cluster # 151

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Anopheles gambiae
cluster # 151 cluster # 151 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_151#0 length = 487 sequences # 1

consensus_151#1 length = 260 sequences # 1

consensusID : consensus_151#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 487
fasta sequence

                              [GGGCGGACGCGTGGGTTTTTTTTTTCTGTTTTGTTGCTTGTTTTTGTTTCAAACAATCACATCTTTATAATGTTTCGGTTGCTTTGCTTGGGTCCACTTTCGAACTCTCCATCGTTTGATCTAAACCGTTCGTGTGTGTGTGTTGGTTTTGCAGTGTCAATTGCAAACAGAAAAGAAACACAACAACAAAAAAAAAGCAACAAAAACAAATTGCAAAACAGTGGAGCTAATGGGCCAAACCAAAACAAAACACGCGGATAAACGTAGAAACGGAAGAAAAAACGGAACAGAATGCAAGAAGAACGGTGTGACACACGTGTACTATACTGCAAGGTTTAAAAACAAACTCGATACTATTAAAAGCACTTTAAAAGGGGTAACAATAATGAAACATTGCTTAAGCGTCAAAGCGTGCGGTAGGTGATAAAGTCAAACAATGAACTTATACATGGATTGTTTAGCGGGGGCATGAACAGGAAAAGAAGAG]

[+] EMBL BM631285             [GGGCGGACGCGTGGGTTTTTTTTTTCTGTTTTGTTGCTTGTTTTTGTTTCAAACAATCACATCTTTATAATGTTTCGGTTGCTTTGCTTGGGTCCACTTTCGAACTCTCCATCGTTTGATCTAAACCGTTCGTGTGTGTGTGTTGGTTTTGCAGTGTCAATTGCAAACAGAAAAGAAACACAACAACAAAAAAAAAGCAACAAAAACAAATTGCAAAACAGTGGAGCTAATGGGCCAAACCAAAACAAAACACGCGGATAAACGTAGAAACGGAAGAAAAAACGGAACAGAATGCAAGAAGAACGGTGTGACACACGTGTACTATACTGCAAGGTTTAAAAACAAACTCGATACTATTAAAAGCACTTTAAAAGGGGTAACAATAATGAAACATTGCTTAAGCGTCAAAGCGTGCGGTAGGTGATAAAGTCAAACAATGAACTTATACATGGATTGTTTAGCGGGGGCATGAACAGGAAAAGAAGAG]




>consensus_151#0
GGGCGGACGCGTGGGTTTTTTTTTTCTGTTTTGTTGCTTGTTTTTGTTTCAAACAATCAC
ATCTTTATAATGTTTCGGTTGCTTTGCTTGGGTCCACTTTCGAACTCTCCATCGTTTGAT
CTAAACCGTTCGTGTGTGTGTGTTGGTTTTGCAGTGTCAATTGCAAACAGAAAAGAAACA
CAACAACAAAAAAAAAGCAACAAAAACAAATTGCAAAACAGTGGAGCTAATGGGCCAAAC
CAAAACAAAACACGCGGATAAACGTAGAAACGGAAGAAAAAACGGAACAGAATGCAAGAA
GAACGGTGTGACACACGTGTACTATACTGCAAGGTTTAAAAACAAACTCGATACTATTAA
AAGCACTTTAAAAGGGGTAACAATAATGAAACATTGCTTAAGCGTCAAAGCGTGCGGTAG
GTGATAAAGTCAAACAATGAACTTATACATGGATTGTTTAGCGGGGGCATGAACAGGAAA
AGAAGAG

consensusID : consensus_151#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 260
fasta sequence

                              [CCGCGGACGCGTGGGGAATGTTAGTTTATTTTGCGCTTCTCGGGACTTCCTGCGATGGGAGCGGAGGAGGAGAGGTCGCGCAACCCAGTTTACACGATTGCACACGCGAACACTTGCTCTTCTCTTGCCCAGCCAATAATGATATGCGCGCGTAAGTGCTGATTGAAATTTTAAACAAACGAAACAAGAAATAGACCAAACAGATCAATAAAAGAAAGAGCTCTGTTAACACTCCAATGAACAACATCTAGATTGGAGGG]

