | 28 | -3.205872 | 1-deoxyxylulose-5-phosphate synthase YajO |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02627 | INTIMIN | 33 | 4e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02628 | TCRTETA | 31 | 0.012 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02629 | FLGMOTORFLIM | 31 | 0.010 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02631 | PF06580 | 28 | 0.011 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02632 | HTHFIS | 227 | 8e-72 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
45 | APE02651 | APE02708 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02651 | 2 | 15 | 1.745838 | Caffeate CoA-transferase | |
APE02652 | 2 | 15 | 1.390145 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02653 | 1 | 17 | 1.376421 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02654 | 1 | 16 | 0.976574 | Acetyl-CoA acetyltransferase | |
APE02655 | 0 | 13 | 1.315064 | Putative tartrate transporter | |
APE02656 | 0 | 17 | -0.055762 | 6-deoxy-6-sulfogluconolactonase | |
APE02657 | 1 | 18 | -0.483911 | hypothetical protein | |
APE02658 | 2 | 19 | -0.005492 | hypothetical protein | |
APE02659 | 2 | 17 | 1.435494 | hypothetical protein | |
APE02660 | 2 | 18 | 2.413480 | Glycerate 2-kinase | |
APE02661 | 1 | 18 | 0.928364 | Carbohydrate diacid regulator | |
APE02662 | 0 | 18 | 1.626379 | hypothetical protein | |
APE02663 | -1 | 17 | 0.951274 | putative 3-hydroxyisobutyrate dehydrogenase | |
APE02664 | -2 | 13 | -0.624977 | HTH-type transcriptional regulator CynR | |
APE02665 | -2 | 12 | -1.947426 | hypothetical protein | |
APE02666 | -2 | 13 | -3.341224 | Mannosyl-D-glycerate transport/metabolism system | |
APE02667 | -2 | 13 | -3.680436 | PTS system maltose-specific EIICB component | |
APE02668 | -2 | 12 | -4.625762 | Maltose-6'-phosphate glucosidase | |
APE02669 | -2 | 17 | -4.189688 | Major myo-inositol transporter IolT | |
APE02670 | -2 | 20 | -4.289036 | hypothetical protein | |
APE02671 | -2 | 19 | -4.538226 | hypothetical protein | |
APE02672 | -3 | 19 | -4.230677 | hypothetical protein | |
APE02673 | -2 | 17 | -3.688849 | hypothetical protein | |
APE02674 | -2 | 16 | -3.831034 | hypothetical protein | |
APE02675 | -2 | 17 | -4.994672 | putative signaling protein | |
APE02676 | -1 | 15 | -1.490713 | hypothetical protein | |
APE02677 | -1 | 14 | 0.053193 | hypothetical protein | |
APE02678 | -1 | 12 | 0.895382 | Methionine aminopeptidase | |
APE02679 | -2 | 12 | 1.581866 | Type-1 fimbrial protein, A chain | |
APE02680 | -1 | 13 | 2.015576 | putative fimbrial chaperone YraI | |
APE02681 | -1 | 13 | 2.724257 | Outer membrane usher protein YraJ | |
APE02682 | -2 | 15 | 3.121424 | Fimbria adhesin protein | |
APE02683 | -2 | 17 | 2.781242 | hypothetical protein | |
APE02684 | -1 | 20 | 2.669001 | Serine/threonine-protein kinase toxin HipA | |
APE02685 | -1 | 18 | 3.743297 | Antitoxin HipB | |
APE02686 | -1 | 19 | 4.398927 | 5-hydroxyisourate hydrolase | |
APE02687 | 1 | 19 | 4.443337 | Uric acid degradation bifunctional protein | |
APE02688 | 3 | 17 | 4.574462 | Xanthine permease XanP | |
APE02689 | 2 | 17 | 4.916032 | Xanthine permease XanQ | |
APE02690 | 2 | 18 | 5.353188 | FAD-dependent urate hydroxylase | |
APE02691 | 3 | 19 | 6.233078 | FAD-dependent urate hydroxylase | |
APE02692 | 2 | 17 | 6.250661 | hypothetical protein | |
APE02693 | 1 | 18 | 6.028594 | HTH-type transcriptional regulator CynR | |
APE02694 | 1 | 18 | 5.437041 | hypothetical protein | |
APE02695 | 0 | 16 | 4.859163 | Methylxanthine N1-demethylase NdmA | |
APE02696 | -1 | 16 | 4.934695 | Phenoxybenzoate dioxygenase subunit beta | |
APE02697 | -1 | 13 | 2.920868 | Purine ribonucleoside efflux pump NepI | |
APE02698 | -1 | 14 | 2.062385 | hypothetical protein | |
APE02699 | -2 | 13 | 1.451790 | hypothetical protein | |
APE02700 | -2 | 13 | 2.373362 | hypothetical protein | |
APE02701 | -2 | 12 | 2.736988 | Validamycin A dioxygenase | |
APE02702 | 0 | 13 | 3.006707 | D-methionine-binding lipoprotein MetQ | |
APE02703 | 2 | 13 | 3.665818 | Methionine import ATP-binding protein MetN 2 | |
APE02704 | 3 | 12 | 3.552900 | D-methionine transport system permease protein | |
APE02705 | 5 | 15 | 3.274835 | Nitronate monooxygenase | |
APE02706 | 3 | 15 | 3.011279 | Nitronate monooxygenase | |
APE02707 | 3 | 14 | 3.014872 | HTH-type transcriptional regulator HdfR | |
APE02708 | 2 | 14 | 2.556591 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02652 | DHBDHDRGNASE | 94 | 3e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02653 | DHBDHDRGNASE | 32 | 6e-05 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02655 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02657 | TCRTETB | 33 | 6e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02659 | TCRTETA | 28 | 0.016 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02661 | DNABINDNGFIS | 29 | 0.012 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02669 | TCRTETA | 41 | 6e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02679 | FIMBRIALPAPE | 32 | 9e-04 | Escherichia coli: P pili tip fibrillum papE protein... | |
>FIMBRIALPAPE#Escherichia coli: P pili tip fibrillum papE protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02681 | PF00577 | 575 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02696 | PF06057 | 29 | 0.019 | Type IV secretory pathway VirJ component | |
>PF06057#Type IV secretory pathway VirJ component | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02697 | TCRTETB | 44 | 6e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02700 | MICOLLPTASE | 26 | 0.026 | Microbial collagenase metalloprotease (M9) signature. | |
>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02708 | TCRTETA | 31 | 0.006 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
46 | APE02720 | APE02727 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02720 | -1 | 16 | 3.919716 | hypothetical protein | |
APE02721 | 0 | 19 | 4.160037 | Glutaminase 2 | |
APE02722 | 0 | 19 | 4.322461 | Succinate semialdehyde dehydrogenase [NAD(P)+] | |
APE02723 | 2 | 17 | 4.149613 | Succinate semialdehyde dehydrogenase [NAD(P)+] | |
APE02724 | 2 | 17 | 4.443337 | HTH-type transcriptional regulator GltR | |
APE02725 | 2 | 15 | 4.259097 | hypothetical protein | |
APE02726 | 2 | 14 | 4.190400 | L-lactate dehydrogenase 1 | |
APE02727 | 0 | 15 | 3.844356 | HTH-type transcriptional repressor GlcR |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02721 | BLACTAMASEA | 35 | 3e-04 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02725 | SACTRNSFRASE | 36 | 2e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
47 | APE02739 | APE02779 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02739 | 2 | 12 | -0.938788 | Sugar efflux transporter | |
APE02740 | 1 | 15 | -2.240729 | hypothetical protein | |
APE02741 | 1 | 15 | -0.183478 | Multiple antibiotic resistance protein MarR | |
APE02742 | 2 | 17 | 0.520959 | Multiple antibiotic resistance protein MarA | |
APE02743 | 4 | 15 | 2.353252 | hypothetical protein | |
APE02744 | 3 | 18 | 3.261456 | putative amino-acid metabolite efflux pump | |
APE02745 | 2 | 17 | 3.752515 | hypothetical protein | |
APE02746 | 3 | 17 | 4.930371 | hypothetical protein | |
APE02747 | 1 | 16 | 3.771135 | hypothetical protein | |
APE02748 | 0 | 15 | 3.554770 | High-affinity branched-chain amino acid | |
APE02749 | 0 | 13 | 3.439220 | High-affinity branched-chain amino acid | |
APE02750 | 0 | 13 | 3.976083 | hypothetical protein | |
APE02751 | -1 | 14 | 3.585531 | hypothetical protein | |
APE02752 | 0 | 16 | 2.463836 | Aliphatic amidase expression-regulating protein | |
APE02753 | 0 | 17 | 3.129492 | hypothetical protein | |
APE02754 | 3 | 19 | 5.177285 | hypothetical protein | |
APE02755 | 1 | 16 | 5.089068 | hypothetical protein | |
APE02756 | 2 | 15 | 4.812454 | hypothetical protein | |
APE02757 | -1 | 14 | 3.474248 | hypothetical protein | |
APE02758 | -2 | 12 | 2.995910 | hypothetical protein | |
APE02759 | -3 | 12 | 3.050313 | Lactose operon repressor | |
APE02760 | -3 | 11 | 2.359596 | Beta-galactosidase | |
APE02761 | -2 | 12 | 0.996236 | Beta-galactosidase | |
APE02762 | -1 | 13 | 0.955572 | Lactose permease | |
APE02763 | -1 | 17 | 2.131078 | hypothetical protein | |
APE02764 | 0 | 16 | 4.168815 | hypothetical protein | |
APE02765 | 0 | 15 | 4.404544 | Beta-lactamase SHV-1 | |
APE02766 | 0 | 16 | 3.494467 | Glycerol-3-phosphate regulon repressor | |
APE02767 | 0 | 15 | 2.823593 | hypothetical protein | |
APE02768 | -1 | 15 | 2.599064 | L-threonate dehydrogenase | |
APE02769 | -2 | 14 | 2.165813 | 3-oxo-tetronate kinase | |
APE02770 | -1 | 19 | -0.410267 | 3-oxo-tetronate 4-phosphate decarboxylase | |
APE02771 | -1 | 23 | -2.686573 | 2-oxo-tetronate isomerase | |
APE02772 | -2 | 22 | -2.301495 | Inner membrane permease YgbN | |
APE02773 | -2 | 19 | -1.062869 | Inner membrane permease YgbN | |
APE02774 | 0 | 24 | -3.493170 | hypothetical protein | |
APE02775 | -1 | 22 | -3.887333 | HTH-type transcriptional activator RhaR | |
APE02776 | 0 | 24 | -2.878640 | hypothetical protein | |
APE02777 | -2 | 27 | -2.176161 | Blue light- and temperature-regulated | |
APE02778 | -1 | 38 | -4.434401 | Nicotinamide-nucleotide amidohydrolase PncC | |
APE02779 | 0 | 42 | -5.909191 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02739 | TCRTETB | 57 | 4e-11 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02745 | TCRTETA | 28 | 0.010 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02746 | TCRTETB | 32 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02747 | TYPE3OMBPROT | 28 | 0.021 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02749 | PF05211 | 28 | 0.039 | Neuraminyllactose-binding hemagglutinin | |
>PF05211#Neuraminyllactose-binding hemagglutinin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02762 | TCRTETA | 41 | 5e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02765 | BLACTAMASEA | 437 | e-159 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. |
48 | APE02799 | APE02818 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02799 | 2 | 11 | 1.788852 | Anaerobic dimethyl sulfoxide reductase chain B | |
APE02800 | 2 | 11 | 1.996745 | Anaerobic dimethyl sulfoxide reductase chain C | |
APE02801 | 1 | 11 | 2.048447 | Tat proofreading chaperone DmsD | |
APE02802 | 1 | 11 | 1.814499 | Voltage-gated ClC-type chloride channel ClcB | |
APE02803 | 0 | 13 | 0.877125 | ATP-dependent dethiobiotin synthetase BioD 1 | |
APE02804 | 0 | 14 | 0.749140 | Protein mlc | |
APE02805 | 0 | 15 | 1.575767 | Hca operon transcriptional activator HcaR | |
APE02806 | 1 | 14 | 1.171508 | Inner membrane transport protein YnfM | |
APE02807 | 2 | 20 | -0.621760 | Thermostable carboxypeptidase 1 | |
APE02808 | 4 | 17 | -2.819435 | hypothetical protein | |
APE02809 | -1 | 10 | -1.052445 | hypothetical protein | |
APE02810 | -1 | 10 | 0.866116 | hypothetical protein | |
APE02811 | -1 | 11 | 0.693297 | Spermidine export protein MdtI | |
APE02812 | -1 | 12 | 1.199090 | Spermidine export protein MdtJ | |
APE02813 | -1 | 14 | 2.581567 | AI-2 transport protein TqsA | |
APE02814 | 0 | 18 | 3.469069 | Acetyl-S-ACP:malonate ACP transferase | |
APE02815 | 1 | 18 | 3.962376 | 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A | |
APE02816 | 1 | 18 | 3.199596 | Malonate decarboxylase acyl carrier protein | |
APE02817 | 1 | 15 | 4.524415 | Malonyl-S-ACP:biotin-protein carboxyltransferase | |
APE02818 | -1 | 13 | 3.536308 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02806 | TCRTETA | 54 | 5e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02810 | V8PROTEASE | 109 | 5e-30 | V8 serine protease family signature. | |
>V8PROTEASE#V8 serine protease family signature. |
49 | APE02834 | APE02843 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02834 | -1 | 12 | 3.181490 | hypothetical protein | |
APE02835 | -1 | 13 | 4.641472 | Fumarate hydratase class I, anaerobic | |
APE02836 | 0 | 13 | 5.104115 | hypothetical protein | |
APE02837 | 0 | 17 | 5.851016 | hypothetical protein | |
APE02838 | 0 | 17 | 6.187798 | 3-oxoadipate enol-lactonase 2 | |
APE02839 | 1 | 18 | 5.942707 | 3-carboxy-cis,cis-muconate cycloisomerase | |
APE02840 | -1 | 17 | 4.353229 | Beta-ketoadipyl-CoA thiolase | |
APE02841 | -1 | 16 | 4.213685 | 3-oxoadipate CoA-transferase subunit B | |
APE02842 | -1 | 14 | 4.350994 | 3-oxoadipate CoA-transferase subunit A | |
APE02843 | -2 | 13 | 3.397953 | Pca regulon regulatory protein |
50 | APE02875 | APE02892 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02875 | 4 | 17 | -0.065412 | Putative selenoprotein YdfZ | |
APE02876 | 5 | 19 | -0.359942 | hypothetical protein | |
APE02877 | 2 | 16 | 0.665374 | hypothetical protein | |
APE02878 | 1 | 12 | 0.821591 | hypothetical protein | |
APE02879 | -1 | 12 | 1.704390 | Putative sulfur carrier protein YedF | |
APE02880 | -1 | 12 | 2.250883 | hypothetical protein | |
APE02881 | 0 | 15 | 2.489736 | hypothetical protein | |
APE02882 | 0 | 16 | 2.889105 | Glyceraldehyde-3-phosphate dehydrogenase | |
APE02883 | 1 | 17 | 4.243251 | Lactaldehyde dehydrogenase | |
APE02884 | 0 | 18 | 4.708422 | Protein YdcF | |
APE02885 | 0 | 18 | 4.129987 | Fosfomycin resistance protein AbaF | |
APE02886 | 1 | 18 | 5.267875 | D-serine/D-alanine/glycine transporter | |
APE02887 | -1 | 17 | 5.258059 | D-serine/D-alanine/glycine transporter | |
APE02888 | 0 | 17 | 5.818698 | Succinylglutamate desuccinylase | |
APE02889 | -1 | 15 | 4.996682 | N-succinylarginine dihydrolase | |
APE02890 | -1 | 13 | 4.186260 | N-succinylglutamate 5-semialdehyde | |
APE02891 | -1 | 10 | 2.674833 | N-succinylglutamate 5-semialdehyde | |
APE02892 | 2 | 15 | -0.074367 | Arginine N-succinyltransferase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02879 | PF01206 | 93 | 4e-29 | SirA family protein | |
>PF01206#SirA family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02885 | TCRTETB | 34 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
51 | APE02910 | APE02924 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02910 | 1 | 13 | 3.585541 | 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA | |
APE02911 | 0 | 13 | 3.031338 | Acyl-coenzyme A thioesterase PaaI | |
APE02912 | 1 | 11 | 3.187322 | 3-hydroxyadipyl-CoA dehydrogenase | |
APE02913 | 1 | 14 | 2.605950 | 1,2-epoxyphenylacetyl-CoA isomerase | |
APE02914 | 0 | 14 | 1.934805 | 2,3-dehydroadipyl-CoA hydratase | |
APE02915 | -2 | 11 | 1.963978 | 1,2-phenylacetyl-CoA epoxidase, subunit E | |
APE02916 | -2 | 12 | 0.632972 | Putative 1,2-phenylacetyl-CoA epoxidase, subunit | |
APE02917 | -1 | 11 | 1.677894 | 1,2-phenylacetyl-CoA epoxidase, subunit C | |
APE02918 | -1 | 10 | 2.518944 | 1,2-phenylacetyl-CoA epoxidase, subunit B | |
APE02919 | -1 | 11 | 3.390128 | 1,2-phenylacetyl-CoA epoxidase, subunit A | |
APE02920 | -1 | 10 | 3.659823 | Bifunctional protein PaaZ | |
APE02921 | -1 | 12 | 3.915831 | Primary amine oxidase | |
APE02922 | 0 | 17 | 6.144644 | hypothetical protein | |
APE02923 | 0 | 16 | 5.047989 | 2-dehydropantoate 2-reductase | |
APE02924 | 0 | 15 | 4.239344 | Phenylacetaldehyde dehydrogenase |
52 | APE02948 | APE03027 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02948 | -1 | 17 | 3.969516 | putative D-methionine-binding lipoprotein MetQ | |
APE02949 | -1 | 18 | 5.947695 | Transaminase BacF | |
APE02950 | 0 | 19 | 6.518490 | 2-haloacrylate reductase | |
APE02951 | 2 | 20 | 6.017114 | hypothetical protein | |
APE02952 | 0 | 18 | 4.763983 | hypothetical protein | |
APE02953 | 1 | 16 | 4.669686 | hypothetical protein | |
APE02954 | 0 | 15 | 4.425264 | hypothetical protein | |
APE02955 | -1 | 16 | 4.785266 | Nodulation protein D 2 | |
APE02956 | 0 | 18 | 4.944005 | HTH-type transcriptional regulator PgrR | |
APE02957 | 1 | 18 | 4.831055 | hypothetical protein | |
APE02958 | 0 | 19 | 5.279931 | HTH-type transcriptional activator RhaS | |
APE02959 | -1 | 19 | 3.479491 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02960 | -1 | 20 | 3.399340 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02961 | -1 | 19 | 3.045956 | hypothetical protein | |
APE02962 | -2 | 15 | 1.899942 | Cyclic-di-GMP-binding biofilm dispersal mediator | |
APE02963 | 0 | 14 | 0.685626 | hypothetical protein | |
APE02964 | 0 | 14 | 0.631797 | hypothetical protein | |
APE02965 | 1 | 12 | 0.715828 | hypothetical protein | |
APE02966 | 1 | 12 | 0.516051 | hypothetical protein | |
APE02967 | 1 | 13 | 0.706819 | hypothetical protein | |
APE02968 | 3 | 18 | 1.297249 | hypothetical protein | |
APE02969 | 4 | 20 | 1.845009 | hypothetical protein | |
APE02970 | 3 | 17 | 1.937741 | hypothetical protein | |
APE02971 | 3 | 19 | 2.062385 | hypothetical protein | |
APE02972 | 3 | 19 | 1.173078 | hypothetical protein | |
APE02973 | 3 | 19 | 0.697133 | hypothetical protein | |
APE02974 | 3 | 19 | -0.544250 | hypothetical protein | |
APE02975 | 4 | 20 | -0.727702 | hypothetical protein | |
APE02976 | 6 | 23 | -1.757059 | hypothetical protein | |
APE02977 | 5 | 23 | -2.657960 | hypothetical protein | |
APE02978 | 3 | 21 | -0.141498 | hypothetical protein | |
APE02979 | 3 | 20 | -0.028415 | hypothetical protein | |
APE02980 | 3 | 20 | 0.625968 | hypothetical protein | |
APE02981 | 2 | 14 | 2.385474 | hypothetical protein | |
APE02982 | 3 | 13 | 1.991058 | hypothetical protein | |
APE02983 | 3 | 13 | 3.693120 | hypothetical protein | |
APE02984 | 4 | 13 | 3.994360 | hypothetical protein | |
APE02985 | 4 | 11 | 3.895744 | Chaperone protein ClpB | |
APE02986 | 2 | 10 | 3.294846 | Protein ClpV1 | |
APE02987 | 0 | 8 | 1.589233 | Major exported protein | |
APE02988 | -1 | 8 | 2.227870 | Outer membrane protein A | |
APE02989 | -3 | 8 | -0.492359 | hypothetical protein | |
APE02990 | -1 | 13 | -4.398835 | hypothetical protein | |
APE02991 | 1 | 15 | -5.601154 | hypothetical protein | |
APE02992 | 1 | 24 | -5.841797 | hypothetical protein | |
APE02993 | 0 | 23 | -4.958822 | Putative cysteine protease YraA | |
APE02994 | 0 | 28 | -6.072536 | hypothetical protein | |
APE02995 | 0 | 25 | -4.798911 | hypothetical protein | |
APE02996 | -1 | 22 | 0.006000 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02997 | 0 | 22 | -0.861815 | HTH-type transcriptional regulator PgrR | |
APE02998 | 1 | 23 | -2.645141 | hypothetical protein | |
APE02999 | 1 | 24 | -2.720081 | putative oxidoreductase YtbE | |
APE03000 | 3 | 32 | -6.054920 | hypothetical protein | |
APE03001 | 2 | 31 | -6.099573 | Purine ribonucleoside efflux pump NepI | |
