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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2584#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 655 fasta sequence
[CTGCCGCCAGCTTGCCGAGGTGGCGGCCAACTTTGTCCACAGCAACTTTCCGAAGGTCGCCCTCGAGGACGAACTGCTCGACATTCCGCACACGCTGCTGGTGAAGGTGATCGCCTCCGAGGCGCTGCGGGTCGACAGCGAGTATCAGGTGTTTAATGCCGCGCTGCGCTGGATCCGACACGATGTGGTGCCGCGCCGCCAGTACGTGTTTGAAATTTTGTCCCACGTGCGCATCGCTCTAGTGCCGGTAGGGCTAATCGATCAGGCCATCGCCGAGTGCCGGGATGTGTCGCTCAAGATAGCGCTCCGCTCGGTGCGCAAGGATCTGACATCGCGCCGCGGTCAGCTCGTGCCGTTGCGCGTGTGCCCGCGAGTTTGTGCGAAGAAGAGCATCTACGTGATTGGCGGATCGCGGCGAGAACGGTCGACCGGATGGACGCCAACGGATTGGATCTTTGAGTCCGTCATCAAGTATGACATCTTTCGGCACGAGTGGATCGAATCGGCCCCGATGGAGATCGGCCGCATACTGCCAGGGGTGGCCGCACTCGGTGGCAAGATTTACGTGATCGGTGGCGAGCGCGGCAGCCAGATCCTGGCGAACGGGGAGGTGTACGACACACAGAACAACAACTGGGAACCGATGGCACCGATG]
[+] EMBL BX620171 [CTGCCGCCAGCTTGCCGAGGTGGCGGCCAACTTTGTCCACAGCAACTTTCCGAAGGTCGCCCTCGAGGACGAACTGCTCGACATTCCGCACACGCTGCTGGTGAAGGTGATCGCCTCCGAGGCGCTGCGGGTCGACAGCGAGTATCAGGTGTTTAATGCCGCGCTGCGCTGGATCCGACACGATGTGGTGCCGCGCCGCCAGTACGTGTTTGAAATTTTGTCCCACGTGCGCATCGCTCTAGTGCCGGTAGGGCTAATCGATCAGGCCATCGCCGAGTGCCGGGATGTGTCGCTCAAGATAGCGCTCCGCTCGGTGCGCAAGGATCTGACATCGCGCCGCGGTCAGCTCGTGCCGTTGCGCGTGTGCCCGCGAGTTTGTGCGAAGAAGAGCATCTACGTGATTGGCGGATCGCGGCGAGAACGGTCGACCGGATGGACGCCAACGGATTGGATCTTTGAGTCCGTCATCAAGTATGACATCTTTCGGCACGAGTGGATCGAATCGGCCCCGATGGAGATCGGCCGCATACTGCCAGGGGTGGCCGCACTCGGTGGCAAGATTTACGTGATCGGTGGCGAGCGCGGCAGCCAGATCCTGGCGAACGGGGAGGTGTACGACACACAGAACAACAACTGGGAACCGATGGCACCGATG]
consensusID : consensus_2584#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCGAGTGGATCGAATCGGCCCCGATGGAGATCGGCCGCATCCTGCCAGGGGTGGCCGCACTCGGTGGCAAGATTTACGTGATCGGTGGCGAGCGCGGCAGCCAGATCCTGGCGAACGGGGAGGTGTACGACACACAGAACAACAACTGGGAACCGATGGCACCGATGAATGTGCCCCGGTGCGAGTTTGGGCTCTGTACGCTCGGCGGCACGCTGTACGCGATGGGCGGCTGGATCGGGGAGGACATTGGCGGCTCGATTGAGTGTTACGATCCGATGAAAAATGCGTGGCGAATGGTAGGCGATCTGCCGGAACCCAAGTTCAGTATGGGTGTCGTAAGCTTCGAAGGCTTGATATACATTGTCGGTGGCTGCAATACTCACTCGAGATATCTAACCGATCTGATCAGCTACAATCCCGTTACGCATGAATGGACGAAGCTCGCCCGAATGCAAACCGCTCGCTGCCAGATGGGGGTAGCCATTCTCGACCGCCATCTGTACGTGGTCGGTGGCAACAGCAGCCCAGCAGGAAGTGCTACGCACAGTCGAACGCTACAGCTTCGACGAGGACAAGTGGTCAATGGTTTCGC]
[+] EMBL BM576992 [CCGCGGACGCGTGGGCGGACGCGTGGGCGAGTGGATCGAATCGGCCCCGATGGAGATCGGCCGCATCCTGCCAGGGGTGGCCGCACTCGGTGGCAAGATTTACGTGATCGGTGGCGAGCGCGGCAGCCAGATCCTGGCGAACGGGGAGGTGTACGACACACAGAACAACAACTGGGAACCGATGGCACCGATGAATGTGCCCCGGTGCGAGTTTGGGCTCTGTACGCTCGGCGGCACGCTGTACGCGATGGGCGGCTGGATCGGGGAGGACATTGGCGGCTCGATTGAGTGTTACGATCCGATGAAAAATGCGTGGCGAATGGTAGGCGATCTGCCGGAACCCAAGTTCAGTATGGGTGTCGTAAGCTTCGAAGGCTTGATATACATTGTCGGTGGCTGCAATACTCACTCGAGATATCTAACCGATCTGATCAGCTACAATCCCGTTACGCATGAATGGACGAAGCTCGCCCGAATGCAAACCGCTCGCTGCCAGATGGGGGTAGCCATTCTCGACCGCCATCTGTACGTGGTCGGTGGCAACAGCAGCCCAGCAGGAAGTGCTACGCACAGTCGAACGCTACAGCTTCGACGAGGACAAGTGGTCAATGGTTTCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2584#0 CTGCCGCCAGCTTGCCGAGGTGGCGGCCAACTTTGTCCACAGCAACTTTCCGAAGGTCGC 60
