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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1095 fasta sequence
[CAGAATCGCCCCNGGNTTAAAGTGTATCATTCGGGTATGAAATGAATCAACGCAAACAAAAACAAACGAAAAAACGGGATACAAAAATGGGAAAATCTTAGCTGCTGCTTATTTTTGCTACAACGTATTACATTCATCAAAACTTCCTGCAAAAAAAAAGTGTAAAAATTGCTAAAACTCTAAAACATATAAAAGAAGAAACCGATCCTCTCGAACGCTACAGCGCTTTCTACGACGAACTCTATATGAAAACGATCTTTCGAAAACAAAAAGCAAACGGTATAACATAATATAACGATAGAATTGTTGCGTTGCGAACCGTTTGAAATGCACCTGTGTTTGTGCTCGCGCAACAGGCTTTTGCTCGCGCAGCCAAATTCGTCTTTCTCGCACACTGTGTTTCAAAACATTAGCTCTCTTTTTCTCACGCTTTCTTCTAAACCTTTCACCCCTCTACTTGCTCTTTGTAACGTTTCTCTCGTGTTANAAGAATACATTTTCTATAATATAAGTCAACCAACAAAAAACGGTTCAACCATTTGTACAGTCACAGGCATGACGGGTGAGGGACGACGCGCGTNACAACTATGTTCGACTTNACGTATAGCAGCCATGTGTTTCAGAAGGAAACACAGTTGCCTAATGGGATAATGGGTTACCAGGCNGAGGATCTGAGCGTATTAGTCACTTACCATGTAAAGAACAACCCCGTGGGCGCCANGGAATGGGTACGAAAGGTCCCGACAAAAACTGGGCCAGCATAAACGGCTGGACATTTCACATTCAACTTTCGACTATTCTAACCAACTAAGCGGGCAGCAGGTAACAGCGTATCTCTGCACCATGGGTAGGAGCTACCAGNATTNGGAACAATTNTCCACAATCTCCGGCTCCGNCTCGCACCCAACAGTCCACGAACAACCCCATGCTAAATTAAANTAAACCTCCTCCTCCCTCCGAAATCCTAGGTACACACCCTGGTTCGTGCACCCACAGANAACCCGTGAATTCACAACTCCAAGGCANATTCAAACAAGCTGGCCAATACGAGAAACCCCGCNGTTTGGAACCCNGACTNTTCCTCGTCCGGCCACA]
[+] EMBL AL693587 [CAGAATCGCCCCNGGNTTAAAGTGTATCATTCGGGTATGAAATGAATCAACGCAAACAAAAACAAACGAAAAAACGGGATACAAAAATGGGAAAATCTTAGCTGCTGCTTATTTTTGCTACAACGTATTACATTCATCAAAACTTCCTGCAAAAAAAAAGTGTAAAAATTGCTAAAACTCTAAAACATATAAAAGAAGAAACCGATCCTCTCGAACGCTACAGCGCTTTCTACGACGAACTCTATATGAAAACGATCTTTCGAAAACAAAAAGCAAACGGTATAACATAATATAACGATAGAATTGTTGCGTTGCGAACCGTTTGAAATGCACCTGTGTTTGTGCTCGCGCAACAGGCTTTTGCTCGCGCAGCCAAATTCGTCTTTCTCGCACACTGTGTTTCAAAACATTAGCTCTCTTTTTCTCACGCTTTCTTCTAAACCTTTCACCCCTCTACTTGCTCTTTGTAACGTTTCTCTCGTGTTANAAGAATACATTTTCTATAATATAAGTCAACCAACAAAAAACGGTTCAACCATTTGTACAGTCACAGGCATGACGGGTGAGGGACGACGCGCGTNACAACTATGTTCGACTTNACGTATAGCAGCCATGTGTTTCAGAAGGAAACACAGTTGCCTAATGGGATAATGGGTTACCAGGCNGAGGATCTGAGCGTATTAGTCACTTACCATGTAAAGAACAACCCCGTGGGCGCCANGGAATGGGTACGAAAGGTCCCGACAAAAACTGGGCCAGCATAAACGGCTGGACATTTCACATTCAACTTTCGACTATTCTAACCAACTAAGCGGGCAGCAGGTAACAGCGTATCTCTGCACCATGGGTAGGAGCTACCAGNATTNGGAACAATTNTCCACAATCTCCGGCTCCGNCTCGCACCCAACAGTCCACGAACAACCCCATGCTAAATTAAANTAAACCTCCTCCTCCCTCCGAAATCCTAGGTACACACCCTGGTTCGTGCACCCACAGANAACCCGTGAATTCACAACTCCAAGGCANATTCAAACAAGCTGGCCAATACGAGAAACCCCGCNGTTTGGAACCCNGACTNTTCCTCGTCCGGCCACA]
consensusID : consensus_1699#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 852 fasta sequence