APE03002 | 4 | 20 | -5.876583 | hypothetical protein | |
APE03003 | 3 | 17 | -4.292678 | hypothetical protein | |
APE03004 | 1 | 14 | -2.406147 | HTH-type transcriptional regulator PgrR | |
APE03005 | 0 | 13 | -1.965642 | hypothetical protein | |
APE03006 | -1 | 11 | 2.635123 | hypothetical protein | |
APE03007 | 0 | 12 | 3.113013 | Periplasmic murein peptide-binding protein | |
APE03008 | 2 | 13 | 3.414328 | Murein peptide amidase A | |
APE03009 | 2 | 11 | 2.762799 | L-Ala-D/L-Glu epimerase | |
APE03010 | 1 | 12 | 2.726125 | Thiol peroxidase | |
APE03011 | 1 | 14 | 2.789216 | hypothetical protein | |
APE03012 | 1 | 14 | 2.598516 | Transcriptional regulatory protein TyrR | |
APE03013 | 1 | 16 | 2.268616 | putative 6-phospho-beta-glucosidase | |
APE03014 | 2 | 19 | 2.814867 | HTH-type transcriptional regulator DsdC | |
APE03015 | 4 | 18 | 2.545477 | hypothetical protein | |
APE03016 | 4 | 16 | 1.738945 | putative protein YcjX | |
APE03017 | 6 | 16 | 1.170406 | Phage shock protein D | |
APE03018 | 3 | 16 | 2.034184 | Phage shock protein C | |
APE03019 | 2 | 17 | 2.934745 | Phage shock protein B | |
APE03020 | 1 | 16 | 3.719305 | hypothetical protein | |
APE03021 | 4 | 18 | 4.541018 | Anaerobic nitric oxide reductase transcription | |
APE03022 | 3 | 18 | 4.808106 | Psp operon transcriptional activator | |
APE03023 | 3 | 17 | 5.245623 | Quinolone resistance protein NorB | |
APE03024 | 0 | 15 | 4.837737 | Hippurate hydrolase | |
APE03025 | 0 | 15 | 4.471839 | HTH-type transcriptional activator RhaR | |
APE03026 | 1 | 15 | 4.340787 | hypothetical protein | |
APE03027 | -1 | 15 | 3.588998 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02951 | HTHTETR | 59 | 3e-13 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02953 | NUCEPIMERASE | 40 | 6e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02955 | PF05043 | 34 | 9e-04 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02959 | DHBDHDRGNASE | 55 | 3e-12 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02960 | DHBDHDRGNASE | 38 | 1e-06 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02962 | DHBDHDRGNASE | 83 | 3e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02980 | PF06291 | 27 | 0.019 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02986 | HTHFIS | 31 | 0.013 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02988 | OMPADOMAIN | 91 | 4e-22 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02996 | DHBDHDRGNASE | 74 | 8e-18 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02997 | SURFACELAYER | 31 | 0.006 | Lactobacillus surface layer protein signature. | |
>SURFACELAYER#Lactobacillus surface layer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03001 | TCRTETB | 33 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03012 | HTHFIS | 305 | e-101 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03021 | HTHFIS | 250 | 3e-83 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03022 | HTHFIS | 48 | 5e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03023 | TCRTETB | 89 | 3e-21 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
53 | APE03062 | APE03086 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03062 | -1 | 16 | 3.086903 | 5'-3' exoribonuclease | |
APE03063 | -1 | 17 | 3.497295 | 5'-3' exoribonuclease | |
APE03065 | -1 | 17 | 3.029196 | Anthranilate synthase component 1 | |
APE03066 | -2 | 11 | 2.952888 | Bifunctional protein TrpGD | |
APE03067 | -1 | 10 | 1.534959 | Tryptophan biosynthesis protein TrpCF | |
APE03068 | 0 | 11 | 0.490281 | Tryptophan synthase beta chain | |
APE03069 | 1 | 18 | -1.488889 | Tryptophan synthase alpha chain | |
APE03070 | 1 | 24 | -2.970295 | Putative hydroxypyruvate reductase | |
APE03071 | 1 | 23 | -2.607556 | Putative hydroxypyruvate reductase | |
APE03072 | 1 | 23 | -3.745103 | putative tartrate dehydrogenase/decarboxylase | |
APE03073 | 1 | 20 | -1.635306 | Putative tartrate transporter | |
APE03074 | 1 | 25 | -1.353444 | Hydrogen peroxide-inducible genes activator | |
APE03075 | 0 | 18 | 2.350736 | hypothetical protein | |
APE03076 | 1 | 17 | 2.916186 | hypothetical protein | |
APE03077 | 1 | 14 | 2.191584 | hypothetical protein | |
APE03078 | 1 | 14 | 2.390981 | hypothetical protein | |
APE03080 | 2 | 14 | 1.153593 | hypothetical protein | |
APE03081 | 1 | 12 | 1.265386 | hypothetical protein | |
APE03082 | 1 | 11 | 0.574705 | Catecholate siderophore receptor Fiu | |
APE03083 | 1 | 11 | -0.322964 | Catecholate siderophore receptor Fiu | |
APE03084 | 1 | 9 | -1.941590 | PKHD-type hydroxylase | |
APE03085 | 2 | 10 | -2.597770 | Outer membrane protein W | |
APE03086 | 0 | 11 | -3.209158 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03073 | TCRTETB | 32 | 0.006 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03081 | DHBDHDRGNASE | 47 | 2e-08 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
54 | APE03100 | APE03125 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03100 | -2 | 11 | -4.057800 | Chitooligosaccharide deacetylase ChbG | |
APE03101 | -1 | 12 | -5.138173 | 6-phospho-beta-glucosidase | |
APE03102 | 0 | 14 | -5.217880 | HTH-type transcriptional regulator ChbR | |
APE03103 | -1 | 13 | -1.768608 | PTS system N,N'-diacetylchitobiose-specific EIIA | |
APE03104 | -2 | 14 | -2.205617 | PTS system N,N'-diacetylchitobiose-specific EIIC | |
APE03105 | -1 | 13 | 0.461929 | PTS system N,N'-diacetylchitobiose-specific EIIB | |
APE03106 | -1 | 14 | 2.813136 | Osmotically-inducible putative lipoprotein OsmE | |
APE03107 | 0 | 16 | 3.255525 | NH(3)-dependent NAD(+) synthetase | |
APE03108 | -1 | 19 | 5.489450 | Excinuclease cho | |
APE03109 | 0 | 17 | 5.085817 | Periplasmic chaperone Spy | |
APE03110 | -1 | 17 | 5.627891 | Succinylglutamate desuccinylase | |
APE03111 | -1 | 15 | 4.500925 | N-succinylarginine dihydrolase | |
APE03112 | -1 | 16 | 3.876826 | N-succinylarginine dihydrolase | |
APE03113 | -1 | 17 | 4.284607 | N-succinylglutamate 5-semialdehyde | |
APE03114 | 0 | 19 | 3.431242 | Arginine N-succinyltransferase | |
APE03115 | -1 | 18 | 4.541617 | Succinylornithine transaminase | |
APE03116 | 3 | 15 | 6.829095 | Exodeoxyribonuclease III | |
APE03117 | 3 | 15 | 8.262246 | hypothetical protein | |
APE03118 | 4 | 16 | 8.326443 | TVP38/TMEM64 family inner membrane protein YdjZ | |
APE03119 | 4 | 16 | 8.165792 | hypothetical protein | |
APE03120 | 4 | 16 | 8.250518 | Protein YnjB | |
APE03121 | 2 | 15 | 6.900728 | Inner membrane ABC transporter permease protein | |
APE03122 | 0 | 15 | 5.001406 | Fe(3+) ions import ATP-binding protein FbpC 2 | |
APE03123 | -1 | 15 | 3.997546 | Thiosulfate sulfurtransferase YnjE | |
APE03124 | -1 | 13 | 3.076769 | Inner membrane protein YnjF | |
APE03125 | -1 | 15 | 3.060581 | CTP pyrophosphohydrolase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03122 | PF05272 | 28 | 0.041 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
55 | APE03136 | APE03241 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03136 | 3 | 24 | -3.390952 | Chitinase A1 | |
APE03137 | 4 | 28 | -3.965738 | hypothetical protein | |
APE03138 | 1 | 23 | -1.964658 | hypothetical protein | |
APE03139 | 1 | 22 | -2.046142 | Peptide methionine sulfoxide reductase MsrB | |
APE03140 | 1 | 20 | -3.047984 | Glyceraldehyde-3-phosphate dehydrogenase A | |
APE03141 | 0 | 15 | -2.559331 | Glyceraldehyde-3-phosphate dehydrogenase A | |
APE03142 | -1 | 11 | -3.301324 | Putative glucose-6-phosphate 1-epimerase | |
APE03143 | 0 | 11 | -3.381707 | hypothetical protein | |
APE03144 | 0 | 12 | -2.804200 | MltA-interacting protein | |
APE03145 | -1 | 11 | -0.812480 | hypothetical protein | |
APE03146 | -1 | 10 | 1.872195 | hypothetical protein | |
APE03147 | -1 | 14 | 3.372760 | hypothetical protein | |
APE03148 | -1 | 16 | 4.993269 | hypothetical protein | |
APE03149 | 0 | 18 | 4.829318 | HTH-type transcriptional regulator DmlR | |
APE03150 | 1 | 18 | 3.989249 | Sugar efflux transporter B | |
APE03151 | 0 | 21 | 1.635632 | Diacetyl reductase [(S)-acetoin forming] | |
APE03152 | -1 | 21 | 0.094430 | HTH-type transcriptional regulator PgrR | |
APE03153 | -1 | 19 | -0.120666 | Protein UmuC | |
APE03154 | -1 | 18 | -1.033745 | Protein UmuD | |
APE03155 | -1 | 19 | 0.307152 | hypothetical protein | |
APE03156 | 1 | 18 | 3.120782 | hypothetical protein | |
APE03157 | 1 | 17 | 4.970437 | hypothetical protein | |
APE03158 | 2 | 17 | 5.972733 | hypothetical protein | |
APE03159 | 3 | 18 | 6.036615 | hypothetical protein | |
APE03160 | 4 | 17 | 6.373567 | HTH-type transcriptional regulator NimR | |
APE03161 | 1 | 16 | 4.992284 | 2-nitroimidazole transporter | |
APE03162 | -1 | 20 | 2.954017 | CTP synthase | |
APE03163 | 0 | 19 | 1.931909 | hypothetical protein | |
APE03164 | 1 | 18 | -0.089415 | hypothetical protein | |
APE03165 | 1 | 17 | -0.956240 | hypothetical protein | |
APE03166 | 2 | 15 | -1.187572 | Diguanylate cyclase DgcP | |
APE03167 | 1 | 16 | -1.864189 | putative membrane protein YoaK | |
APE03168 | -1 | 14 | -0.163288 | hypothetical protein | |
APE03169 | -1 | 13 | 0.306511 | Leucine efflux protein | |
APE03170 | 0 | 12 | 0.926794 | Lipid A biosynthesis palmitoleoyltransferase | |
APE03171 | 0 | 13 | 0.151274 | L-asparaginase | |
APE03172 | 0 | 14 | 0.498489 | 3'3'-cGAMP-specific phosphodiesterase 1 | |
APE03173 | -1 | 13 | 0.737370 | hypothetical protein | |
APE03174 | 2 | 17 | -1.082034 | HTH-type transcriptional regulator GltC | |
APE03175 | 1 | 16 | -1.481746 | Gallate decarboxylase | |
APE03176 | 0 | 18 | -2.159436 | Cyclic di-GMP phosphodiesterase PdeH | |
APE03177 | -1 | 15 | -0.126167 | hypothetical protein | |
APE03178 | -1 | 12 | -0.816168 | hypothetical protein | |
APE03179 | 0 | 10 | -1.122065 | hypothetical protein | |
APE03180 | -1 | 11 | -2.244445 | Cytochrome bd-I ubiquinol oxidase subunit 2 | |
APE03181 | -1 | 17 | -3.514683 | Putative cytochrome bd menaquinol oxidase | |
APE03182 | 0 | 20 | -3.900239 | hypothetical protein | |
APE03183 | 0 | 22 | -3.674226 | hypothetical protein | |
APE03184 | 1 | 26 | -4.617915 | Protein YciE | |
APE03185 | 1 | 27 | -3.835960 | Protein YciF | |
APE03186 | -2 | 24 | -0.937505 | hypothetical protein | |
APE03187 | -3 | 24 | -0.931627 | putative zinc-binding alcohol dehydrogenase | |
APE03188 | 1 | 27 | -1.989721 | hypothetical protein | |
APE03189 | 2 | 24 | -2.814990 | hypothetical protein | |
APE03190 | 4 | 21 | -1.890013 | hypothetical protein | |
APE03191 | 3 | 18 | -1.200650 | hypothetical protein | |
APE03192 | 3 | 19 | -1.748395 | Isocitrate dehydrogenase [NADP] | |
APE03193 | 3 | 19 | -1.919378 | hypothetical protein | |
APE03194 | 3 | 19 | -1.827805 | hypothetical protein | |
APE03195 | 2 | 18 | -1.759123 | hypothetical protein | |
APE03196 | 2 | 19 | -2.073195 | Chromosome partition protein Smc | |
APE03197 | 0 | 25 | -4.843341 | hypothetical protein | |
APE03198 | 0 | 22 | -2.798726 | hypothetical protein | |
APE03199 | 0 | 21 | -2.383918 | hypothetical protein | |
APE03200 | 1 | 23 | -2.362566 | hypothetical protein | |
APE03201 | 2 | 23 | -2.160116 | hypothetical protein | |
APE03202 | 1 | 23 | -2.201823 | hypothetical protein | |
APE03203 | 0 | 25 | -2.471998 | hypothetical protein | |
APE03204 | 1 | 25 | -3.976262 | hypothetical protein | |
APE03205 | 1 | 26 | -3.705388 | hypothetical protein | |
APE03206 | 2 | 24 | -3.625446 | hypothetical protein | |
APE03207 | 3 | 24 | -3.748726 | hypothetical protein | |
APE03208 | 2 | 23 | -3.252987 | hypothetical protein | |
APE03209 | 1 | 20 | -3.055534 | hypothetical protein | |
APE03210 | 2 | 23 | -4.818707 | hypothetical protein | |
APE03211 | 2 | 24 | -4.958444 | hypothetical protein | |
APE03212 | 3 | 28 | -5.739993 | hypothetical protein | |
APE03213 | 2 | 29 | -5.977592 | hypothetical protein | |
APE03214 | 3 | 31 | -6.493603 | hypothetical protein | |
APE03215 | 5 | 43 | -9.191788 | hypothetical protein | |
APE03216 | 4 | 44 | -8.165724 | hypothetical protein | |
APE03217 | 4 | 39 | -7.774075 | hypothetical protein | |
APE03218 | 5 | 40 | -8.155869 | hypothetical protein | |
APE03219 | 4 | 54 | -13.449475 | hypothetical protein | |
APE03220 | 4 | 58 | -14.897085 | hypothetical protein | |
APE03221 | 4 | 53 | -11.823520 | hypothetical protein | |
APE03222 | 4 | 55 | -12.329859 | Lysozyme RrrD | |
APE03223 | 3 | 59 | -13.425830 | hypothetical protein | |
APE03225 | 2 | 58 | -13.450061 | hypothetical protein | |
APE03226 | 3 | 56 | -12.382059 | hypothetical protein | |
APE03227 | 3 | 60 | -13.492035 | hypothetical protein | |
APE03228 | 5 | 66 | -15.775376 | LexA repressor | |
APE03229 | 4 | 56 | -13.792116 | hypothetical protein | |
APE03230 | 6 | 54 | -12.769156 | DNA damage-inducible protein I | |
APE03231 | 4 | 53 | -12.208951 | hypothetical protein | |
APE03232 | 4 | 51 | -11.298083 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE03233 | 6 | 46 | -9.840022 | hypothetical protein | |
APE03234 | 5 | 44 | -9.454648 | hypothetical protein | |
APE03235 | 3 | 43 | -9.322669 | Primosomal protein 1 | |
APE03236 | 1 | 47 | -11.098864 | hypothetical protein | |
APE03237 | 1 | 38 | -9.668752 | hypothetical protein | |
APE03238 | 0 | 33 | -8.148302 | hypothetical protein | |
APE03239 | -1 | 31 | -7.698726 | HTH-type transcriptional regulator IscR | |
APE03240 | -1 | 26 | -6.745562 | hypothetical protein | |
APE03241 | -1 | 19 | -4.254464 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03150 | TCRTETB | 46 | 2e-07 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03151 | DHBDHDRGNASE | 122 | 5e-36 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03159 | PRTACTNFAMLY | 27 | 0.045 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03173 | LCRVANTIGEN | 32 | 0.007 | Low calcium response V antigen signature. | |
>LCRVANTIGEN#Low calcium response V antigen signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03180 | PF06580 | 29 | 0.019 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03196 | PF01540 | 40 | 2e-04 | Adhesin lipoprotein | |
>PF01540#Adhesin lipoprotein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03212 | SECA | 27 | 0.033 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03232 | DHBDHDRGNASE | 113 | 1e-32 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
56 | APE03299 | APE03311 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03299 | 2 | 20 | -1.284635 | 3-oxoacyl-[acyl-carrier-protein] synthase 2 | |
APE03300 | 3 | 22 | -1.592272 | Acyl carrier protein | |
APE03301 | 3 | 22 | -1.921827 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE03302 | 3 | 20 | -1.559128 | Malonyl CoA-acyl carrier protein transacylase | |
APE03303 | 2 | 19 | -2.240894 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 | |
APE03304 | 4 | 17 | 0.019020 | Phosphate acyltransferase | |
APE03305 | 3 | 15 | 0.699994 | 50S ribosomal protein L32 | |
APE03306 | 1 | 12 | 1.701808 | Large ribosomal RNA subunit accumulation protein | |
APE03307 | -1 | 11 | 2.031020 | 7-methyl-GTP pyrophosphatase | |
APE03308 | -1 | 11 | 2.497630 | Ribosomal large subunit pseudouridine synthase | |
APE03310 | -1 | 11 | 2.728894 | Ribonuclease E | |
APE03311 | 2 | 16 | 1.858958 | HTH-type transcriptional regulator DmlR |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03300 | TYPE4SSCAGA | 28 | 0.005 | Type IV secretion system CagA exotoxin signature. | |
>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03301 | DHBDHDRGNASE | 156 | 4e-49 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03310 | IGASERPTASE | 50 | 5e-08 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
57 | APE03338 | APE03343 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03338 | 2 | 12 | 2.014492 | Inner membrane protein YcdZ | |
APE03339 | 4 | 17 | 2.826274 | Chaperone protein YcdY | |
APE03340 | 3 | 23 | 2.779231 | putative phosphatase YcdX | |
APE03341 | 1 | 19 | 3.579611 | putative phosphatase YcdX | |
APE03342 | -1 | 17 | 3.329269 | Glyoxylate/hydroxypyruvate reductase A | |
APE03343 | -1 | 17 | 3.377941 | Glyoxylate/hydroxypyruvate reductase A |
58 | APE03360 | APE03369 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03360 | -2 | 19 | 3.490671 | Bifunctional protein PutA | |
APE03361 | -1 | 14 | 2.633278 | Bifunctional protein PutA | |
APE03362 | -1 | 16 | 2.984044 | hypothetical protein | |
APE03363 | -1 | 15 | 3.090577 | HTH-type transcriptional regulator RutR | |
APE03364 | 0 | 16 | 3.822685 | Pyrimidine monooxygenase RutA | |
APE03365 | -2 | 16 | 4.913023 | Peroxyureidoacrylate/ureidoacrylate | |
APE03366 | 1 | 18 | 5.632125 | Putative aminoacrylate peracid reductase RutC | |
APE03367 | 0 | 17 | 5.775641 | Putative aminoacrylate hydrolase RutD | |
APE03368 | 2 | 15 | 4.331191 | putative malonic semialdehyde reductase RutE | |
APE03369 | 1 | 15 | 3.737427 | FMN reductase (NADH) RutF |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03363 | HTHTETR | 42 | 4e-07 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03365 | ISCHRISMTASE | 72 | 3e-17 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. |
59 | APE03433 | APE03447 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03433 | 0 | 19 | -4.378354 | Nicotinate phosphoribosyltransferase | |
APE03434 | -1 | 18 | -4.371817 | Hippurate hydrolase | |
APE03435 | 1 | 17 | -4.285753 | N-carbamoyl-L-amino acid hydrolase | |
APE03436 | 0 | 18 | -3.859692 | Serine transporter | |
APE03437 | 1 | 19 | -3.093790 | Diaminopropionate ammonia-lyase | |
APE03438 | 2 | 22 | -2.625657 | Leucine-responsive regulatory protein | |
APE03439 | 2 | 24 | -2.197606 | Asparagine--tRNA ligase | |
APE03440 | 0 | 16 | -2.122186 | Outer membrane protein YedS | |
APE03441 | 0 | 15 | -0.467166 | Aspartate aminotransferase | |
APE03442 | 2 | 16 | 0.891162 | Hydroxyacylglutathione hydrolase GloC | |
APE03443 | 2 | 15 | 0.962873 | Hydroxyacylglutathione hydrolase GloC | |
APE03444 | 2 | 15 | 0.681041 | hypothetical protein | |
APE03445 | 3 | 15 | 0.569908 | putative L,D-transpeptidase YcbB | |
APE03446 | 3 | 15 | 0.437198 | Chromosome partition protein MukB | |
APE03447 | 2 | 13 | 0.570322 | Chromosome partition protein MukB |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03440 | ECOLIPORIN | 496 | e-179 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03446 | GPOSANCHOR | 37 | 2e-04 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03447 | GPOSANCHOR | 46 | 6e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
