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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1934#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1052 fasta sequence
[GAGGTTTACACTCATCCAATTTGGTGCCTCCGGTTAGACATTGTAGCGGGATATAATTGTATGTTTTTATGCTTTTTGAAAGTTTACTTTCCTCATGTGTTGTGTGCACTTTAGGCAGGGGAGACACTAACATAAGCGTTGCCTGTTTGCCCGTTGGGGAAAAACACAACAATTGCAATAGTTCTACAAGATTCTACAGCGAAAACAAACACAACGACCCATTGGAATATAGTGAACCATTGTTGTTGATAAACCCACCCGTGTGCGAAACATCAAACTAAGAAAACTCTCTCCGCGTCTTCTACTTTTACACACTGGATATTTGGTTCTCGGTATCTNGGCTTTCACGCAAGCGGCACTGAGCGCTTTTCACTTCTAAATGTNTCNCTCGAACACTNNNGCAATACTGACTCTTAGCCAGGNNAAACTATCGGCGACTTCCGCTCCAGCACACTTCTCCCCATCTNTTCTTCACTTCTCCTTCCTACCTACANGGCTCTGCTTGCTTGGGCGCCAGCCTCTNTCACACACGCACNTNCACCACTCTCCACACGCTCTGCTCACTGCTNNNGGCGGACTGCGTTGCCTCCCCCCGCTCTCCCCCCTTTTCTGCTGCGTCCCANCACACTGCTTGCACANCNCCTACTGCCCTCTACTCCATTCNACCCTCACTACTACTCTCCCGCGCACACGCGNCANAACCTCNCNAACGCACGGNTACNACAGGNCCCCTANACCCCTGGCCCCACATCNGGGGCATCTNCAAGGCNAACCAACCCCAACCCGCCCCGAGGGCTNGGTCAACCNAGACTACAGACAANTCAAGCANNANGGAGGCACCCAAACNCGGACCCGNANCCACCCGCCCCTCTACCGNCACACTGGCGACCACACCNTGGGCTGGCCAACCCCAATCACCACACACCCAGGCACACGGCGATCCCGGCTCCAGNCAGTNAGGACCTCNGGACCCCCCTATCNCGCCACCTACGNGGCACTCCCTCGGCCGTAACCACCCACANAAATAATAGCAAACACGGCACACATCACGN]
[+] EMBL AL694795 [GAGGTTTACACTCATCCAATTTGGTGCCTCCGGTTAGACATTGTAGCGGGATATAATTGTATGTTTTTATGCTTTTTGAAAGTTTACTTTCCTCATGTGTTGTGTGCACTTTAGGCAGGGGAGACACTAACATAAGCGTTGCCTGTTTGCCCGTTGGGGAAAAACACAACAATTGCAATAGTTCTACAAGATTCTACAGCGAAAACAAACACAACGACCCATTGGAATATAGTGAACCATTGTTGTTGATAAACCCACCCGTGTGCGAAACATCAAACTAAGAAAACTCTCTCCGCGTCTTCTACTTTTACACACTGGATATTTGGTTCTCGGTATCTNGGCTTTCACGCAAGCGGCACTGAGCGCTTTTCACTTCTAAATGTNTCNCTCGAACACTNNNGCAATACTGACTCTTAGCCAGGNNAAACTATCGGCGACTTCCGCTCCAGCACACTTCTCCCCATCTNTTCTTCACTTCTCCTTCCTACCTACANGGCTCTGCTTGCTTGGGCGCCAGCCTCTNTCACACACGCACNTNCACCACTCTCCACACGCTCTGCTCACTGCTNNNGGCGGACTGCGTTGCCTCCCCCCGCTCTCCCCCCTTTTCTGCTGCGTCCCANCACACTGCTTGCACANCNCCTACTGCCCTCTACTCCATTCNACCCTCACTACTACTCTCCCGCGCACACGCGNCANAACCTCNCNAACGCACGGNTACNACAGGNCCCCTANACCCCTGGCCCCACATCNGGGGCATCTNCAAGGCNAACCAACCCCAACCCGCCCCGAGGGCTNGGTCAACCNAGACTACAGACAANTCAAGCANNANGGAGGCACCCAAACNCGGACCCGNANCCACCCGCCCCTCTACCGNCACACTGGCGACCACACCNTGGGCTGGCCAACCCCAATCACCACACACCCAGGCACACGGCGATCCCGGCTCCAGNCAGTNAGGACCTCNGGACCCCCCTATCNCGCCACCTACGNGGCACTCCCTCGGCCGTAACCACCCACANAAATAATAGCAAACACGGCACACATCACGN]
