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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10259#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 549 fasta sequence
[CCGGTGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAA--AAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT--GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAC]
[+] EMBL BM582153 [CCGGTGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAACCGTTACCGTACGTTGCAAGGAGCTAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGTCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTC ]
[+] EMBL BM648331 [ ccGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAACCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM652579 [ ccgCTTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCTGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAA AAAAACAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGC ]
[+] EMBL BM626516 [ ccgGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAA AAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGC ]
[+] EMBL BM635306 [ ccgGGAGAGTCGGTGCATTTTGATCCATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAA AAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAC]
[+] EMBL BM637186 [ ATTTCATCGGCAGCCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAAAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCCGCCTGCTCGGCATCCTCAAGCTGGTGTACGATCTTGGATTCGCCCAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAA ]
[+] EMBL BM630981 [ ccgCGTTACCGTACGTTGCAAGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM644515 [ ccgGGAGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTT ]
consensusID : consensus_10259#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 510 fasta sequence
[CCGCCCACGCGTCCGAAAAGTTGGCACAAAAATGGCCCCTGCAACGACGCGTGTTGCATAATTTTTCCCTCTCGTAGTGAAAAACTACATCCCGTTTCACCGTTTTGTGTGTGTGTTTGTTTGTTGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAAAAACGAAGCAGGCTGGGGAGGTCGGGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAAAATACTACTACTGAAT]
[+] EMBL BM637229 [CCGCCCACGCGTCCGAAAAGTTGGCACAAAAATGGCCCCTGCAACGACGCGTGTTGCATAATTTTTCCCTCTCGTAGTGAAAAACTACATCCCGTTTCACCGTTTTGTGTGTGTGTTTGTTTGTTGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAAAAACGAAGCAGGCTGGGGAGGTCGGGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAAAATACTACTACTGAAT]
consensusID : consensus_10259#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 476 fasta sequence
[CCGCCCACGCGTCCG-CGTTACCGTACGTTGCAAGGAGCAAG---TTTGATCGTTTCGTCCGCAGAC-TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT--GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BM644891 [CCGCCCACGCGTCCG GTTACCGTACGTTGCAACGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAAAAAAAAAACGAAGCAGGCTGCGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM645325 [CCGCCCACGCGTCCGCCGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCG ]
[+] EMBL BM624440 [CCGCCCACGCGTCCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCGCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM596780 [CCGCCCACGCGTCCG GTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAA AAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGG ]
[+] EMBL BM599477 [CCGCCCACGCGTCCG CGTTACCGTACGTTGCAAGGAGCAAGTTATTTGATCGTTTCGTCCGCAGACTTCACGCAGATCAAAAGCAGTAA ]
[+] EMBL BM603825 [ ACGCGTCCG GTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTTGGATTCCCCAAGAAGAAGGCATAAGCAAAAGC AAAAAACGAAGCAGGCTGGGGAGGTCG GGCGTACGTGTAGTGGTGTGTTTGGAGCAAAGATGGAAAAACCGGGC ]
[+] EMBL BM603490 [ cCGCGGACG CG TGGGGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAA AAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAAC ]
[+] EMBL BM619924 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM631769 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM638327 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCTG ]
[+] EMBL BM619443 [ CCGCCGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGC ]