60 | APE03460 | APE03467 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03460 | 4 | 26 | -2.570261 | Integration host factor subunit beta | |
APE03461 | 4 | 24 | -1.769115 | 30S ribosomal protein S1 | |
APE03462 | 0 | 12 | -1.099510 | Cytidylate kinase | |
APE03463 | 2 | 25 | -2.495141 | 3-phosphoshikimate 1-carboxyvinyltransferase | |
APE03464 | 2 | 27 | -3.612892 | Phosphoserine aminotransferase | |
APE03465 | 1 | 24 | -3.301363 | hypothetical protein | |
APE03466 | 0 | 24 | -2.622394 | Ribosomal protein S12 methylthiotransferase | |
APE03467 | 2 | 24 | -2.868778 | putative formate transporter 1 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03460 | DNABINDINGHU | 116 | 5e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. |
61 | APE03587 | APE03592 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03587 | 4 | 11 | -0.368561 | ATP-dependent RNA helicase RhlE | |
APE03588 | 3 | 12 | -1.556055 | ATP-dependent RNA helicase RhlE | |
APE03589 | 5 | 13 | -2.187094 | Apulose-4-phosphate transketolase subunit B | |
APE03590 | 4 | 14 | -3.014243 | Apulose-4-phosphate transketolase subunit A | |
APE03591 | 4 | 17 | -3.211667 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE03592 | 2 | 18 | -2.771670 | putative glucarate transporter |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03591 | DHBDHDRGNASE | 118 | 2e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03592 | TCRTETA | 43 | 1e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
62 | APE03616 | APE03626 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03616 | 1 | 13 | 4.343422 | Sensor protein BasS | |
APE03617 | 0 | 12 | 3.966075 | hypothetical protein | |
APE03618 | -1 | 12 | 4.152256 | UvrABC system protein B | |
APE03619 | 0 | 11 | 4.903556 | High-affinity branched-chain amino acid | |
APE03620 | -1 | 11 | 4.128705 | ATP-dependent dethiobiotin synthetase BioD | |
APE03621 | -2 | 12 | 3.863524 | 8-amino-7-oxononanoate synthase | |
APE03622 | -2 | 15 | 2.961379 | Biotin synthase | |
APE03623 | -1 | 14 | 3.280041 | Adenosylmethionine-8-amino-7-oxononanoate | |
APE03624 | -1 | 14 | 3.756423 | hypothetical protein | |
APE03625 | -1 | 13 | 3.852361 | Proline-specific permease ProY | |
APE03626 | -1 | 13 | 3.909758 | Histidine ammonia-lyase |
63 | APE03635 | APE03650 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03635 | -1 | 17 | -3.565610 | Multidrug resistance protein MdtA | |
APE03636 | -1 | 15 | -4.653414 | Efflux pump membrane transporter BepE | |
APE03637 | 0 | 22 | -8.317511 | hypothetical protein | |
APE03638 | 2 | 25 | -8.607642 | hypothetical protein | |
APE03639 | 2 | 28 | -8.379313 | hypothetical protein | |
APE03640 | 2 | 27 | -7.618254 | hypothetical protein | |
APE03641 | 2 | 25 | -6.436511 | HTH-type transcriptional repressor BluR | |
APE03642 | 1 | 20 | -5.171586 | Blue light- and temperature-regulated | |
APE03643 | 0 | 20 | -4.426504 | hypothetical protein | |
APE03644 | 0 | 16 | -2.522052 | putative two-component-system connector protein | |
APE03645 | 0 | 13 | 0.007987 | hypothetical protein | |
APE03646 | 1 | 13 | 1.446066 | putative two-component-system connector protein | |
APE03647 | 0 | 13 | 2.073887 | 6-phosphogluconolactonase | |
APE03648 | 0 | 14 | 2.133793 | Pyridoxal phosphate phosphatase YbhA | |
APE03649 | 0 | 15 | 2.778030 | Pyridoxal phosphate phosphatase YbhA | |
APE03650 | 2 | 13 | 2.916826 | Vitamin B12 import ATP-binding protein BtuD |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03635 | RTXTOXIND | 37 | 1e-04 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03636 | ACRIFLAVINRP | 393 | e-124 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
64 | APE03664 | APE03724 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03664 | 4 | 20 | -1.011987 | Nicotinamide riboside transporter PnuC | |
APE03665 | 3 | 20 | -1.014436 | Quinolinate synthase A | |
APE03677 | 4 | 24 | -2.006925 | *******Cell division coordinator CpoB | |
APE03678 | 4 | 27 | -2.113053 | Peptidoglycan-associated lipoprotein | |
APE03679 | 4 | 24 | -1.785672 | Tol-Pal system protein TolB | |
APE03680 | 10 | 26 | -2.364607 | hypothetical protein | |
APE03681 | 1 | 20 | -3.276368 | Tol-Pal system protein TolR | |
APE03682 | 0 | 20 | -3.081941 | Tol-Pal system protein TolQ | |
APE03683 | 0 | 23 | -2.423043 | Acyl-CoA thioester hydrolase YbgC | |
APE03684 | 0 | 28 | -1.753421 | hypothetical protein | |
APE03685 | 0 | 30 | -1.134112 | Cytochrome bd-I ubiquinol oxidase subunit X | |
APE03686 | 1 | 29 | -1.059886 | Cytochrome bd-I ubiquinol oxidase subunit 2 | |
APE03687 | 1 | 27 | -1.415321 | Cytochrome bd-I ubiquinol oxidase subunit 1 | |
APE03688 | 2 | 28 | -0.703705 | Succinate--CoA ligase [ADP-forming] subunit | |
APE03689 | 2 | 27 | -0.908323 | Succinate--CoA ligase [ADP-forming] subunit | |
APE03690 | 2 | 23 | -1.306702 | Dihydrolipoyllysine-residue succinyltransferase | |
APE03691 | 2 | 22 | -2.206046 | 2-oxoglutarate dehydrogenase E1 component | |
APE03692 | 2 | 19 | -2.583452 | Succinate dehydrogenase iron-sulfur subunit | |
APE03693 | 2 | 18 | -2.170268 | Succinate dehydrogenase flavoprotein subunit | |
APE03694 | 0 | 17 | -3.030829 | Succinate dehydrogenase hydrophobic membrane | |
APE03695 | 0 | 15 | -1.932389 | Succinate dehydrogenase cytochrome b556 subunit | |
APE03696 | 0 | 13 | -0.344273 | Citrate synthase | |
APE03697 | 2 | 17 | 1.187006 | Endonuclease 8 | |
APE03698 | 2 | 16 | 1.831938 | Pyrrolidone-carboxylate peptidase | |
APE03699 | 1 | 15 | 2.055441 | hypothetical protein | |
APE03700 | 0 | 13 | 2.507208 | hypothetical protein | |
APE03701 | -1 | 12 | 2.851274 | 5-oxoprolinase subunit A | |
APE03702 | -1 | 12 | 2.364417 | 5-oxoprolinase subunit C | |
APE03703 | -1 | 11 | 2.915847 | 5-oxoprolinase subunit B | |
APE03704 | -1 | 16 | 3.369037 | GTP cyclohydrolase 1 type 2 | |
APE03705 | -1 | 16 | 3.591566 | Dipeptide permease D | |
APE03706 | -1 | 15 | 4.265542 | Deoxyribodipyrimidine photo-lyase | |
APE03707 | 0 | 19 | 4.854783 | hypothetical protein | |
APE03708 | 0 | 19 | 4.759235 | Potassium-transporting ATPase potassium-binding | |
APE03709 | 1 | 20 | 4.868978 | Potassium-transporting ATPase ATP-binding | |
APE03710 | 2 | 18 | 4.268549 | Potassium-transporting ATPase KdpC subunit | |
APE03711 | -1 | 14 | 3.322218 | Sensor protein KdpD | |
APE03712 | -2 | 12 | 1.751713 | Sensor protein KdpD | |
APE03713 | -2 | 12 | 0.241854 | KDP operon transcriptional regulatory protein | |
APE03714 | -2 | 14 | -0.437830 | hypothetical protein | |
APE03715 | 0 | 14 | -0.874179 | hypothetical protein | |
APE03716 | 2 | 15 | -1.273988 | Phosphoglucomutase | |
APE03717 | 1 | 13 | -1.793824 | Negative modulator of initiation of replication | |
APE03718 | 1 | 15 | -1.079183 | Esterase YbfF | |
APE03719 | -1 | 16 | -3.511766 | putative protein YbfE | |
APE03720 | -1 | 17 | -5.020948 | Flavodoxin | |
APE03721 | 0 | 16 | -4.372771 | Ferric uptake regulation protein | |
APE03722 | 0 | 16 | -3.355657 | hypothetical protein | |
APE03723 | 0 | 19 | -2.977737 | putative lipoprotein ChiQ | |
APE03724 | 1 | 21 | -3.276685 | Chitoporin |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03677 | FLGMRINGFLIF | 28 | 0.048 | Flagellar M-ring protein signature. | |
>FLGMRINGFLIF#Flagellar M-ring protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03678 | OMPADOMAIN | 116 | 7e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03680 | IGASERPTASE | 64 | 2e-13 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03692 | TCRTETOQM | 31 | 0.003 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03705 | BACINVASINB | 29 | 0.036 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03712 | PF06580 | 30 | 0.024 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03713 | HTHFIS | 88 | 2e-22 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
65 | APE03782 | APE03836 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03782 | -2 | 13 | -4.417305 | Regulator of nucleoside diphosphate kinase | |
APE03783 | -2 | 12 | -4.741201 | Universal stress protein UP12 | |
APE03784 | -2 | 11 | -4.259252 | Alkyl hydroperoxide reductase subunit F | |
APE03785 | -1 | 13 | -3.505761 | Alkyl hydroperoxide reductase C | |
APE03787 | -1 | 14 | -2.896725 | Thiol:disulfide interchange protein DsbG | |
APE03788 | -1 | 14 | -2.259313 | putative HTH-type transcriptional regulator | |
APE03789 | -2 | 11 | 1.776642 | Phosphoadenosine phosphosulfate reductase | |
APE03790 | -3 | 11 | 2.749027 | putative protein YbdM | |
APE03791 | -2 | 12 | 1.969405 | Methionine aminotransferase | |
APE03792 | -1 | 13 | 1.778385 | Enolase-phosphatase E1 | |
APE03793 | 0 | 14 | 3.183351 | Acireductone dioxygenase | |
APE03794 | 1 | 12 | 4.307620 | Dimethyl sulfoxide/trimethylamine N-oxide | |
APE03795 | 1 | 14 | 4.349064 | hypothetical protein | |
APE03796 | 1 | 16 | 5.142891 | hypothetical protein | |
APE03797 | 2 | 18 | 6.595794 | Vitamin B12 import ATP-binding protein BtuD | |
APE03798 | 2 | 18 | 7.161320 | Xylose import ATP-binding protein XylG | |
APE03799 | 2 | 19 | 6.801392 | D-allose transport system permease protein AlsC | |
APE03800 | 2 | 19 | 6.083072 | Ribose import permease protein RbsC | |
APE03801 | 2 | 19 | 5.706294 | putative sugar kinase YdjH | |
APE03802 | 3 | 19 | 5.149373 | Putative 2-hydroxyacid dehydrogenase YoaD | |
APE03803 | 2 | 20 | 5.016165 | L-xylulose/3-keto-L-gulonate kinase | |
APE03804 | 2 | 21 | 4.402617 | Methylthioribulose-1-phosphate dehydratase | |
APE03805 | 1 | 20 | 4.062961 | Cytosine permease | |
APE03806 | 1 | 18 | 4.267351 | hypothetical protein | |
APE03807 | -1 | 16 | 4.712946 | Cytosine deaminase | |
APE03808 | -2 | 16 | 4.800409 | Ribose operon repressor | |
APE03809 | -1 | 15 | 4.462636 | Inositol-1-monophosphatase | |
APE03810 | -2 | 15 | 3.793262 | Glycerol-3-phosphate transporter | |
APE03811 | -1 | 15 | 3.870145 | Glucose-1-phosphatase | |
APE03812 | -2 | 16 | 3.554286 | Methylthioribose-1-phosphate isomerase | |
APE03813 | -1 | 16 | 2.879459 | Methylthioribose kinase | |
APE03814 | 0 | 19 | 3.244961 | hypothetical protein | |
APE03815 | 0 | 17 | 3.546552 | hypothetical protein | |
APE03816 | 0 | 16 | 2.961237 | Ribose import permease protein RbsC | |
APE03817 | -1 | 15 | 2.223956 | Galactose/methyl galactoside import ATP-binding | |
APE03818 | 2 | 18 | 0.848257 | hypothetical protein | |
APE03819 | 2 | 17 | 0.922476 | Hydroxycarboxylate dehydrogenase A | |
APE03820 | 2 | 16 | 0.070264 | Cyclic-di-GMP-binding biofilm dispersal mediator | |
APE03821 | 0 | 18 | -0.103839 | hypothetical protein | |
APE03822 | -1 | 18 | 2.235725 | hypothetical protein | |
APE03823 | -1 | 20 | 2.772844 | hypothetical protein | |
APE03824 | -1 | 19 | 3.058937 | Peptide transporter CstA | |
APE03825 | -2 | 17 | 3.635179 | Peptide transporter CstA | |
APE03826 | 0 | 17 | 4.340105 | Proofreading thioesterase EntH | |
APE03827 | 0 | 17 | 4.782029 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
APE03828 | 0 | 17 | 5.339238 | Enterobactin synthase component B | |
APE03829 | 0 | 16 | 6.190782 | Enterobactin synthase component E | |
APE03830 | 1 | 16 | 6.954832 | Isochorismate synthase EntC | |
APE03831 | 3 | 19 | 7.977936 | Ferrienterobactin-binding periplasmic protein | |
APE03832 | 4 | 19 | 8.257311 | Enterobactin exporter EntS | |
APE03833 | 3 | 18 | 8.420410 | Ferric enterobactin transport system permease | |
APE03834 | 1 | 19 | 6.448538 | Ferric enterobactin transport system permease | |
APE03835 | 0 | 19 | 6.134461 | Ferric enterobactin transport ATP-binding | |
APE03836 | -1 | 16 | 4.966176 | Enterobactin synthase component F |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03806 | HTHFIS | 37 | 1e-04 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03810 | TCRTETA | 37 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03820 | DHBDHDRGNASE | 135 | 4e-41 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03825 | ACRIFLAVINRP | 31 | 0.013 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03827 | DHBDHDRGNASE | 340 | e-121 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03828 | ISCHRISMTASE | 427 | e-154 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03831 | FERRIBNDNGPP | 53 | 6e-10 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03832 | TCRTETB | 37 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
66 | APE03854 | APE03884 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03854 | -1 | 19 | 3.221350 | Inhibitor of vertebrate lysozyme | |
APE03855 | -2 | 19 | 2.995070 | High-affinity choline transport protein | |
APE03856 | -2 | 17 | 3.672656 | HTH-type transcriptional regulator BetI | |
APE03857 | -2 | 16 | 4.266529 | NAD/NADP-dependent betaine aldehyde | |
APE03858 | -1 | 17 | 4.764680 | Oxygen-dependent choline dehydrogenase | |
APE03859 | 0 | 17 | 4.881359 | hypothetical protein | |
APE03860 | 0 | 17 | 4.779374 | putative D,D-dipeptide-binding periplasmic | |
APE03861 | 2 | 19 | 5.836770 | Dipeptide transport system permease protein | |
APE03862 | 1 | 19 | 5.042096 | putative D,D-dipeptide transport system permease | |
APE03863 | -1 | 19 | 2.551905 | Dipeptide transport ATP-binding protein DppD | |
APE03864 | -1 | 18 | 1.488379 | putative D,D-dipeptide transport ATP-binding | |
APE03865 | 0 | 17 | -0.003950 | Taurine--pyruvate aminotransferase | |
APE03866 | -1 | 16 | 0.221319 | Sulfoacetaldehyde reductase | |
APE03867 | -1 | 15 | 0.940786 | Octopine permease ATP-binding protein P | |
APE03868 | 0 | 14 | 1.835628 | Histidine transport system permease protein | |
APE03869 | 0 | 14 | 3.700001 | L-cystine transport system permease protein | |
APE03870 | 0 | 15 | 4.582331 | L-cystine-binding protein FliY | |
APE03871 | 2 | 16 | 5.855953 | HTH-type transcriptional regulator TauR | |
APE03872 | 1 | 17 | 5.902486 | Histidinol-phosphate aminotransferase | |
APE03873 | 2 | 17 | 5.625642 | hypothetical protein | |
APE03874 | 0 | 19 | 5.013774 | N-carbamoyl-L-amino-acid hydrolase | |
APE03875 | 1 | 20 | 4.627317 | Oligopeptide transport ATP-binding protein OppD | |
APE03876 | 0 | 19 | 3.871805 | Oligopeptide transport ATP-binding protein OppF | |
APE03877 | 0 | 19 | 3.368649 | Glutathione transport system permease protein | |
APE03878 | 1 | 22 | 4.645628 | Glutathione transport system permease protein | |
APE03879 | 1 | 22 | 4.698790 | Periplasmic dipeptide transport protein | |
APE03880 | 2 | 21 | 5.636413 | Putative glutamate--cysteine ligase 2 | |
APE03881 | 1 | 22 | 5.201022 | Putative glutamate--cysteine ligase 2 | |
APE03882 | 1 | 22 | 5.056823 | hypothetical protein | |
APE03883 | 2 | 22 | 5.124828 | Efflux pump membrane transporter BepG | |
APE03884 | 1 | 18 | 3.324521 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03856 | HTHTETR | 64 | 5e-15 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03866 | DHBDHDRGNASE | 84 | 2e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03883 | ACRIFLAVINRP | 869 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03884 | ACRIFLAVINRP | 46 | 2e-10 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
67 | APE03893 | APE03913 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03893 | -2 | 15 | -3.238068 | hypothetical protein | |
APE03894 | -2 | 16 | -3.256260 | Oxygen-insensitive NAD(P)H nitroreductase | |
APE03895 | 0 | 19 | -3.778634 | hypothetical protein | |
APE03896 | 1 | 21 | -5.330160 | PTS system sorbose-specific EIIB component | |
APE03897 | 1 | 22 | -5.010477 | PTS system sorbose-specific EIIC component | |
APE03898 | 2 | 20 | -4.979440 | PTS system mannose-specific EIID component | |
APE03899 | 2 | 20 | -4.331418 | hypothetical protein | |
APE03900 | 1 | 15 | -2.954667 | Fructosamine deglycase FrlB | |
APE03901 | 0 | 13 | -0.332824 | hypothetical protein | |
APE03902 | 1 | 14 | 1.568365 | Transcriptional regulatory protein DagR | |
APE03903 | 2 | 15 | 2.976818 | hypothetical protein | |
APE03904 | 1 | 14 | 2.692459 | hypothetical protein | |
APE03905 | -1 | 12 | 1.701320 | hypothetical protein | |
APE03906 | -1 | 9 | -0.176811 | Drug efflux pump JefA | |
APE03907 | 1 | 13 | -4.914234 | Miniconductance mechanosensitive channel YbdG | |
APE03908 | 2 | 17 | -5.646292 | Ribose operon repressor | |
APE03909 | 3 | 23 | -7.630957 | hypothetical protein | |
APE03910 | 2 | 23 | -8.206669 | Common pilus major fimbrillin subunit EcpA | |
APE03911 | 2 | 23 | -7.967687 | putative fimbrial chaperone EcpB | |
APE03912 | 1 | 20 | -6.774955 | putative outer membrane usher protein EcpC | |
APE03913 | -1 | 20 | -4.602821 | Fimbria adhesin EcpD |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03902 | HTHFIS | 144 | 6e-41 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03904 | TYPE3OMGPROT | 28 | 0.031 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03905 | CARBMTKINASE | 30 | 0.012 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03906 | TCRTETB | 103 | 7e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03912 | PF00577 | 68 | 8e-14 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD |
68 | APE03922 | APE03933 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03922 | 2 | 11 | 0.746793 | Ferrichrome receptor FcuA | |
APE03923 | 0 | 12 | 1.754365 | putative protein YncE | |
APE03924 | -1 | 14 | 2.492552 | Phenylacetaldehyde dehydrogenase | |
APE03925 | -2 | 16 | 2.513897 | Gamma-glutamylputrescine oxidoreductase | |
APE03926 | -1 | 14 | 4.455806 | hypothetical protein | |
APE03927 | 0 | 13 | 3.264354 | hypothetical protein | |
APE03928 | 0 | 13 | 3.329551 | Serine/threonine exchanger SteT | |
APE03929 | 2 | 13 | 3.238689 | hypothetical protein | |
APE03930 | 1 | 11 | 2.831528 | Histone deacetylase-like amidohydrolase | |
APE03931 | 1 | 13 | 3.319216 | hypothetical protein | |
APE03932 | 1 | 16 | 2.098269 | HTH-type transcriptional regulator MalT | |
APE03933 | 0 | 16 | 3.230508 | Anaerobic sulfatase-maturating enzyme |
69 | APE03948 | APE04005 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03948 | -1 | 20 | 3.056852 | hypothetical protein | |
APE03949 | 0 | 20 | 4.571101 | Fructokinase | |
APE03950 | 0 | 20 | 3.487159 | Sucrose porin | |
APE03951 | 2 | 18 | 3.955162 | Negative regulator of SacY activity | |
APE03952 | 2 | 18 | 2.886213 | Sucrose-6-phosphate hydrolase | |
APE03953 | 2 | 16 | 0.362909 | Catabolite repressor/activator | |
APE03954 | 2 | 18 | 0.960063 | hypothetical protein | |
APE03955 | 2 | 17 | 1.211595 | Ribose import permease protein RbsC | |
APE03956 | 2 | 16 | 2.039630 | Ribose import ATP-binding protein RbsA | |
