######################################## # Program: garnier # Rundate: Wed Aug 10 18:42:06 2005 # Report_format: tagseq # Report_file: rpob_myctu.garnier ######################################## #======================================= # # Sequence: RPOB_MYCTU from: 1 to: 1178 # HitCount: 288 # # DCH = 0, DCS = 0 # # Please cite: # Garnier, Osguthorpe and Robson (1978) J. Mol. Biol. 120:97-120 # # #======================================= . 10 . 20 . 30 . 40 . 50 MLEGCILADSRQSKTAASPSPSRPQSSSNNSVPGAPNRVSFAKLREPLEV helix HHHHHHHHHH H H H sheet EEEE E turns TTTT T TT TTT T coil CCCCCC CC CC CCCCCCC CCCC . 60 . 70 . 80 . 90 . 100 PGLLDVQTDSFEWLIGSPRWRESAAERGDVNPVGGLEEVLYELSPIEDFS helix H H HH HHHHH HHHH sheet EEEE EE E turns T T T T TTTT T coil CCC C CCC CCCCCC CCCCCC C C . 110 . 120 . 130 . 140 . 150 GSMSLSFSDPRFDDVKAPVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQ helix HHHHHHHHHHHHHHHHHHHHHH sheet EEE turns T T TTTTT coil CCCCC CCC CC CCCCCCCC . 160 . 170 . 180 . 190 . 200 TVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDETIDKSTDKTLH helix HHHHHHHH HHHHHHHHHHH sheet EEE EEE EEEEEEEEE EEE E turns TT T coil CC CCCC CC C . 210 . 220 . 230 . 240 . 250 SVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQIVE helix HHHHHH H H H sheet EEEEEE EEEEE EEEEEEE EEE turns T T TTT TTTTT T coil CCC C CC CCC . 260 . 270 . 280 . 290 . 300 RFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLF helix HH HHHHHHH HHHHHHHHH HHHHHHHHHHHH sheet E turns TTT T TT coil CCC CCCC CC CCCC . 310 . 320 . 330 . 340 . 350 FKEKRYDLARVGRYKVNKKLGLHVGEPITSSTLTEEDVVATIEYLVRLHE helix HHHHHHHHHHHHH HHHHHHHHHHHHHHH sheet E EEEEEEEE turns TTTT T T coil C CCCCCC . 360 . 370 . 380 . 390 . 400 GQTTMTVPGGVEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVV helix HHHHHH H HHHHH sheet EEE EEEE EEEEE EEEE turns TT TTTTTTT coil C CCCCC CC CCCCC . 410 . 420 . 430 . 440 . 450 RERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLT helix HHHH HH HHHHHHH sheet EEEE EEEEEEEE EEE EE turns T TT TT T coil CCC C CCCCC CCC CC . 460 . 470 . 480 . 490 . 500 HKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSL helix HHHHHHH sheet EEEEEEE EE EEEEE EEEEEEE turns T TTTTTT TT T coil CCCCCCC CC C CC . 510 . 520 . 530 . 540 . 550 SVYARVNPFGFIETPYRKVVDGVVSDEIVYLTADEEDRHVVAQANSPIDA helix HHHHHHHHHHHHH sheet EEEEEE EEE EEEEEEEEEEEE turns T TTTT T TTT coil CC C C CCC . 560 . 570 . 580 . 590 . 600 DGRFVEPRVLVRRKAGEVEYVPSSEVDYMDVSPRQMVSVATAMIPFLEHD helix HHHHHHH HH H H HHHHHHHHHHH sheet EEE EEEE EEEE EEEE turns T T T coil CC CCC CCC CC . 610 . 620 . 630 . 640 . 650 DANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVAEESGVI helix HHHHHHHHHHHHH HHHHHHHHHHHHH HHHHHHHH sheet EEEEEEE EE EE turns coil C CCCC . 660 . 670 . 680 . 690 . 700 EEVSADYITVMHDNGTRRTYRMRKFARSNHGTCANQCPIVDAGDRVEAGQ helix HHHHHHHH HHHHH sheet EEE EEEEEE EEEEEEE E turns T TTT TTTTTTTTTTT coil C CC CC . 710 . 720 . 730 . 740 . 750 VIADGPCTDDGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSI helix HHHHHHHHHH H HHHHHHH HHHHHHHHH sheet EEE EEEEE turns T TT T T coil C C CCCCC CCC . 760 . 770 . 780 . 790 . 800 HIEEHEIDARDTKLGAEEITRDIPNISDEVLADLDERGIVRIGAEVRDGD helix HHHHHHHHHHHH HHHHHH HHHHHHHHHH HH sheet E EEEEEEEE turns TT TT coil CC CCCCC . 810 . 820 . 830 . 840 . 850 ILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGI helix H HHHHHHHHHHHHHHHHHHHH sheet EEEE E EEEE turns T T TT coil CCCCCCCCC CC CCCC C . 860 . 870 . 880 . 890 . 900 RVFSREDEDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILP helix HHHHHHHHHHH HHHHHHH H H sheet EEE E EEE E EEEEEEE turns T TTT T TTT coil CCC C C CC . 910 . 920 . 930 . 940 . 950 VEDMPFLADGTPVDIILNTHGVPRRMNIGQILETHLGWCAHSGWKVDAAK helix HHHH H HHH sheet EEEE EEEEEE E EEEE E turns T T TT TTTTT TTTTT TT coil CCC CCCCC CC . 960 . 970 . 980 . 990 . 1000 GVPDWAARLPDELLEAQPNAIVSTPVFDGAQEAELQGLLSCTLPNRDGDV helix HHHH HHHHHHH HHHHHHH sheet EEEEE EEEEE EE turns T T TT TTTTT coil CCC CCC C CCCC . 1010 . 1020 . 1030 . 1040 . 1050 LVDADGKAMLFDGRSGEPFPYPVTVGYMYIMKLHHLVDDKIHARSTGPYS helix HHHHHH HHHHHHHHHHHHHH sheet EE EEE EEEEEEE EE E turns TTT TT T coil CCCCCC CCC . 1060 . 1070 . 1080 . 1090 . 1100 MITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGRV helix HHHHHHHH HHHHHHHH sheet EEEEE EE EE EEE turns T TTTTT coil C CCCC CCCCCCC CCC C . 1110 . 1120 . 1130 . 1140 . 1150 KVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIELREG helix H HHH HHHHHHHHHHHHHHH HHHHHHHHHHHHH sheet E EEE EEEEE turns coil CCCCCCCCC . 1160 . 1170 EDEDLERAAANLGINLSRNESASVEDLA helix HHHHHHHHHHHH HHHHHH sheet turns T coil CCCCCCCCC #--------------------------------------- # # Residue totals: H:458 E:288 T:164 C:268 # percent: H: 39.4 E: 24.8 T: 14.1 C: 23.1 # #---------------------------------------