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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1745#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCGAGGATCGAACATTCGCTGCGCCACGGCGGATAGATAAAGGATTGTTCCTTTATCGCGAACACGTTTCTGACGCGCATCTGATGTCCGCCGGTGTTATAGCAGTTTCCGAAACCGATACGGTAGTGCTTTCCTTTCCTCCCCATAATCCATAGCATCGGTGGTTTGTGTGTATGTACATGAGTAAAACGCCCATCGTCCTGGCGTATCGCTTGGGGTGATTGTTCGCGCAGGTGCTCTTCCTTCCCGATACACGAACCACGGCGATCAAAGGCGAAGATCATGGCAACGGATTTGGAGGACATTGTGGAGCACATGATGCGGTTCGCCTGGCCGGACTACCTGGTGTTCGTGTCGATGCTGATGCTCTGCATCCTGATAGGCGTCTACTTCGGTTTTGTGCAACGGAAACCCAACACCGAGTCCGAGTATCTGATGGGTGGCCGGACAATGATGGTCTTCCCGATCGCCCTTTCCCTCATCGCTAGCTTCATTTCTGGCATTACCCTGCTCGGGCTACCGACGGAGGTGTACTCGTTCGGCATTCAGTACGTGTATGTGGCGCTCGGCGTAACGCTGATGGGCTTCGTGATGGGCTTCATCTACCTGCCGGTGTTTCACAAGCTCAACATCACATCCACGTACGAGTATCTGGAGACACG]
[+] EMBL BM630451 [CCGCCCACGCGTCCGCCCACGCGTCCGCGAGGATCGAACATTCGCTGCGCCACGGCGGATAGATAAAGGATTGTTCCTTTATCGCGAACACGTTTCTGACGCGCATCTGATGTCCGCCGGTGTTATAGCAGTTTCCGAAACCGATACGGTAGTGCTTTCCTTTCCTCCCCATAATCCATAGCATCGGTGGTTTGTGTGTATGTACATGAGTAAAACGCCCATCGTCCTGGCGTATCGCTTGGGGTGATTGTTCGCGCAGGTGCTCTTCCTTCCCGATACACGAACCACGGCGATCAAAGGCGAAGATCATGGCAACGGATTTGGAGGACATTGTGGAGCACATGATGCGGTTCGCCTGGCCGGACTACCTGGTGTTCGTGTCGATGCTGATGCTCTGCATCCTGATAGGCGTCTACTTCGGTTTTGTGCAACGGAAACCCAACACCGAGTCCGAGTATCTGATGGGTGGCCGGACAATGATGGTCTTCCCGATCGCCCTTTCCCTCATCGCTAGCTTCATTTCTGGCATTACCCTGCTCGGGCTACCGACGGAGGTGTACTCGTTCGGCATTCAGTACGTGTATGTGGCGCTCGGCGTAACGCTGATGGGCTTCGTGATGGGCTTCATCTACCTGCCGGTGTTTCACAAGCTCAACATCACATCCACGTACGAGTATCTGGAGACACG]
consensusID : consensus_1745#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence
[CCGCGGGCGAGGATCGAACATTCGCTGCGCCACGGCGGATAGATAAAGGATTGTCCCTTTATCGCGAACACGTTTCTGACGCGCATCTGATGTCCACCGGTGGTGTAGCAGCTTCCGAAACCGATACGGTAGTGCTTTCTTTCCCTCCCCTTAATCGATAGTATCGGTGGTTTGTGTGTTTTTGTGTCTGTGTACATGAGTAAAACGCCCATCGTCCTGGCGTGTCGTTTGGGGTGATTGCTCGCGCAGGTGCTCTTCCTTCCCGATACACGAACCACGGCGATCAAAGGCGAAGATCATGGCAACGGATTTGGAGGACATTGTGGAGCACATGAGGCGATTCGCCTGGCCGGACTACCTGGTGTTCGTGTCGATGCTGATGCTCTGCATCCTGATAGGCGTCTACTTCGGGTTTGTGCAACGGAAACCCAACACCGAGTCCGAGTATCTGATGGGTGGCCGGACAATGATGGTCTTCCCGATCGCCCTTTCCCTCATCGCTAGCTTCATTTCCGGCATTACCCTGCTCGGGCTACCGACGGAGGTGTATTCGTTCGGCATTCAGTACGTGTATGTG]
[+] EMBL BM605583 [CCGCGGGCGAGGATCGAACATTCGCTGCGCCACGGCGGATAGATAAAGGATTGTCCCTTTATCGCGAACACGTTTCTGACGCGCATCTGATGTCCACCGGTGGTGTAGCAGCTTCCGAAACCGATACGGTAGTGCTTTCTTTCCCTCCCCTTAATCGATAGTATCGGTGGTTTGTGTGTTTTTGTGTCTGTGTACATGAGTAAAACGCCCATCGTCCTGGCGTGTCGTTTGGGGTGATTGCTCGCGCAGGTGCTCTTCCTTCCCGATACACGAACCACGGCGATCAAAGGCGAAGATCATGGCAACGGATTTGGAGGACATTGTGGAGCACATGAGGCGATTCGCCTGGCCGGACTACCTGGTGTTCGTGTCGATGCTGATGCTCTGCATCCTGATAGGCGTCTACTTCGGGTTTGTGCAACGGAAACCCAACACCGAGTCCGAGTATCTGATGGGTGGCCGGACAATGATGGTCTTCCCGATCGCCCTTTCCCTCATCGCTAGCTTCATTTCCGGCATTACCCTGCTCGGGCTACCGACGGAGGTGTATTCGTTCGGCATTCAGTACGTGTATGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1745#0 CCGCCCACGCGTCCGCCCACGCGTCCGCGAGGATCGAACATTCGCTGCGCCACGGCGGAT 60
