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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 925 fasta sequence
[GCAGATCCCCCGAGGTTAAATATGTACATCCAGCAGCAGGCCAACGCAACGGCGGAAGCGAAGCAACGCAGCAGCAGCCTCAGCAGCAACCGCAGCAGCGTCACCATTCGAGCGAAGACAACCGTCCCGTGATCTGACGTTAGCATCCAGAAACCTGAGCTGCCAAAGGTGACGGTGGCAATGGCTGCCACCAGCCGGTGGTGCAAATAATCTGCTCGAAACCTCGCCGAATAAAGGGGGGGAAAAGCAGCCTACAAGAGGCATAGCAAGCAGTACTCCTCCTCCGTGTCGAATGAGGAGGAACAATAAGGCACGTTTTTGCACTTAACTTCATTCATACGTTCCATACTTGTGTGTCCCCCCATATATATTTGTTCGTCCATACAATCATTTCCATTTCATTTAAATGCGTCGACGGTTNTAGTTAACTTCATGACAGCAGGGTTTAGAGTTTGTCAACCTGCTGCAGCAGACTGCGTTCATCACAGTTGTCAGTGGACAGCAAGAAGCAGTGGCACACCGAGAAGTGCAATGCGTTTCAGAGGTTCAAGTTAGTNTGTGAGCGAATTTTACACGCAATTTCNCATAATGAAGCGAACGTNCTGTGCAGAACATGACATACATACACACCATATCGTTCTAAGATTTCCTAAGCTCTGACTTTTACGAGTGAAACCCCCGCAAATGGATCGGGAGATTGCTANGTCTGGGATAAATTATANAACATAGTACTANNNGTATACAGGGTACGAATTGACACANTATCAGGAAACGTATGAGAGACAGCCGCGAAAAAAACAAAACAACCAAACCAGGCNNTGTATGCGGACCGNACAAGCTCTATTCCCCATNATAANATGAGGGGTNAATTCATAAAGCATTGGACACTGGCCGTACGATATNCAACAACNGTCAGATGACTGNG]
[+] EMBL AL930358 [GCAGATCCCCCGAGGTTAAATATGTACATCCAGCAGCAGGCCAACGCAACGGCGGAAGCGAAGCAACGCAGCAGCAGCCTCAGCAGCAACCGCAGCAGCGTCACCATTCGAGCGAAGACAACCGTCCCGTGATCTGACGTTAGCATCCAGAAACCTGAGCTGCCAAAGGTGACGGTGGCAATGGCTGCCACCAGCCGGTGGTGCAAATAATCTGCTCGAAACCTCGCCGAATAAAGGGGGGGAAAAGCAGCCTACAAGAGGCATAGCAAGCAGTACTCCTCCTCCGTGTCGAATGAGGAGGAACAATAAGGCACGTTTTTGCACTTAACTTCATTCATACGTTCCATACTTGTGTGTCCCCCCATATATATTTGTTCGTCCATACAATCATTTCCATTTCATTTAAATGCGTCGACGGTTNTAGTTAACTTCATGACAGCAGGGTTTAGAGTTTGTCAACCTGCTGCAGCAGACTGCGTTCATCACAGTTGTCAGTGGACAGCAAGAAGCAGTGGCACACCGAGAAGTGCAATGCGTTTCAGAGGTTCAAGTTAGTNTGTGAGCGAATTTTACACGCAATTTCNCATAATGAAGCGAACGTNCTGTGCAGAACATGACATACATACACACCATATCGTTCTAAGATTTCCTAAGCTCTGACTTTTACGAGTGAAACCCCCGCAAATGGATCGGGAGATTGCTANGTCTGGGATAAATTATANAACATAGTACTANNNGTATACAGGGTACGAATTGACACANTATCAGGAAACGTATGAGAGACAGCCGCGAAAAAAACAAAACAACCAAACCAGGCNNTGTATGCGGACCGNACAAGCTCTATTCCCCATNATAANATGAGGGGTNAATTCATAAAGCATTGGACACTGGCCGTACGATATNCAACAACNGTCAGATGACTGNG]
consensusID : consensus_2461#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 702 fasta sequence
