cluster # 2255

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 2255 cluster # 2255 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2255#0 length = 830 sequences # 1

consensus_2255#1 length = 619 sequences # 1

consensusID : consensus_2255#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 830
fasta sequence

                              [CGGCGCGGTGTGTTTGTACCTGAGCGCGATGCGGCCTGGGAGCTGGAACCAAACGCGTTCCAGGAGCAGCTGGTTCGGCCGACCGCATGCGACGCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAACTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGTCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGAAAGGATCCGTCGGAAGCCAGTGGACTATCAAAGTCTGGTACCAGCAAGCATTTAAAGACAGACACCAAACCGACCACTGCGCTTGCGTTGAGCGTTGATCGCTCACCGGCTGGGCGGGTGGATGAAACGTCCGGCGCATTCGCAGCTCCTCATCCTGACGTAGTTTCTATTGACTCGACAAGTGAAAGCAGCATAGGCAT]

[+] EMBL BX623546             [CGGCGCGGTGTGTTTGTACCTGAGCGCGATGCGGCCTGGGAGCTGGAACCAAACGCGTTCCAGGAGCAGCTGGTTCGGCCGACCGCATGCGACGCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAACTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGTCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGAAAGGATCCGTCGGAAGCCAGTGGACTATCAAAGTCTGGTACCAGCAAGCATTTAAAGACAGACACCAAACCGACCACTGCGCTTGCGTTGAGCGTTGATCGCTCACCGGCTGGGCGGGTGGATGAAACGTCCGGCGCATTCGCAGCTCCTCATCCTGACGTAGTTTCTATTGACTCGACAAGTGAAAGCAGCATAGGCAT]




>consensus_2255#0
CGGCGCGGTGTGTTTGTACCTGAGCGCGATGCGGCCTGGGAGCTGGAACCAAACGCGTTC
CAGGAGCAGCTGGTTCGGCCGACCGCATGCGACGCGGAAGATTGTAAATGCGAGCAAGGG
CGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGC
CGCCACCGGCAGTGCATGGAGGCGACGCCCGAACTGACGCGTGCCTACGTGTGCCAGCTG
TGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGC
GAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGC
CCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCG
AGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCG
TCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTG
CAGCAGAACACGGGAAAGCGTGTGCGTCGACTGCTGTCCGATGAATCGGACGAGGGAACT
AGCAATCCCATGGGCGTGGAGGAGGATGGAAAGGATCCGTCGGAAGCCAGTGGACTATCA
AAGTCTGGTACCAGCAAGCATTTAAAGACAGACACCAAACCGACCACTGCGCTTGCGTTG
AGCGTTGATCGCTCACCGGCTGGGCGGGTGGATGAAACGTCCGGCGCATTCGCAGCTCCT
CATCCTGACGTAGTTTCTATTGACTCGACAAGTGAAAGCAGCATAGGCAT

consensusID : consensus_2255#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence

                              [CCGCCCACGCGTCCGCGATGCGGCCTGGGAGCTGGAACCGAACGCGTTCCAGGAGCAGCTGGTGCGGCCGACTGCATGCGACTCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAGCTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGGCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGA]

[+] EMBL BM599066             [CCGCCCACGCGTCCGCGATGCGGCCTGGGAGCTGGAACCGAACGCGTTCCAGGAGCAGCTGGTGCGGCCGACTGCATGCGACTCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCAGTGCATGGAGGCGACGCCCGAGCTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACACGGGAAAGCGTGTGCGGCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCATGGGCGTGGAGGAGGATGGA]




