########################################
# Program: antigenic
# Rundate: Wed Aug 10 18:40:32 2005
# Report_format: motif
# Report_file: gyra_myctu.antigenic
########################################

#=======================================
#
# Sequence: GYRA_MYCTU     from: 1   to: 838
# HitCount: 39
#=======================================

Max_score_pos at "*"

(1) Score 1.231 length 19 at residues 659->677
              *
 Sequence: LVGAVLCSAGDDLLLVSAN
           |                 |
         659                 677

(2) Score 1.218 length 20 at residues 552->571
                 *
 Sequence: DDIVAHFFVCSTHDLILFFT
           |                  |
         552                  571

(3) Score 1.205 length 20 at residues 709->728
                *
 Sequence: DRLVSLNVVREGTYLLVATS
           |                  |
         709                  728

(4) Score 1.194 length 12 at residues 320->331
                *
 Sequence: RDAVAKVVINNL
           |          |
         320          331

(5) Score 1.194 length 9 at residues 761->769
               *
 Sequence: RLVGALIVD
           |       |
         761       769

(6) Score 1.177 length 9 at residues 619->627
               *
 Sequence: DAPYLVLAT
           |       |
         619       627

(7) Score 1.165 length 32 at residues 345->376
                                     *
 Sequence: MLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRR
           |                              |
         345                              376

(8) Score 1.152 length 12 at residues 307->318
                 *
 Sequence: SDRVGLRIVIEI
           |          |
         307          318

(9) Score 1.147 length 32 at residues 28->59
                                     *
 Sequence: YIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
           |                              |
          28                              59

(10) Score 1.142 length 11 at residues 102->112
                *
 Sequence: PWSLRYPLVDG
           |         |
         102         112

(11) Score 1.141 length 8 at residues 513->520
                *
 Sequence: REDVVVTI
           |      |
         513      520

(12) Score 1.134 length 24 at residues 388->411
                              *
 Sequence: AHILRGLVKALDALDEVIALIRAS
           |                      |
         388                      411

(13) Score 1.133 length 8 at residues 608->615
              *
 Sequence: IAQVIQIR
           |      |
         608      615

(14) Score 1.127 length 11 at residues 593->603
                *
 Sequence: GQHVANLLAFQ
           |         |
         593         603

(15) Score 1.126 length 6 at residues 647->652
              *
 Sequence: GIVAVN
           |    |
         647    652

(16) Score 1.123 length 15 at residues 267->281
                *
 Sequence: TSLVITELPYQVNHD
           |             |
         267             281

(17) Score 1.122 length 15 at residues 162->176
            *
 Sequence: EPTVLPSRFPNLLAN
           |             |
         162             176

(18) Score 1.119 length 9 at residues 92->100
             *
 Sequence: IYDSLVRMA
           |       |
          92       100

(19) Score 1.112 length 7 at residues 748->754
               *
 Sequence: KGVLTVM
           |     |
         748     754

(20) Score 1.110 length 16 at residues 413->428
                      *
 Sequence: TVDIARAGLIELLDID
           |              |
         413              428

(21) Score 1.102 length 9 at residues 430->438
              *
 Sequence: IQAQAILDM
           |       |
         430       438

(22) Score 1.099 length 9 at residues 230->238
             *
 Sequence: TAGLIVGSQ
           |       |
         230       238

(23) Score 1.093 length 6 at residues 773->778
               *
 Sequence: ELYAVT
           |    |
         773    778

(24) Score 1.091 length 13 at residues 573->585
                 *
 Sequence: QGRVYRAKAYDLP
           |           |
         573           585

(25) Score 1.089 length 6 at residues 441->446
             *
 Sequence: RRLAAL
           |    |
         441    446

(26) Score 1.089 length 8 at residues 333->340
            *
 Sequence: KHTQLQTS
           |      |
         333      340

(27) Score 1.087 length 9 at residues 197->205
              *
 Sequence: LADAVFWAL
           |       |
         197       205

(28) Score 1.085 length 7 at residues 254->260
              *
 Sequence: RGVVEVE
           |     |
         254     260

(29) Score 1.080 length 6 at residues 811->816
              *
 Sequence: TLLAIA
           |    |
         811    816

(30) Score 1.075 length 6 at residues 738->743
            *
 Sequence: EEYPVQ
           |    |
         738    743

(31) Score 1.067 length 7 at residues 216->222
               *
 Sequence: LAAVMGR
           |     |
         216     222

(32) Score 1.063 length 6 at residues 484->489
             *
 Sequence: AEIVDR
           |    |
         484    489

(33) Score 1.063 length 7 at residues 14->20
            *
 Sequence: RIEPVDI
           |     |
          14     20

(34) Score 1.055 length 6 at residues 285->290
              *
 Sequence: TSIAEQ
           |    |
         285    290

(35) Score 1.052 length 8 at residues 465->472
              *
 Sequence: LEDILAKP
           |      |
         465      472

(36) Score 1.048 length 7 at residues 71->77
              *
 Sequence: AKSARSV
           |     |
          71     77

(37) Score 1.038 length 6 at residues 498->503
               *
 Sequence: IIAADG
           |    |
         498    503

(38) Score 1.029 length 7 at residues 788->794
             *
 Sequence: ARQVRKA
           |     |
         788     794

(39) Score 1.025 length 7 at residues 457->463
           *
 Sequence: KIEAEIA
           |     |
         457     463


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