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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2195#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 681 fasta sequence
[CCGCTGGCCAAGAATTTAAGCTTTTAGGCGCGGCCATCAACGTTCAAGTTCGGGGCTGTGTCCGCTAATCTGCCCAAGGCTGGCCCGGTATCCGCACAATCAAAACAGATAGCCGCGACACTGCATCATCCCCGATCAGAAATAGAAATAGCCAGCCGCCGCACACACACACAGTCAATCGACCGATCAACAGCAAGGGAGAAACATTTCCTGTCCGGGTGTGCGTGCGTGTGTGTGCTTTTTTTGTTCGTTTCTCACTCGTTTTTTTGATTTTCGTAACCGTGCAAAAAATGCGCTAGAAGAAAAATCAGCAGTGGAATAAGGGTTAAAAACGAATAAGGCAAAACGAGCCAATTAAAATATCGAACGAAAAAGGGCATCCTTCCTTTCCCGCCCCGAGCGGAGCGGGGCCGGTATTGGAGGGCGAAAAACGCATCTCCTGGAAACGCCCCAGCCTTTGATTGGCAGCCGCACCGCGCCCGAGCAACGATGAAGATCAACGAGAAAAACCTGTGCACGTTCGCGACGACGCCACCGGTCGACCTGGAGGGCTGGCTGAACAAGCGGGGCGAGATGAACAAAAGCTGGCAGCGGCGGTGGTTCGTGCTGAAGGGCAACCTGCTGTTCTACTTCGAGAAGCGCACCGATAAGGAACCGCTCGGCATGATCATCCTTGAGGGC]
[+] EMBL BM600194 [CCGCTGGCCAAGAATTTAAGCTTTTAGGCGCGGCCATCAACGTTCAAGTTCGGGGCTGTGTCCGCTAATCTGCCCAAGGCTGGCCCGGTATCCGCACAATCAAAACAGATAGCCGCGACACTGCATCATCCCCGATCAGAAATAGAAATAGCCAGCCGCCGCACACACACACAGTCAATCGACCGATCAACAGCAAGGGAGAAACATTTCCTGTCCGGGTGTGCGTGCGTGTGTGTGCTTTTTTTGTTCGTTTCTCACTCGTTTTTTTGATTTTCGTAACCGTGCAAAAAATGCGCTAGAAGAAAAATCAGCAGTGGAATAAGGGTTAAAAACGAATAAGGCAAAACGAGCCAATTAAAATATCGAACGAAAAAGGGCATCCTTCCTTTCCCGCCCCGAGCGGAGCGGGGCCGGTATTGGAGGGCGAAAAACGCATCTCCTGGAAACGCCCCAGCCTTTGATTGGCAGCCGCACCGCGCCCGAGCAACGATGAAGATCAACGAGAAAAACCTGTGCACGTTCGCGACGACGCCACCGGTCGACCTGGAGGGCTGGCTGAACAAGCGGGGCGAGATGAACAAAAGCTGGCAGCGGCGGTGGTTCGTGCTGAAGGGCAACCTGCTGTTCTACTTCGAGAAGCGCACCGATAAGGAACCGCTCGGCATGATCATCCTTGAGGGC]
consensusID : consensus_2195#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 634 fasta sequence
[CCGAGTTAACTGGCCAAGAATTTAAGGTAACTGTCGAGCGAGTGTACCGCGCAACAAGAAAAAAAAGATAAATCCCGGCGCGGCCATCAACGTTCAAGTTCGGGGCTGTGTCCGCTAATCTGCCCAAGGCTGGCCCGGTATCCGCACAATCAAAACAGATAGCCGCGACACTGCATCATCCCCGATCAGAAATAGAAATAGCCAGCCGCCGCACACACACACAGTCAATCGACCGATCAACAGCAAGGGAGAAACATTTCCTGTCCGGGTGTGCGTGCGTGTGTGTGCTTTTTTTGTTCGTTTCTCACTCGTTTTTTTGATTTTCGTAACCGTGCAAAAAATGCGCTAGAAGAAAAATCAGCAGTGGAATAAGGGTTAAAAACGAATAAGGCAAAACGAGCCAATTAAAATATCGAACGAAAAAGGGCATCCTTCCTTTCCCGCCCCGAGCGGAGCGGGGCCGGTATTGGAGGGCGAAAAACGCATCTCCTGGAAACGCCCCAGCCTTTGATTGGCAGCCGCACCGCGCCCGAGCAACGATGAAGATCAACGAGAAAAACCTGTGCACGTTCGCGACGACGCCACCGGTCGACCTGGAGGGCTGGCTGAACAAGCGGGGCGAGATGAACAAAAG]
[+] EMBL BM599581 [CCGAGTTAACTGGCCAAGAATTTAAGGTAACTGTCGAGCGAGTGTACCGCGCAACAAGAAAAAAAAGATAAATCCCGGCGCGGCCATCAACGTTCAAGTTCGGGGCTGTGTCCGCTAATCTGCCCAAGGCTGGCCCGGTATCCGCACAATCAAAACAGATAGCCGCGACACTGCATCATCCCCGATCAGAAATAGAAATAGCCAGCCGCCGCACACACACACAGTCAATCGACCGATCAACAGCAAGGGAGAAACATTTCCTGTCCGGGTGTGCGTGCGTGTGTGTGCTTTTTTTGTTCGTTTCTCACTCGTTTTTTTGATTTTCGTAACCGTGCAAAAAATGCGCTAGAAGAAAAATCAGCAGTGGAATAAGGGTTAAAAACGAATAAGGCAAAACGAGCCAATTAAAATATCGAACGAAAAAGGGCATCCTTCCTTTCCCGCCCCGAGCGGAGCGGGGCCGGTATTGGAGGGCGAAAAACGCATCTCCTGGAAACGCCCCAGCCTTTGATTGGCAGCCGCACCGCGCCCGAGCAACGATGAAGATCAACGAGAAAAACCTGTGCACGTTCGCGACGACGCCACCGGTCGACCTGGAGGGCTGGCTGAACAAGCGGGGCGAGATGAACAAAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2195#0 ----------------------------------------------CCGCTGGCCAAGAA 14