APE03957 | 2 | 17 | 2.482393 | Galactose/methyl galactoside import ATP-binding | |
APE03958 | 0 | 16 | 3.708832 | D-threitol-binding protein | |
APE03959 | 1 | 19 | 5.151659 | hypothetical protein | |
APE03960 | 0 | 16 | 4.299888 | Myo-inositol 2-dehydrogenase | |
APE03961 | -2 | 12 | 1.843044 | scyllo-inositol 2-dehydrogenase (NADP(+)) IolU | |
APE03962 | -2 | 13 | 1.784607 | hypothetical protein | |
APE03963 | -1 | 17 | -0.486993 | Inositol 2-dehydrogenase/D-chiro-inositol | |
APE03964 | 0 | 22 | -1.362606 | Inosose dehydratase | |
APE03965 | 1 | 22 | -2.498001 | hypothetical protein | |
APE03966 | 1 | 19 | -2.714025 | Lysine--tRNA ligase, heat inducible | |
APE03967 | 0 | 17 | -2.943989 | Dipeptide and tripeptide permease C | |
APE03968 | 1 | 18 | -3.979048 | Inducible lysine decarboxylase | |
APE03969 | 2 | 15 | -4.131354 | putative cadaverine/lysine antiporter | |
APE03970 | 2 | 15 | -3.870732 | putative cadaverine/lysine antiporter | |
APE03971 | 1 | 12 | -1.492165 | Transcriptional activator CadC | |
APE03972 | 1 | 13 | -1.015018 | hypothetical protein | |
APE03973 | 1 | 14 | -0.867223 | Lipid A biosynthesis lauroyltransferase | |
APE03974 | 1 | 15 | -1.340046 | hypothetical protein | |
APE03975 | 1 | 16 | -0.481549 | hypothetical protein | |
APE03976 | 1 | 16 | -0.122746 | Outer membrane usher protein HtrE | |
APE03977 | 1 | 25 | -4.023600 | hypothetical protein | |
APE03978 | -1 | 17 | -1.579482 | putative fimbrial chaperone YadV | |
APE03979 | -1 | 17 | -1.831696 | Major fimbrial subunit SMF-1 | |
APE03980 | -1 | 20 | -2.382059 | hypothetical protein | |
APE03981 | -3 | 15 | -0.751846 | hypothetical protein | |
APE03982 | -3 | 13 | -0.347746 | hypothetical protein | |
APE03983 | 0 | 13 | -0.139886 | Citrate synthase | |
APE03984 | 4 | 18 | -2.087775 | hypothetical protein | |
APE03985 | 3 | 16 | -1.682108 | 5-hydroxyisourate hydrolase | |
APE03987 | 3 | 17 | -1.504605 | *Bifunctional protein FolD protein | |
APE03988 | 2 | 17 | -1.601917 | putative protein YbcJ | |
APE03989 | 0 | 17 | -0.101590 | Cysteine--tRNA ligase | |
APE03990 | -1 | 16 | 0.899042 | Peptidyl-prolyl cis-trans isomerase B | |
APE03991 | 0 | 15 | 0.009469 | UDP-2,3-diacylglucosamine hydrolase | |
APE03992 | 0 | 10 | 2.263250 | hypothetical protein | |
APE03993 | -1 | 11 | 2.996761 | N5-carboxyaminoimidazole ribonucleotide mutase | |
APE03994 | 0 | 11 | 3.023694 | N5-carboxyaminoimidazole ribonucleotide | |
APE03995 | 0 | 11 | 2.520781 | tRNA 2-selenouridine synthase | |
APE03996 | 1 | 11 | 2.129382 | hypothetical protein | |
APE03997 | 3 | 16 | 2.802216 | hypothetical protein | |
APE03998 | 1 | 15 | -0.394880 | putative ABC transporter ATP-binding protein | |
APE03999 | 1 | 13 | -1.297041 | Thioesterase 1/protease 1/lysophospholipase L1 | |
APE04000 | 0 | 14 | -0.849801 | hypothetical protein | |
APE04001 | 1 | 15 | -1.251455 | Chaperedoxin | |
APE04002 | 0 | 13 | 0.958229 | putative iron export permease protein FetB | |
APE04003 | 0 | 12 | 2.114022 | putative iron export ATP-binding protein FetA | |
APE04004 | -1 | 13 | 3.424202 | Protein QmcA | |
APE04005 | 0 | 14 | 3.804107 | Inner membrane protein YbbJ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03950 | 56KDTSANTIGN | 30 | 0.022 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03964 | PF08280 | 31 | 0.009 | M protein trans-acting positive regulator | |
>PF08280#M protein trans-acting positive regulator | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03967 | TCRTETA | 29 | 0.030 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03974 | SACTRNSFRASE | 30 | 0.008 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03976 | PF00577 | 526 | e-179 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03977 | PF00577 | 35 | 1e-05 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03996 | ECOLNEIPORIN | 29 | 0.025 | E.coli/Neisseria porin superfamily signature. | |
>ECOLNEIPORIN#E.coli/Neisseria porin superfamily signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03998 | PF05272 | 28 | 0.024 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04000 | DHBDHDRGNASE | 79 | 1e-19 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
70 | APE04016 | APE04031 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04016 | 2 | 18 | 0.323168 | Ferrochelatase | |
APE04017 | 3 | 18 | 1.440784 | Adenylate kinase | |
APE04018 | 2 | 16 | 1.623875 | Chaperone protein HtpG | |
APE04019 | 1 | 15 | 3.036715 | Recombination protein RecR | |
APE04020 | 4 | 16 | 3.020240 | Nucleoid-associated protein YbaB | |
APE04021 | 4 | 18 | 2.950672 | DNA polymerase III subunit tau | |
APE04023 | 4 | 16 | 2.413068 | DNA polymerase III subunit tau | |
APE04024 | 3 | 13 | -0.392263 | Adenine phosphoribosyltransferase | |
APE04025 | 3 | 12 | -1.095891 | Inner membrane protein YbaN | |
APE04026 | 2 | 11 | -1.221345 | Primosomal replication protein N'' | |
APE04027 | 0 | 13 | -1.986942 | hypothetical protein | |
APE04028 | 0 | 12 | -2.350613 | ISNCY family transposase ISSen7 | |
APE04029 | 0 | 13 | -3.037890 | Mechanosensitive channel MscK | |
APE04030 | 1 | 17 | -4.096439 | HTH-type transcriptional regulator AcrR | |
APE04031 | 2 | 16 | -3.843038 | Multidrug efflux pump subunit AcrA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04018 | DNABINDINGHU | 30 | 0.005 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04023 | PF03544 | 31 | 0.007 | Gram-negative bacterial tonB protein | |
>PF03544#Gram-negative bacterial tonB protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04029 | GPOSANCHOR | 47 | 4e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04030 | HTHTETR | 185 | 2e-61 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04031 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
71 | APE04051 | APE04101 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04051 | 2 | 14 | -0.350096 | Maltose/maltodextrin import ATP-binding protein | |
APE04052 | 3 | 19 | 1.857726 | putative cyclic di-GMP phosphodiesterase PdeB | |
APE04053 | 2 | 21 | 3.056537 | Transcriptional repressor RcnR | |
APE04054 | 2 | 21 | 2.744646 | Nickel/cobalt efflux system RcnA | |
APE04055 | 2 | 22 | 1.343004 | Nickel/cobalt efflux system RcnA | |
APE04056 | -1 | 21 | 1.218214 | hypothetical protein | |
APE04057 | 0 | 24 | 1.165096 | Histidinol-phosphate aminotransferase | |
APE04058 | 0 | 25 | -3.265340 | hypothetical protein | |
APE04059 | -1 | 18 | -2.578138 | hypothetical protein | |
APE04060 | -2 | 14 | -0.418513 | hypothetical protein | |
APE04062 | -2 | 15 | -0.134626 | hypothetical protein | |
APE04063 | -2 | 12 | 0.871630 | DNA base-flipping protein | |
APE04064 | -1 | 13 | 0.980680 | putative lipoprotein YbaY | |
APE04065 | 0 | 13 | 1.593445 | Acyl-CoA thioesterase 2 | |
APE04066 | 1 | 14 | 1.672301 | Ammonia channel | |
APE04067 | 2 | 15 | 1.599103 | Nitrogen regulatory protein P-II 2 | |
APE04068 | 3 | 14 | 2.210402 | Multidrug resistance-like ATP-binding protein | |
APE04069 | 3 | 14 | 1.163043 | Multidrug resistance-like ATP-binding protein | |
APE04070 | 3 | 10 | 1.454029 | putative multidrug resistance ABC transporter | |
APE04071 | 1 | 11 | 0.609285 | DNA-binding transcriptional activator DecR | |
APE04072 | 1 | 10 | 0.524894 | DNA-binding transcriptional activator DecR | |
APE04073 | 0 | 12 | 0.553923 | N-(2-amino-2-carboxyethyl)-L-glutamate synthase | |
APE04074 | 2 | 10 | -0.185677 | HMP-PP phosphatase | |
APE04075 | 2 | 10 | -0.425414 | HTH-type transcriptional regulator SgrR | |
APE04076 | 1 | 15 | -2.529193 | 7-cyano-7-deazaguanine synthase | |
APE04077 | 1 | 17 | -2.675470 | Long-chain acyl-CoA thioesterase FadM | |
APE04078 | 1 | 18 | -2.584877 | hypothetical protein | |
APE04079 | 3 | 22 | -2.995590 | Peptidyl-prolyl cis-trans isomerase D | |
APE04080 | 5 | 25 | -3.779909 | DNA-binding protein HU-beta | |
APE04081 | 5 | 23 | -3.694759 | Lon protease | |
APE04083 | 5 | 26 | -3.822517 | ATP-dependent Clp protease ATP-binding subunit | |
APE04084 | 3 | 20 | -2.251706 | ATP-dependent Clp protease proteolytic subunit | |
APE04085 | 3 | 21 | -3.536489 | Trigger factor | |
APE04086 | 0 | 21 | -3.737371 | Trigger factor | |
APE04087 | 1 | 22 | -3.650855 | DNA-binding transcriptional regulator BolA | |
APE04088 | 2 | 22 | -3.757186 | hypothetical protein | |
APE04089 | 2 | 22 | -3.722761 | Anhydromuropeptide permease | |
APE04090 | 4 | 27 | -5.303628 | Cytochrome bo(3) ubiquinol oxidase subunit 2 | |
APE04091 | 4 | 24 | -3.760995 | Cytochrome bo(3) ubiquinol oxidase subunit 1 | |
APE04092 | 3 | 16 | -2.752430 | Cytochrome bo(3) ubiquinol oxidase subunit 3 | |
APE04093 | 1 | 15 | 0.031734 | Cytochrome bo(3) ubiquinol oxidase subunit 4 | |
APE04094 | -1 | 13 | 2.927595 | Protoheme IX farnesyltransferase | |
APE04095 | -2 | 14 | 3.853235 | hypothetical protein | |
APE04096 | 0 | 13 | 5.473333 | Pca regulon regulatory protein | |
APE04097 | -1 | 14 | 6.003177 | Pca operon regulatory protein | |
APE04098 | -1 | 13 | 5.080510 | Shikimate dehydrogenase (NADP(+)) | |
APE04099 | 0 | 13 | 4.865321 | 3-oxosteroid 1-dehydrogenase | |
APE04100 | -1 | 15 | 3.766931 | hypothetical protein | |
APE04101 | -1 | 14 | 3.632433 | 3-oxosteroid 1-dehydrogenase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04051 | PF05272 | 35 | 6e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04065 | ISCHRISMTASE | 30 | 0.007 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04069 | ACRIFLAVINRP | 31 | 0.006 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04074 | HTHFIS | 29 | 0.022 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04080 | DNABINDINGHU | 116 | 4e-38 | Prokaryotic integration host factor signature. | |
>DNABINDINGHU#Prokaryotic integration host factor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04081 | GPOSANCHOR | 34 | 0.002 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04089 | TCRTETB | 38 | 5e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
72 | APE04123 | APE04134 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04123 | 2 | 18 | -0.516303 | putative lipoprotein YajI | |
APE04124 | 2 | 21 | -1.105170 | Nucleoside-specific channel-forming protein Tsx | |
APE04125 | 2 | 18 | -0.988462 | hypothetical protein | |
APE04126 | 2 | 18 | -1.432949 | hypothetical protein | |
APE04127 | 2 | 18 | -1.355766 | Protein translocase subunit SecF | |
APE04128 | 2 | 18 | -1.683543 | Protein translocase subunit SecD | |
APE04129 | 2 | 13 | -2.658834 | Sec translocon accessory complex subunit YajC | |
APE04130 | 2 | 13 | -2.966001 | Queuine tRNA-ribosyltransferase | |
APE04131 | 1 | 14 | -3.321570 | S-adenosylmethionine:tRNA | |
APE04132 | 2 | 19 | -3.756755 | Acyl carrier protein phosphodiesterase | |
APE04133 | 3 | 20 | -5.560995 | Alkyl hydroperoxide reductase C | |
APE04134 | 2 | 21 | -4.865972 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04124 | CHANNELTSX | 537 | 0.0 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04125 | ARGREPRESSOR | 32 | 9e-04 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04127 | SECFTRNLCASE | 342 | e-120 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04128 | SECFTRNLCASE | 69 | 5e-15 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. |
73 | APE04177 | APE04192 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04177 | -1 | 14 | 3.906907 | hypothetical protein | |
APE04178 | -1 | 16 | 3.759755 | Alpha-ketoglutarate-dependent taurine | |
APE04179 | 0 | 16 | 4.481997 | Putative aliphatic sulfonates transport permease | |
APE04180 | 0 | 16 | 4.198388 | Taurine import ATP-binding protein TauB | |
APE04181 | -1 | 16 | 4.553142 | Taurine-binding periplasmic protein | |
APE04182 | -1 | 17 | 4.002797 | Homocysteine S-methyltransferase | |
APE04183 | -1 | 17 | 2.941836 | Amino-acid permease RocC | |
APE04184 | -1 | 21 | 3.019720 | putative amino acid permease YhdG | |
APE04185 | -1 | 21 | 2.283282 | Ethanolamine ammonia-lyase heavy chain | |
APE04186 | 0 | 20 | 1.881592 | Ethanolamine ammonia-lyase light chain | |
APE04187 | -1 | 21 | 1.038177 | Leu/Ile/Val-binding protein | |
APE04188 | -1 | 21 | 1.559352 | High-affinity branched-chain amino acid | |
APE04189 | -1 | 22 | 2.213900 | hypothetical protein | |
APE04190 | -1 | 21 | 3.168036 | Lipopolysaccharide export system ATP-binding | |
APE04191 | -1 | 21 | 4.424663 | High-affinity branched-chain amino acid | |
APE04192 | 1 | 21 | 4.522498 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04179 | SALSPVBPROT | 30 | 0.014 | Salmonella virulence plasmid 65kDa B protein signature. | |
>SALSPVBPROT#Salmonella virulence plasmid 65kDa B protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04188 | FERRIBNDNGPP | 29 | 0.018 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. |
74 | APE04211 | APE04259 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04211 | -1 | 15 | -3.006552 | Outer membrane porin PhoE | |
APE04212 | -1 | 23 | -6.136311 | Glutamate 5-kinase | |
APE04213 | 0 | 37 | -10.098502 | Gamma-glutamyl phosphate reductase | |
APE04215 | 3 | 62 | -16.334629 | *Prophage integrase IntS | |
APE04216 | 5 | 69 | -19.221140 | hypothetical protein | |
APE04217 | 4 | 69 | -19.427011 | hypothetical protein | |
APE04218 | 6 | 73 | -19.780302 | hypothetical protein | |
APE04219 | 6 | 70 | -17.330241 | putative type I restriction enzymeP M protein | |
APE04220 | 6 | 68 | -16.964638 | hypothetical protein | |
APE04221 | 5 | 62 | -16.110157 | hypothetical protein | |
APE04222 | 4 | 60 | -15.402045 | hypothetical protein | |
APE04223 | 6 | 58 | -14.730544 | hypothetical protein | |
APE04224 | 6 | 45 | -12.777481 | hypothetical protein | |
APE04226 | 8 | 49 | -16.892991 | hypothetical protein | |
APE04227 | 8 | 50 | -15.342086 | hypothetical protein | |
APE04228 | 7 | 44 | -12.559105 | hypothetical protein | |
APE04229 | 7 | 39 | -9.710102 | hypothetical protein | |
APE04230 | 6 | 34 | -7.077688 | hypothetical protein | |
APE04231 | 8 | 30 | -4.195324 | hypothetical protein | |
APE04232 | 10 | 28 | -2.560386 | GTPase Era | |
APE04233 | 8 | 27 | -2.556564 | hypothetical protein | |
APE04234 | 9 | 27 | -3.109272 | hypothetical protein | |
APE04235 | 9 | 29 | -4.695785 | hypothetical protein | |
APE04236 | 10 | 31 | -6.024273 | hypothetical protein | |
APE04237 | 3 | 29 | -4.959866 | hypothetical protein | |
APE04238 | 2 | 29 | -4.868557 | Antirestriction protein KlcA | |
APE04239 | 1 | 27 | -4.036921 | hypothetical protein | |
APE04240 | 0 | 25 | -3.467510 | hypothetical protein | |
APE04241 | 0 | 26 | -2.432750 | Antitoxin YfjZ | |
APE04242 | -1 | 25 | -1.880441 | Serine/threonine-protein kinase PknK | |
APE04243 | 0 | 22 | -0.071170 | Acetoin:2,6-dichlorophenolindophenol | |
APE04244 | 0 | 22 | 0.272222 | Acetoin:2,6-dichlorophenolindophenol | |
APE04245 | 0 | 24 | -0.785589 | Acetoin:2,6-dichlorophenolindophenol | |
APE04246 | -2 | 26 | -1.630886 | hypothetical protein | |
APE04247 | -1 | 25 | -3.205887 | Dihydrolipoyllysine-residue acetyltransferase | |
APE04248 | 0 | 24 | -4.650925 | Dihydrolipoyl dehydrogenase | |
APE04249 | 1 | 27 | -6.701308 | hypothetical protein | |
APE04250 | 2 | 24 | -6.958233 | 3-hydroxy-5-phosphonooxypentane-2,4-dione | |
APE04251 | 2 | 22 | -7.100674 | Glycerol uptake operon antiterminator regulatory | |
APE04252 | 1 | 23 | -7.173056 | Glycerol kinase | |
APE04253 | 1 | 21 | -6.052010 | L-xylulose/3-keto-L-gulonate kinase | |
APE04254 | 0 | 18 | -4.224165 | L-xylulose/3-keto-L-gulonate kinase | |
APE04255 | 0 | 18 | -4.142985 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE04256 | 0 | 14 | -3.070020 | Formate dehydrogenase, mitochondrial | |
APE04257 | 0 | 11 | -0.603894 | PTS system galactitol-specific EIIC component | |
APE04258 | -1 | 18 | 2.583316 | Glutathione S-transferase GstB | |
APE04259 | 0 | 21 | 3.092223 | putative protein YjhP |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04211 | ECOLIPORIN | 536 | 0.0 | E.coli/Salmonella-type porin signature. | |
>ECOLIPORIN#E.coli/Salmonella-type porin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04212 | CARBMTKINASE | 38 | 4e-05 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04223 | ISCHRISMTASE | 30 | 0.023 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04246 | RTXTOXIND | 30 | 0.011 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04255 | DHBDHDRGNASE | 102 | 2e-28 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
75 | APE04287 | APE04311 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04287 | -1 | 21 | -4.710826 | Cysteine/O-acetylserine efflux protein | |
APE04288 | 0 | 18 | -4.572536 | HTH-type transcriptional activator CmpR | |
APE04290 | 0 | 20 | -4.584053 | *DNA polymerase III subunit epsilon | |
APE04291 | 1 | 21 | -3.877786 | Ribonuclease HI | |
APE04292 | 1 | 20 | -3.521900 | hypothetical protein | |
APE04293 | 1 | 18 | -3.006398 | Hydroxyacylglutathione hydrolase | |
APE04294 | 0 | 15 | -0.730777 | Membrane-bound lytic murein transglycosylase D | |
APE04295 | -2 | 12 | -0.560662 | putative methyltransferase YcgJ | |
APE04296 | -3 | 13 | -1.363541 | hypothetical protein | |
APE04297 | -2 | 14 | -1.865008 | Purine efflux pump PbuE | |
APE04298 | -2 | 15 | -2.277238 | Inner membrane transport protein YdhP | |
APE04299 | -2 | 16 | -3.472246 | HTH-type transcriptional regulator DmlR | |
APE04300 | -2 | 20 | -3.827983 | 2,5-diketo-D-gluconic acid reductase B | |
APE04308 | -1 | 18 | -3.325906 | ***D-glycero-beta-D-manno-heptose-1,7-bisphosphate | |
APE04309 | -2 | 16 | -2.879297 | Methionine import ATP-binding protein MetN | |
APE04310 | 0 | 16 | -2.154576 | D-methionine transport system permease protein | |
APE04311 | 2 | 14 | -1.632671 | D-methionine-binding lipoprotein MetQ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04298 | TCRTETA | 54 | 1e-10 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
76 | APE04329 | APE04343 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04329 | 2 | 20 | -3.188180 | Lipid-A-disaccharide synthase | |
APE04330 | 2 | 20 | -4.033435 | Acyl-[acyl-carrier-protein]--UDP-N- | |
APE04331 | 2 | 20 | -3.903871 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | |
APE04332 | 1 | 17 | -3.454724 | UDP-3-O-(3-hydroxymyristoyl)glucosamine | |
APE04333 | 2 | 17 | -3.835051 | Chaperone protein Skp | |
APE04334 | 2 | 18 | -3.573462 | Outer membrane protein assembly factor BamA | |
APE04335 | -2 | 20 | -1.926424 | Regulator of sigma-E protease RseP | |
APE04336 | -1 | 18 | -1.656133 | Phosphatidate cytidylyltransferase | |