[+] EMBL BM624082 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCg ]
[+] EMBL BM640409 [ CCG CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM629058 [ ccgcaac CGTTACCGTACGTTGCAAGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGG ]
[+] EMBL BM585174 [ ccgGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGTAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
[+] EMBL BM591400 [ ccGGAGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCg ]
[+] EMBL BM636445 [ ccgGCAAG TTTGATCGTTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTgcg ]
[+] EMBL BX608745 [ TGATCGCTTCGTCCGCAGAC TCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAA AAAAAAACGAAGCAGGCTGCGGAGGTCGAGCGGCGT GTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10259#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 418 fasta sequence
[CCGCCCACGCGTCCGGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCCG]
[+] EMBL BM633154 [CCGCCCACGCGTCCGGCAAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCCG]
[+] EMBL BM649063 [ gaCCCACGCGTCCG AAGTTTGATCGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATA ]
[+] EMBL BM589729 [ ccgGTTTCGTCCGCAGACTCACGCAGATCAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGTCGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGCGGTGTCGGCCTGCTCGGCATCGTCAAGCTGGTGTACGATCTCGGATTCGCCAAAAAGAAGGCATAAGCAACAGC AAAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTC ]
consensusID : consensus_10259#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 383 fasta sequence
[CCGCCCACGCGTCCGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCAG]
[+] EMBL BM645700 [CCGCCCACGCGTCCGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCTGTTCGGCATCACGGTCGCGCTGTGTGGTGTCGGCCTGCTCGGCATCGCCAAGCTGGTGTACGATCTCGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGAGGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACATAAAATTTGCGTTTTTATTCCCTTCAAAACCCAG]
consensusID : consensus_10259#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence
[CAAGGAGCAAAGGAAAGTCAAACGAAACAGTTTGATCGCTTCGTCACGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCNTGTTCGGCATCNACGGTCGCGCTGTGCGGTGTCGGCCTGCTCCGGNCATCGTCAAGCTGGTGTACGATCTCNGATTCGC]
[+] EMBL BX619367 [CAAGGAGCAAAGGAAAGTCAAACGAAACAGTTTGATCGCTTCGTCACGCAGACTCACGCAGATCAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCAGTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCGAAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCNTGTTCGGCATCNACGGTCGCGCTGTGCGGTGTCGGCCTGCTCCGGNCATCGTCAAGCTGGTGTACGATCTCNGATTCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10259#1 ------------------------------------------------------------
consensus_10259#4 ------------------------------------------------------------
consensus_10259#2 ------------------------------------------------------------
consensus_10259#3 ------------------------------------------------------------
consensus_10259#0 CCGGTGCATCGAAGCAAGCCCCGCTGAAGCCGCTCTTCGGTTGCTAGGACACCGATGCCC 60
consensus_10259#5 ------------------------------------------------------------
consensus_10259#1 ---CCGCCCACGCGTCCGAAAAGTTGGCACAAAAATGGCCCCTGCAACGACGCGTGTTGC 57
consensus_10259#4 ------------------------------------------------------------
consensus_10259#2 -------------------------------------------------CCGCCCAC-GC 10
consensus_10259#3 ------------------------------------------------------------
consensus_10259#0 TTTTTCTTCCCACTCGCTGACAGTTGAAGGAGAGTCGGTGCATTTTGATCCATTTCATCG 120
consensus_10259#5 --------CAAGGAGCAAAGGAAAGTCAAACGAAACAGTTTGATCGCTTCGTCACGCAGA 52
consensus_10259#1 ATAATTTTTCCCTCTCGTAGTGAAAAACTACATCCCGTTTCACCGTTTTGTGTGTGTGTT 117
consensus_10259#4 ------------------------------------------------------------
consensus_10259#2 GTCCGCGTTACCGTACGTTGCAAGGAGCAA------GTTTGATCGTTTCGTCCGCAGACT 64
consensus_10259#3 ----------CCGCCCAC-GCGTCCGGCAA------GTTTGATCGTTTCGTCCGCAGACT 43
consensus_10259#0 GCAGCCGTTACCGTACGTTGCAAGGAGCAA------GTTTGATCGTTTCGTCCGCAGACT 174
consensus_10259#5 CTCACGCAGATCAAAAGCAGTAACCATCCAC--CATGGGTCACCATCCCGAGCCGCCAGT 110