[AGGCAGATCGGCCACGAGGGAGAAAACAACTACTACCACTACCCACTAATAGATCGGCTAAAGGACGCTAAACGGCGAGTGGAAAAGAAAAGCAAAAGCGGCGAAGAAAGTGAAAGGAACCAAAAAGCACACCAACAAGTTAGATAAGCCAAAGTGTATCATTCGGGGTTAATGAAATGTAATCCAACGCCAAACAAAAACCAAACGGAAAAAACGGGGATACAGAAATGGGGAAAATCTTAGCTGCTGCTTATTTTTGCGTACAACGTATTTCATTAATCNAAACTTCACGCAAAAAAAGTGTAAAAATTGCTATAACTCTNAAACATATTAAAAGAAGAAACCAATCCTCTCGAACGCTACAGCGCTTTCTACGACGAACTCTATATGAAAACGATCTTTCGAAAACAGAAAAGCAAACGGTATAACAGGAATATAACGATTGACATGTTGCGTTGCGAACCGTTTGAATGCGACCTGTGTTTGCGCCCGCGGCAACAGGCTTTTGCGTCGCGCAGCAAATTCGTCTTTCTCGGCACACTGTGTTTCAANAACATTAGCTCTCTCTTGTCTCACGCTTTCTTCTAAACCTTTCACCCCTCTAACTGCTCTTTGTAACNGTTTCNTCTCGTGTTAAACAGAATACATTTGTGCGTAATANNATANTAGGTCACAACGAAACAGACAACAGGGTTACACCANTGTGGTACCAGGAGTGACCACACGGGGAATTGAAAGGCGGTGTCATGGGGGAACGTGAANCGGCCGNCCGATTACCCAAGCTACATTGTTTTCGANCTTTTGAGTAGTTAAGNCAANACATGTGNGTTTCTACGGAANGGGCAGACAACA]
[+] EMBL BX467387 [AGGCAGATCGGCCACGAGGGAGAAAACAACTACTACCACTACCCACTAATAGATCGGCTAAAGGACGCTAAACGGCGAGTGGAAAAGAAAAGCAAAAGCGGCGAAGAAAGTGAAAGGAACCAAAAAGCACACCAACAAGTTAGATAAGCCAAAGTGTATCATTCGGGGTTAATGAAATGTAATCCAACGCCAAACAAAAACCAAACGGAAAAAACGGGGATACAGAAATGGGGAAAATCTTAGCTGCTGCTTATTTTTGCGTACAACGTATTTCATTAATCNAAACTTCACGCAAAAAAAGTGTAAAAATTGCTATAACTCTNAAACATATTAAAAGAAGAAACCAATCCTCTCGAACGCTACAGCGCTTTCTACGACGAACTCTATATGAAAACGATCTTTCGAAAACAGAAAAGCAAACGGTATAACAGGAATATAACGATTGACATGTTGCGTTGCGAACCGTTTGAATGCGACCTGTGTTTGCGCCCGCGGCAACAGGCTTTTGCGTCGCGCAGCAAATTCGTCTTTCTCGGCACACTGTGTTTCAANAACATTAGCTCTCTCTTGTCTCACGCTTTCTTCTAAACCTTTCACCCCTCTAACTGCTCTTTGTAACNGTTTCNTCTCGTGTTAAACAGAATACATTTGTGCGTAATANNATANTAGGTCACAACGAAACAGACAACAGGGTTACACCANTGTGGTACCAGGAGTGACCACACGGGGAATTGAAAGGCGGTGTCATGGGGGAACGTGAANCGGCCGNCCGATTACCCAAGCTACATTGTTTTCGANCTTTTGAGTAGTTAAGNCAANACATGTGNGTTTCTACGGAANGGGCAGACAACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1699#0 ------------------------------------------------------------
consensus_1699#1 AGGCAGATCGGCCACGAGGGAGAAAACAACTACTACCACTACCCACTAATAGATCGGCTA 60
consensus_1699#0 ------------------------------------------------------------
consensus_1699#1 AAGGACGCTAAACGGCGAGTGGAAAAGAAAAGCAAAAGCGGCGAAGAAAGTGAAAGGAAC 120
consensus_1699#0 ------------CAGAATCGCCCCNGGNTTAAAGTGTATCATTCGGGT---ATGAAATGA 45
consensus_1699#1 CAAAAAGCACACCAACAAGTTAGATAAGCCAAAGTGTATCATTCGGGGTTAATGAAATGT 180
** * ***************** ********
consensus_1699#0 A--TCAACGC-AAACAAAAAC-AAACGAAAAAAC--GGGATACAAAAATGGG-AAAATCT 98
consensus_1699#1 AATCCAACGCCAAACAAAAACCAAACGGAAAAAACGGGGATACAGAAATGGGGAAAATCT 240
* ****** ********** ***** ***** ******** ******* *******
consensus_1699#0 TAGCTGCTGCTTATTTTTGC-TACAACGTATTACATTCATCAAAACTTCCTGCAAAAAAA 157
consensus_1699#1 TAGCTGCTGCTTATTTTTGCGTACAACGTATTTCATTAATCNAAACTTCACGCAAAAAAA 300
******************** *********** **** *** ******* *********
consensus_1699#0 AAGTGTAAAAATTGCTAAAACTCTAAAACATAT-AAAAGAAGAAACCGATCCTCTCGAAC 216
consensus_1699#1 --GTGTAAAAATTGCTATAACTCTNAAACATATTAAAAGAAGAAACCAATCCTCTCGAAC 358
*************** ****** ******** ************* ************
consensus_1699#0 GCTACAGCGCTTTCTACGACGAACTCTATATGAAAACGATCTTTCGAAAACA-AAAAGCA 275