consensus_2584#1 CCGCGGACGCGTGGGCGGACGCGTGGGCGAGTGGATCGAATCGGCCCCGATGGAGATCGG 60
* ** * * * * ** * ** * * * ** * * * ** ***
consensus_2584#0 CCTCGAGGACGAACTGCTCGACATT-CCGCACACGCTGCT--GGTGAAGGTGATCGCCTC 117
consensus_2584#1 CC------GCATCCTGCCAGGGGTGGCCGCACTCGGTGGCAAGATTTACGTGATCGGTGG 114
** * **** * * ****** ** ** * * * *******
consensus_2584#0 CGAGGCGCTGCGGGTCGACAGCGA-GTATCAGGTGTTTAATGCCGCGCTGCGCTGGATCC 176
consensus_2584#1 CGAG-CGCGGCAGCCAGATCCTGGCGAACGGGGAGGTGTACGACACACAGAACAACAACT 173
**** *** ** * ** * * * ** * * * * * * * * * * *
consensus_2584#0 GACACGATGTGGTGCCGCGCCGCCAGTACGTGTTTGAAATTTTGTCCCACGTGCGCATCG 236
consensus_2584#1 GGGAACCGATGGCACCG--ATGAATGTGCCCCGGTGCGAGTTTGGGCTCTGTACGC-TCG 230
* * *** *** * ** * ** * **** * ** *** ***
consensus_2584#0 CTCTAGTGCCGGTAGGGCTAATCGATCAGGCCATCGCCGAGTGCCGGGATGTGTCGCTCA 296
consensus_2584#1 GCGGCACGCTGTACGCGATGGGCGGCTGG---ATCGGGGAGGACATTGGCGGCTCGATTG 287
** * * * * ** * **** *** * * * *** *
consensus_2584#0 AG-ATAGCGCTCCGCTCGG---TGCGCAAGGATCTGACATCGCGCCGCGGTCAGCTCGTG 352
consensus_2584#1 AGTGTTACGATCCGATGAAAAATGCGTGGCGAATGGTAGGCGATCTGCCGGAACCCAAGT 347
** * ** **** * **** ** * ** * ** * * *
consensus_2584#0 CCGTTGCGCGTGTGCCCGCGAGTTTGTGCGAAGAAGAGCATCTACGTGATTGGCGGATCG 412
consensus_2584#1 TCAGTATGGGTGT---CGTAAGCTT---CGAAGGCTTG-ATATACATTGTCGGTGGCT-- 398
* * * **** ** ** ** ***** * ** *** * * ** ** *
consensus_2584#0 CGGCGAGAACGGTCGACCGGATGGACGCCAACGGATTGGATCTTTGAGTCCGTCATCAAG 472
consensus_2584#1 -----GCAATACTCACTCGA--GATATCTAACCGATCTGATC---------------AGC 436
** ** ** * * *** *** **** *
consensus_2584#0 TATGACATCTTTCGGCACGAGTGGATCGAATCGGCCCCGATGGAGATCGGCCGCATACTG 532
consensus_2584#1 TACAATCCCGTTACGCATGAATGGACGAAGCTCGCCCGAATGCAAACCGCTCGCTGCCAG 496
** * * ** *** ** **** * **** *** * * ** *** * *
consensus_2584#0 CCAGGGGTGGCCGCACTCGGTGGCAAGATTTACGTGATCGGTGGCGAGCGCGGCA-GCCA 591
consensus_2584#1 ATGGGGGTAGCCATTCTCGACCGCCATCTGTACGTGGTCGGTGGCAACAGCAGCCCAGCA 556
***** *** **** ** * * ****** ******** * ** ** **
consensus_2584#0 GATCCTGGCGAACGGGGAGGTGTACGACACACAGAACAACAACTGGGAACCGATGGCACC 651
consensus_2584#1 GGAAGTGCTACGCACAGTCGAACGCTACAGCTTCGACGAGGACAAGTGGTCAATGGTTTC 616
* ** * * * * *** ** * ** * * **** *
consensus_2584#0 GATG 655
consensus_2584#1 GC-- 618
*
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||