consensus_10259#1 TGTTTGTTGCAGAT-CAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 176
consensus_10259#4 ------CCGCCCACGCGTCCGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 54
consensus_10259#2 CA-----CGCAGAT-CAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 118
consensus_10259#3 CA-----CGCAGAT-CAAAAGCAGTAACCATCCATTATGGGTCACCATCCCGAGCCGCCA 97
consensus_10259#0 CA-----CGCAGAT-CAAAAGCAGTAACCATCCACCATGGGTCACCATCCCGAGCCGCCA 228
consensus_10259#5 GATG-ATTTCGGAC-AAGCTGCCGGAATCGTT--GCGTAAG--AAGATGCTGACGTTCCA 164
* * ** * ** * * * * * ** * ** ***
consensus_10259#1 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 236
consensus_10259#4 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 114
consensus_10259#2 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 178
consensus_10259#3 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 157
consensus_10259#0 GTGATGATTTCGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 288
consensus_10259#5 G-GCGAAGAACGGACAAGCTGCCGGAATCGTTGCGTAAGAAGATGCTGACGTTCCAGGCG 223
* * * **************************************************
consensus_10259#1 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 295
consensus_10259#4 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 173
consensus_10259#2 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 237
consensus_10259#3 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 216
consensus_10259#0 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCT-GTTCGGCAT 347
consensus_10259#5 AAGAACGAGCTGCCCGTCTTCCTGAAGGGTGGTCCGGCCGATAAGGCCCNTGTTCGGCAT 283
************************************************* *********
consensus_10259#1 CA-CGGTCGCGCTGTGCGGTGTCGGCCTGCTC--GGCATCGTCAAGCTGGTGTACGATCT 352
consensus_10259#4 CA-CGGTCGCGCTGTGTGGTGTCGGCCTGCTC--GGCATCGCCAAGCTGGTGTACGATCT 230
consensus_10259#2 CA-CGGTCGCGCTGTGTGGTGTCGGCCTGCTC--GGCATCGCCAAGCTGGTGTACGATCT 294
consensus_10259#3 CA-CGGTCGCGCTGTGCGGTGTCGGCCTGCTC--GGCATCGTCAAGCTGGTGTACGATCT 273
consensus_10259#0 CA-CGGTCGCGCTGTGCGGTGTCGGCCTGCTC--GGCATCGTCAAGCTGGTGTACGATCT 404
consensus_10259#5 CNACGGTCGCGCTGTGCGGTGTCGGCCTGCTCCGGNCATCGTCAAGCTGGTGTACGATCT 343
* ************* *************** * ***** ******************
consensus_10259#1 TGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAA-----AAACGAAGCAGGCTGGGGA 407
consensus_10259#4 CGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGA 290
consensus_10259#2 CGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAACAAAAAAACGAAGCAGGCTGGGGA 354
consensus_10259#3 CGGATTCGCCAAAAAGAAGGCATAAGCAACAGCAAA-AAAAAAACGAAGCAGGCTGGGGA 332
consensus_10259#0 CGGATTCGCCAAGAAGAAGGCATAAGCAAAAGCAAA-AAAAAAACGAAGCAGGCTGGGGA 463
consensus_10259#5 CNGATTCGC--------------------------------------------------- 352
*******
consensus_10259#1 GGTCGGGCG-TACGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 466
consensus_10259#4 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 350
consensus_10259#2 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 414
consensus_10259#3 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 392
consensus_10259#0 GGTCGAGCGGCGTGTGTAGTGGTGTGTTTGGAGCAGAGATGGAAAAACCGGGCGTAACAT 523
consensus_10259#5 ------------------------------------------------------------
consensus_10259#1 AAAATTTGCGTTTTTATTCCCTTCAAAAAATACTACTACTGAAT---------------- 510
consensus_10259#4 AAAATTTGCGTTTTTATTCCCTTCAAAACCCAG--------------------------- 383
consensus_10259#2 AAAATTTGCGTTTTTATTCCCTTCAAAACCCTGAAAAAAAAAAAAAAAAAAAAAAAAAAA 474
consensus_10259#3 AAAATTTGCGTTTTTATTCCCTTCCG---------------------------------- 418
consensus_10259#0 AAAATTTGCGTTTTTATTCCCTTCAC---------------------------------- 549
consensus_10259#5 ------------------------------------------------------------
consensus_10259#1 --
consensus_10259#4 --
consensus_10259#2 AA 476
consensus_10259#3 --
consensus_10259#0 --
consensus_10259#5 --
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||