>consensus_2255#1
CCGCCCACGCGTCCGCGATGCGGCCTGGGAGCTGGAACCGAACGCGTTCCAGGAGCAGCT
GGTGCGGCCGACTGCATGCGACTCGGAAGATTGTAAATGCGAGCAAGGGCGCAGCGTGGA
CAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGCCGCCACCGGCA
GTGCATGGAGGCGACGCCCGAGCTGACGCGTGCCTACGTGTGCCAGCTGTGTCGGCCGAT
TCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGCGAGGATGAGAC
GGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGCCCGGCTAAAGA
GCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCGAGCGACGAAGC
GCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCGTCGGACGGCTC
GGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTGCAGCAGAACAC
GGGAAAGCGTGTGCGGCGACTGCTGTCCGATGAATCGGACGAGGGAACTAGCAATCCCAT
GGGCGTGGAGGAGGATGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2255#0      CGGCGCGGTGTGTTTGTACCTGAGCGCGATGCGGCCTGGGAGCTGGAACCAAACGCGTTC 60
consensus_2255#1      -----------CCGCCCACGCGTCCGCGATGCGGCCTGGGAGCTGGAACCGAACGCGTTC 49
                                       **  *  ************************** *********

consensus_2255#0      CAGGAGCAGCTGGTTCGGCCGACCGCATGCGACGCGGAAGATTGTAAATGCGAGCAAGGG 120
consensus_2255#1      CAGGAGCAGCTGGTGCGGCCGACTGCATGCGACTCGGAAGATTGTAAATGCGAGCAAGGG 109
                      ************** ******** ********* **************************

consensus_2255#0      CGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGC 180
consensus_2255#1      CGCAGCGTGGACAGCCACGAGTGGCGGCTGGTGATATGTGGGTCGTGCGGCTCCACCTGC 169
                      ************************************************************

consensus_2255#0      CGCCACCGGCAGTGCATGGAGGCGACGCCCGAACTGACGCGTGCCTACGTGTGCCAGCTG 240
consensus_2255#1      CGCCACCGGCAGTGCATGGAGGCGACGCCCGAGCTGACGCGTGCCTACGTGTGCCAGCTG 229
                      ******************************** ***************************

consensus_2255#0      TGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGC 300
consensus_2255#1      TGTCGGCCGATTCTTGGCGAGCGAGTATCGCTGGTCGAGGATAGCGACGACGATAGTAGC 289
                      ************************************************************

consensus_2255#0      GAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGC 360
consensus_2255#1      GAGGATGAGACGGTAGCGTCTGGTTCGTCCAGTTCCGCGTCCCAGTTCGACAAAGTGCGC 349
                      ************************************************************

consensus_2255#0      CCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCG 420
consensus_2255#1      CCGGCTAAAGAGCTGTCGAGGCCGGGTTCGGGCGAGTCGGGCGTACACTGCTCAAGCTCG 409
                      ************************************************************

consensus_2255#0      AGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCG 480
consensus_2255#1      AGCGACGAAGCGCTGGTCGCCGTCTGCCGGCGAGCTCGCCGAAATGTGGCTACCATTGCG 469
                      ************************************************************

consensus_2255#0      TCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTG 540
consensus_2255#1      TCGGACGGCTCGGACAGTGAGCATTCCGATGCTAGCTCCGTGCAGTTAAGACGCTTCGTG 529
                      ************************************************************

consensus_2255#0      CAGCAGAACACGGGAAAGCGTGTGCGTCGACTGCTGTCCGATGAATCGGACGAGGGAACT 600
consensus_2255#1      CAGCAGAACACGGGAAAGCGTGTGCGGCGACTGCTGTCCGATGAATCGGACGAGGGAACT 589
                      ************************** *********************************

consensus_2255#0      AGCAATCCCATGGGCGTGGAGGAGGATGGAAAGGATCCGTCGGAAGCCAGTGGACTATCA 660
consensus_2255#1      AGCAATCCCATGGGCGTGGAGGAGGATGGA------------------------------ 619
                      ******************************                              

consensus_2255#0      AAGTCTGGTACCAGCAAGCATTTAAAGACAGACACCAAACCGACCACTGCGCTTGCGTTG 720
consensus_2255#1      ------------------------------------------------------------
                                                                                  

consensus_2255#0      AGCGTTGATCGCTCACCGGCTGGGCGGGTGGATGAAACGTCCGGCGCATTCGCAGCTCCT 780
consensus_2255#1      ------------------------------------------------------------
                                                                                  

consensus_2255#0      CATCCTGACGTAGTTTCTATTGACTCGACAAGTGAAAGCAGCATAGGCAT 830
consensus_2255#1      --------------------------------------------------