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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 708 fasta sequence
[CCGCCCACGCGTCCGATCTCCAATACAAACTCAAGCGTACACGGGAGGCAGCTTAAAATGGGGGGAAAAGCCAACACATTATTAGCCAGTTAATCAAACAGTTCAATAATAATAATATGCCCGGTATTTATAGATTACAACCAAACAACCAAGCACCCTTCTTCAACTGCCTGTACGCTTCTACTACTACCATTACTACTACTAAACTCGCTATATCCACCGAACACTTCCATTGGCACTTGCAGTAGGGAAGTCATTACCTATACCAAAAAGAAAAGCAAAAGTTAAAGTTTGAGCAACCGATAGCATGATTGCACGCCCAGAAACTGCATTCGCGCATAGAGCTATTTACAAAGAAGGTACAGAAGGACAGAGTAGTAACGGCCGAAGATATTAGACACGCCTCTCCCGAGCAGAAAAAGCCTATATTACAACACGAAAGCCTGTAGATATAGATAGAACTCGATCCAATTATAATAGCAAAGTGTAGCGTCCCTTGGCTCATCCTTCAATCCGTATCCCTCCCCCTTGGCAGCAGCCAGCACTATTTGTGCAATGGAAATGCCTCCAATAAGATGCGGGGAAAAAGGGACAAGGATACATATTAGTACAGACACCTGTTTAGTGTGTATAGCGTTTAATGCGGCGTTATCCTTTTTCCTCTCGATGTGGTCTGTTCTGGGTATTATTGGAGTACTGGGGCTCCGG]
[+] EMBL BM648430 [CCGCCCACGCGTCCGATCTCCAATACAAACTCAAGCGTACACGGGAGGCAGCTTAAAATGGGGGGAAAAGCCAACACATTATTAGCCAGTTAATCAAACAGTTCAATAATAATAATATGCCCGGTATTTATAGATTACAACCAAACAACCAAGCACCCTTCTTCAACTGCCTGTACGCTTCTACTACTACCATTACTACTACTAAACTCGCTATATCCACCGAACACTTCCATTGGCACTTGCAGTAGGGAAGTCATTACCTATACCAAAAAGAAAAGCAAAAGTTAAAGTTTGAGCAACCGATAGCATGATTGCACGCCCAGAAACTGCATTCGCGCATAGAGCTATTTACAAAGAAGGTACAGAAGGACAGAGTAGTAACGGCCGAAGATATTAGACACGCCTCTCCCGAGCAGAAAAAGCCTATATTACAACACGAAAGCCTGTAGATATAGATAGAACTCGATCCAATTATAATAGCAAAGTGTAGCGTCCCTTGGCTCATCCTTCAATCCGTATCCCTCCCCCTTGGCAGCAGCCAGCACTATTTGTGCAATGGAAATGCCTCCAATAAGATGCGGGGAAAAAGGGACAAGGATACATATTAGTACAGACACCTGTTTAGTGTGTATAGCGTTTAATGCGGCGTTATCCTTTTTCCTCTCGATGTGGTCTGTTCTGGGTATTATTGGAGTACTGGGGCTCCGG]
consensusID : consensus_1451#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 629 fasta sequence
[AGGGTAAAAGAAGCGAACGGAACACCTTAAATGGAAGCGCGGATGGTTCCTAAAAACGGCTTAAAATCTCCAATACAAACTCAAGCGTACACGGGAGGCAGCTTAAAACGGGGGGAAAAGCGAACACATTATTAGCCAGTTAATCAAACAGTTCAATAATTAATATGCCCGGTATTTATAGATTACAACCAAACAACCAAGCACCCTTCTTCAACTGCCTGTACGCTTCTACTACTACCATTACTGCTACTACTACTACACTCGCTATATCCACCGAACACTTCCACTGGCACTTGCAGTAGGGAAGTCATTACCTATACCAAAAAGAAAAGCAAAAGTTAAAGTTTGAGCAACTGATAGCATGATTGCACGCCCAGACACTGCATTCGCGCATAGAGCTATTTACAAAGAAGGTACAGAAGGACAGAGTAGTAACGGCCGAAGATATTAGACACGCCTCTCCCGAGCAGAAAAAGCCTATATTACAACACGAAAGCCTGTAGATATAGATAGAACTCGATCCAATTATAATAGCAAAGTGTAGCGTCCCTTGTCTCATCCTTCAATCCCCTATCATTGCCCCTTGGCCGCAGCCAGAACTATTTTGTGCAATGGAAATGCCTCCCATA]
[+] EMBL BX627458 [AGGGTAAAAGAAGCGAACGGAACACCTTAAATGGAAGCGCGGATGGTTCCTAAAAACGGCTTAAAATCTCCAATACAAACTCAAGCGTACACGGGAGGCAGCTTAAAACGGGGGGAAAAGCGAACACATTATTAGCCAGTTAATCAAACAGTTCAATAATTAATATGCCCGGTATTTATAGATTACAACCAAACAACCAAGCACCCTTCTTCAACTGCCTGTACGCTTCTACTACTACCATTACTGCTACTACTACTACACTCGCTATATCCACCGAACACTTCCACTGGCACTTGCAGTAGGGAAGTCATTACCTATACCAAAAAGAAAAGCAAAAGTTAAAGTTTGAGCAACTGATAGCATGATTGCACGCCCAGACACTGCATTCGCGCATAGAGCTATTTACAAAGAAGGTACAGAAGGACAGAGTAGTAACGGCCGAAGATATTAGACACGCCTCTCCCGAGCAGAAAAAGCCTATATTACAACACGAAAGCCTGTAGATATAGATAGAACTCGATCCAATTATAATAGCAAAGTGTAGCGTCCCTTGTCTCATCCTTCAATCCCCTATCATTGCCCCTTGGCCGCAGCCAGAACTATTTTGTGCAATGGAAATGCCTCCCATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1451#0 -------------------------------------------------CCGCCCACG-C 10