APE04337 | 0 | 17 | -2.184451 | Phosphatidate cytidylyltransferase | |
APE04338 | 2 | 25 | -3.485194 | hypothetical protein | |
APE04339 | 3 | 31 | -3.656883 | Ditrans,polycis-undecaprenyl-diphosphate | |
APE04340 | 2 | 32 | -3.863541 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | |
APE04341 | 3 | 25 | -2.807625 | Ribosome-recycling factor | |
APE04342 | 2 | 24 | -2.460991 | Uridylate kinase | |
APE04343 | 3 | 22 | -2.767721 | Elongation factor Ts |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04342 | CARBMTKINASE | 30 | 0.009 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. |
77 | APE04355 | APE04381 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04355 | 1 | 14 | 3.325243 | Vitamin B12-binding protein | |
APE04356 | 0 | 14 | 3.549225 | hypothetical protein | |
APE04357 | 1 | 15 | 3.873447 | Iron-sulfur cluster insertion protein ErpA | |
APE04358 | -1 | 14 | 3.224997 | H(+)/Cl(-) exchange transporter ClcA | |
APE04359 | 0 | 15 | 3.280393 | Glutamate-1-semialdehyde 2,1-aminomutase | |
APE04360 | 0 | 15 | 3.360694 | Iron(3+)-hydroxamate import system permease | |
APE04361 | 2 | 14 | 2.108574 | Iron(3+)-hydroxamate-binding protein FhuD | |
APE04362 | 2 | 12 | 1.699949 | Iron(3+)-hydroxamate import ATP-binding protein | |
APE04363 | 1 | 10 | 0.867295 | Ferrichrome outer membrane transporter/phage | |
APE04364 | -1 | 10 | 0.781183 | Penicillin-binding protein 1B | |
APE04365 | -1 | 15 | 1.502652 | hypothetical protein | |
APE04366 | -1 | 15 | 2.181554 | Pullulanase | |
APE04367 | -1 | 17 | 2.350311 | Pullulanase | |
APE04368 | -2 | 17 | 3.081635 | Type II secretion system protein C | |
APE04369 | 0 | 20 | 4.458462 | Secretin PulD | |
APE04370 | 4 | 23 | 6.705889 | Type II secretion system protein E | |
APE04371 | 3 | 24 | 6.544246 | Type II secretion system protein F | |
APE04372 | 3 | 23 | 6.725994 | Type II secretion system protein G | |
APE04373 | 4 | 23 | 7.107600 | Putative type II secretion system protein H | |
APE04374 | 5 | 22 | 7.185391 | hypothetical protein | |
APE04375 | 5 | 22 | 7.666960 | Type II secretion system protein J | |
APE04376 | 7 | 19 | 8.359466 | Putative type II secretion system protein K | |
APE04377 | 7 | 20 | 8.423464 | Type II secretion system protein L | |
APE04378 | 3 | 19 | 6.317631 | hypothetical protein | |
APE04379 | 2 | 16 | 5.363325 | Type II secretion system protein M | |
APE04380 | 1 | 13 | 4.928895 | Type II secretion system protein N | |
APE04381 | 1 | 11 | 3.865504 | ATP-dependent RNA helicase HrpB |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04355 | FERRIBNDNGPP | 48 | 1e-08 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04361 | FERRIBNDNGPP | 430 | e-155 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04364 | 56KDTSANTIGN | 35 | 0.002 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04368 | BCTERIALGSPC | 214 | 4e-71 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04369 | BCTERIALGSPD | 839 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04371 | BCTERIALGSPF | 512 | 0.0 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04372 | BCTERIALGSPG | 243 | 2e-86 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04373 | BCTERIALGSPH | 177 | 8e-60 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04374 | BCTERIALGSPG | 34 | 6e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04375 | BCTERIALGSPG | 33 | 3e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G |
78 | APE04464 | APE04480 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04464 | -1 | 12 | -3.563494 | 3-isopropylmalate dehydratase small subunit 1 | |
APE04465 | 0 | 13 | -3.343205 | NADH oxidase | |
APE04466 | 0 | 14 | -4.965331 | hypothetical protein | |
APE04467 | -1 | 14 | -5.112378 | Shikimate dehydrogenase (NADP(+)) | |
APE04468 | 0 | 17 | -6.229735 | Inner membrane transport protein YdiM | |
APE04469 | 0 | 13 | -4.117309 | Inner membrane transport protein YdiM | |
APE04470 | 0 | 16 | -4.064415 | 3-dehydroquinate dehydratase | |
APE04471 | 1 | 14 | -2.395940 | HTH-type transcriptional regulator GltC | |
APE04472 | 1 | 11 | -0.642845 | D-galactonate transporter | |
APE04473 | 2 | 11 | 1.176029 | putative glucarate transporter | |
APE04474 | 4 | 12 | 2.594892 | Sugar efflux transporter A | |
APE04476 | 4 | 12 | 2.749027 | hypothetical protein | |
APE04477 | 3 | 13 | 2.836457 | HTH-type transcriptional regulator SgrR | |
APE04479 | 2 | 14 | 3.509800 | Thiamine-binding periplasmic protein | |
APE04480 | 2 | 14 | 3.528305 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04468 | TCRTETA | 36 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04472 | TCRTETA | 31 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04473 | TCRTETA | 38 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04474 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04477 | NEISSPPORIN | 37 | 2e-04 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. |
79 | APE04586 | APE04632 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04586 | 0 | 15 | -3.193449 | Ribosomal RNA small subunit methyltransferase C | |
APE04590 | 1 | 23 | -5.044722 | ***hypothetical protein | |
APE04591 | 0 | 22 | -4.826173 | hypothetical protein | |
APE04592 | -1 | 23 | -4.336924 | Ferric iron reductase protein FhuF | |
APE04593 | -2 | 25 | -6.076426 | Lichenan permease IIC component | |
APE04594 | -1 | 32 | -6.919096 | hypothetical protein | |
APE04595 | 0 | 29 | -5.935886 | hypothetical protein | |
APE04596 | -1 | 26 | -4.051565 | Transcriptional activator protein BglJ | |
APE04597 | -2 | 21 | -3.212200 | hypothetical protein | |
APE04598 | -1 | 20 | -2.555696 | Putative transcription factor YjjQ | |
APE04599 | 0 | 17 | -0.728193 | HTH-type transcriptional activator RhaR | |
APE04600 | 1 | 13 | -0.662314 | p-hydroxybenzoate hydroxylase | |
APE04601 | 1 | 14 | -1.276045 | p-hydroxybenzoate hydroxylase | |
APE04602 | -1 | 11 | -2.590745 | Inner membrane protein YjjP | |
APE04603 | -1 | 11 | -2.749585 | hypothetical protein | |
APE04604 | -2 | 11 | -3.121320 | Primosomal protein 1 | |
APE04605 | -2 | 11 | -3.334878 | DNA replication protein DnaC | |
APE04606 | -2 | 10 | -3.081276 | hypothetical protein | |
APE04607 | -2 | 10 | -2.896213 | Phosphoglycerol transferase I | |
APE04608 | -1 | 15 | -3.845904 | ISNCY family transposase ISRor2 | |
APE04609 | 0 | 15 | -5.015240 | Fructosamine deglycase FrlB | |
APE04610 | -1 | 18 | -3.498636 | Glutamine--fructose-6-phosphate aminotransferase | |
APE04611 | -1 | 18 | -4.222180 | PTS system mannose-specific EIID component | |
APE04612 | 0 | 20 | -3.996166 | N-acetylgalactosamine permease IIC component 1 | |
APE04613 | -1 | 23 | -4.611338 | PTS system sorbose-specific EIIB component | |
APE04614 | -1 | 20 | -4.227162 | hypothetical protein | |
APE04615 | -1 | 20 | -3.975586 | Anaerobic nitric oxide reductase transcription | |
APE04616 | 0 | 20 | -5.142003 | hypothetical protein | |
APE04617 | -1 | 19 | -3.662161 | Altronate oxidoreductase | |
APE04618 | -1 | 18 | -3.312443 | L-galactonate-5-dehydrogenase | |
APE04619 | -1 | 15 | -1.816022 | putative HTH-type transcriptional regulator | |
APE04620 | 1 | 17 | -0.213821 | putative L-galactonate transporter | |
APE04621 | 0 | 15 | 1.170406 | putative L-galactonate transporter | |
APE04622 | 1 | 16 | 1.838848 | Mycothiol acetyltransferase | |
APE04623 | 2 | 16 | 0.946689 | hypothetical protein | |
APE04624 | 2 | 17 | 0.415856 | HTH-type transcriptional regulator HexR | |
APE04625 | 1 | 17 | 0.947105 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | |
APE04626 | 3 | 15 | 1.194906 | putative 2-dehydro-3-deoxygalactonokinase DgoK1 | |
APE04627 | 3 | 15 | 1.810677 | Cation/acetate symporter ActP | |
APE04628 | 2 | 16 | 2.849670 | hypothetical protein | |
APE04629 | 2 | 15 | 3.781790 | Putative reactive intermediate deaminase TdcF | |
APE04630 | 2 | 15 | 3.907087 | D-aminoacylase | |
APE04631 | 3 | 15 | 4.167876 | D-threonine aldolase | |
APE04632 | 1 | 14 | 3.940388 | Delta(1)-pyrroline-2-carboxylate/Delta(1)- |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04592 | 2FE2SRDCTASE | 372 | e-133 | Ferric iron reductase signature. | |
>2FE2SRDCTASE#Ferric iron reductase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04608 | FLGFLIH | 28 | 0.033 | Flagellar assembly protein FliH signature. | |
>FLGFLIH#Flagellar assembly protein FliH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04615 | HTHFIS | 157 | 3e-43 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04621 | TCRTETA | 29 | 0.021 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04622 | SACTRNSFRASE | 36 | 5e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04623 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04630 | UREASE | 50 | 2e-08 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. |
80 | APE04666 | APE04676 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04666 | -1 | 17 | -5.262738 | Transcriptional regulator SlyA | |
APE04667 | -1 | 12 | -6.074157 | hypothetical protein | |
APE04668 | -1 | 12 | -5.578573 | HTH-type transcriptional regulator NorG | |
APE04669 | 0 | 12 | -5.724740 | hypothetical protein | |
APE04670 | 0 | 11 | -4.675637 | hypothetical protein | |
APE04671 | -1 | 14 | -4.870545 | hypothetical protein | |
APE04672 | -2 | 9 | -2.142497 | hypothetical protein | |
APE04673 | 3 | 15 | 0.904224 | Glutathione transferase FosA | |
APE04674 | 2 | 15 | 0.408682 | HTH-type transcriptional regulator SyrM 1 | |
APE04675 | 2 | 13 | -1.499032 | Glutathione-regulated potassium-efflux system | |
APE04676 | 2 | 11 | -1.709529 | Autoinducer 2 import system permease protein |
81 | APE04699 | APE04751 | Y ![]() | Y ![]() | Y | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04699 | 0 | 20 | 3.154692 | Cation efflux system protein CusB | |
APE04700 | 0 | 22 | 3.444061 | Cation efflux system protein CusA | |
APE04701 | 0 | 23 | 5.559436 | hypothetical protein | |
APE04702 | 2 | 25 | 6.431598 | Outer membrane lipoprotein Blc | |
APE04703 | 3 | 25 | 6.660086 | HTH-type transcriptional regulator MlrA | |
APE04704 | 2 | 25 | 6.470400 | HTH-type transcriptional regulator MlrA | |
APE04705 | 2 | 26 | 6.858272 | hypothetical protein | |
APE04706 | 3 | 25 | 7.253891 | hypothetical protein | |
APE04707 | 3 | 25 | 7.522703 | hypothetical protein | |
APE04708 | 3 | 27 | 6.541804 | hypothetical protein | |
APE04709 | 3 | 25 | 6.118053 | hypothetical protein | |
APE04710 | -1 | 26 | 4.848290 | Tuberculostearic acid methyltransferase UfaA1 | |
APE04711 | -2 | 20 | 2.432330 | hypothetical protein | |
APE04712 | -2 | 15 | 0.042962 | hypothetical protein | |
APE04713 | -1 | 14 | -1.170575 | hypothetical protein | |
APE04714 | 1 | 14 | -1.387907 | hypothetical protein | |
APE04715 | 2 | 12 | -2.199516 | Maltoporin | |
APE04716 | 0 | 10 | -2.588520 | Xylose isomerase | |
APE04717 | 1 | 16 | -6.880845 | putative symporter YjmB | |
APE04718 | 1 | 17 | -6.987625 | Putative glycoside/cation symporter YagG | |
APE04719 | 0 | 20 | -7.254468 | Beta-xylosidase | |
APE04720 | 1 | 33 | -10.657921 | hypothetical protein | |
APE04721 | 1 | 36 | -12.456283 | hypothetical protein | |
APE04722 | 3 | 67 | -21.262268 | hypothetical protein | |
APE04723 | 3 | 68 | -20.848136 | hypothetical protein | |
APE04724 | 5 | 75 | -21.541236 | IS3 family transposase IS1400 | |
APE04726 | 8 | 84 | -23.643724 | hypothetical protein | |
APE04727 | 8 | 82 | -23.024563 | hypothetical protein | |
APE04728 | 8 | 80 | -22.832317 | hypothetical protein | |
APE04729 | 9 | 75 | -21.074042 | hypothetical protein | |
APE04730 | 6 | 60 | -15.685894 | hypothetical protein | |
APE04731 | 1 | 26 | -4.392068 | putative BsuMI modification methylase subunit | |
APE04732 | 0 | 19 | 3.004691 | hypothetical protein | |
APE04734 | 0 | 19 | 4.169665 | IS3 family transposase IS1400 | |
APE04735 | 1 | 21 | 4.769541 | hypothetical protein | |
APE04737 | 2 | 23 | 5.007499 | *Carbonic anhydrase 2 | |
APE04738 | 1 | 24 | 4.580557 | C4-dicarboxylic acid transporter DauA | |
APE04739 | 1 | 27 | 3.642961 | hypothetical protein | |
APE04740 | 0 | 26 | 3.061105 | Aldehyde reductase Ahr | |
APE04741 | 0 | 25 | 2.465716 | sn-glycerol-3-phosphate transport system | |
APE04742 | -1 | 24 | 2.219020 | Lactose transport system permease protein LacG | |
APE04743 | -2 | 22 | 1.175364 | 3',5'-cyclic adenosine monophosphate | |
APE04744 | -1 | 21 | 1.120929 | sn-glycerol-3-phosphate import ATP-binding | |
APE04745 | -1 | 23 | 1.968783 | sn-glycerol-3-phosphate-binding periplasmic | |
APE04746 | -1 | 21 | 2.886079 | Inosose dehydratase | |
APE04747 | -1 | 20 | 2.741548 | Inosose dehydratase | |
APE04748 | 0 | 20 | 3.088658 | hypothetical protein | |
APE04749 | 0 | 20 | 3.657696 | Inositol 2-dehydrogenase/D-chiro-inositol | |
APE04750 | 0 | 19 | 3.678805 | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione | |
APE04751 | 0 | 16 | 3.000995 | 5-dehydro-2-deoxygluconokinase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04700 | ACRIFLAVINRP | 683 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04702 | BCTLIPOCALIN | 233 | 1e-81 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04706 | DHBDHDRGNASE | 62 | 2e-13 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04717 | TCRTETB | 28 | 0.049 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04744 | PF05272 | 35 | 6e-04 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04745 | MALTOSEBP | 42 | 4e-06 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
82 | APE04881 | APE04897 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04881 | 3 | 15 | -1.612829 | Fumarate reductase iron-sulfur subunit | |
APE04882 | 4 | 18 | -1.802349 | Fumarate reductase subunit C | |
APE04883 | 1 | 20 | -2.605550 | Fumarate reductase subunit D | |
APE04884 | 0 | 15 | -2.050169 | Outer membrane lipoprotein Blc | |
APE04885 | 1 | 26 | -6.454554 | Guanidinium exporter | |
APE04887 | 2 | 42 | -12.284578 | hypothetical protein | |
APE04888 | 0 | 48 | -14.138433 | hypothetical protein | |
APE04889 | 0 | 52 | -15.522830 | Elongation factor P | |
APE04890 | 1 | 57 | -16.148726 | L-lysine 2,3-aminomutase | |
APE04891 | 3 | 67 | -18.388251 | hypothetical protein | |
APE04892 | 4 | 67 | -18.052076 | Colicin V secretion protein CvaA | |
APE04893 | 2 | 55 | -14.092067 | Lactococcin-G-processing and transport | |
APE04894 | 2 | 53 | -12.859652 | hypothetical protein | |
APE04895 | 2 | 49 | -11.292493 | putative major fimbrial subunit LpfA | |
APE04896 | 1 | 37 | -8.354622 | Outer membrane usher protein FimD | |
APE04897 | 0 | 30 | -4.706079 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04884 | BCTLIPOCALIN | 249 | 4e-88 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04892 | RTXTOXIND | 118 | 1e-31 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04896 | PF00577 | 570 | 0.0 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD |
83 | APE04971 | APE04984 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04971 | 0 | 19 | -3.672839 | Redox-sensitive transcriptional activator SoxR | |
APE04972 | 0 | 19 | -3.458982 | Regulatory protein SoxS | |
APE04973 | 0 | 19 | -2.912362 | putative cyclic di-GMP phosphodiesterase PdeC | |
APE04974 | 2 | 20 | -2.790129 | putative cyclic di-GMP phosphodiesterase PdeC | |
APE04975 | 2 | 18 | -1.214625 | hypothetical protein | |
APE04976 | -1 | 16 | 0.589049 | hypothetical protein | |
APE04977 | 0 | 16 | 1.915607 | hypothetical protein | |
APE04978 | 1 | 16 | 1.044824 | hypothetical protein | |
APE04979 | -1 | 18 | -1.404369 | Vitamin B12 import ATP-binding protein BtuD | |
APE04980 | -2 | 18 | -1.020764 | hypothetical protein | |
APE04981 | -2 | 20 | -2.106775 | Catabolite control protein A | |
APE04982 | 0 | 19 | -3.278768 | Inositol-1-monophosphatase | |
APE04983 | 0 | 18 | -3.973280 | Anti-adapter protein IraM | |
APE04984 | -1 | 16 | -3.111962 | Outer membrane protein assembly factor BamA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04979 | MALTOSEBP | 29 | 0.036 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
84 | APE05012 | APE05033 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE05012 | 2 | 23 | -2.299782 | hypothetical protein | |
APE05013 | 3 | 25 | -3.235393 | Maltoporin | |
APE05014 | 2 | 19 | -3.197072 | Maltoporin | |
APE05015 | 1 | 17 | -2.230544 | Maltose/maltodextrin import ATP-binding protein | |
APE05016 | 1 | 18 | -3.175710 | Maltose/maltodextrin import ATP-binding protein | |
APE05017 | 1 | 18 | -4.282824 | Maltose/maltodextrin-binding periplasmic | |
APE05018 | 2 | 17 | -4.782792 | hypothetical protein | |
APE05019 | 2 | 16 | -4.666926 | Maltose/maltodextrin transport system permease | |
APE05020 | 2 | 20 | -4.934881 | Maltose/maltodextrin transport system permease | |
APE05021 | 3 | 25 | -6.275524 | Protein PsiE | |
APE05022 | 3 | 25 | -5.319407 | hypothetical protein | |
APE05023 | 0 | 14 | -3.394624 | Inner membrane protein YgaZ | |
APE05024 | 0 | 14 | -1.465178 | hypothetical protein | |
APE05025 | -1 | 13 | -0.568529 | 2-iminobutanoate/2-iminopropanoate deaminase | |
APE05026 | -1 | 13 | -0.739575 | hypothetical protein | |
APE05027 | 1 | 15 | -1.018012 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose | |
APE05028 | -1 | 15 | -1.465434 | Glucose-6-phosphate isomerase | |
APE05030 | -1 | 14 | -1.828753 | Lysine-sensitive aspartokinase 3 | |
APE05031 | -1 | 14 | -2.676523 | Pantothenate precursors transporter PanS | |
APE05032 | 0 | 16 | -4.849251 | hypothetical protein | |
APE05033 | 0 | 16 | -3.763045 | Dual-specificity RNA pseudouridine synthase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05016 | PF05272 | 34 | 5e-05 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05017 | MALTOSEBP | 756 | 0.0 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05026 | SACTRNSFRASE | 27 | 0.036 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05028 | BCTERIALGSPD | 32 | 0.007 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05032 | 56KDTSANTIGN | 25 | 0.038 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein |
85 | APE05175 | APE05184 | Y ![]() | N | N | Genomic Island |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE05175 | 0 | 15 | -3.385086 | UDP-N-acetylglucosamine 2-epimerase | |
APE05176 | 1 | 18 | -3.451556 | ECA polysaccharide chain length modulation | |
APE05177 | 0 | 16 | -2.695135 | Undecaprenyl-phosphate | |
APE05178 | 1 | 16 | -2.191476 | Transcription termination factor Rho | |
