Homology modelling - different residues of two proteins
[Menu-bar>Analyze>Comparison] Based on the current sequence alignment two aligned proteins are
compared residue by residue and all different residues are collected
in a table.
The table can be used in different ways:
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Homology modeling: Some protein viewers such as the Swiss-viewer
(http://www.expasy.org/spdbv/ can substitute residues in a
3D-structure.
With this dialog the commands to replace
the residues of the 3D-structure by the residues of a raw
sequence can be generated.
Alignment gaps are not considered.
Customization: These commands can be can be modified using the customize dialog.
The contents of the n-th column is referred to by backslash n.
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Differing positions may be used to generate residue annotations.
Related resources: 14983078