Educational services

From Bioinformatics.Org Wiki

(Difference between revisions)
Jump to: navigation, search
(Trainer-Led Program in Bioinformatics)
(45 intermediate revisions not shown)
Line 5: Line 5:
[[Image:online_course_1.png|right|300px|thumb|A screenshot of a live lecture held online]]
[[Image:online_course_1.png|right|300px|thumb|A screenshot of a live lecture held online]]
-
''Click [http://mat.edu.bioinformatics.org/sample/ here] for a sample lecture (reduced resolution) on Dchip.''
+
''Click [http://mat.edu.bioinformatics.org/sample/ here] for a sample lecture (reduced resolution) on dChip.''
For online courses, the Bioinformatics Organization uses a system for streaming the multimedia of live lectures. It incorporates the following features:
For online courses, the Bioinformatics Organization uses a system for streaming the multimedia of live lectures. It incorporates the following features:
Line 16: Line 16:
== Computer science topics ==
== Computer science topics ==
-
Level-100 courses in computer science use laboratory scenarios and data to introduce biologists to fundamental computing topics.
+
Our courses in computer science use laboratory scenarios and data to introduce biologists to fundamental computing topics.
-
Our CS101 courses are for biologists who are unfamiliar with some or all of the computer languages and tools used in the bioinformatics discipline. And our CS102 courses build upon the concepts introduced in the respective CS101 courses.  CS102 courses are project-based and use take-home assignments to acquaint the biologist with larger and more complex computing problems.
+
The CS101 courses are for biologists who are unfamiliar with some or all of the computer languages and tools used in the bioinformatics discipline, and our CS102 and CS103 courses build upon the concepts introduced.  CS102 and CS103 courses are project-based and use take-home assignments to acquaint the biologist with larger and more complex computing problems.
-
+
-
'''Computer Programming Series:'''
+
   
   
 +
; Computer Language Series
 +
* [[CS101 Introduction to Bioinformatics Programming]]
* [[CS101 Introduction to Bioinformatics Programming]]
 +
* [[CS201 High Performance Computing]]
* [[CS101A Perl for Biologists, Level 1]]
* [[CS101A Perl for Biologists, Level 1]]
* [[CS102A Perl for Biologists, Level 2]]
* [[CS102A Perl for Biologists, Level 2]]
Line 31: Line 32:
* [[CS102C MySQL for Biologists, Level 2]]
* [[CS102C MySQL for Biologists, Level 2]]
* [[CS101D MATLAB for Biologists, Level 1]]
* [[CS101D MATLAB for Biologists, Level 1]]
 +
* [[CS101D MATLAB for Biologists, Level 2]]
* [[CS101E Python for Biologists, Level 1]]
* [[CS101E Python for Biologists, Level 1]]
* [[CS102E Python for Biologists, Level 2]]
* [[CS102E Python for Biologists, Level 2]]
-
+
* [[CS101F Linux for Biologists, Level 1]]
-
'''Data Discovery & Acquisition Series:'''
+
* [[CS102F Linux for Biologists, Level 2]]
-
* [[CS111A Introduction to Genome Browsers]]
+
; Data Visualization Series
-
+
 
-
'''Miscellaneous:'''
+
* [[CS111 Introduction to Genome Browsers]]
-
+
* [[CS112A Image Processing for Biologists, Level 1]]
-
* [[CS121A Image Processing, Level 1]]
+
 