APE05179 | 0 | 18 | -3.005694 | Transcription termination factor Rho | |
APE05180 | 0 | 19 | -3.155190 | Thioredoxin 1 | |
APE05181 | 0 | 19 | -3.069364 | ATP-dependent RNA helicase RhlB | |
APE05182 | 0 | 13 | -3.012170 | Guanosine-5'-triphosphate,3'-diphosphate | |
APE05183 | 0 | 14 | -4.078666 | PCP degradation transcriptional activation | |
APE05184 | 0 | 14 | -4.455370 | hypothetical protein |
86 | APE05269 | APE05283 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE05269 | -1 | 12 | 3.069902 | Alpha-galactosidase | |
APE05270 | 1 | 18 | 2.326935 | HTH-type transcriptional regulator RafR | |
APE05271 | 3 | 21 | 0.392810 | HTH-type transcriptional regulator SutR | |
APE05272 | 3 | 21 | -1.948428 | hypothetical protein | |
APE05273 | 3 | 25 | -4.208710 | hypothetical protein | |
APE05274 | 3 | 24 | -5.220090 | hypothetical protein | |
APE05275 | 4 | 29 | -7.873711 | Ascorbate-specific PTS system EIIA component | |
APE05276 | 3 | 34 | -9.428843 | hypothetical protein | |
APE05277 | 3 | 35 | -9.409476 | D-tagatose-1,6-bisphosphate aldolase subunit | |
APE05278 | 4 | 34 | -9.704629 | hypothetical protein | |
APE05279 | 3 | 30 | -6.779818 | Ascorbate-specific PTS system EIIC component | |
APE05280 | 1 | 32 | -6.575608 | hypothetical protein | |
APE05281 | 1 | 17 | -3.057033 | Pyrophosphate--fructose 6-phosphate | |
APE05282 | 1 | 16 | -0.960779 | Pyrophosphate--fructose 6-phosphate | |
APE05283 | 2 | 18 | -0.747710 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05271 | HTHTETR | 30 | 0.006 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. |
87 | APE05294 | APE05316 | Y ![]() | Y ![]() | N | Pathogenicity Island (biased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE05294 | 2 | 16 | -2.605550 | hypothetical protein | |
APE05295 | 3 | 21 | -3.451988 | hypothetical protein | |
APE05296 | 4 | 29 | -3.638760 | D-aminoacyl-tRNA deacylase | |
APE05297 | 2 | 26 | -3.268942 | hypothetical protein | |
APE05298 | 1 | 22 | -2.482092 | Alpha-D-glucose 1-phosphate phosphatase YihX | |
APE05299 | 2 | 21 | -2.380563 | GTP-binding protein TypA/BipA | |
APE05300 | -2 | 15 | -2.494419 | GTP-binding protein TypA/BipA | |
APE05302 | -2 | 14 | -2.084720 | Glutamine synthetase | |
APE05303 | -1 | 15 | -1.871404 | Sensory histidine kinase/phosphatase NtrB | |
APE05304 | 0 | 14 | -1.969673 | DNA-binding transcriptional regulator NtrC | |
APE05305 | 1 | 14 | -2.890761 | Oxygen-independent coproporphyrinogen III | |
APE05306 | 1 | 15 | -3.080708 | Oxygen-independent coproporphyrinogen III | |
APE05307 | 1 | 15 | -3.371271 | Der GTPase-activating protein YihI | |
APE05309 | 0 | 15 | -3.624157 | putative GTP-binding protein EngB | |
APE05311 | 0 | 15 | -3.930329 | DNA polymerase I | |
APE05312 | -1 | 20 | -5.831282 | putative acyltransferase YihG | |
APE05313 | -1 | 24 | -6.049047 | putative acyltransferase YihG | |
APE05314 | 0 | 25 | -5.546099 | Thiol:disulfide interchange protein DsbA | |
APE05315 | -1 | 24 | -4.483819 | Stress response kinase A | |
APE05316 | 1 | 22 | -3.780059 | Protein YihD |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05299 | TCRTETOQM | 66 | 2e-13 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05300 | TCRTETOQM | 123 | 3e-36 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05304 | HTHFIS | 600 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05307 | SECA | 28 | 0.022 | SecA protein signature. | |
>SECA#SecA protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05312 | PRPHPHLPASEC | 30 | 0.010 | Prokaryotic zinc-dependent phospholipase C signature. | |
>PRPHPHLPASEC#Prokaryotic zinc-dependent phospholipase C signature. |
88 | APE00042 | APE00051 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00042 | -1 | 11 | 2.237427 | Transcriptional regulatory protein UhpA | |
APE00043 | -1 | 10 | 1.898986 | Signal transduction histidine-protein | |
APE00044 | -1 | 13 | -0.032333 | Membrane sensor protein UhpC | |
APE00045 | -1 | 15 | -2.452553 | Hexose-6-phosphate:phosphate antiporter | |
APE00046 | 1 | 19 | -2.026998 | HTH-type transcriptional regulator SyrM 1 | |
APE00047 | 0 | 18 | -2.457389 | hypothetical protein | |
APE00048 | 0 | 18 | -1.887763 | hypothetical protein | |
APE00049 | 1 | 14 | -1.182857 | hypothetical protein | |
APE00050 | -1 | 15 | -0.778049 | hypothetical protein | |
APE00051 | -2 | 15 | 0.046772 | Purine ribonucleoside efflux pump NepI |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00042 | HTHFIS | 64 | 2e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00044 | TCRTETB | 37 | 1e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00045 | TCRTETB | 35 | 7e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00046 | PF05043 | 30 | 0.020 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00051 | TCRTETA | 32 | 0.003 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
89 | APE00070 | APE00077 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00070 | -1 | 20 | 4.491638 | Bicyclomycin resistance protein | |
APE00071 | -2 | 18 | 4.115471 | Outer membrane protein OprM | |
APE00072 | -1 | 19 | 3.896744 | hypothetical protein | |
APE00073 | -1 | 18 | 4.218434 | Multidrug resistance protein MexB | |
APE00074 | 1 | 15 | 3.484760 | Multidrug resistance protein MexA | |
APE00075 | 2 | 19 | 3.046637 | Acetyltransferase | |
APE00076 | 2 | 18 | 3.440618 | HTH-type transcriptional regulator BetI | |
APE00077 | 3 | 18 | 4.567436 | Multidrug resistance protein 3 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00070 | TCRTETA | 68 | 1e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00073 | ACRIFLAVINRP | 1144 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00074 | RTXTOXIND | 43 | 2e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00075 | SACTRNSFRASE | 36 | 1e-05 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00076 | HTHTETR | 70 | 7e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00077 | TCRTETB | 139 | 2e-38 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
90 | APE00213 | APE00219 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00213 | -1 | 8 | 1.414805 | putative lipoprotein YiaD | |
APE00214 | -2 | 9 | 0.480275 | Biotin sulfoxide reductase | |
APE00215 | -2 | 12 | -0.273697 | Peptidyl-lysine N-acetyltransferase YiaC | |
APE00216 | -2 | 13 | -0.767585 | DNA-3-methyladenine glycosylase 1 | |
APE00217 | -2 | 12 | -1.372316 | hypothetical protein | |
APE00218 | -2 | 12 | -1.362336 | putative MFS-type transporter YhjX | |
APE00219 | -1 | 13 | -0.839553 | Kdo(2)-lipid A phosphoethanolamine |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00213 | OMPADOMAIN | 118 | 6e-34 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00215 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00218 | TCRTETA | 41 | 4e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00219 | PF06580 | 29 | 0.049 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
91 | APE00293 | APE00300 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00293 | -2 | 17 | 2.081055 | Undecaprenyl-phosphate | |
APE00294 | 0 | 14 | 2.202264 | Bifunctional polymyxin resistance protein ArnA | |
APE00295 | 3 | 12 | 2.939881 | putative | |
APE00296 | 3 | 13 | 2.195815 | Undecaprenyl | |
APE00297 | 3 | 16 | 2.282649 | putative | |
APE00298 | 2 | 12 | 4.110052 | putative | |
APE00299 | 1 | 11 | 3.926774 | Putative transport protein YhhT | |
APE00300 | 1 | 10 | 3.486436 | putative MFS-type transporter YhhS |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00293 | ACRIFLAVINRP | 31 | 0.011 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00294 | NUCEPIMERASE | 108 | 5e-28 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00297 | BCTERIALGSPC | 32 | 2e-04 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00300 | TCRTETA | 51 | 4e-09 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. |
92 | APE00325 | APE00332 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00325 | -2 | 13 | 0.171953 | sn-glycerol-3-phosphate-binding periplasmic | |
APE00326 | -2 | 12 | 0.598521 | sn-glycerol-3-phosphate transport system | |
APE00327 | -1 | 12 | 0.329870 | Lactose transport system permease protein LacG | |
APE00328 | -1 | 11 | 0.507378 | sn-glycerol-3-phosphate import ATP-binding | |
APE00329 | -2 | 12 | -0.534346 | Glycerophosphodiester phosphodiesterase, | |
APE00330 | -2 | 12 | -1.258417 | putative protein YhhA | |
APE00331 | 0 | 10 | -0.893866 | Glutathione hydrolase proenzyme | |
APE00332 | -1 | 11 | -1.629672 | L-amino acid N-acetyltransferase AaaT |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00325 | MALTOSEBP | 37 | 8e-05 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00328 | PF05272 | 29 | 0.037 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00329 | PF04619 | 28 | 0.018 | Dr-family adhesin | |
>PF04619#Dr-family adhesin | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00331 | NAFLGMOTY | 33 | 0.003 | Sodium-type flagellar protein MotY precursor signature. | |
>NAFLGMOTY#Sodium-type flagellar protein MotY precursor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00332 | SACTRNSFRASE | 38 | 6e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
93 | APE00380 | APE00385 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00380 | 1 | 16 | 1.436407 | hypothetical protein | |
APE00381 | 1 | 16 | -0.336184 | hypothetical protein | |
APE00382 | 0 | 17 | -1.294526 | Type IV pilus biogenesis and competence protein | |
APE00383 | 1 | 19 | -2.010830 | Shikimate kinase 1 | |
APE00384 | 1 | 16 | -1.913447 | 3-dehydroquinate synthase | |
APE00385 | 0 | 14 | -0.959747 | Cell division protein DamX |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00380 | PYOCINKILLER | 34 | 3e-04 | Pyocin S killer protein signature. | |
>PYOCINKILLER#Pyocin S killer protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00382 | TYPE3OMGPROT | 226 | 3e-70 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00383 | CARBMTKINASE | 31 | 0.002 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00385 | IGASERPTASE | 34 | 0.001 | IgA-specific serine endopeptidase (S6) signature. | |
>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature. |
94 | APE00420 | APE00425 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00420 | 4 | 47 | -6.699289 | Elongation factor G | |
APE00421 | 3 | 42 | -6.713641 | Elongation factor G | |
APE00422 | 3 | 44 | -6.504312 | Elongation factor Tu 1 | |
APE00423 | 1 | 38 | -6.969951 | Bacterioferritin-associated ferredoxin | |
APE00424 | 3 | 39 | -6.911974 | Bacterioferritin | |
APE00425 | 6 | 49 | -5.448980 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00420 | TCRTETOQM | 381 | e-128 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00421 | TCRTETOQM | 212 | 5e-67 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00422 | TCRTETOQM | 80 | 4e-18 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00424 | HELNAPAPROT | 37 | 9e-06 | Helicobacter neutrophil-activating protein A family ... | |
>HELNAPAPROT#Helicobacter neutrophil-activating protein A family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00425 | PREPILNPTASE | 127 | 1e-38 | Type IV prepilin cysteine protease (C20) family sig... | |
>PREPILNPTASE#Type IV prepilin cysteine protease (C20) family |
95 | APE00476 | APE00482 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00476 | -1 | 18 | -3.068788 | *hypothetical protein | |
APE00477 | 0 | 18 | -3.543877 | Multidrug efflux pump subunit AcrB | |
APE00478 | 0 | 20 | -3.994963 | Multidrug resistance protein MdtC | |
APE00479 | -1 | 19 | -3.697044 | Multidrug export protein AcrF | |
APE00480 | -2 | 15 | -2.200174 | Multidrug export protein AcrE | |
APE00481 | -2 | 17 | -2.384338 | HTH-type transcriptional regulator AcrR | |
APE00482 | -2 | 16 | -1.982059 | DNA-binding protein Fis |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00476 | PF06291 | 27 | 0.005 | Lambda prophage Bor protein | |
>PF06291#Lambda prophage Bor protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00477 | ACRIFLAVINRP | 292 | 5e-95 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00478 | ACRIFLAVINRP | 303 | 1e-97 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00479 | ACRIFLAVINRP | 682 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00480 | RTXTOXIND | 39 | 3e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00481 | HTHTETR | 118 | 2e-35 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00482 | DNABINDNGFIS | 157 | 3e-54 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. |
96 | APE00560 | APE00566 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00560 | -1 | 18 | -2.326599 | ATP-dependent zinc metalloprotease FtsH | |
APE00561 | -1 | 19 | -2.957695 | Dihydropteroate synthase | |
APE00562 | -1 | 12 | -3.114984 | Phosphoglucosamine mutase | |
APE00563 | 0 | 18 | -4.810467 | Protein-export membrane protein SecG | |
APE00565 | 0 | 18 | -4.952807 | *hypothetical protein | |
APE00566 | 2 | 22 | -4.065181 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00560 | HTHFIS | 34 | 0.002 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00563 | SECGEXPORT | 149 | 2e-50 | Protein-export SecG membrane protein signature. | |
>SECGEXPORT#Protein-export SecG membrane protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00565 | adhesinb | 27 | 0.033 | Adhesin B signature. | |
>adhesinb#Adhesin B signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00566 | MALTOSEBP | 30 | 0.006 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. |
97 | APE00800 | APE00811 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00800 | 2 | 22 | -0.105413 | Galactose-proton symporter | |
APE00801 | -1 | 19 | -0.276796 | Galactose-proton symporter | |
APE00802 | 0 | 19 | -0.635007 | S-adenosylmethionine synthase | |
APE00803 | -1 | 17 | -0.441824 | Biosynthetic arginine decarboxylase | |
APE00804 | -2 | 16 | -0.989594 | Biosynthetic arginine decarboxylase | |
APE00805 | -1 | 17 | -1.061585 | Agmatinase | |
APE00806 | -1 | 20 | -0.953488 | putative L-galactonate transporter | |
APE00807 | 0 | 20 | -0.380785 | Naphthalene 1,2-dioxygenase system, ferredoxin | |
APE00808 | 1 | 20 | 0.534273 | hypothetical protein | |
APE00809 | 1 | 20 | 1.569118 | hypothetical protein | |
APE00810 | 1 | 17 | 1.928939 | Sorbitol dehydrogenase | |
APE00811 | 1 | 18 | 1.220837 | Pyridoxal 4-dehydrogenase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00800 | TCRTETA | 38 | 3e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00801 | TCRTETB | 48 | 2e-09 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00804 | PF04183 | 28 | 0.015 | IucA / IucC family | |
>PF04183#IucA / IucC family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00806 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00810 | DHBDHDRGNASE | 46 | 3e-09 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00811 | DHBDHDRGNASE | 68 | 1e-16 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
98 | APE00890 | APE00898 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00890 | -1 | 14 | 4.033711 | Di-/tripeptide transporter | |
APE00891 | -1 | 15 | 4.735503 | hypothetical protein | |
APE00892 | 0 | 15 | 4.756621 | Cation efflux system protein CusC | |
APE00893 | -1 | 14 | 3.487911 | Multidrug resistance protein MdtO | |
APE00894 | -2 | 14 | 1.019428 | Multidrug resistance protein MdtN | |
APE00895 | -1 | 15 | 0.071892 | Multidrug resistance protein MdtN | |
APE00896 | -1 | 14 | 0.612102 | hypothetical protein | |
APE00897 | 0 | 14 | 1.179727 | hypothetical protein | |
APE00898 | 2 | 16 | 2.016137 | putative protein YjdJ |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00890 | TCRTETB | 31 | 0.010 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00893 | TYPE3IMSPROT | 29 | 0.050 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00894 | RTXTOXIND | 61 | 6e-13 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00895 | RTXTOXIND | 34 | 5e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00898 | SACTRNSFRASE | 28 | 0.002 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
99 | APE00930 | APE00938 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE00930 | 1 | 13 | 1.181043 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | |
APE00931 | 0 | 12 | 0.510967 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | |
APE00932 | -1 | 11 | -0.171914 | Arabinose-proton symporter | |
APE00933 | -2 | 10 | -0.601053 | HTH-type transcriptional repressor CytR | |
APE00934 | -2 | 12 | -1.259190 | Sucrose permease | |
APE00935 | -1 | 12 | -1.227268 | Sucrose-6-phosphate hydrolase | |
APE00936 | 1 | 14 | -2.977490 | hypothetical protein | |
APE00937 | 2 | 18 | -2.972108 | Putative ABC transporter substrate-binding | |
APE00938 | 0 | 14 | -2.031845 | Diacetylchitobiose uptake system ATP-binding |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00930 | DHBDHDRGNASE | 63 | 1e-14 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00931 | DHBDHDRGNASE | 51 | 5e-11 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00932 | TCRTETB | 55 | 4e-10 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00934 | TCRTETA | 29 | 0.036 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00937 | MALTOSEBP | 30 | 0.024 | Maltose binding protein signature. | |
>MALTOSEBP#Maltose binding protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE00938 | BACINVASINB | 36 | 4e-04 | Salmonella/Shigella invasin protein B signature. | |
>BACINVASINB#Salmonella/Shigella invasin protein B signature. |
100 | APE01725 | APE01740 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01725 | -2 | 12 | 1.533697 | Oligopeptide transport ATP-binding protein OppD | |
APE01726 | -1 | 15 | 2.381427 | Oligopeptide transport ATP-binding protein OppF | |
APE01727 | 1 | 21 | 3.566247 | putative lipid kinase YegS | |
APE01729 | 3 | 26 | 4.400188 | 23S rRNA 5-hydroxycytidine synthase | |
APE01730 | 3 | 25 | 5.214274 | Transcriptional regulatory protein BaeR | |
APE01731 | 3 | 26 | 5.103974 | Signal transduction histidine-protein kinase | |
APE01732 | 4 | 26 | 4.705223 | Putative multidrug resistance protein MdtD | |
APE01733 | 2 | 23 | 3.789112 | Multidrug resistance protein MdtC | |
APE01734 | 1 | 20 | 2.733018 | Multidrug resistance protein MdtB | |
APE01735 | -1 | 13 | 0.331002 | Multidrug resistance protein MdtA | |
APE01736 | 1 | 14 | -0.428036 | C4-dicarboxylate transport protein | |
APE01737 | 1 | 13 | 0.482365 | Proton/sodium-glutamate symport protein | |
