Curriculum

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(Bifx topics)
(Misc. contributions)
Line 14: Line 14:
* Biochemical techniques
* Biochemical techniques
-
** ...
+
** Sequencing
=== Computer science ===
=== Computer science ===
* Programming
* Programming
-
* algorithms
+
* Algorithms
-
* svn
+
* Databases and data management
 +
* Source code management
== Bifx topics ==
== Bifx topics ==
Line 26: Line 27:
=== Core bifx topics ===
=== Core bifx topics ===
* Sequence analysis
* Sequence analysis
 +
** NGS
* Gene prediction
* Gene prediction
* Functional annotation
* Functional annotation
* Protein domains, structure, function, and evolution
* Protein domains, structure, function, and evolution
-
 
-
=== NGS ===
 
-
* ...
 
=== Medical informatics ===
=== Medical informatics ===
-
** Disease loci in the human genome
+
* Disease loci in the human genome
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** Genomes of disease vectors
+
* Genomes of infectious disease vectors
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** Personalized medicine / $1,000 genome
+
* Personalized medicine / $1,000 genome
-
** i2b2 (https://www.i2b2.org/)
+
* Biology and the bedside
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** caBIG (https://cabig.nci.nih.gov/)
+
** [https://www.i2b2.org/ i2b2]
-
** Microbial informatics
+
* Cancer informatics
 +
** [https://cabig.nci.nih.gov/ caBIG]
 +
* Microbial informatics

Revision as of 01:02, 1 September 2012

Rough draft of a recommended bioinformatics curriculum.

Editors note: We shouldn't go into topic detail here, rather jump off to other pages in the wiki.

Contents

Background topics

Knowledge from other fields that form the basis for bioinformatics.

Biology

Computer science

Bifx topics

Bifx topics can include those from informatics, computational biology, genomics, ...

Core bifx topics

Medical informatics

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