 +
; Machine Learning Series
 +
 
 +
* [[CS121 Introduction to Machine Learning]]
== Biology topics ==
== Biology topics ==
-
Level-200 courses in biology cover special topics that field but introduce analytical techniques that can be utilized by practitioners in any of the allied fields (CS, math, chemistry, engineering and physics).
+
Our courses in biology cover special topics in that field but introduce techniques for computational analysis that can be utilized by practitioners in any of the allied fields (CS, math, chemistry, engineering and physics).
-
+
-
'''Microarray Data Analysis Series:'''
+
-
+
-
* [[BI201A Gene Expression Analysis]]
+
-
* [[BI201B SNP Genotyping]]
+
-
* [[BI201C dChip for Gene Expression and SNP Genotyping]]
+
-
'''Network & Pathway Analysis Series:'''
+
; Sequence Analysis Series
-
* [[BI211A Protein-Protein Interactions]]
+
* [[BI101 Introduction to DNA and Protein Sequence Analysis]]
-
+
* [[BI231 NGS Data Analysis]]
-
'''Genomics Series:'''
+
* [[BI232 Primer Design]]
-
+
 
-
* [[BI221A Mitochondriomics]]
+
; Microarray Data Analysis Series
 +
 
 +
* [[BI201 Gene Expression Analysis]]
 +
* [[BI202 SNP Genotyping]]
 +
* [[BI203 dChip for Gene Expression and SNP Microarray Data Analysis]]
 +
 
 +
; Network & Pathway Analysis Series
 +
 
 +
* [[BI211 Protein-Protein Interactions]]
 +
 
 +
; Genomics Series
 +
 
 +
* [[BI221 Mitochondriomics]]
== Math topics ==
== Math topics ==
-
Level-100 courses in math use laboratory scenarios and data to introduce biologists to essential topics in mathematics.
+
Our courses in math use laboratory scenarios and data to introduce biologists to essential topics in mathematics.
   
   
-
Our MA101 courses are for biologists who are unfamiliar with some or all of the mathematical methods used in the bioinformatics discipline.
+
The MA101 courses are for biologists who are unfamiliar with some or all of the mathematical methods used in the bioinformatics discipline.
   
   
-
'''Biostatistics Series:'''
+
; Biostatistics Series
* [[MA101 Introduction to Data Analysis]]
* [[MA101 Introduction to Data Analysis]]
Line 72: Line 83:
== Registration ==
== Registration ==
-
+
 
-
''NB: The educational services website at Bioinformatics.Org requires a separate account.''
+
{{Course_registration}}
-
+
 
-
*  [http://www.bioinformatics.org/edu/login/signup.php Create a new account]
+
-
*  [http://www.bioinformatics.org/edu/login/index.php Log in]
+
-
+
== Calendar ==
== Calendar ==
''Click [http://www.bioinformatics.org/edu/calendar/view.php?view=upcoming here] for a calendar of educational events.''  
''Click [http://www.bioinformatics.org/edu/calendar/view.php?view=upcoming here] for a calendar of educational events.''  
-
== "Course Bundle" option ==
+
== On-demand option ==
   
   
-
A "Course Bundle" option is available for those individuals and organizations interested in getting unlimited access to most of our course offerings. The video lectures are pre-recorded - attendees can watch them on the internet, and download all the other course materials (slides, examples, software). The instructors are still available to answer questions, or clarify any issues pertaining to the materials. This option offers significant savings, when compared to taking each of our courses separately. It also provides a great deal of flexibility.  
+
"On-demand" courses come with pre-recorded lectures, and you may contact the instructor via email at your convenience. The certificate is also provided with this option, and there are substantial discounts compared with the tuition of live courses (please see the course descriptions for tuition information).
-
Price: $2000 per user (perpetual access).  
+
The on-demand courses contain all of the materials and lectures from the live courses, on DVD or via download.  Some of the videos are even recorded during live lectures.  The other materials included are PowerPoint slides, sample scripts, and sample data, which are referenced in the lectures.
-
Any new courses added in the first year will automatically become available to customer. Renewal fee of 20% applies for adding new courses in subsequent years.
+
; Current on-demand courses
 +
 
