cluster # 1426

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Anopheles gambiae
cluster # 1426 cluster # 1426 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1426#0 length = 473 sequences # 1

consensus_1426#1 length = 324 sequences # 1

consensusID : consensus_1426#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 473
fasta sequence

                              [CCGCGAGGACTACATCTCGGACAAGCTGTACGATTCGAGAGGAAGGTTCGGAGAGATTCTGCTGCTACTGCCAGTGCTCCAATCGATCACGTGGCAGATGATACAGCAAATCGAGCTTGCTAAAATGTTCGGCGTCGCGCACATCGATAGCTTGCTGCAGGAAATGTTGCTCGGAGGCGACACTATCGATACCTCGTCGACGATCACCTCACCGATAAACATGATGAACACCAACAACAGCCCATCCGATTCGTGTGATACGACGCACCTCGCGCCATCGATCGGGGGCCCACCGGTGGACCACGAGGGGACCGACCCGCTAGTACAAATGTCATCGCTGAACGGACCGCCCGGCTACGGTGGCGATCCGGACGGTCTGCTCATGGACACGGTACCGAGCGCCAACAGCTACTGTACGCGCAAAGCGCCCGATCAGACCACACCAGATGCGCTCAATGGGCAGCTGCACGGTC]

[+] EMBL BM610598             [CCGCGAGGACTACATCTCGGACAAGCTGTACGATTCGAGAGGAAGGTTCGGAGAGATTCTGCTGCTACTGCCAGTGCTCCAATCGATCACGTGGCAGATGATACAGCAAATCGAGCTTGCTAAAATGTTCGGCGTCGCGCACATCGATAGCTTGCTGCAGGAAATGTTGCTCGGAGGCGACACTATCGATACCTCGTCGACGATCACCTCACCGATAAACATGATGAACACCAACAACAGCCCATCCGATTCGTGTGATACGACGCACCTCGCGCCATCGATCGGGGGCCCACCGGTGGACCACGAGGGGACCGACCCGCTAGTACAAATGTCATCGCTGAACGGACCGCCCGGCTACGGTGGCGATCCGGACGGTCTGCTCATGGACACGGTACCGAGCGCCAACAGCTACTGTACGCGCAAAGCGCCCGATCAGACCACACCAGATGCGCTCAATGGGCAGCTGCACGGTC]




>consensus_1426#0
CCGCGAGGACTACATCTCGGACAAGCTGTACGATTCGAGAGGAAGGTTCGGAGAGATTCT
GCTGCTACTGCCAGTGCTCCAATCGATCACGTGGCAGATGATACAGCAAATCGAGCTTGC
TAAAATGTTCGGCGTCGCGCACATCGATAGCTTGCTGCAGGAAATGTTGCTCGGAGGCGA
CACTATCGATACCTCGTCGACGATCACCTCACCGATAAACATGATGAACACCAACAACAG
CCCATCCGATTCGTGTGATACGACGCACCTCGCGCCATCGATCGGGGGCCCACCGGTGGA
CCACGAGGGGACCGACCCGCTAGTACAAATGTCATCGCTGAACGGACCGCCCGGCTACGG
TGGCGATCCGGACGGTCTGCTCATGGACACGGTACCGAGCGCCAACAGCTACTGTACGCG
CAAAGCGCCCGATCAGACCACACCAGATGCGCTCAATGGGCAGCTGCACGGTC

consensusID : consensus_1426#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 324
fasta sequence

                              [CGACCCACGCGTCCGCTCGGAGGCGACACTATCGATACCTCGTCGACGATCACCTCACCGATAAACATGATGAACACCAACAACAGCCCATCCGATTCGTGTGATACGACGCACCTCGCGCCATCGATCGGGGGCCCACCGGTGGACCACGAGGGGGCGGACCCGCTAGTACAAATGTCATCGCTGAACGGACCGCCCGGCTACGGTGGCGATCCGGACGGTCTGCTCATGGACACGGTACCGAGCGCCAACAGCTACTGTACGCGCAAGGCGCCCGATCAGACCACGCCGGATGCGCTCAATGGGCAGCTGCACGGTCCAAGG]

