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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1429#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence
[CCGGTGGTGCGCTTTTCCTCATCGCATCGTGTGAAAAGTTAGTGAAAAGTAAGCGCGGCGCAAAACGAAGGTAATTAGCGGTGCCGAAATCGGTTGTGAGTTGTGACAGAGTGTTTGAGTGCGTGTGTGTGTGGGAGCGCTGCTAGAAGTGCATTCCAGGTGAGCAGGCAGGGTGGTAGTGCCGCCGTCGCGGGCGGGCGAGCGGCGAGGTGGGAAACGAAAAGTTGTGACGTTGGCCGTGATCTAACTAAGCGCGTTCCAGCACAAGTTCCGTCGCGGAGAAGAGATCCCGCAAACCACTGCAAGCCAGCGTGCGCCGCCAGCTAGTGCACGGTTTGTTTGCTTTTTAGGGTAATGCAACGCAGCCAGCCCTGCGAGCATCCGCCCCGCAACAACAACAACAACAACAATAGCTGCAGCAACAAGGGCAGTGAAGATGGCGGCGACTTCATCGAACAACAGTAATAGCAATAGCATCAGCCCCACCAATAACAACAACAACAACAACAACAACGTGCACATCGAAACAGATGAGTTCATCAAGAAGAGCCGGGTGACGCGGGCGGCCCCACCGAAACCGGCCTACGATCCGCTACAGTTCGTGCAGATCAAGCCGGCCAAGCTGTACGATCGGAGCAAGGCGAACAACAAACCGTCGACCGAGCGGGA]
[+] EMBL BM655526 [CCGGTGGTGCGCTTTTCCTCATCGCATCGTGTGAAAAGTTAGTGAAAAGTAAGCGCGGCGCAAAACGAAGGTAATTAGCGGTGCCGAAATCGGTTGTGAGTTGTGACAGAGTGTTTGAGTGCGTGTGTGTGTGGGAGCGCTGCTAGAAGTGCATTCCAGGTGAGCAGGCAGGGTGGTAGTGCCGCCGTCGCGGGCGGGCGAGCGGCGAGGTGGGAAACGAAAAGTTGTGACGTTGGCCGTGATCTAACTAAGCGCGTTCCAGCACAAGTTCCGTCGCGGAGAAGAGATCCCGCAAACCACTGCAAGCCAGCGTGCGCCGCCAGCTAGTGCACGGTTTGTTTGCTTTTTAGGGTAATGCAACGCAGCCAGCCCTGCGAGCATCCGCCCCGCAACAACAACAACAACAACAATAGCTGCAGCAACAAGGGCAGTGAAGATGGCGGCGACTTCATCGAACAACAGTAATAGCAATAGCATCAGCCCCACCAATAACAACAACAACAACAACAACAACGTGCACATCGAAACAGATGAGTTCATCAAGAAGAGCCGGGTGACGCGGGCGGCCCCACCGAAACCGGCCTACGATCCGCTACAGTTCGTGCAGATCAAGCCGGCCAAGCTGTACGATCGGAGCAAGGCGAACAACAAACCGTCGACCGAGCGGGA]
consensusID : consensus_1429#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence
[CCGCCCACGCGTCCGGTACAAAAAGCTAGTGCGCGGAGGTGGTGCGCTTTTCCTCATCGCATCGTGTGAAAAGTTAGTGAAAAGTAAGCGCGGCGCAAAACGAAGATGGCGGCGACTTCATCGAACAACAGTAATAGCAATAGCATCAGCCCCACCAATAACAACAACAACAACAACAACAACGTGCACATCGAAACAGATGAGTTCATCAAGAAGAGCCGGGTGACGCGGGCGGCCCCACCGAAACCGGCCTACGATCCGCTACAGTTCGTGCAGATCAAGCCGGCCAAGCTGTACGATCCGAGCAAGGCGAACAACAAACCGTCGACCGAGCGGAAGCAGCAGGAGGTGAAGCCGCCCCGGGAGGTGGAGGACGCGGAGGAATGGCAGTGCAATCTGGACAATTGGAAGTCGTCGCGCAGGAAACGGGTGGAGCACATTATCGACAAGATTACCGAGGCGAAGAAGATCGAGCAGGAGGAGGTGTGCCGGGCGCGCAAAAAGTCGAAAACGTTTTCGGAAATGCTGGAAAACAGTGGATCGCGCCGACGGTTCATACTGCCGGAGAACGAGGACGATGACGAAGGGGCGAACTTTAGCAGCGACGATCTGCATGATCCCACCGATACCTCCAAGCAGCAGCAGCAGTAC]
[+] EMBL BM610560 [CCGCCCACGCGTCCGGTACAAAAAGCTAGTGCGCGGAGGTGGTGCGCTTTTCCTCATCGCATCGTGTGAAAAGTTAGTGAAAAGTAAGCGCGGCGCAAAACGAAGATGGCGGCGACTTCATCGAACAACAGTAATAGCAATAGCATCAGCCCCACCAATAACAACAACAACAACAACAACAACGTGCACATCGAAACAGATGAGTTCATCAAGAAGAGCCGGGTGACGCGGGCGGCCCCACCGAAACCGGCCTACGATCCGCTACAGTTCGTGCAGATCAAGCCGGCCAAGCTGTACGATCCGAGCAAGGCGAACAACAAACCGTCGACCGAGCGGAAGCAGCAGGAGGTGAAGCCGCCCCGGGAGGTGGAGGACGCGGAGGAATGGCAGTGCAATCTGGACAATTGGAAGTCGTCGCGCAGGAAACGGGTGGAGCACATTATCGACAAGATTACCGAGGCGAAGAAGATCGAGCAGGAGGAGGTGTGCCGGGCGCGCAAAAAGTCGAAAACGTTTTCGGAAATGCTGGAAAACAGTGGATCGCGCCGACGGTTCATACTGCCGGAGAACGAGGACGATGACGAAGGGGCGAACTTTAGCAGCGACGATCTGCATGATCCCACCGATACCTCCAAGCAGCAGCAGCAGTAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1429#0 -----------------------------------CCGGTGGTGCGCTTTTCCTCATCGC 25