consensusID : consensus_1934#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[TCTTGTTTCACACATTCTTAGCTTTTGTTTTTATTACTCTAAAATTATAATGAGAAATTAATTTTAAACGCTTGTGTTGAATTGTTTTTATCTTCTTCTTCTTGTTTGCTTATGTTTTTTTTTGTTTGTTTTGTTTCCCAAGGTATGAAGTAACCAAATATATGTTTTTTTCTTTTCTTTACACGCTACACTCATCCAATTTGGTGCCTCCGGTTTAAGACATTGTAGCGGGATATAATTGTATGTTTTTATGCTTTTTGAAAGTTTACTTTCCTCATGTGTTGTGTGCACTTTAGGCAGGGGAGACACTAACATAAGCGTTGCCTGTTTGCCCGTTGGGGAAAAACACAACAATTGCAATAGTTCTACAAGATTCTACAGCGAAAACAAACACAACGACCCATTGGAATATAGTGAACCATTGTTGTTGATAAACCCACCCGTGTGCGAAACATCAAACTAAGAAAACTCTCTCCGCGTCTTCTACTTTTAAATGGATATTTGTTTCGGTTTTGGTTTCAGAAGGGATGAGGTTTCATTTAATGTTTTTTGAAATTTTGCATACTGATCTTAGCAGTAATATTGGGATTTGTTAG]
[-] EMBL BX627423 [TCTTGTTTCACACATTCTTAGCTTTTGTTTTTATTACTCTAAAATTATAATGAGAAATTAATTTTAAACGCTTGTGTTGAATTGTTTTTATCTTCTTCTTCTTGTTTGCTTATGTTTTTTTTTGTTTGTTTTGTTTCCCAAGGTATGAAGTAACCAAATATATGTTTTTTTCTTTTCTTTACACGCTACACTCATCCAATTTGGTGCCTCCGGTTTAAGACATTGTAGCGGGATATAATTGTATGTTTTTATGCTTTTTGAAAGTTTACTTTCCTCATGTGTTGTGTGCACTTTAGGCAGGGGAGACACTAACATAAGCGTTGCCTGTTTGCCCGTTGGGGAAAAACACAACAATTGCAATAGTTCTACAAGATTCTACAGCGAAAACAAACACAACGACCCATTGGAATATAGTGAACCATTGTTGTTGATAAACCCACCCGTGTGCGAAACATCAAACTAAGAAAACTCTCTCCGCGTCTTCTACTTTTAAATGGATATTTGTTTCGGTTTTGGTTTCAGAAGGGATGAGGTTTCATTTAATGTTTTTTGAAATTTTGCATACTGATCTTAGCAGTAATATTGGGATTTGTTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1934#0 ------------------------------------------------------------
consensus_1934#1 TCTTGTTTCACACATTCTTAGCTTTTGTTTTTATTACTCTAAAATTATAATGAGAAATTA 60
consensus_1934#0 ------------------------------------------------------------
consensus_1934#1 ATTTTAAACGCTTGTGTTGAATTGTTTTTATCTTCTTCTTCTTGTTTGCTTATGTTTTTT 120
consensus_1934#0 ------------------------------------------------------------
consensus_1934#1 TTTGTTTGTTTTGTTTCCCAAGGTATGAAGTAACCAAATATATGTTTTTTTCTTTTCTTT 180
consensus_1934#0 GAGGTTTACACTCATCCAATTTGGTGCCTCCGGTT--AGACATTGTAGCGGGATATAATT 58
consensus_1934#1 ACACGCTACACTCATCCAATTTGGTGCCTCCGGTTTAAGACATTGTAGCGGGATATAATT 240
***************************** ***********************
consensus_1934#0 GTATGTTTTTATGCTTTTTGAAAGTTTACTTTCCTCATGTGTTGTGTGCACTTTAGGCAG 118
consensus_1934#1 GTATGTTTTTATGCTTTTTGAAAGTTTACTTTCCTCATGTGTTGTGTGCACTTTAGGCAG 300
************************************************************
consensus_1934#0 GGGAGACACTAACATAAGCGTTGCCTGTTTGCCCGTTGGGGAAAAACACAACAATTGCAA 178
consensus_1934#1 GGGAGACACTAACATAAGCGTTGCCTGTTTGCCCGTTGGGGAAAAACACAACAATTGCAA 360