 +
* [[CS101A Perl for Biologists, Level 1]]
 +
* [[CS102A Perl for Biologists, Level 2]]
 +
* [[CS103A Perl for Biologists, Level 3]]
 +
* [[CS101B R for Biologists, Level 1]]
 +
* [[CS102B R for Biologists, Level 2]]
 +
* [[CS101C MySQL for Biologists, Level 1]]
 +
* [[CS101D MATLAB for Biologists, Level 1]]
 +
* [[CS101E Python for Biologists, Level 1]]
 +
* [[CS112A Image Processing for Biologists, Level 1]]
 +
* [[BI201 Gene Expression Analysis]]
 +
* [[BI202 SNP Genotyping]]
 +
* [[BI203 dChip for Gene Expression and SNP Microarray Data Analysis]]
 +
* [[BI231 NGS Data Analysis]]
 +
* [[MA101A Distributions, Tests and Graphics]]
 +
 
 +
; On-demand "Course Bundle"
 +
 
 +
The Course Bundle is an on-demand option available for prospective students that are interested in getting unlimited access to the above courses (taught by [[Shailender Nagpal]], Bioinformatics.Org's primary trainer). Price: $2,500 per Academic user and $3,800 per Commercial/Government user, for perpetual access to course materials such as slides, examples and videos. Any new courses created by this trainer in the first year will automatically become available to subscribers at no extra charge. A renewal fee of 20% applies for adding such courses in subsequent years.  
{{Course additional}}
{{Course additional}}
-
 
-
== "Self-paced learning" option ==
 
-
The "self-paced" learning option is for individuals who need to take a course when we are not offering the live online or onsite courses, and who choose to and can learn on their own. The lectures are viewed online at the student's convenience, and course materials are available for download. The instructors are still available to answer questions, or clarify any issues pertaining to the materials. This option offers significant savings, when compared to a live course.
+
== Trainer-Led Program in Bioinformatics and Genomics ==
-
Price: 40% off regular price (perpetual access). Please contact us for details.
+
The [[Bioinformatics Organization]] offers a trainer-led Program in Bioinformatics that is geared towards:  
 +
* Scientists who are eager to solve Genomics challenges themselves, therby increasing their productivity and innovation
 +
* Computer programmers who wish to learn more about practical bioinformatics and get some hands-on experience with biological data, statistics and computational biology algorithms
 +
* Recent bioinformatics graduates interested in learning about real life challenges in Genomics for drug discovery and disease research
 +
 
 +
The curriculum includes:
 +
 
 +
* Overview of the bioinformatics landscape: technologies and applications
 +
* Linux OS: commands, applications and scripting
 +
* Overview of open-source bioinformatics software applications
 +
* DNA and Protein Sequence Analysis
 +
* Data management with MySQL
 +
* Statistical data analysis with R
 +
* Scripting with Perl
 +
* High Performance Computing
 +
* Microarray (Gene Expression, CNV, Genotyping) data analysis
 +
* Next Generation Sequencing (NGS) data analysis
 +
 
 +
Price: $4,200 per attendee for the entire program. $2,800 for any 6 out of above 10 topics.
 +
 
 +
Duration: 10 weeks for entire program. Up to 3-4 hours of live instruction and interaction with trainer per week
 +
 
 +
Other logistics: Homework, quizzes and projects will be assigned and graded
 +
 
 +
This program is certified by the Bioinformatics Organization, Inc., the largest international affiliation in the field, and it will count as 34 "Continuing Scientific Education" (CSE) units (one unit per contact hour) within the Organization. Students completing the program will receive a certificate of completion.
 +
 
 +
{{Course additional}}
== Our clients ==
== Our clients ==

Revision as of 14:12, 23 October 2013

Contents

Introduction

The Bioinformatics Organization offers professional development courses for continuing scientific education. These are short, postgraduate-level courses on computational topics of interest to prospective and practicing researchers in the life sciences. Course titles and descriptions are below. We offer online and on-site courses, most of which can be customized for the needs of companies or organizations. Please contact us for further details.

A screenshot of a live lecture held online

Click here for a sample lecture (reduced resolution) on dChip.