consensus_1745#1 --------------------CCGCGGGCGAGGATCGAACATTCGCTGCGCCACGGCGGAT 40
** **********************************
consensus_1745#0 AGATAAAGGATTGTTCCTTTATCGCGAACACGTTTCTGACGCGCATCTGATGTCCGCCGG 120
consensus_1745#1 AGATAAAGGATTGTCCCTTTATCGCGAACACGTTTCTGACGCGCATCTGATGTCCACCGG 100
************** **************************************** ****
consensus_1745#0 TGTTATAGCAGTTTCCGAAACCGATACGGTAGTGCTTTCCTTTCCTCCCCATAATCCATA 180
consensus_1745#1 TGGTGTAGCAGCTTCCGAAACCGATACGGTAGTGCTTTCTTTCCCTCCCCTTAATCGATA 160
** * ****** *************************** ** ******* ***** ***
consensus_1745#0 GCATCGGTGGTTTGTGTGT----------ATGTACATGAGTAAAACGCCCATCGTCCTGG 230
consensus_1745#1 GTATCGGTGGTTTGTGTGTTTTTGTGTCTGTGTACATGAGTAAAACGCCCATCGTCCTGG 220
* ***************** ******************************
consensus_1745#0 CGTATCGCTTGGGGTGATTGTTCGCGCAGGTGCTCTTCCTTCCCGATACACGAACCACGG 290
consensus_1745#1 CGTGTCGTTTGGGGTGATTGCTCGCGCAGGTGCTCTTCCTTCCCGATACACGAACCACGG 280
*** *** ************ ***************************************
consensus_1745#0 CGATCAAAGGCGAAGATCATGGCAACGGATTTGGAGGACATTGTGGAGCACATGATGCGG 350
consensus_1745#1 CGATCAAAGGCGAAGATCATGGCAACGGATTTGGAGGACATTGTGGAGCACATGAGGCGA 340
******************************************************* ***
consensus_1745#0 TTCGCCTGGCCGGACTACCTGGTGTTCGTGTCGATGCTGATGCTCTGCATCCTGATAGGC 410
consensus_1745#1 TTCGCCTGGCCGGACTACCTGGTGTTCGTGTCGATGCTGATGCTCTGCATCCTGATAGGC 400
************************************************************
consensus_1745#0 GTCTACTTCGGTTTTGTGCAACGGAAACCCAACACCGAGTCCGAGTATCTGATGGGTGGC 470
consensus_1745#1 GTCTACTTCGGGTTTGTGCAACGGAAACCCAACACCGAGTCCGAGTATCTGATGGGTGGC 460
*********** ************************************************
consensus_1745#0 CGGACAATGATGGTCTTCCCGATCGCCCTTTCCCTCATCGCTAGCTTCATTTCTGGCATT 530
consensus_1745#1 CGGACAATGATGGTCTTCCCGATCGCCCTTTCCCTCATCGCTAGCTTCATTTCCGGCATT 520
***************************************************** ******
consensus_1745#0 ACCCTGCTCGGGCTACCGACGGAGGTGTACTCGTTCGGCATTCAGTACGTGTATGTGGCG 590
consensus_1745#1 ACCCTGCTCGGGCTACCGACGGAGGTGTATTCGTTCGGCATTCAGTACGTGTATGTG--- 577
***************************** ***************************
consensus_1745#0 CTCGGCGTAACGCTGATGGGCTTCGTGATGGGCTTCATCTACCTGCCGGTGTTTCACAAG 650
consensus_1745#1 ------------------------------------------------------------
consensus_1745#0 CTCAACATCACATCCACGTACGAGTATCTGGAGACACG 688
consensus_1745#1 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||