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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2068#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 639 fasta sequence
[AGGCAAGAATCGCCCGAGGTTATCGTGTCGCGCATTAGCTCGCTGCGTGTTTACTACCNGAACGATCTGCGCCCGGCAGACAATCGCCGCTCGGTGCTGAAAACGATCGAGGAGGTGAAGAAGCGTTTCCCGCAGGGTACCGCCACTGCTGAACCCGATCACCGATATGCACATCAAGGAGAAGGAGTTCCAGGGCATAGTGGACATGATCGACAAGTTCGAGAAGCGCCTGTTCGCCACCCGTGCACGAGTCGGCCGGGCTCGAGCGGCTGTACGCGCAGTACATGAGCAAGCTGGAGCTGGAGAAGGAGCTGCGCAACGAGNAAGAATGCGCTGCGTGAAGCGCGCAGCCTGCTGCAGATGAGCGAGCTGAAGCACCGGAAGCGGGTGCTGCGACGATTGGGCTACTGTACGGCGGCGGACGTGATCGAGTTCAAGGGGCGCGTTGCGTGCGAGCTGAGCTGCGCGGACGAGCTGCTCATCACCGACAATGGTGTTTAACGGTACGTTTACCGACCTGACGCCGTCGCAATCGTGCGCCCTGCTGAGCTGCATTCAGTGTGCGATGAGAAGAGCAGCGAAATGCCGGCCAGCAGACCCAAGAGCATGTCCGGTCCGCATGCGACAGAATGCAGGATC]
[+] EMBL AL695547 [AGGCAAGAATCGCCCGAGGTTATCGTGTCGCGCATTAGCTCGCTGCGTGTTTACTACCNGAACGATCTGCGCCCGGCAGACAATCGCCGCTCGGTGCTGAAAACGATCGAGGAGGTGAAGAAGCGTTTCCCGCAGGGTACCGCCACTGCTGAACCCGATCACCGATATGCACATCAAGGAGAAGGAGTTCCAGGGCATAGTGGACATGATCGACAAGTTCGAGAAGCGCCTGTTCGCCACCCGTGCACGAGTCGGCCGGGCTCGAGCGGCTGTACGCGCAGTACATGAGCAAGCTGGAGCTGGAGAAGGAGCTGCGCAACGAGNAAGAATGCGCTGCGTGAAGCGCGCAGCCTGCTGCAGATGAGCGAGCTGAAGCACCGGAAGCGGGTGCTGCGACGATTGGGCTACTGTACGGCGGCGGACGTGATCGAGTTCAAGGGGCGCGTTGCGTGCGAGCTGAGCTGCGCGGACGAGCTGCTCATCACCGACAATGGTGTTTAACGGTACGTTTACCGACCTGACGCCGTCGCAATCGTGCGCCCTGCTGAGCTGCATTCAGTGTGCGATGAGAAGAGCAGCGAAATGCCGGCCAGCAGACCCAAGAGCATGTCCGGTCCGCATGCGACAGAATGCAGGATC]
consensusID : consensus_2068#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 609 fasta sequence
[AGGCAAGAATCGGNCGAGGTGATTAAGCTGGAGCTGGAGAAGGAGCTGCGCAACGAGAAGAATGCGCTGCGTGAAGCGCGCAGCCTGCTGCAGATGAGCGAGCTGAAGCACCGGAAGCGGGTGCTGCGACGATTGGGCTACTGTACGGCGGCGGACGTGATCGAGTTCAAGGGGCGCGTAGCGTGCGAGCTGAGCTGCGCGGACGAGCTGCTCATCACCGAGATGGTGTTTAACGGTACGTTTACCGACCTGACGCCGTCGCAATCGTGCGCCCTGCTGAGCTGCTTCGTGTGCGATGAGAAGAGCAGCGAAATGCCGGCAGCGACCCACGAGCTGTCCGGTCCGCTGCGACAGATGCAGGATCTGGCGCGGCGCATTGCGAAGGTGTCGAACGAGTGCAAGGTGGAGGTGGACGAGGAGCGCTACGTGGAATCGTTCAAACCGTTCCTGATGGATGTGGTACTGTGCTAGGTGCAAGGGCGCCTCGTTCGCGCAGCTCTGCAAGATGACGGACATCTTCGAGGGCTCCAGTCATTCGCTGTATGCGCCGGCTGGAGGAGCTGCTGCGCCAGATGGTGCAGGCGTCGAAGACGATCGGCAACACGGATC]
[+] EMBL BX466335 [AGGCAAGAATCGGNCGAGGTGATTAAGCTGGAGCTGGAGAAGGAGCTGCGCAACGAGAAGAATGCGCTGCGTGAAGCGCGCAGCCTGCTGCAGATGAGCGAGCTGAAGCACCGGAAGCGGGTGCTGCGACGATTGGGCTACTGTACGGCGGCGGACGTGATCGAGTTCAAGGGGCGCGTAGCGTGCGAGCTGAGCTGCGCGGACGAGCTGCTCATCACCGAGATGGTGTTTAACGGTACGTTTACCGACCTGACGCCGTCGCAATCGTGCGCCCTGCTGAGCTGCTTCGTGTGCGATGAGAAGAGCAGCGAAATGCCGGCAGCGACCCACGAGCTGTCCGGTCCGCTGCGACAGATGCAGGATCTGGCGCGGCGCATTGCGAAGGTGTCGAACGAGTGCAAGGTGGAGGTGGACGAGGAGCGCTACGTGGAATCGTTCAAACCGTTCCTGATGGATGTGGTACTGTGCTAGGTGCAAGGGCGCCTCGTTCGCGCAGCTCTGCAAGATGACGGACATCTTCGAGGGCTCCAGTCATTCGCTGTATGCGCCGGCTGGAGGAGCTGCTGCGCCAGATGGTGCAGGCGTCGAAGACGATCGGCAACACGGATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2068#0 AGGCAAGAATCGCCCGAGGTTATCGTGTCGCGCATTAGCTCGCTGCGTGTTTACTACCNG 60