[+] EMBL BM624316             [CGACCCACGCGTCCGCTCGGAGGCGACACTATCGATACCTCGTCGACGATCACCTCACCGATAAACATGATGAACACCAACAACAGCCCATCCGATTCGTGTGATACGACGCACCTCGCGCCATCGATCGGGGGCCCACCGGTGGACCACGAGGGGGCGGACCCGCTAGTACAAATGTCATCGCTGAACGGACCGCCCGGCTACGGTGGCGATCCGGACGGTCTGCTCATGGACACGGTACCGAGCGCCAACAGCTACTGTACGCGCAAGGCGCCCGATCAGACCACGCCGGATGCGCTCAATGGGCAGCTGCACGGTCCAAGG]




>consensus_1426#1
CGACCCACGCGTCCGCTCGGAGGCGACACTATCGATACCTCGTCGACGATCACCTCACCG
ATAAACATGATGAACACCAACAACAGCCCATCCGATTCGTGTGATACGACGCACCTCGCG
CCATCGATCGGGGGCCCACCGGTGGACCACGAGGGGGCGGACCCGCTAGTACAAATGTCA
TCGCTGAACGGACCGCCCGGCTACGGTGGCGATCCGGACGGTCTGCTCATGGACACGGTA
CCGAGCGCCAACAGCTACTGTACGCGCAAGGCGCCCGATCAGACCACGCCGGATGCGCTC
AATGGGCAGCTGCACGGTCCAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1426#0      CCGCGAGGACTACATCTCGGACAAGCTGTACGATTCGAGAGGAAGGTTCGGAGAGATTCT 60
consensus_1426#1      ------------------------------------------------------------
                                                                                  

consensus_1426#0      GCTGCTACTGCCAGTGCTCCAATCGATCACGTGGCAGATGATACAGCAAATCGAGCTTGC 120
consensus_1426#1      ------------------------------------------------------------
                                                                                  

consensus_1426#0      TAAAATGTTCGGCGTCGCGCACATCGATAGCTTGCTGCAGGAAATGTTGCTCGGAGGCGA 180
consensus_1426#1      ----------------------------------CGACCCACGCGTCCGCTCGGAGGCGA 26
                                                        *  *          ************

consensus_1426#0      CACTATCGATACCTCGTCGACGATCACCTCACCGATAAACATGATGAACACCAACAACAG 240
consensus_1426#1      CACTATCGATACCTCGTCGACGATCACCTCACCGATAAACATGATGAACACCAACAACAG 86
                      ************************************************************

consensus_1426#0      CCCATCCGATTCGTGTGATACGACGCACCTCGCGCCATCGATCGGGGGCCCACCGGTGGA 300
consensus_1426#1      CCCATCCGATTCGTGTGATACGACGCACCTCGCGCCATCGATCGGGGGCCCACCGGTGGA 146
                      ************************************************************

consensus_1426#0      CCACGAGGGGACCGACCCGCTAGTACAAATGTCATCGCTGAACGGACCGCCCGGCTACGG 360
consensus_1426#1      CCACGAGGGGGCGGACCCGCTAGTACAAATGTCATCGCTGAACGGACCGCCCGGCTACGG 206
                      ********** * ***********************************************

consensus_1426#0      TGGCGATCCGGACGGTCTGCTCATGGACACGGTACCGAGCGCCAACAGCTACTGTACGCG 420
consensus_1426#1      TGGCGATCCGGACGGTCTGCTCATGGACACGGTACCGAGCGCCAACAGCTACTGTACGCG 266
                      ************************************************************

consensus_1426#0      CAAAGCGCCCGATCAGACCACACCAGATGCGCTCAATGGGCAGCTGCACGGTC----- 473
consensus_1426#1      CAAGGCGCCCGATCAGACCACGCCGGATGCGCTCAATGGGCAGCTGCACGGTCCAAGG 324
                      *** ***************** ** ****************************