For online courses, the Bioinformatics Organization uses a system for streaming the multimedia of live lectures. It incorporates the following features:

Computer science topics

Our courses in computer science use laboratory scenarios and data to introduce biologists to fundamental computing topics.

The CS101 courses are for biologists who are unfamiliar with some or all of the computer languages and tools used in the bioinformatics discipline, and our CS102 and CS103 courses build upon the concepts introduced. CS102 and CS103 courses are project-based and use take-home assignments to acquaint the biologist with larger and more complex computing problems.

Computer Language Series
Data Visualization Series
Machine Learning Series

Biology topics

Our courses in biology cover special topics in that field but introduce techniques for computational analysis that can be utilized by practitioners in any of the allied fields (CS, math, chemistry, engineering and physics).

Sequence Analysis Series
Microarray Data Analysis Series
Network & Pathway Analysis Series
Genomics Series

Math topics

Our courses in math use laboratory scenarios and data to introduce biologists to essential topics in mathematics.

The MA101 courses are for biologists who are unfamiliar with some or all of the mathematical methods used in the bioinformatics discipline.

Biostatistics Series

Registration

Registration for courses at Bioinformatics.Org takes two steps:

Step 1
If you haven't already done so, create an on-line account to access the educational section of our website. Please note that the registration for our educational system is separate from that of the main website; you will require another account.
Step 2
Register for the course by making a payment using either the on-line registration form (click on the name of the course where it appears in the list of upcoming courses; use this form only for PayPal payments and credit card payments via secured PayPal), or by sending in the registration form (PDF; use this form if paying by US checks, credit card or corporate purchase order).

Please also check the course tuition rates and discounts.

Calendar

Click here for a calendar of educational events.

On-demand option

"On-demand" courses come with pre-recorded lectures, and you may contact the instructor via email at your convenience. The certificate is also provided with this option, and there are substantial discounts compared with the tuition of live courses (please see the course descriptions for tuition information).

The on-demand courses contain all of the materials and lectures from the live courses, on DVD or via download. Some of the videos are even recorded during live lectures. The other materials included are PowerPoint slides, sample scripts, and sample data, which are referenced in the lectures.

Current on-demand courses
On-demand "Course Bundle"

The Course Bundle is an on-demand option available for prospective students that are interested in getting unlimited access to the above courses (taught by Shailender Nagpal, Bioinformatics.Org's primary trainer). Price: $2,500 per Academic user and $3,800 per Commercial/Government user, for perpetual access to course materials such as slides, examples and videos. Any new courses created by this trainer in the first year will automatically become available to subscribers at no extra charge. A renewal fee of 20% applies for adding such courses in subsequent years.

Please contact us for questions or additional information.

Trainer-Led Program in Bioinformatics and Genomics

The Bioinformatics Organization offers a trainer-led Program in Bioinformatics that is geared towards:

The curriculum includes:

Price: $4,200 per attendee for the entire program. $2,800 for any 6 out of above 10 topics.

Duration: 10 weeks for entire program. Up to 3-4 hours of live instruction and interaction with trainer per week

Other logistics: Homework, quizzes and projects will be assigned and graded

This program is certified by the Bioinformatics Organization, Inc., the largest international affiliation in the field, and it will count as 34 "Continuing Scientific Education" (CSE) units (one unit per contact hour) within the Organization. Students completing the program will receive a certificate of completion.

Please contact us for questions or additional information.

Our clients

Many researchers and scientists have benefited from our workshops; here are some testimonials:

Very interactive and rewarding. -- Edouard Cadieu, Ph.D., NIH/NHGRI
I really enjoyed the courses and look forward to future offerings. -- John Laycock, Ph.D., Amgen Inc.
I learned a lot and got really motivated. -- Carlos J. Blondel, Santiago, Chile

Our attendees come from far and wide; here's a partial list:

Additional information

Please contact us for questions or additional information.

Personal tools
Namespaces
Variants
Actions
wiki navigation
Toolbox