consensus_2195#1 CCGAGTTAACTGGCCAAGAATTTAAGGTAACTGTCGAGCGAGTGTACCGCGCAACAAGAA 60
**** ******
consensus_2195#0 TTTAAGCTTTTA----GGCGCGGCCATCAACGTTCAAGTTCGGGGCTGTGTCCGCTAATC 70
consensus_2195#1 AAAAAAGATAAATCCCGGCGCGGCCATCAACGTTCAAGTTCGGGGCTGTGTCCGCTAATC 120
** * * ********************************************
consensus_2195#0 TGCCCAAGGCTGGCCCGGTATCCGCACAATCAAAACAGATAGCCGCGACACTGCATCATC 130
consensus_2195#1 TGCCCAAGGCTGGCCCGGTATCCGCACAATCAAAACAGATAGCCGCGACACTGCATCATC 180
************************************************************
consensus_2195#0 CCCGATCAGAAATAGAAATAGCCAGCCGCCGCACACACACACAGTCAATCGACCGATCAA 190
consensus_2195#1 CCCGATCAGAAATAGAAATAGCCAGCCGCCGCACACACACACAGTCAATCGACCGATCAA 240
************************************************************
consensus_2195#0 CAGCAAGGGAGAAACATTTCCTGTCCGGGTGTGCGTGCGTGTGTGTGCTTTTTTTGTTCG 250
consensus_2195#1 CAGCAAGGGAGAAACATTTCCTGTCCGGGTGTGCGTGCGTGTGTGTGCTTTTTTTGTTCG 300
************************************************************
consensus_2195#0 TTTCTCACTCGTTTTTTTGATTTTCGTAACCGTGCAAAAAATGCGCTAGAAGAAAAATCA 310
consensus_2195#1 TTTCTCACTCGTTTTTTTGATTTTCGTAACCGTGCAAAAAATGCGCTAGAAGAAAAATCA 360
************************************************************
consensus_2195#0 GCAGTGGAATAAGGGTTAAAAACGAATAAGGCAAAACGAGCCAATTAAAATATCGAACGA 370
consensus_2195#1 GCAGTGGAATAAGGGTTAAAAACGAATAAGGCAAAACGAGCCAATTAAAATATCGAACGA 420
************************************************************
consensus_2195#0 AAAAGGGCATCCTTCCTTTCCCGCCCCGAGCGGAGCGGGGCCGGTATTGGAGGGCGAAAA 430
consensus_2195#1 AAAAGGGCATCCTTCCTTTCCCGCCCCGAGCGGAGCGGGGCCGGTATTGGAGGGCGAAAA 480
************************************************************
consensus_2195#0 ACGCATCTCCTGGAAACGCCCCAGCCTTTGATTGGCAGCCGCACCGCGCCCGAGCAACGA 490
consensus_2195#1 ACGCATCTCCTGGAAACGCCCCAGCCTTTGATTGGCAGCCGCACCGCGCCCGAGCAACGA 540
************************************************************
consensus_2195#0 TGAAGATCAACGAGAAAAACCTGTGCACGTTCGCGACGACGCCACCGGTCGACCTGGAGG 550
consensus_2195#1 TGAAGATCAACGAGAAAAACCTGTGCACGTTCGCGACGACGCCACCGGTCGACCTGGAGG 600
************************************************************
consensus_2195#0 GCTGGCTGAACAAGCGGGGCGAGATGAACAAAAGCTGGCAGCGGCGGTGGTTCGTGCTGA 610
consensus_2195#1 GCTGGCTGAACAAGCGGGGCGAGATGAACAAAAG-------------------------- 634
**********************************
consensus_2195#0 AGGGCAACCTGCTGTTCTACTTCGAGAAGCGCACCGATAAGGAACCGCTCGGCATGATCA 670
consensus_2195#1 ------------------------------------------------------------
consensus_2195#0 TCCTTGAGGGC 681
consensus_2195#1 -----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||