************************************************************
consensus_1934#0 TAGTTCTACAAGATTCTACAGCGAAAACAAACACAACGACCCATTGGAATATAGTGAACC 238
consensus_1934#1 TAGTTCTACAAGATTCTACAGCGAAAACAAACACAACGACCCATTGGAATATAGTGAACC 420
************************************************************
consensus_1934#0 ATTGTTGTTGATAAACCCACCCGTGTGCGAAACATCAAACTAAGAAAACTCTCTCCGCGT 298
consensus_1934#1 ATTGTTGTTGATAAACCCACCCGTGTGCGAAACATCAAACTAAGAAAACTCTCTCCGCGT 480
************************************************************
consensus_1934#0 CTTCTACTTTTACACACTGGATATTTGGTTCTCGGTATCTNGGCTTTCACGCAAGCGGCA 358
consensus_1934#1 CTTCTACTTTTAAA---TGGATATTTG--TTTCGGT--TTTGGTTTCAGAAGGGATGAGG 533
************ * ********** * ***** * ** ** *
consensus_1934#0 CTGAGCGCTTTTCACTTCTAAATGTNTCNCTCGAACACTNNN-GCAATACTGACTCTTAG 417
consensus_1934#1 TTTCATTTAATGTTTTTTGAAATTTTGCATACTGATCTTAGCAGTAATATTGGGATTT-G 592
* * ** **** * * * * * * **** ** ** *
consensus_1934#0 CCAGGNNAAACTATCGGCGACTTCCGCTCCAGCACACTTCTCCCCATCTNTTCTTCACTT 477
consensus_1934#1 TTAG-------------------------------------------------------- 596
**
consensus_1934#0 CTCCTTCCTACCTACANGGCTCTGCTTGCTTGGGCGCCAGCCTCTNTCACACACGCACNT 537
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 NCACCACTCTCCACACGCTCTGCTCACTGCTNNNGGCGGACTGCGTTGCCTCCCCCCGCT 597
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 CTCCCCCCTTTTCTGCTGCGTCCCANCACACTGCTTGCACANCNCCTACTGCCCTCTACT 657
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 CCATTCNACCCTCACTACTACTCTCCCGCGCACACGCGNCANAACCTCNCNAACGCACGG 717
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 NTACNACAGGNCCCCTANACCCCTGGCCCCACATCNGGGGCATCTNCAAGGCNAACCAAC 777
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 CCCAACCCGCCCCGAGGGCTNGGTCAACCNAGACTACAGACAANTCAAGCANNANGGAGG 837
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 CACCCAAACNCGGACCCGNANCCACCCGCCCCTCTACCGNCACACTGGCGACCACACCNT 897
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 GGGCTGGCCAACCCCAATCACCACACACCCAGGCACACGGCGATCCCGGCTCCAGNCAGT 957
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 NAGGACCTCNGGACCCCCCTATCNCGCCACCTACGNGGCACTCCCTCGGCCGTAACCACC 1017
consensus_1934#1 ------------------------------------------------------------
consensus_1934#0 CACANAAATAATAGCAAACACGGCACACATCACGN 1052
consensus_1934#1 -----------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||