[CCGCTCTACCAGTGCAGCGAAAATCGGTGAAACTAGCGACACCGAAAGTGCCGAAGTGAAGCAACCGATGACGAAAACCCAGCGCCTGAAGAACATTTTCGCCAAACGCTTGCAGCGTGGAGGTGGTGCCGGAACGAACGAACTGCCTGAAGAGATCGTCACCACCCCGGACGTAGCGGCCGTCGACGAGCAGGACACGAAGCCGTCCGATGGAGCGGGTAAACCGGCAAAGGACGATCAAACGCTGGTGTACGCCGAGCTGGAGCTAAAACCGGCCGCCGGGGAGATCTCGTTCGTCAACAAACCGCCAGCCGCCGTCAGCAACGAGTCGACCGAGTATGCCGAAATTATGTACATCCAGCAGCAGGCCAACGCAACGGCCGGAAGCGAAGCAACGCAGCAGCAGCCTCAGCAGCAACCGCAGCAGCGTCACCATTCGAGCGAAGACAACCGTCCCGTGATCGACGTTAGCATCCAGAAACCGAGCGCCAAAGGTGACGGTGGCAAGGCGCCACCAGCCGGGGGCAAATAATCTGCTCGAAACCTCGCCGAATAAAGGGGGGGAAAAGCAGCCTACAAGAGGCATAGCAAGCAGTACTCCTCCTCCGTGTCGAATGAGGAGGAACAATAAGGCACGTTTTGCACTTAACTTCATTCATCGTTCCATACTGTGTGTCCCCCCATTTTTTGTTCGTCATACAA]
[+] EMBL BM620343 [CCGCTCTACCAGTGCAGCGAAAATCGGTGAAACTAGCGACACCGAAAGTGCCGAAGTGAAGCAACCGATGACGAAAACCCAGCGCCTGAAGAACATTTTCGCCAAACGCTTGCAGCGTGGAGGTGGTGCCGGAACGAACGAACTGCCTGAAGAGATCGTCACCACCCCGGACGTAGCGGCCGTCGACGAGCAGGACACGAAGCCGTCCGATGGAGCGGGTAAACCGGCAAAGGACGATCAAACGCTGGTGTACGCCGAGCTGGAGCTAAAACCGGCCGCCGGGGAGATCTCGTTCGTCAACAAACCGCCAGCCGCCGTCAGCAACGAGTCGACCGAGTATGCCGAAATTATGTACATCCAGCAGCAGGCCAACGCAACGGCCGGAAGCGAAGCAACGCAGCAGCAGCCTCAGCAGCAACCGCAGCAGCGTCACCATTCGAGCGAAGACAACCGTCCCGTGATCGACGTTAGCATCCAGAAACCGAGCGCCAAAGGTGACGGTGGCAAGGCGCCACCAGCCGGGGGCAAATAATCTGCTCGAAACCTCGCCGAATAAAGGGGGGGAAAAGCAGCCTACAAGAGGCATAGCAAGCAGTACTCCTCCTCCGTGTCGAATGAGGAGGAACAATAAGGCACGTTTTGCACTTAACTTCATTCATCGTTCCATACTGTGTGTCCCCCCATTTTTTGTTCGTCATACAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2461#0 GCAGATCCCCCGAGGTTAAATATGTACATCCAGCAGCAGGCCAACGCAACGGCGGAAGCG 60
consensus_2461#1 ------------------------------------------------------CCGCTC 6
consensus_2461#0 AAGCAACGCAGCAGCAGCCTCAGCAGCAACCGCAGCAGCGTCACCATTCGAGCGAAGACA 120
consensus_2461#1 TACCAGTGCAGCGAAAA--TCGGTGAAACTAGCGACACCGAAAGTGCCGAAGTGAAG-CA 63
* ** ***** * ** * * ** ** ** * ** **** **
consensus_2461#0 ACCGTCCCGTGATCTGACGTTAGCATCCAGAAACCTGAGCTGCCAAAGGTGACGGTGGCA 180
consensus_2461#1 ACCG----ATGACGAAAACCCAGCGCCTGAAGAACATTTTCGCCAAA-----CGCTTGCA 114
**** *** * *** * * * * ****** ** * ***
consensus_2461#0 ATGGCTGCCACCAGCCGGTGGTGCAAATAATCTGCTCGAA-ACCTCGCCGAATAAAGGGG 239
consensus_2461#1 GCG--TGGAGGTGGT-GCCGGAACGAACGAACTGCCTGAAGAGATCGTCACCACCCCGGA 171
* ** * * ** * ** * **** *** * *** * **
consensus_2461#0 GGGAAAAGCAGCCTACAAGAGGCATAGCAAGCAGTACTCCTCCTCCGTGTCGAATGAGGA 299