APE01738 | 1 | 14 | 1.919569 | hypothetical protein | |
APE01739 | 2 | 14 | 4.600611 | hypothetical protein | |
APE01740 | 2 | 14 | 3.899850 | Virulence transcriptional regulatory protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01725 | HTHFIS | 29 | 0.027 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01726 | PF05272 | 29 | 0.018 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01730 | HTHFIS | 76 | 4e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01731 | BCTERIALGSPF | 35 | 4e-04 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01732 | TCRTETB | 123 | 5e-33 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01733 | ACRIFLAVINRP | 890 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01734 | ACRIFLAVINRP | 899 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01735 | RTXTOXIND | 44 | 6e-07 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01740 | HTHFIS | 66 | 1e-14 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
101 | APE01774 | APE01779 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE01774 | 1 | 57 | -17.574738 | UDP-glucose 4-epimerase | |
APE01775 | 2 | 57 | -18.044072 | UDP-N-acetylglucosamine 4-epimerase | |
APE01776 | 1 | 59 | -17.983072 | UDP-N-acetylglucosamine 4-epimerase | |
APE01777 | 1 | 66 | -19.824710 | hypothetical protein | |
APE01778 | 2 | 68 | -20.012181 | hypothetical protein | |
APE01779 | 1 | 61 | -17.678971 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01774 | NUCEPIMERASE | 279 | 6e-98 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01775 | NUCEPIMERASE | 299 | e-105 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01776 | NUCEPIMERASE | 585 | 0.0 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE01779 | GPOSANCHOR | 29 | 0.047 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. |
102 | APE02082 | APE02085 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02082 | -1 | 15 | 0.348336 | Invasin | |
APE02083 | 0 | 17 | 0.196942 | Nitrate/nitrite response regulator protein NarL | |
APE02084 | 0 | 18 | 0.247807 | Nitrate/nitrite sensor protein NarX | |
APE02085 | -1 | 17 | 0.055193 | Nitrate/nitrite transporter NarK |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02082 | INTIMIN | 229 | 7e-69 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02083 | HTHFIS | 74 | 8e-18 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02084 | PF06580 | 48 | 5e-08 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02085 | TCRTETB | 31 | 0.011 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
103 | APE02159 | APE02169 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02159 | 0 | 16 | 3.430647 | Multidrug resistance protein MdtH | |
APE02160 | 0 | 15 | 3.453985 | Fe(3+) dicitrate transport ATP-binding protein | |
APE02161 | 0 | 15 | 3.272063 | Hemin transport system permease protein HmuU | |
APE02162 | 0 | 17 | 4.796071 | hypothetical protein | |
APE02163 | 1 | 18 | 4.797585 | hypothetical protein | |
APE02164 | 0 | 16 | 5.432889 | HTH-type transcriptional regulator HdfR | |
APE02165 | 1 | 16 | 5.315535 | hypothetical protein | |
APE02166 | 2 | 17 | 4.988551 | hypothetical protein | |
APE02167 | 2 | 18 | 5.257426 | Multidrug resistance protein MdtA | |
APE02168 | 3 | 18 | 3.276377 | hypothetical protein | |
APE02169 | 2 | 16 | 2.159952 | Nickel and cobalt resistance protein CnrA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02159 | TCRTETA | 66 | 5e-14 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02160 | PF05272 | 28 | 0.030 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02165 | NUCEPIMERASE | 37 | 6e-05 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02166 | HTHTETR | 70 | 4e-17 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02167 | RTXTOXIND | 40 | 1e-05 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02168 | ACRIFLAVINRP | 75 | 2e-18 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02169 | ACRIFLAVINRP | 354 | e-110 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
104 | APE02283 | APE02290 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02283 | 1 | 17 | 1.476993 | Isoxanthopterin deaminase | |
APE02284 | 0 | 20 | -1.483409 | Validamycin A dioxygenase | |
APE02285 | 0 | 20 | -2.541984 | hypothetical protein | |
APE02286 | -1 | 16 | 1.269999 | HTH-type transcriptional regulator DmlR | |
APE02287 | 0 | 16 | 3.336354 | Drug efflux pump JefA | |
APE02288 | 2 | 15 | 3.607741 | hypothetical protein | |
APE02289 | 2 | 16 | 3.148896 | hypothetical protein | |
APE02290 | -1 | 16 | 2.612196 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02283 | FERRIBNDNGPP | 32 | 0.003 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02287 | TCRTETB | 58 | 9e-13 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02288 | TCRTETB | 29 | 0.007 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02290 | cloacin | 31 | 0.002 | Cloacin signature. | |
>cloacin#Cloacin signature. |
105 | APE02412 | APE02419 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02412 | 1 | 15 | 1.628357 | L-amino acid N-acyltransferase MnaT | |
APE02413 | 2 | 13 | 1.797835 | hypothetical protein | |
APE02414 | 1 | 16 | 1.648948 | NADPH-dependent curcumin reductase | |
APE02415 | 1 | 15 | 1.563049 | Pyrimidine-specific ribonucleoside hydrolase | |
APE02416 | 1 | 17 | 1.221139 | hypothetical protein | |
APE02417 | -1 | 16 | 1.194767 | hypothetical protein | |
APE02418 | -1 | 16 | 0.982241 | hypothetical protein | |
APE02419 | -1 | 14 | 0.730454 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02412 | SACTRNSFRASE | 34 | 1e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02416 | PF05272 | 26 | 0.035 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02417 | UREASE | 35 | 5e-05 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02419 | UREASE | 33 | 0.001 | Urea amidohydrolase (urease) protein signature. | |
>UREASE#Urea amidohydrolase (urease) protein signature. |
106 | APE02568 | APE02573 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02568 | 1 | 14 | -0.654077 | Colistin resistance protein EmrB | |
APE02569 | 1 | 14 | -0.477944 | Colistin resistance protein EmrB | |
APE02570 | 1 | 12 | 1.252989 | Colistin resistance protein EmrA | |
APE02571 | 0 | 15 | 0.609651 | hypothetical protein | |
APE02572 | 1 | 14 | 3.366444 | Aspartate-semialdehyde dehydrogenase | |
APE02573 | 2 | 18 | 6.011515 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02568 | TCRTETB | 27 | 0.044 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02569 | TCRTETB | 66 | 3e-14 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02570 | RTXTOXIND | 107 | 4e-28 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02573 | SACTRNSFRASE | 33 | 2e-04 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. |
107 | APE02627 | APE02632 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02627 | -2 | 20 | -3.283631 | Potassium binding protein Kbp | |
APE02628 | -1 | 22 | -4.328390 | Phosphoglycerate transporter protein | |
APE02629 | -2 | 30 | -4.617274 | Phosphoglycerate transport regulatory protein | |
APE02630 | -1 | 30 | -4.927991 | Phosphoglycerate transport system sensor protein | |
APE02631 | -1 | 32 | -4.307822 | Phosphoglycerate transport system sensor protein | |
APE02632 | 0 | 31 | -4.186218 | C4-dicarboxylate transport transcriptional |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02627 | INTIMIN | 33 | 4e-04 | Intimin signature. | |
>INTIMIN#Intimin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02628 | TCRTETA | 31 | 0.012 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02629 | FLGMOTORFLIM | 31 | 0.010 | Flagellar motor switch protein FliM signature. | |
>FLGMOTORFLIM#Flagellar motor switch protein FliM signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02631 | PF06580 | 28 | 0.011 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02632 | HTHFIS | 227 | 8e-72 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. |
108 | APE02652 | APE02661 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02652 | 2 | 15 | 1.390145 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02653 | 1 | 17 | 1.376421 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02654 | 1 | 16 | 0.976574 | Acetyl-CoA acetyltransferase | |
APE02655 | 0 | 13 | 1.315064 | Putative tartrate transporter | |
APE02656 | 0 | 17 | -0.055762 | 6-deoxy-6-sulfogluconolactonase | |
APE02657 | 1 | 18 | -0.483911 | hypothetical protein | |
APE02658 | 2 | 19 | -0.005492 | hypothetical protein | |
APE02659 | 2 | 17 | 1.435494 | hypothetical protein | |
APE02660 | 2 | 18 | 2.413480 | Glycerate 2-kinase | |
APE02661 | 1 | 18 | 0.928364 | Carbohydrate diacid regulator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02652 | DHBDHDRGNASE | 94 | 3e-26 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02653 | DHBDHDRGNASE | 32 | 6e-05 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02655 | TCRTETA | 36 | 2e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02657 | TCRTETB | 33 | 6e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02659 | TCRTETA | 28 | 0.016 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02661 | DNABINDNGFIS | 29 | 0.012 | DNA-binding protein FIS signature. | |
>DNABINDNGFIS#DNA-binding protein FIS signature. |
109 | APE02745 | APE02749 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02745 | 2 | 17 | 3.752515 | hypothetical protein | |
APE02746 | 3 | 17 | 4.930371 | hypothetical protein | |
APE02747 | 1 | 16 | 3.771135 | hypothetical protein | |
APE02748 | 0 | 15 | 3.554770 | High-affinity branched-chain amino acid | |
APE02749 | 0 | 13 | 3.439220 | High-affinity branched-chain amino acid |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02745 | TCRTETA | 28 | 0.010 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02746 | TCRTETB | 32 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02747 | TYPE3OMBPROT | 28 | 0.021 | Type III secretion system outer membrane B protein ... | |
>TYPE3OMBPROT#Type III secretion system outer membrane B protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02749 | PF05211 | 28 | 0.039 | Neuraminyllactose-binding hemagglutinin | |
>PF05211#Neuraminyllactose-binding hemagglutinin |
110 | APE02901 | APE02908 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02901 | -1 | 12 | 1.202424 | Colistin resistance protein EmrA | |
APE02902 | -2 | 10 | 1.051883 | Outer membrane protein OprM | |
APE02903 | -1 | 11 | 0.360557 | Catechol O-methyltransferase | |
APE02904 | -1 | 11 | 0.150450 | hypothetical protein | |
APE02905 | 0 | 13 | 0.970998 | FMN-dependent NADH-azoreductase | |
APE02906 | 0 | 15 | 1.049494 | hypothetical protein | |
APE02907 | -1 | 13 | 1.974829 | Protein YrdA | |
APE02908 | 0 | 13 | 2.480898 | Transcriptional repressor PaaX |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02901 | RTXTOXIND | 101 | 5e-26 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02902 | RTXTOXIND | 33 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02905 | LIPPROTEIN48 | 28 | 0.019 | Mycoplasma P48 major surface lipoprotein signature. | |
>LIPPROTEIN48#Mycoplasma P48 major surface lipoprotein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02908 | PRTACTNFAMLY | 28 | 0.048 | Pertactin virulence factor family signature. | |
>PRTACTNFAMLY#Pertactin virulence factor family signature. |
111 | APE02953 | APE02962 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE02953 | 1 | 16 | 4.669686 | hypothetical protein | |
APE02954 | 0 | 15 | 4.425264 | hypothetical protein | |
APE02955 | -1 | 16 | 4.785266 | Nodulation protein D 2 | |
APE02956 | 0 | 18 | 4.944005 | HTH-type transcriptional regulator PgrR | |
APE02957 | 1 | 18 | 4.831055 | hypothetical protein | |
APE02958 | 0 | 19 | 5.279931 | HTH-type transcriptional activator RhaS | |
APE02959 | -1 | 19 | 3.479491 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02960 | -1 | 20 | 3.399340 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE02961 | -1 | 19 | 3.045956 | hypothetical protein | |
APE02962 | -2 | 15 | 1.899942 | Cyclic-di-GMP-binding biofilm dispersal mediator |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02953 | NUCEPIMERASE | 40 | 6e-06 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02955 | PF05043 | 34 | 9e-04 | Transcriptional activator | |
>PF05043#Transcriptional activator | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02959 | DHBDHDRGNASE | 55 | 3e-12 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02960 | DHBDHDRGNASE | 38 | 1e-06 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE02962 | DHBDHDRGNASE | 83 | 3e-21 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
112 | APE03021 | APE03028 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03021 | 4 | 18 | 4.541018 | Anaerobic nitric oxide reductase transcription | |
APE03022 | 3 | 18 | 4.808106 | Psp operon transcriptional activator | |
APE03023 | 3 | 17 | 5.245623 | Quinolone resistance protein NorB | |
APE03024 | 0 | 15 | 4.837737 | Hippurate hydrolase | |
APE03025 | 0 | 15 | 4.471839 | HTH-type transcriptional activator RhaR | |
APE03026 | 1 | 15 | 4.340787 | hypothetical protein | |
APE03027 | -1 | 15 | 3.588998 | hypothetical protein | |
APE03028 | 0 | 15 | 2.931472 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03021 | HTHFIS | 250 | 3e-83 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03022 | HTHFIS | 48 | 5e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03023 | TCRTETB | 89 | 3e-21 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03028 | NUCEPIMERASE | 45 | 1e-07 | Nucleotide sugar epimerase signature. | |
>NUCEPIMERASE#Nucleotide sugar epimerase signature. |
113 | APE03250 | APE03256 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03250 | -1 | 11 | -0.981879 | Virulence transcriptional regulatory protein | |
APE03251 | -1 | 11 | -1.436420 | Sensor protein PhoQ | |
APE03252 | -1 | 11 | -1.864029 | Virulence sensor histidine kinase PhoQ | |
APE03253 | -1 | 12 | -2.102260 | 50S ribosomal protein L16 3-hydroxylase | |
APE03254 | -2 | 11 | -0.177521 | Peptidase T | |
APE03255 | -2 | 14 | 1.320068 | Spermidine/putrescine import ATP-binding protein | |
APE03256 | -2 | 14 | 2.110804 | Spermidine/putrescine transport system permease |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03250 | HTHFIS | 90 | 4e-23 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03252 | PF06580 | 28 | 0.009 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03255 | PF05272 | 30 | 0.020 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03256 | PF06580 | 29 | 0.020 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase |
114 | APE03528 | APE03537 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03528 | 2 | 16 | 2.767579 | Aspartate/alanine antiporter | |
APE03530 | 2 | 13 | 2.236601 | HTH-type transcriptional regulator RcdA | |
APE03531 | 0 | 13 | 1.429634 | Inner membrane protein YbjJ | |
APE03532 | 0 | 13 | 0.040192 | 5-amino-6-(5-phospho-D-ribitylamino)uracil | |
APE03533 | 0 | 13 | 0.631639 | Multidrug transporter MdfA | |
APE03534 | -1 | 12 | 1.111011 | Putative undecaprenyl-diphosphatase YbjG | |
APE03535 | -1 | 15 | -0.091474 | Deoxyribose operon repressor | |
APE03536 | 1 | 15 | -1.132852 | D-alanyl-D-alanine carboxypeptidase DacC | |
APE03537 | -1 | 12 | -0.673656 | D-alanyl-D-alanine carboxypeptidase DacC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03528 | TCRTETA | 32 | 0.003 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03530 | HTHTETR | 50 | 4e-10 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03531 | TCRTETB | 34 | 8e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03533 | TCRTETA | 45 | 3e-07 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03537 | BLACTAMASEA | 34 | 2e-04 | Beta-lactamase class A signature. | |
>BLACTAMASEA#Beta-lactamase class A signature. |
115 | APE03591 | APE03601 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03591 | 4 | 17 | -3.211667 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | |
APE03592 | 2 | 18 | -2.771670 | putative glucarate transporter | |
APE03593 | -1 | 15 | 0.835934 | HTH-type transcriptional regulator PerR | |
APE03594 | -2 | 14 | 1.677347 | HTH-type transcriptional dual regulator CecR | |
APE03595 | -2 | 15 | 1.498475 | hypothetical protein | |
APE03596 | -2 | 16 | 1.167620 | hypothetical protein | |
APE03597 | -1 | 15 | 0.848952 | hypothetical protein | |
APE03598 | -2 | 15 | 0.415938 | putative multidrug ABC transporter ATP-binding | |
APE03599 | -1 | 14 | 0.061534 | putative multidrug ABC transporter permease | |
APE03600 | -1 | 14 | -0.130404 | putative multidrug ABC transporter permease | |
APE03601 | 0 | 14 | -0.462867 | putative multidrug ABC transporter permease |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03591 | DHBDHDRGNASE | 118 | 2e-34 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03592 | TCRTETA | 43 | 1e-06 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03594 | HTHTETR | 62 | 1e-14 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03596 | RTXTOXIND | 38 | 3e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03597 | RTXTOXIND | 66 | 6e-15 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03598 | PF05272 | 31 | 0.019 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03601 | ABC2TRNSPORT | 29 | 0.005 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein |
116 | APE03825 | APE03832 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03825 | -2 | 17 | 3.635179 | Peptide transporter CstA | |
APE03826 | 0 | 17 | 4.340105 | Proofreading thioesterase EntH | |
APE03827 | 0 | 17 | 4.782029 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |
APE03828 | 0 | 17 | 5.339238 | Enterobactin synthase component B | |
APE03829 | 0 | 16 | 6.190782 | Enterobactin synthase component E | |
APE03830 | 1 | 16 | 6.954832 | Isochorismate synthase EntC | |
APE03831 | 3 | 19 | 7.977936 | Ferrienterobactin-binding periplasmic protein | |
APE03832 | 4 | 19 | 8.257311 | Enterobactin exporter EntS |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03825 | ACRIFLAVINRP | 31 | 0.013 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03827 | DHBDHDRGNASE | 340 | e-121 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03828 | ISCHRISMTASE | 427 | e-154 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03831 | FERRIBNDNGPP | 53 | 6e-10 | Ferrichrome-binding periplasmic protein signature. | |
