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'STRAP:multiple sequence alignments '
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charite.christo.strap.interfaces
Interface ProteinProteinSimilarity

All Superinterfaces:
HasProtein, ProteinProteinValue, ValueOfProtein
All Known Implementing Classes:
AlignmentScore
public interface ProteinProteinSimilarity
extends ProteinProteinValue

Returns high values for pairs of similar proteins and small values for dissimilar proteins.

Method Summary
 
Methods inherited from interface charite.christo.strap.interfaces.ProteinProteinValue
compute, getModificationCount, getOtherProtein, getValue, setColumnRange, setOtherProtein
 
Methods inherited from interface charite.christo.strap.interfaces.ValueOfProtein
setProtein
 
Methods inherited from interface charite.christo.interfaces.HasProtein
getProtein
 

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'STRAP:multiple sequence alignments '
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'The most important classes are StrapAlign, StrapProtein and StrapEvent.'