consensus_2461#1 CGTAGCGGCCGTCGACGAGCAGGACACGAAGCCGTCC-----------GATGGAGCGGGT 220
* * ** * * ** ** * * * **** ** * * * * **
consensus_2461#0 GGAACAATAAGGCACGTTTTTGCACTTAACTTCATTCATACGTTCCATACTTGTGTGTCC 359
consensus_2461#1 AAACCGGCAAAGGACGATCAAACGCTGG--------TGTACG--CCGAGCTGGAGC---- 266
* * ** * *** * * ** **** ** ** * *
consensus_2461#0 CCCCATATATATTTGTTCGTCCATACAATCATTTCCATTTCATTTAAATGCGTCGACGGT 419
consensus_2461#1 -------TAAAACCGGCCGCCGGGGAGATCTCGTTCGTC-------AACAAACCGCCAGC 312
** * * ** * *** * * * ** ** * *
consensus_2461#0 TNTAGTTAACTTCATGACAGCAGGGTTTA--GAGTTTGTCAACCTGCTGCAGCAGACTGC 477
consensus_2461#1 CGCCGTCAGCAACGAGTCGACCGAGTATGCCGAAATTATGTACATCCAGCAGCAGGC--- 369
** * * * * * * * ** * ** ** * ** * * ******* *
consensus_2461#0 GTTCATCACAGTTGTCAGTGGACAGCAAGAAGCAGTGGCACACCGAGAAGTGCAATGCGT 537
consensus_2461#1 ---CAACGCAACGGCCGG-AAGCGAAGCAACGCAGCAGCAGCCTCAGCAGCA------AC 419
** * ** * * * * * **** *** * ** **
consensus_2461#0 TTCAGAGGTTCAAGTTAGTNTGTGAGCGAATTTTACACGCAATTTCNCATAAT-GAAGCG 596
consensus_2461#1 CGCAGCAGC----GTCACCATTCGAGCGAAGACAAC------CGTCCCGTGATCGACGTT 469
*** * ** * * ******* ** ** * * ** ** *
consensus_2461#0 AACGTNCTGTG-CAGAACATGACATACATACACACCATATCGTTCTAAGATTTCCTAAGC 655
consensus_2461#1 AGCATCCAGAAACCGAGCGCCAAAGGTGACGGTGGCAAGGCGCCACCAG-----CCGGGG 524
* * * * * * ** * * * ** ** ** * *
consensus_2461#0 TCTGACTTTTACGAGTGAAACCCCCGCAAATGGATCGGGAGATTGCTANGTCTGGGATAA 715
consensus_2461#1 GCAAA-TAATCTGCTCGAAACCTCGCCGAATAAAGGGGGGGAAAAGCAG--CCTACAAGA 581
* * * * * ****** * * *** * *** ** * * * *
consensus_2461#0 ATTATANAACATAGTACTANNNGTATACAGGGTACGAATTGACACANTATCAGGAAACGT 775
consensus_2461#1 GGCATAGCAAGCAGTACTCCTCCTCCGTGTCGAATGAGGAGGAACAATA---AGGCACGT 638
*** * ****** * * * ** * *** ** * ****
consensus_2461#0 ATGAGAGACAGCCGCGAAAAAAACAAAACAACCAAACCAGGCNNTGTATGCGGACCGNAC 835
consensus_2461#1 TTTGCACTTAACTTC-----------ATTCATCGTTCCATACTGTGTGT-----CCCCCC 682
* * * * * * * * *** * *** * ** *
consensus_2461#0 AAGCTCTATTCCCCATNATAANATGAGGGGTNAATTCATAAAGCATTGGACACTGGCCGT 895
consensus_2461#1 ATTTTTTGTTCGTCATACAA---------------------------------------- 702
* * * *** *** *
consensus_2461#0 ACGATATNCAACAACNGTCAGATGACTGNG 925
consensus_2461#1 ------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||