consensus_1451#1 AGGGTAAAAGAAGCGAACGGAACACCTTAAATGGAAGCGCGGATGGTTCCTAAAAACGGC 60
* *** *
consensus_1451#0 GTCCGATCTCCAATACAAACTCAAGCGTACACGGGAGGCAGCTTAAAATGGGGGGAAAAG 70
consensus_1451#1 TTAAAATCTCCAATACAAACTCAAGCGTACACGGGAGGCAGCTTAAAACGGGGGGAAAAG 120
* ******************************************* ***********
consensus_1451#0 CCAACACATTATTAGCCAGTTAATCAAACAGTTCAATAATAATAATATGCCCGGTATTTA 130
consensus_1451#1 CGAACACATTATTAGCCAGTTAATCAAACAGTTCAATAAT--TAATATGCCCGGTATTTA 178
* ************************************** ******************
consensus_1451#0 TAGATTACAACCAAACAACCAAGCACCCTTCTTCAACTGCCTGTACGCTTCTACTACTAC 190
consensus_1451#1 TAGATTACAACCAAACAACCAAGCACCCTTCTTCAACTGCCTGTACGCTTCTACTACTAC 238
************************************************************
consensus_1451#0 CATTACT------ACTACTAAACTCGCTATATCCACCGAACACTTCCATTGGCACTTGCA 244
consensus_1451#1 CATTACTGCTACTACTACTACACTCGCTATATCCACCGAACACTTCCACTGGCACTTGCA 298
******* ******* *************************** ***********
consensus_1451#0 GTAGGGAAGTCATTACCTATACCAAAAAGAAAAGCAAAAGTTAAAGTTTGAGCAACCGAT 304
consensus_1451#1 GTAGGGAAGTCATTACCTATACCAAAAAGAAAAGCAAAAGTTAAAGTTTGAGCAACTGAT 358
******************************************************** ***
consensus_1451#0 AGCATGATTGCACGCCCAGAAACTGCATTCGCGCATAGAGCTATTTACAAAGAAGGTACA 364
consensus_1451#1 AGCATGATTGCACGCCCAGACACTGCATTCGCGCATAGAGCTATTTACAAAGAAGGTACA 418
******************** ***************************************
consensus_1451#0 GAAGGACAGAGTAGTAACGGCCGAAGATATTAGACACGCCTCTCCCGAGCAGAAAAAGCC 424
consensus_1451#1 GAAGGACAGAGTAGTAACGGCCGAAGATATTAGACACGCCTCTCCCGAGCAGAAAAAGCC 478
************************************************************
consensus_1451#0 TATATTACAACACGAAAGCCTGTAGATATAGATAGAACTCGATCCAATTATAATAGCAAA 484
consensus_1451#1 TATATTACAACACGAAAGCCTGTAGATATAGATAGAACTCGATCCAATTATAATAGCAAA 538
************************************************************
consensus_1451#0 GTGTAGCGTCCCTTGGCTCATCCTTCAATCCG-TATCCCTCCCCCTTGGCAGCAGCCAGC 543
consensus_1451#1 GTGTAGCGTCCCTTGTCTCATCCTTCAATCCCCTATCATTGCCCCTTGGCCGCAGCCAGA 598
*************** *************** **** * ********* ********
consensus_1451#0 ACTATTT-GTGCAATGGAAATGCCTCCAATAAGATGCGGGGAAAAAGGGACAAGGATACA 602
consensus_1451#1 ACTATTTTGTGCAATGGAAATGCCTCCCATA----------------------------- 629
******* ******************* ***
consensus_1451#0 TATTAGTACAGACACCTGTTTAGTGTGTATAGCGTTTAATGCGGCGTTATCCTTTTTCCT 662
consensus_1451#1 ------------------------------------------------------------
consensus_1451#0 CTCGATGTGGTCTGTTCTGGGTATTATTGGAGTACTGGGGCTCCGG 708
consensus_1451#1 ----------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||