consensus_1429#1 CCGCCCACGCGTCCGGTACAAAAAGCTAGTGCGCGGAGGTGGTGCGCTTTTCCTCATCGC 60
***********************
consensus_1429#0 ATCGTGTGAAAAGTTAGTGAAAAGTAAGCGCGGCGCAAAACGAAGGTAATTAGCGGTGCC 85
consensus_1429#1 ATCGTGTGAAAAGTTAGTGAAAAGTAAGCGCGGCGCAAAACGAAGATG----GCGGCGAC 116
********************************************* * **** * *
consensus_1429#0 GAAATCGGTTGTGAGTTGTGACAGAGTGTTTGAGTGCGTGTGTGTGTGGGAGCGCTGCTA 145
consensus_1429#1 TTCATCGAACAACAGTAATAGCAATAGCATCAGCCCCACCAATAACAACAACAACAACAA 176
**** *** * ** * * * * * * *
consensus_1429#0 GAAGTGCATTC-CAGGTGAGCAGGCAGGGTGGT-----AGTGCCGC-CGTCGCGGGCGGG 198
consensus_1429#1 CAACAACGTGCACATCGAAACAGATGAGTTCATCAAGAAGAGCCGGGTGACGCGGGCGGC 236
** * * * ** * *** * * * ** **** * *********
consensus_1429#0 CGAGCGGCGAGGTGGGAAACGAAAAGTTGTGACGTTGGCCGTGATCTAACTAAGCGCGTT 258
consensus_1429#1 CCCACCG-AAACCGGCCTACGATCCGCTACA--GTTCGTGCAGATCAAGCCGGCCAAGCT 293
* * * * ** **** * * *** * **** * * * * *
consensus_1429#0 CCAGCACAAGTTCCGTCGCGGAGAAGAGATCCCGCAAACCACTGCAAGCCAGCGTGCGCC 318
consensus_1429#1 ---GTACGATCCGAGCAAGGCGAACAACAAACCGTCGACCGAGCGGAAGCAGCAGGAGGT 350
* ** * * * * * * *** *** * **** * *
consensus_1429#0 GCCAGCTAGTGCACGGTTTGTTTGCTTTTTAGGGTAATGCAACGCAGCCAGCCCTGCGAG 378
consensus_1429#1 GA-AGCCGCCCCGGGAGGTGGAGGACGCGGAGGA-ATGGCAGTGCAATCTGGACAATTGG 408
* *** * * ** * *** * *** *** * * * *
consensus_1429#0 CATCCGCCCCGCAACAACAACAACAACAACAATAGCTGCAGCAACAAGGGCAGTGAAGAT 438
consensus_1429#1 AAGTCGTCGCGCAGGA--AACGGGTGGAGCA----CATTATCGACAAGATTACCGA---- 458
* ** * **** * *** * ** * * * ***** * **
consensus_1429#0 GGCGGCGACTTCATCGAACAACAGTAATAGCAATAG-CATCAGCCCCACCAATAACAACA 497
consensus_1429#1 GGCGAAGAAG--ATCGAGCAGGAGGAGGTGTGCCGGGCGCGCAAAAAGTCGAAAACGTTT 516
**** ** ***** ** ** * * * * * * ***
consensus_1429#0 ACAACAACAACAACAACGTGCACATCGAAACAGATGAGTTCATCAAGAAGAGCCGGGTGA 557
consensus_1429#1 TCGGAAATGCTGGAAAACAGTGGATCGCGCC-GACG-GTTCAT-----ACTGCCGGAGAA 569
* ** ** * **** * ** * ****** * ***** *
consensus_1429#0 CGCGGGCGGCCCCACCGAAACCGGCCTACGATCCGCTACAGTTCGTGCAGATCAAGCCGG 617
consensus_1429#1 CGAGGACGATGACGAAGGGGCGAACTTTAG--CAGCGACGATCTGCAT-GATCCCACCGA 626
** ** ** * * * * * * * ** ** * * **** ***
consensus_1429#0 CCAAGCTGTACGATCGGAGCAAGGCGAACAACAAACCGTCGACCGAGCGGGA 669
consensus_1429#1 TACCTCCAAGCAGCAGCAGCAGTAC--------------------------- 651
* * * **** *
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||