Software

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Contents

3D structure visualization

Applied Biosystems (ABI)

Affine gap

Alignment

Amplification

Analytical ultracentrifugation

Aneda

Assembly

Base calling

Bayesian methods

BioCoRE

BLAST

C. elegans

CASP

Chemical kinetics

Chemical structures

Chromatogram

Code generators

Comparative analysis

Comparative genetics

Composition

Correlation

Crystallography

Data analysis

Data flow

Data mining

Databases

Database interface

Database searching

Database segmentation

Denaturation

Dictionaries

Distance correlations

DNA sequence viewer

DNA sequencing

DNA structure

Drawing

Duplications

Electron density maps

EMBL

EMBOSS

EST

EST clustering similarity alignment

EVA

Evolution

Exons

Extensions

File conversion

Finite elements

Fold recognition

Format converters

GenBank entry visualization

Gene duplications

Gene expression

Gene finding

Gene regulation

Genetic distances

Genome annotation

Genome development libraries

Genome rearrangement

Genome retrieval

Genomic database system

Genomics

GFF

Global fitting

Graph theory

grep

Group-specific primers

Hidden Markov Models

Homologous genes

Inference

Java

Libraries

Maximum likelihood

MCMC

Medline

Melting temperature

Microarray analysis

Modeling

Molecular dynamics

Molecular editors

Molecular graphics

Molecular mechanics

Molecular modeling

Molecular simulations

Molecular structure analysis

Molecular visualization

Molecular weight

Monte Carlo

Motifs

MPI

Multiple

Multiple alignment editors

Multiple genome alignment

Multiple protein structure visualization

Multiple sequence alignment

Multiple sequence alignment drawing

MySQL

NAMD

Neural networks

NMR

Nucleic acids

Oligonucleotides

Online searching

Online tools

Parallel

Patterns

PCR

PDB

Perl

Phase

Phenotype analysis

Phylogenetics

Phylogenetic trees

Phylogenetic tree reconstruction

Phylogenomics

PostScript

POV-Ray

Prediction

Primers

PROSITE

Protein binding sites

Protein docking

Protein domains

Protein families

Protein interaction

Protein modelling

Protein structure

Protein structure prediction

Protein/DNA/RNA family clustering

PubMed

Python

Real-time visualization

Reannotation

Regular expressions

Regulatory sequence analysis

Rendered animations

RNA

RNA folding

RNA gene finder

RNA motif

RNA pseudoknots

RNA secondary structure

SCF

Secondary structure

SEPON

Sequences

Sequence alignment

Sequence analysis

Sequence comparisons

Sequence conversion

Sequence databases

Sequence editor

Sequence finishing

Sequence patterns

Sequence similarity

Sequence utilities

Sequencing

Smith-Waterman

Solid Angle calculation

Statistical mechanics

Steric size calculation

Structural alignments

Structural biology

Structure

Structure analysis

Structure prediction

Substitution

Substitution rates

SwissProt

Tcl/Tk

Thermodynamics

Threading

Trace

Trace chromatogram

Trace files

Trajectory analysis

Transcription factors

Trees

Tree of life

Tree viewers

tRNA searching

Visualization

VMD

Web robots

Workflow

Personal tools
Namespaces
Variants
Actions
wiki navigation
Toolbox