>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03832 | TCRTETB | 37 | 2e-04 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
117 | APE03902 | APE03906 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE03902 | 1 | 14 | 1.568365 | Transcriptional regulatory protein DagR | |
APE03903 | 2 | 15 | 2.976818 | hypothetical protein | |
APE03904 | 1 | 14 | 2.692459 | hypothetical protein | |
APE03905 | -1 | 12 | 1.701320 | hypothetical protein | |
APE03906 | -1 | 9 | -0.176811 | Drug efflux pump JefA |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03902 | HTHFIS | 144 | 6e-41 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03904 | TYPE3OMGPROT | 28 | 0.031 | Type III secretion system outer membrane G protein ... | |
>TYPE3OMGPROT#Type III secretion system outer membrane G protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03905 | CARBMTKINASE | 30 | 0.012 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE03906 | TCRTETB | 103 | 7e-26 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. |
118 | APE04029 | APE04032 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04029 | 0 | 13 | -3.037890 | Mechanosensitive channel MscK | |
APE04030 | 1 | 17 | -4.096439 | HTH-type transcriptional regulator AcrR | |
APE04031 | 2 | 16 | -3.843038 | Multidrug efflux pump subunit AcrA | |
APE04032 | 1 | 14 | -2.109623 | Multidrug efflux pump subunit AcrB |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04029 | GPOSANCHOR | 47 | 4e-07 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04030 | HTHTETR | 185 | 2e-61 | TetR bacterial regulatory protein HTH signature. | |
>HTHTETR#TetR bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04031 | RTXTOXIND | 43 | 1e-06 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04032 | ACRIFLAVINRP | 1365 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. |
119 | APE04124 | APE04128 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04124 | 2 | 21 | -1.105170 | Nucleoside-specific channel-forming protein Tsx | |
APE04125 | 2 | 18 | -0.988462 | hypothetical protein | |
APE04126 | 2 | 18 | -1.432949 | hypothetical protein | |
APE04127 | 2 | 18 | -1.355766 | Protein translocase subunit SecF | |
APE04128 | 2 | 18 | -1.683543 | Protein translocase subunit SecD |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04124 | CHANNELTSX | 537 | 0.0 | Nucleoside-specific channel-forming protein Tsx signa... | |
>CHANNELTSX#Nucleoside-specific channel-forming protein Tsx | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04125 | ARGREPRESSOR | 32 | 9e-04 | Bacterial arginine repressor signature. | |
>ARGREPRESSOR#Bacterial arginine repressor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04127 | SECFTRNLCASE | 342 | e-120 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04128 | SECFTRNLCASE | 69 | 5e-15 | Bacterial translocase SecF protein signature. | |
>SECFTRNLCASE#Bacterial translocase SecF protein signature. |
120 | APE04142 | APE04156 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04142 | -1 | 12 | 0.709728 | hypothetical protein | |
APE04143 | -2 | 11 | 0.828896 | hypothetical protein | |
APE04144 | -2 | 11 | 1.024237 | HTH-type transcriptional regulator YhaJ | |
APE04145 | -3 | 14 | 1.413372 | Maltodextrin glucosidase | |
APE04146 | 1 | 12 | 2.054997 | Proline-specific permease ProY | |
APE04147 | 1 | 12 | 2.597509 | Branched-chain amino acid transport system 2 | |
APE04148 | 3 | 12 | 2.334135 | Phosphate regulon sensor protein PhoR | |
APE04149 | 4 | 11 | 2.482200 | Phosphate regulon transcriptional regulatory | |
APE04150 | 3 | 11 | 2.591263 | Nuclease SbcCD subunit D | |
APE04151 | 3 | 10 | 2.393134 | Nuclease SbcCD subunit C | |
APE04152 | -3 | 12 | 0.856817 | Fructokinase | |
APE04153 | -1 | 14 | 0.665319 | Recombination-associated protein RdgC | |
APE04154 | -2 | 14 | 1.153294 | Pyrimidine/purine nucleoside phosphorylase | |
APE04155 | -2 | 14 | 0.842640 | hypothetical protein | |
APE04156 | -1 | 12 | 1.805183 | Shikimate kinase 2 |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04142 | ISCHRISMTASE | 36 | 6e-05 | Isochorismatase signature. | |
>ISCHRISMTASE#Isochorismatase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04146 | TCRTETA | 29 | 0.028 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04148 | PF06580 | 31 | 0.006 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04149 | HTHFIS | 96 | 5e-25 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04151 | DPTHRIATOXIN | 37 | 5e-04 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04152 | ACETATEKNASE | 34 | 8e-04 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04156 | PF05272 | 32 | 0.002 | Virulence-associated E family protein | |
>PF05272#Virulence-associated E family protein |
121 | APE04364 | APE04375 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04364 | -1 | 10 | 0.781183 | Penicillin-binding protein 1B | |
APE04365 | -1 | 15 | 1.502652 | hypothetical protein | |
APE04366 | -1 | 15 | 2.181554 | Pullulanase | |
APE04367 | -1 | 17 | 2.350311 | Pullulanase | |
APE04368 | -2 | 17 | 3.081635 | Type II secretion system protein C | |
APE04369 | 0 | 20 | 4.458462 | Secretin PulD | |
APE04370 | 4 | 23 | 6.705889 | Type II secretion system protein E | |
APE04371 | 3 | 24 | 6.544246 | Type II secretion system protein F | |
APE04372 | 3 | 23 | 6.725994 | Type II secretion system protein G | |
APE04373 | 4 | 23 | 7.107600 | Putative type II secretion system protein H | |
APE04374 | 5 | 22 | 7.185391 | hypothetical protein | |
APE04375 | 5 | 22 | 7.666960 | Type II secretion system protein J |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04364 | 56KDTSANTIGN | 35 | 0.002 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04368 | BCTERIALGSPC | 214 | 4e-71 | Bacterial general secretion pathway protein C signa... | |
>BCTERIALGSPC#Bacterial general secretion pathway protein C | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04369 | BCTERIALGSPD | 839 | 0.0 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04371 | BCTERIALGSPF | 512 | 0.0 | Bacterial general secretion pathway protein F signa... | |
>BCTERIALGSPF#Bacterial general secretion pathway protein F | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04372 | BCTERIALGSPG | 243 | 2e-86 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04373 | BCTERIALGSPH | 177 | 8e-60 | Bacterial general secretion pathway protein H signa... | |
>BCTERIALGSPH#Bacterial general secretion pathway protein H | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04374 | BCTERIALGSPG | 34 | 6e-05 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04375 | BCTERIALGSPG | 33 | 3e-04 | Bacterial general secretion pathway protein G signa... | |
>BCTERIALGSPG#Bacterial general secretion pathway protein G |
122 | APE04468 | APE04482 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04468 | 0 | 17 | -6.229735 | Inner membrane transport protein YdiM | |
APE04469 | 0 | 13 | -4.117309 | Inner membrane transport protein YdiM | |
APE04470 | 0 | 16 | -4.064415 | 3-dehydroquinate dehydratase | |
APE04471 | 1 | 14 | -2.395940 | HTH-type transcriptional regulator GltC | |
APE04472 | 1 | 11 | -0.642845 | D-galactonate transporter | |
APE04473 | 2 | 11 | 1.176029 | putative glucarate transporter | |
APE04474 | 4 | 12 | 2.594892 | Sugar efflux transporter A | |
APE04476 | 4 | 12 | 2.749027 | hypothetical protein | |
APE04477 | 3 | 13 | 2.836457 | HTH-type transcriptional regulator SgrR | |
APE04479 | 2 | 14 | 3.509800 | Thiamine-binding periplasmic protein | |
APE04480 | 2 | 14 | 3.528305 | hypothetical protein | |
APE04481 | 0 | 14 | 2.766535 | Thiamine import ATP-binding protein ThiQ | |
APE04482 | -3 | 14 | 2.415555 | Inner membrane protein YabI |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04468 | TCRTETA | 36 | 1e-04 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04472 | TCRTETA | 31 | 0.001 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04473 | TCRTETA | 38 | 2e-05 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04474 | TCRTETA | 33 | 0.002 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04477 | NEISSPPORIN | 37 | 2e-04 | Neisseria sp. porin signature. | |
>NEISSPPORIN#Neisseria sp. porin signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04482 | PHPHTRNFRASE | 28 | 0.048 | Phosphoenolpyruvate-protein phosphotransferase sign... | |
>PHPHTRNFRASE#Phosphoenolpyruvate-protein phosphotransferase |
123 | APE04553 | APE04562 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04553 | -2 | 11 | -0.458870 | Bifunctional aspartokinase/homoserine | |
APE04555 | -1 | 17 | -0.462867 | tRNA (cytidine(34)-2'-O)-methyltransferase | |
APE04556 | -1 | 16 | -0.390579 | Aerobic respiration control protein ArcA | |
APE04557 | 0 | 18 | 0.109690 | Inner membrane protein CreD | |
APE04558 | 1 | 16 | 1.284849 | Sensor protein CreC | |
APE04559 | 0 | 13 | 1.023682 | Sensor protein CreC | |
APE04560 | 1 | 13 | 0.560118 | Transcriptional regulatory protein CreB | |
APE04561 | 0 | 12 | 0.834021 | hypothetical protein | |
APE04562 | 0 | 12 | 0.767019 | Right origin-binding protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04553 | CARBMTKINASE | 31 | 0.025 | Bacterial carbamate kinase signature. | |
>CARBMTKINASE#Bacterial carbamate kinase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04556 | HTHFIS | 83 | 2e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04558 | PF06580 | 38 | 3e-05 | Sensor histidine kinase | |
>PF06580#Sensor histidine kinase | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04560 | HTHFIS | 99 | 4e-26 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04562 | DPTHRIATOXIN | 29 | 0.020 | Diphtheria toxin signature. | |
>DPTHRIATOXIN#Diphtheria toxin signature. |
124 | APE04656 | APE04665 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04656 | -1 | 15 | 0.836249 | hypothetical protein | |
APE04657 | -2 | 17 | 1.568952 | hypothetical protein | |
APE04658 | -1 | 18 | 2.258356 | Multidrug resistance protein MdtM | |
APE04659 | -1 | 18 | 1.402857 | Multidrug resistance protein MdtM | |
APE04660 | -1 | 17 | 1.197536 | hypothetical protein | |
APE04661 | -1 | 16 | 1.290683 | (R)-phenyllactyl-CoA dehydratase beta subunit | |
APE04662 | 0 | 17 | 1.199557 | (R)-phenyllactate dehydratase activator | |
APE04663 | 1 | 17 | 1.028006 | hypothetical protein | |
APE04664 | -1 | 11 | -0.860442 | hypothetical protein | |
APE04665 | -2 | 12 | -0.814343 | Inner membrane protein YibH |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04656 | OMPADOMAIN | 26 | 0.019 | OMPA domain signature. | |
>OMPADOMAIN#OMPA domain signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04658 | TCRTETB | 36 | 2e-05 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04659 | TCRTETB | 32 | 0.002 | Tetracycline resistance protein TetB signature. | |
>TCRTETB#Tetracycline resistance protein TetB signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04662 | ACETATEKNASE | 28 | 0.033 | Acetate kinase family signature. | |
>ACETATEKNASE#Acetate kinase family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04665 | RTXTOXIND | 66 | 4e-14 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D |
125 | APE04685 | APE04702 | N ![]() | Y ![]() | Y | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04685 | -1 | 11 | -2.548726 | Inner membrane transport permease YhhJ | |
APE04686 | -1 | 12 | -2.154943 | hypothetical protein | |
APE04692 | -2 | 10 | -1.196252 | *50S ribosomal protein L16 3-hydroxylase | |
APE04693 | -2 | 14 | -1.484875 | hypothetical protein | |
APE04694 | -1 | 13 | 0.518129 | hypothetical protein | |
APE04695 | -1 | 16 | 1.625020 | Sensor histidine kinase CusS | |
APE04696 | -2 | 17 | 1.975616 | Transcriptional regulatory protein CusR | |
APE04697 | -2 | 17 | 2.285182 | Cation efflux system protein CusC | |
APE04698 | 0 | 19 | 2.667615 | Cation efflux system protein CusF | |
APE04699 | 0 | 20 | 3.154692 | Cation efflux system protein CusB | |
APE04700 | 0 | 22 | 3.444061 | Cation efflux system protein CusA | |
APE04701 | 0 | 23 | 5.559436 | hypothetical protein | |
APE04702 | 2 | 25 | 6.431598 | Outer membrane lipoprotein Blc |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04685 | ABC2TRNSPORT | 48 | 1e-08 | ABC-2 type transport system membrane protein signat... | |
>ABC2TRNSPORT#ABC-2 type transport system membrane protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04695 | BORPETOXINA | 29 | 0.028 | Bordetella pertussis toxin A subunit signature. | |
>BORPETOXINA#Bordetella pertussis toxin A subunit signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04696 | HTHFIS | 83 | 1e-20 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04697 | GPOSANCHOR | 32 | 0.005 | Gram-positive coccus surface protein anchor signature. | |
>GPOSANCHOR#Gram-positive coccus surface protein anchor signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04700 | ACRIFLAVINRP | 683 | 0.0 | Acriflavin resistance protein family signature. | |
>ACRIFLAVINRP#Acriflavin resistance protein family signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04702 | BCTLIPOCALIN | 233 | 1e-81 | Bacterial lipocalin signature. | |
>BCTLIPOCALIN#Bacterial lipocalin signature. |
126 | APE04939 | APE04944 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE04939 | 2 | 18 | 4.773039 | hypothetical protein | |
APE04940 | 1 | 19 | 4.880337 | Sensor histidine kinase RcsC | |
APE04941 | 0 | 19 | 3.821031 | Ribose import ATP-binding protein RbsA | |
APE04942 | -2 | 14 | 0.473394 | Xylose import ATP-binding protein XylG | |
APE04943 | -1 | 16 | -1.309859 | Ribose import permease protein RbsC | |
APE04944 | -1 | 16 | -1.243400 | hypothetical protein |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04939 | RTXTOXIND | 30 | 0.002 | Gram-negative bacterial RTX secretion protein D signat... | |
>RTXTOXIND#Gram-negative bacterial RTX secretion protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04940 | HTHFIS | 56 | 4e-10 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04943 | PF00577 | 29 | 0.043 | Outer membrane usher protein FimD | |
>PF00577#Outer membrane usher protein FimD | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE04944 | SUBTILISIN | 29 | 0.010 | Subtilisin serine protease family (S8) signature. | |
>SUBTILISIN#Subtilisin serine protease family (S8) signature. |
127 | APE05026 | APE05035 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE05026 | -1 | 13 | -0.739575 | hypothetical protein | |
APE05027 | 1 | 15 | -1.018012 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose | |
APE05028 | -1 | 15 | -1.465434 | Glucose-6-phosphate isomerase | |
APE05030 | -1 | 14 | -1.828753 | Lysine-sensitive aspartokinase 3 | |
APE05031 | -1 | 14 | -2.676523 | Pantothenate precursors transporter PanS | |
APE05032 | 0 | 16 | -4.849251 | hypothetical protein | |
APE05033 | 0 | 16 | -3.763045 | Dual-specificity RNA pseudouridine synthase | |
APE05034 | 1 | 17 | -2.868951 | Sorbitol operon regulator | |
APE05035 | 1 | 15 | -1.623174 | Dihydroanticapsin 7-dehydrogenase |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05026 | SACTRNSFRASE | 27 | 0.036 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05028 | BCTERIALGSPD | 32 | 0.007 | Bacterial general secretion pathway protein D signa... | |
>BCTERIALGSPD#Bacterial general secretion pathway protein D | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05032 | 56KDTSANTIGN | 25 | 0.038 | Rickettsia 56kDa type-specific antigen protein sign... | |
>56KDTSANTIGN#Rickettsia 56kDa type-specific antigen protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05034 | HTHFIS | 28 | 0.044 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05035 | DHBDHDRGNASE | 115 | 4e-33 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig... | |
>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase |
128 | APE05299 | APE05307 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE05299 | 2 | 21 | -2.380563 | GTP-binding protein TypA/BipA | |
APE05300 | -2 | 15 | -2.494419 | GTP-binding protein TypA/BipA | |
APE05302 | -2 | 14 | -2.084720 | Glutamine synthetase | |
APE05303 | -1 | 15 | -1.871404 | Sensory histidine kinase/phosphatase NtrB | |
APE05304 | 0 | 14 | -1.969673 | DNA-binding transcriptional regulator NtrC | |
APE05305 | 1 | 14 | -2.890761 | Oxygen-independent coproporphyrinogen III | |
APE05306 | 1 | 15 | -3.080708 | Oxygen-independent coproporphyrinogen III | |
APE05307 | 1 | 15 | -3.371271 | Der GTPase-activating protein YihI |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05299 | TCRTETOQM | 66 | 2e-13 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05300 | TCRTETOQM | 123 | 3e-36 | Tetracycline resistance protein TetO/TetQ/TetM family ... | |
>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05304 | HTHFIS | 600 | 0.0 | FIS bacterial regulatory protein HTH signature. | |
>HTHFIS#FIS bacterial regulatory protein HTH signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05307 | SECA | 28 | 0.022 | SecA protein signature. | |
>SECA#SecA protein signature. |
129 | APE05361 | APE05368 | N ![]() | Y ![]() | N | Pathogenicity Island (unbiased-composition) |
LocusTag | DNBias | CDNBias | %GCBias | Product | |
APE05361 | 0 | 11 | 0.473708 | Adenine permease AdeP | |
APE05362 | 2 | 11 | 1.430201 | Quinone reductase | |
APE05363 | 0 | 12 | 0.570322 | hypothetical protein | |
APE05364 | HTH-type transcriptional regulator YidZ | ||||
APE05365 | Multidrug resistance protein MdtL | ||||
APE05366 | hypothetical protein | ||||
APE05367 | tRNA modification GTPase MnmE | ||||
APE05368 | Membrane protein insertase YidC |
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05361 | TYPE3IMSPROT | 31 | 0.013 | Type III secretion system inner membrane S protein ... | |
>TYPE3IMSPROT#Type III secretion system inner membrane S protein | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05365 | TCRTETA | 58 | 2e-11 | Tetracycline resistance protein signature. | |
>TCRTETA#Tetracycline resistance protein signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05366 | SACTRNSFRASE | 38 | 3e-06 | Streptothricin acetyltransferase signature. | |
>SACTRNSFRASE#Streptothricin acetyltransferase signature. | |||||
ORFs having significant similarity with Known Virulence factors | |||||
LocusTag | Hits | Score | E-value | Comments | |
APE05368 | 60KDINNERMP | 814 | 0.0 | 60kDa inner membrane protein signature. | |
>60KDINNERMP#60kDa inner membrane protein signature. |