consensus_2068#1 ------------------------------------------------------------
consensus_2068#0 AACGATCTGCGCCCGGCAGACAATCGCCGCTCGGTGCTGAAAACGATCGAGGAGGTGAAG 120
consensus_2068#1 ------------------------------------------------------------
consensus_2068#0 AAGCGTTTCCCGCAGGGTACCGCCACTGCTGAACCCGATCACCGATATGCACATCAAGGA 180
consensus_2068#1 ------------------------------------------------------------
consensus_2068#0 GAAGGAGTTCCAGGGCATAGTGGACATGATCGACAAGTTCGAGAAGCGCCTGTTCGCCAC 240
consensus_2068#1 ------------------------------------------------------------
consensus_2068#0 CCGTGCACGAGTCGGCCGGGCTCGAGCGGCTGTACGCGCAGTACATGAGCAAGCTGGAGC 300
consensus_2068#1 --------------------------AGGCAAGAATCGGNCGAGGTGATTAAGCTGGAGC 34
*** * ** * *** **********
consensus_2068#0 TGGAGAAGGAGCTGCGCAACGAGNAAGAATGCGCTGCGTGAAGCGCGCAGCCTGCTGCAG 360
consensus_2068#1 TGGAGAAGGAGCTGCGCAACGAGAA-GAATGCGCTGCGTGAAGCGCGCAGCCTGCTGCAG 93
*********************** * **********************************
consensus_2068#0 ATGAGCGAGCTGAAGCACCGGAAGCGGGTGCTGCGACGATTGGGCTACTGTACGGCGGCG 420
consensus_2068#1 ATGAGCGAGCTGAAGCACCGGAAGCGGGTGCTGCGACGATTGGGCTACTGTACGGCGGCG 153
************************************************************
consensus_2068#0 GACGTGATCGAGTTCAAGGGGCGCGTTGCGTGCGAGCTGAGCTGCGCGGACGAGCTGCTC 480
consensus_2068#1 GACGTGATCGAGTTCAAGGGGCGCGTAGCGTGCGAGCTGAGCTGCGCGGACGAGCTGCTC 213
************************** *********************************
consensus_2068#0 ATCACCGACAATGGTGTTTAACGGTACGTTTACCGACCTGACGCCGTCGCAATCGTGCGC 540
consensus_2068#1 ATCACCGA-GATGGTGTTTAACGGTACGTTTACCGACCTGACGCCGTCGCAATCGTGCGC 272
******** **************************************************
consensus_2068#0 CCTGCTGAGCTGCATTCAGTGTGCGATGAGAAGAGCAGCGAAATGCCGGCCAGCAGACCC 600
consensus_2068#1 CCTGCTGAGCTGCTTC--GTGTGCGATGAGAAGAGCAGCGAAATGCCGGC-AGC-GACCC 328
************* * ******************************** *** *****
consensus_2068#0 AAGAGCATGTCCGGTCCGCATGCGACAGAATGCAGGATC--------------------- 639
consensus_2068#1 ACGAGC-TGTCCGGTCCGC-TGCGACAGA-TGCAGGATCTGGCGCGGCGCATTGCGAAGG 385
* **** ************ ********* *********
consensus_2068#0 ------------------------------------------------------------
consensus_2068#1 TGTCGAACGAGTGCAAGGTGGAGGTGGACGAGGAGCGCTACGTGGAATCGTTCAAACCGT 445
consensus_2068#0 ------------------------------------------------------------
consensus_2068#1 TCCTGATGGATGTGGTACTGTGCTAGGTGCAAGGGCGCCTCGTTCGCGCAGCTCTGCAAG 505
consensus_2068#0 ------------------------------------------------------------
consensus_2068#1 ATGACGGACATCTTCGAGGGCTCCAGTCATTCGCTGTATGCGCCGGCTGGAGGAGCTGCT 565
consensus_2068#0 --------------------------------------------
consensus_2068#1 GCGCCAGATGGTGCAGGCGTCGAAGACGATCGGCAACACGGATC 609
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||