consensus_1699#1 GCTACAGCGCTTTCTACGACGAACTCTATATGAAAACGATCTTTCGAAAACAGAAAAGCA 418
**************************************************** *******
consensus_1699#0 AACGGTATAACAT-AATATAACGATAGAATTGTTGCGTTGCGAACCGTTTGAAATGCACC 334
consensus_1699#1 AACGGTATAACAGGAATATAACGATTGACATGTTGCGTTGCGAACCGTTTGAATGCGACC 478
************ *********** ** *********************** ***
consensus_1699#0 TGTGTTTGTGCTCGCG-CAACAGGCTTTTGC-TCGCGCAGCCAAATTCGTCTTTCTCG-C 391
consensus_1699#1 TGTGTTTGCGCCCGCGGCAACAGGCTTTTGCGTCGCGCAGC-AAATTCGTCTTTCTCGGC 537
******** ** **** ************** ********* **************** *
consensus_1699#0 ACACTGTGTTTCAAAA-CATTAGCTCTCTTTT-TCTCACGCTTTCTTCTAAACCTTTCAC 449
consensus_1699#1 ACACTGTGTTTCAANAACATTAGCTCTCTCTTGTCTCACGCTTTCTTCTAAACCTTTCAC 597
************** * ************ ** ***************************
consensus_1699#0 CCCTCTACTTGCTCTTTGTAACG--TTTCTCTCGTGTTANA-AGAATACATTT-TCTATA 505
consensus_1699#1 CCCTCTAACTGCTCTTTGTAACNGTTTCNTCTCGTGTTAAACAGAATACATTTGTGCGTA 657
******* ************* ** ********** * *********** * **
consensus_1699#0 ATATAA--GTCAACCAACAAAAAACGGTTCAACCATTTGTACAGTCACAGGCATGACGGG 563
consensus_1699#1 ATANNATANTAGGTCACAACGAAACAGACAACAGGGTTACACCANTGT-GGTACCAGGAG 716
*** * * ** * **** * * ** ** ** * * * *
consensus_1699#0 TGAGGG-ACGACGCGCGTNACAACTATGTT-CGACTTNACGTATAGCAGCCATGTGTTTC 621
consensus_1699#1 TGACCACACGGGGAATTGAAAGGCGGTGTCATGGGGGAACGTGAANCGGCCGNCCGATTA 776
*** *** * * * *** * **** * * *** * **
consensus_1699#0 AGAAGGAAACACAGTTGCCTAATGGGATAATGGGTTACCAGGCNGAGGATCTGAGCGTAT 681
consensus_1699#1 CCCAAGCTACATTGTTTTCGANC----TTTTGAGTAGTTAAGNC-AANACATGTGNGTTT 831
* * *** *** * * * ** ** * * * * ** * ** *
consensus_1699#0 TAGTCACTTACCATGTAAAGAACAACCCCGTGGGCGCCANGGAATGGGTACGAAAGGTCC 741
consensus_1699#1 ---CTACGGAANGGGCAGACAACA------------------------------------ 852
** * * * * ****
consensus_1699#0 CGACAAAAACTGGGCCAGCATAAACGGCTGGACATTTCACATTCAACTTTCGACTATTCT 801
consensus_1699#1 ------------------------------------------------------------
consensus_1699#0 AACCAACTAAGCGGGCAGCAGGTAACAGCGTATCTCTGCACCATGGGTAGGAGCTACCAG 861
consensus_1699#1 ------------------------------------------------------------
consensus_1699#0 NATTNGGAACAATTNTCCACAATCTCCGGCTCCGNCTCGCACCCAACAGTCCACGAACAA 921
consensus_1699#1 ------------------------------------------------------------
consensus_1699#0 CCCCATGCTAAATTAAANTAAACCTCCTCCTCCCTCCGAAATCCTAGGTACACACCCTGG 981
consensus_1699#1 ------------------------------------------------------------
consensus_1699#0 TTCGTGCACCCACAGANAACCCGTGAATTCACAACTCCAAGGCANATTCAAACAAGCTGG 1041
consensus_1699#1 ------------------------------------------------------------
consensus_1699#0 CCAATACGAGAAACCCCGCNGTTTGGAACCCNGACTNTTCCTCGTCCGGCCACA 1095
consensus_1699#1 ------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||