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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1448#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence
[CCGCGGACGCGTGGGTGCTGACCAGCGGTGCCGGAGGGAAAACGTAGTGCTCCCCACCGTTTTGTGTAGAATGTACGTGCGATTTGCGATTAAGCTTTACTGCCGACGCTGCCACACTGGACGCACATTACGCAAAGTAAAGAGAATCTGTGCACGATACTGACGAGTGCGAAAATGTCCGACGATGACACACCACGTACAGCTGTGTCCCCGCCATTAAACTGCGCAAAACCGGAGACCGCACCATCATCACCCGATGAGCTAGAACATCGCGAACAGCGGCAGCTCGCCGAAAAGGGGCAACCCGTGGTGGAGGATGTGAAAGTGAAACGTGAAACAGAACGAGAAACAGAACCGACCGAACTGAACGGTGCTAGTAGTAGGGTGCTGCCGCCGCCGCTGAACCGACCGGATGACCATGAAGCGATAACGAACAGGCAACGAAAATGCGTTCAATTTACGACCCCAGCAGCGGCGGGCAGCGCGACTGCCGACGACACGCTGCTCAAGTTTATCGAAGGTGAGGAAATATTGGACAAAGAGAACCCGTTCAAAACCGACGAGCAGGCGAGCGTGCTGGAGAAGCAATACGGTGCCGCACACCGCCAAACGGACAGTGTGCGCGATAAAACTTTTCCCGGTAACGCTGCCAGTATCGACGATGATGATGA]
[+] EMBL BM615353 [CCGCGGACGCGTGGGTGCTGACCAGCGGTGCCGGAGGGAAAACGTAGTGCTCCCCACCGTTTTGTGTAGAATGTACGTGCGATTTGCGATTAAGCTTTACTGCCGACGCTGCCACACTGGACGCACATTACGCAAAGTAAAGAGAATCTGTGCACGATACTGACGAGTGCGAAAATGTCCGACGATGACACACCACGTACAGCTGTGTCCCCGCCATTAAACTGCGCAAAACCGGAGACCGCACCATCATCACCCGATGAGCTAGAACATCGCGAACAGCGGCAGCTCGCCGAAAAGGGGCAACCCGTGGTGGAGGATGTGAAAGTGAAACGTGAAACAGAACGAGAAACAGAACCGACCGAACTGAACGGTGCTAGTAGTAGGGTGCTGCCGCCGCCGCTGAACCGACCGGATGACCATGAAGCGATAACGAACAGGCAACGAAAATGCGTTCAATTTACGACCCCAGCAGCGGCGGGCAGCGCGACTGCCGACGACACGCTGCTCAAGTTTATCGAAGGTGAGGAAATATTGGACAAAGAGAACCCGTTCAAAACCGACGAGCAGGCGAGCGTGCTGGAGAAGCAATACGGTGCCGCACACCGCCAAACGGACAGTGTGCGCGATAAAACTTTTCCCGGTAACGCTGCCAGTATCGACGATGATGATGA]
consensusID : consensus_1448#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence
[CCGCGGACGGTTATCGGAAATGGTTTATTTATTTTTCGTGTGACTTTTAGCAAACTTCTCGTCGTTCTACTTGCTGATAAGGTGCCGTCGCCATGCTGACCAGCGGTGCCGGAGGGAAAACGTAGTGCTCCCCACCGTTTTGTGTAGAATGTACGTGCGATTTGCGATTAAGCTTTACTGCCGACGCTGCCACACTGGACGCACATTACGCAAAGTAAAGAGAATCTGTGCACGATACTGACGAGTGCGAAAATGTCCGACGATGACACACCACGTACAGCTGTGTCCCCGCCATTAAACTGCGCAAAACCGGAGACCGCACCATCATCACCCGATGAGCTAGAACATCGCGAACAGCGGCAGCTCGCCGAAAAGGGGCAACCCGTGGTGGAGGATGTGAAAGTGAAACGTGAAACAGAACGAGAAACAGAACCGACCGAACTGAACGGTGCTAGTAGTAGGGTGCTGCCGCCGCCGCTGAACCGACCGGATGACCATGAAGCGATAACGAACAGGCAACGAAAATGCGTTCAATTTACGACCCCAGCAGCGGCGGGCAGCGCGACTGCCGACGA]
[+] EMBL BM589273 [CCGCGGACGGTTATCGGAAATGGTTTATTTATTTTTCGTGTGACTTTTAGCAAACTTCTCGTCGTTCTACTTGCTGATAAGGTGCCGTCGCCATGCTGACCAGCGGTGCCGGAGGGAAAACGTAGTGCTCCCCACCGTTTTGTGTAGAATGTACGTGCGATTTGCGATTAAGCTTTACTGCCGACGCTGCCACACTGGACGCACATTACGCAAAGTAAAGAGAATCTGTGCACGATACTGACGAGTGCGAAAATGTCCGACGATGACACACCACGTACAGCTGTGTCCCCGCCATTAAACTGCGCAAAACCGGAGACCGCACCATCATCACCCGATGAGCTAGAACATCGCGAACAGCGGCAGCTCGCCGAAAAGGGGCAACCCGTGGTGGAGGATGTGAAAGTGAAACGTGAAACAGAACGAGAAACAGAACCGACCGAACTGAACGGTGCTAGTAGTAGGGTGCTGCCGCCGCCGCTGAACCGACCGGATGACCATGAAGCGATAACGAACAGGCAACGAAAATGCGTTCAATTTACGACCCCAGCAGCGGCGGGCAGCGCGACTGCCGACGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1448#0 ------------------------------------------------------------