[+] EMBL BM594690             [CCGCGGACGCGTGGGGAATGTTAGTTTATTTTGCGCTTCTCGGGACTTCCTGCGATGGGAGCGGAGGAGGAGAGGTCGCGCAACCCAGTTTACACGATTGCACACGCGAACACTTGCTCTTCTCTTGCCCAGCCAATAATGATATGCGCGCGTAAGTGCTGATTGAAATTTTAAACAAACGAAACAAGAAATAGACCAAACAGATCAATAAAAGAAAGAGCTCTGTTAACACTCCAATGAACAACATCTAGATTGGAGGG]




>consensus_151#1
CCGCGGACGCGTGGGGAATGTTAGTTTATTTTGCGCTTCTCGGGACTTCCTGCGATGGGA
GCGGAGGAGGAGAGGTCGCGCAACCCAGTTTACACGATTGCACACGCGAACACTTGCTCT
TCTCTTGCCCAGCCAATAATGATATGCGCGCGTAAGTGCTGATTGAAATTTTAAACAAAC
GAAACAAGAAATAGACCAAACAGATCAATAAAAGAAAGAGCTCTGTTAACACTCCAATGA
ACAACATCTAGATTGGAGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_151#0      GGGCGGACGCGTGGGTTTTTTTTTTCTGTTTTGTTGCTTGTTTTTGTTTCAAACAATCAC 60
consensus_151#1      CCGCGGACGCGTGGGGAATGTTAGTTTATTTTGC-GCTTCTCGGGACTTCCTGCGATGGG 59
                       *************   * **  * * *****  **** *      ***   * **   

consensus_151#0      ATCTTTATAATGTTTCGGTTGCTTTGCTTGGGTC-CACTTTCGAACTCTCCATCGTTTGA 119
consensus_151#1      AGC--GGAGGAGGAGAGGTCGCGCAACCCAGTTTACACGATTGCACACGCGAACACTTGC 117
                     * *        *    *** **    *   * *  ***  * * ** * * * *  *** 

consensus_151#0      TCTAAACCGTTCGTGTGTGTGTGTTGGTTTTGCAGTGTCAATTGCAAACAGAAAAGAAAC 179
consensus_151#1      TCT--TCTCTTGCCCAGCCAATAATGATATGCGCGCGT-AAGTGCTGATTGAAATTTTAA 174
                     ***   *  **     *    *  ** * *    * ** ** ***  *  ****    * 

consensus_151#0      ACAACAACAAAAAAAAAGCAACAAAAACAAATTGCAAAACAGTGGAGCTAATGGGCCAAA 239
consensus_151#1      ACAA-ACGAAACAAGAAATAGACCAAACAGATCAATAAAAGAAAGAGCTCTGTTAACACT 233
                     **** *  *** ** **  *    ***** **    ***     *****       **  

consensus_151#0      CCAAAACAAAACACGCGGATAAACGTAGAAACGGAAGAAAAAACGGAACAGAATGCAAGA 299
consensus_151#1      CCAATGAACAACATCTAGATTGGAGGG--------------------------------- 260
                     ****   * ****    ***    *                                   

consensus_151#0      AGAACGGTGTGACACACGTGTACTATACTGCAAGGTTTAAAAACAAACTCGATACTATTA 359
consensus_151#1      ------------------------------------------------------------
                                                                                 

consensus_151#0      AAAGCACTTTAAAAGGGGTAACAATAATGAAACATTGCTTAAGCGTCAAAGCGTGCGGTA 419
consensus_151#1      ------------------------------------------------------------
                                                                                 

consensus_151#0      GGTGATAAAGTCAAACAATGAACTTATACATGGATTGTTTAGCGGGGGCATGAACAGGAA 479
consensus_151#1      ------------------------------------------------------------
                                                                                 

consensus_151#0      AAGAAGAG 487
consensus_151#1      --------