Protein viewers, Pymol, Jmol

Comparing different 3D-viewers
* JMOL * PYMOL * OpenAstex
Installed by STRAP always Linux Linux, Windows, Mac always
Operation system all X-Windows all all
Performance medium high high with accelerated video cards high
Memory consumption high low medium medium
# models per view many 1 many many
Shows superimposed proteins yes no yes yes

The alignment pane and the 3D-view are interoperable. Related links: http://biodesign.asu.edu/labs/assets/lindsay/molvis/MOL.html