consensus_1448#1 CCGCGGACGGTTATCGGAAATGGTTTATTTATTTTTCGTGTGACTTTTAGCAAACTTCTC 60
consensus_1448#0 ----------------CCGCGGACGCGTGG--GTGCTGACCAGCGGTGCCGGAGGGAAAA 42
consensus_1448#1 GTCGTTCTACTTGCTGATAAGGTGCCGTCGCCATGCTGACCAGCGGTGCCGGAGGGAAAA 120
** *** * ***************************
consensus_1448#0 CGTAGTGCTCCCCACCGTTTTGTGTAGAATGTACGTGCGATTTGCGATTAAGCTTTACTG 102
consensus_1448#1 CGTAGTGCTCCCCACCGTTTTGTGTAGAATGTACGTGCGATTTGCGATTAAGCTTTACTG 180
************************************************************
consensus_1448#0 CCGACGCTGCCACACTGGACGCACATTACGCAAAGTAAAGAGAATCTGTGCACGATACTG 162
consensus_1448#1 CCGACGCTGCCACACTGGACGCACATTACGCAAAGTAAAGAGAATCTGTGCACGATACTG 240
************************************************************
consensus_1448#0 ACGAGTGCGAAAATGTCCGACGATGACACACCACGTACAGCTGTGTCCCCGCCATTAAAC 222
consensus_1448#1 ACGAGTGCGAAAATGTCCGACGATGACACACCACGTACAGCTGTGTCCCCGCCATTAAAC 300
************************************************************
consensus_1448#0 TGCGCAAAACCGGAGACCGCACCATCATCACCCGATGAGCTAGAACATCGCGAACAGCGG 282
consensus_1448#1 TGCGCAAAACCGGAGACCGCACCATCATCACCCGATGAGCTAGAACATCGCGAACAGCGG 360
************************************************************
consensus_1448#0 CAGCTCGCCGAAAAGGGGCAACCCGTGGTGGAGGATGTGAAAGTGAAACGTGAAACAGAA 342
consensus_1448#1 CAGCTCGCCGAAAAGGGGCAACCCGTGGTGGAGGATGTGAAAGTGAAACGTGAAACAGAA 420
************************************************************
consensus_1448#0 CGAGAAACAGAACCGACCGAACTGAACGGTGCTAGTAGTAGGGTGCTGCCGCCGCCGCTG 402
consensus_1448#1 CGAGAAACAGAACCGACCGAACTGAACGGTGCTAGTAGTAGGGTGCTGCCGCCGCCGCTG 480
************************************************************
consensus_1448#0 AACCGACCGGATGACCATGAAGCGATAACGAACAGGCAACGAAAATGCGTTCAATTTACG 462
consensus_1448#1 AACCGACCGGATGACCATGAAGCGATAACGAACAGGCAACGAAAATGCGTTCAATTTACG 540
************************************************************
consensus_1448#0 ACCCCAGCAGCGGCGGGCAGCGCGACTGCCGACGACACGCTGCTCAAGTTTATCGAAGGT 522
consensus_1448#1 ACCCCAGCAGCGGCGGGCAGCGCGACTGCCGACGA------------------------- 575
***********************************
consensus_1448#0 GAGGAAATATTGGACAAAGAGAACCCGTTCAAAACCGACGAGCAGGCGAGCGTGCTGGAG 582
consensus_1448#1 ------------------------------------------------------------
consensus_1448#0 AAGCAATACGGTGCCGCACACCGCCAAACGGACAGTGTGCGCGATAAAACTTTTCCCGGT 642
consensus_1448#1 ------------------------------------------------------------
consensus_1448#0 AACGCTGCCAGTATCGACGATGATGATGA 671
consensus_1448#1 -----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||